Lsi03G008600 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi03G008600
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionProtein IQ-DOMAIN 1
Locationchr03 : 14171976 .. 14177389 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTCCCTTCACTGCCCTACTGCCGAAGCGTTCTCGTTTCGTGCAAAGCTTTGTTTCATTTCGTCTTCGTTCTGTTTCATTTCGTCTTTGTTTCATTGATCTTGACCTTCCCGCAGCATTCACGCTGCCGCCGCCCAAGCTTTTGATTCGTCTCAGCTTTGTTTTGTCTTCAAAAGTTTGTTAGGGTTCAGAGGTTTGTTAGTTTGCGTTCGTCTGTTGTTGGCTTAAGGTTGTCCGCGTCCAGTAATATGAGATTTATTTTGATTTCTATTTTTGTTGTTTGCCTTCATTTTTTTTGTGTGTCTAATTTTGATTCCATACTAGTCTGCCACAAAGTGCTCTTGCACCACTTCTTGTTCGACCAGCAGCGATATTGTCTTCTTCTCTGTCTTTGACCAATAAGAAGTTGTCATATCTGGAGGATGAAAGGGTGATTGCCCACCGTGAGAATGGAGCTTTAGATTACGATCGGTTCGATGGTACAAAGATGATTATTCTAGGTATTCATGGTTGTGTATGTGTGTGTTTTTGGGATTGGAGTTTTTATTTTGTTTTTGTTCTTACCCACAATATTTTTAAAGACTGAAAATGGTGATTGCTTGTTTGTGTTTTACCGGAGAAGTTGGGTAGTACTAAAACTAAGAAATGGAGGCTATGGAGAAGCCCATCAGGGGATTTGACCCCTGCTTGGAAGGGTTATAAAGTGGGATACAAAGCAGCTTCTGAAGGATCTGATTCTCCTAGAGTGGCTGATTCTTTTACCGCTGTCGTCGCCACCATCCTCCGTGCTGCACCAAGGAATTTCAGGGTTGTCCACCAAGAATGGGCTGCAATTAGGATCCAAATTGCATTTCGTGGTTTCTTGGTACACCTCTTTGTTCTAGGATCCAAATTGCATTTCGTGGTTTCTTGGTACACCTCTTTGTTCTTCATACTAATAAGTTTCTAACTGTTTGATGTGAAACTTGTTTAGTCTTTGAAAAAGTTTCTTTGGTTAGATTAGTTTCACTTTCACTTCAAATGGCTGCTTGTTTTGAGTCTCTAAATTAGCTTTTTAGTCTTTTTCAGGTTTCTTGTGAGGGGGTCTTTACATTTTGATGCAAATTTAATGAAAACTCACATGAGTTTGAGTGTGTAAGGGTTGATAACGTTTTTTAGTCTCTTTTGTGTCCTTGTGAAGAACTCTTATTGAGCTATCGAGGATTTAATGCTCTTTTCTTTTAAAAAAAATGTGTATTGAAGAACCAAATGACTGATGAATATGGAGGAAGAGATGTTAAATAAATTGAATCACAACGCTTCCTGTCTATTTGAATAGAAAAGGAAGAAAGAATGGTAGAATAACTCTTCTTCATAGTTTCCATTTCTTTTTGTTCCTTTTTTTTTTACATACCTCACCCACCTTATTTGGGAACGCCTTAGTAATATTTTTAGGGAGTTGTCTCCATACTTTATTCCTATTTTTAAATCTCAACGCTAGATATAATCTGTGATTTGCAGATAATTACAACATCGACCATATTGCAGCACAAGTCAATACTTGGTGAATGAAACCTTGTATCAAGGTATTGCCAAGCTCACGTGACATTATTTTAAGATTGTATTTATGTATATTCATATTTTATGCTTTTCAAGTTATTCATAATTGATAGCATGTTCTTTGAATAAAATACCATAAATATATTAGTAACTAGGACTACTTACAACTTCTACTGTTTTTAATCTTCCTTTTTGTGATTGAATTAATGCTCTGTTTTTGCAGGTAAGATGCAAGAATGAGAAAATTTGCAGTGAAGAAGGGACGAAAATTATTGTTACAGATTAAAATGACAATACTTATACAGGATTGGTTCTTAGCCAGAAAGCTTTTGGTGAATGGTTGTGAGTAGAAAAGATAGATTGCTATTGAGTTATGGAGTTGTGGATATATTCTCTAATTATTTCTGTGTTTGAAGACTTCAATTTAAGTCTTCTAAGCACTCTAATTTTAACAAAACAACTCCTAATTTGAAGGCCCATATATTTTCTACCAAACTATCACAAGGTACAACTTTCTTTCACCTGCTCTCAACAAATACCTGATATTTGAGTTCTTTTCTTTATCCATGTTTCCTTGTATGTCAAAGATTTTGGTTAGAGGTTAGAAAAAGAATGGTAGAAAAAGGTGAGGATGTGTAAAGAAAATGGAGGAATGAATGAGTTTAGAGGTCCACCATTAAACTTGAAACTTATGGTCAATGATTTGAACCAAAGCCAATGATTGAAATAATAATAAATACTAATTTCCATAGCTGCTTTGTGCTTTTATTTTGTAGAGTGTTGGACACCTTTTCAGTCAAATTGCTCTTGCAGGTGACTTCTTCAACAAATATATTATCATTCCAGTCTTCCAATAATGTAAGTATTTTGGTCACTAAATAAATAAGATATGTGTTTTATAAGGAAACTAATAAATCAATTAATATGTGTGCCACGAGTTAATTAACTTTCGCGAGAACATATAGTTCGACCACTAAATCTTTGTATGTTATTTCTTTACTGACAACAATACATTTTAACGCCTCCTTGCTACTTTCTTCGTTTCTGATCCCATACTCCACTATAACAAACTAAAATCCGAACATGAGTCATCTTTAAATTATGAAGAAGTTTTAATTTCCTGCAAATATTAGAAAGAAAAAAAATTAAAACAAAAACTTCAACAATTTGTAGGAAACAAGAACTAACTAAAACATGTGCATAACCACCCTAAGTCACCTAAAACACCTATAAAAGTGAGTTCCAATTGAGTGTTTTGAGTTCGAAAAAGTTGTTGTGAGATAAAAAATAATAGCTAAAAACTACCTAAAACATGTGCATACCTACCTTACATCACCTAAAACACCTATAGAAATGAATTCCAATTGAGTGTTTCAAGTTTGAAAGTTGTTGCAATATGTTGCGAGATGTTATGAGATAAAAAAATCACTTATCTTGTAAGCACCACAAAAAAATTTCATGTTTTGTAGATCCCACTAGAATTGAAAAGCTTTCTACAAGGTAAAACTACATTGCAGAAGGAGGGGGAAAAAACTTAATCCAACTCAACTCAACCATAAATAAGAGAAGACAAAAAATTCTATAACAATAAAAAGAAATCATAAAAAATTGCCACAAAAAAATGAGACTTAGAGAATGTTGAAGTTGCTATGGAGCATGGCAAAGAGAGTTTGATAGAAGAGAGACAAGAGAGCATGAGAGATAAGAAGTGAGAAAGAAGTTAGAGGAAAGACAGAGAGCATGAGAAAACTTACAAAATGTGTGTTATTAGGAACAAAAAGTTGGTTTTTCTCACTTAAGGATATAATGGACATTTCACATGTCTATTTGTCTCAAAAGTATTCTTTTTAAAAAGTGATCCCAAAACTCTTTAGGGTCCATCTAGTGTCTTATCTTTGGCAATTTTCCAAAAGGAATATATATATATATAGAGTCAAACTTAGGGTTTTGAGTTGAAAGTTTGTATATTTATATAGGGTTTAAAAAAAAGGAAAAATGGGATGGATGACCCAAAATAAAATGCTGAAATGAAATTTGGCCTAAGTTTTGAAAACAAATGAAAAATGACTTTTTGCTTACATCATCCACTTGTGAAATTACCACTTTAACCCCTAATAAACTCTTCATCCTTACTTCTTCATTTTCCAGCTTTTTTTCACGTTTTCTTCCACTTGCTCCTCCTCCTCCTCTCGACTCAAAGATTGAAGGGAGATCAAATACTTCTTCTTCTTCTCCTCCTCTCAAATAAAAAATTGGAGGGAGATCAAAGAGCGAAAAAAAGAAGCGAGATCGATACCAAAGAGCGAGAGGAAGAAGCGAGAGCAAGACAGAGAAGCAAGAGGAAGAAGTGAGAGAGAGAATCTAAATAAAGAGAAAAATTGATGAAAAAAGTGTTTGGTGCTATGTTGGTGATGAACGAGAGGGAGAAGGAAAAGGGAAGAAATGAGGAGCGAGAGGAATGAATGAGAATTTGTGGTAGGGTGTGTTCTGGGACAAATCGGGGGACAAATGGTACTTTCACACTTGGCTGACATCACTATAAGGCTATTTTTCGAGTGTTTTGAAACCTTGGGCCACTTTTCATTTGTGCCTTTGAGAGAAAAAGGTCATCCATACAAAGAACAAAGAAAAAAAAAGGAAAGGAAATCAATTTTGTTTTTTAGCCACATGCAGCCCAAGAAGGAGTCATCATCTTCCTTAGTCCCTCTCTCTCACGCAAGTTTCCTCTCTCGCCGACACCCTCCCTACCGTTTCAGATAGTTGGGCGCATGCCCGACCATCATCACTGCCGGTGTGCTGTTGATAAGAACTTCGTTCGAACTATTCCTGCAAGTAAGCTCCGTCTTGATCCATCGAGCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTAAACATTATCTCTGTGTGTTTAGATCCAGTGGCGCCACTGTTCCAATTCACGTTCACTACCACCGTCTGTCGTCGACTCTACCATCCGCTGCCATAAGTTGCCATGTCTCGCCAGATTTTGATTGGATCTTGTCGAAATCTTTATTTTGATTAAGCTCATGTTATTTGGAAAGGATTGTTGGGTATCTTGAATACACAATAACTTTTGGCTTAATTGGTTGATACCCATTATGTTTTTGAATTTAGGTCGAAGTTTCAGGGTGTTAAGAACCGTGTCCCATTAGTTTGGCATGAATACTTGTGTTAATTGGATTTTAGACTTGGATCTAAAACCCCCATGGTTTATGTCTAGATTGGATTTTGTATTTGAAGCTCGAGTGTAGTTCCAGTTAAGTCGACACTTTGGGTAAGTGGTTTGTTGCATTGGAGGTGAATTTGTTATTTGGGATATGTCTCTAAGATTGGAATTTAACCAGGCTTTTGTTATAGGGCTTGATTCAAGATTTCATTAGGCAAGGAAGAGGACAAATTTGCTTGATTGGGCTTAAACTTGAAGTAAGTGGCACTACTACTGGAATGCCTTGGAGCCAGGCGCCCTAGATAAGATAATATTATTATGTTGGATAAGTTCCAACTGCTTGTTATGGGATGTTTGAGATAATTTGCTATGTTTTTGTGTTGTGATGATATGTTTGTGGTATGAAATCATATTGGTTAGGTACGATTTATGAAGGGAATGAAAAATATGGTCATGTTTGGACTTTGATTCGTGATATAGGACCCATTGAATATATGTTGCTTGTTAGTTAAGTAGGTGATGATCTACTCTCTTATCAGTATTATGTATAACCATGAAGCGAAGGGTTCTCTACAATGATATGACCATCAACCTACTACGTATTTTATATACTCACCCTTTATTACATTATGTTTTTCAAGTAAAGGAAAGGACATAGCGACACATGATAAAAAGAATTT

mRNA sequence

ATGTTCTCCCTTCACTGCCCTACTGCCGAAGCGTTCTCGTTTCGTGCAAAGCTTTGTTTCATTTCGTCTTCGGTTCAGAGGTTTGTTAGTTTGCGTTCGTCTGTTGTTGGCTTAAGTCTGCCACAAAGTGCTCTTGCACCACTTCTTGTTCGACCAGCAGCGATATTGTCTTCTTCTCTGTCTTTGACCAATAAGAAGTTGTCATATCTGGAGGATGAAAGGGTGATTGCCCACCGTGAGAATGGAGCTTTAGATTACGATCGGTTCGATGGTACAAAGATGATTATTCTAGGTATTCATGGTTGTAAGTTGGGTAGTACTAAAACTAAGAAATGGAGGCTATGGAGAAGCCCATCAGGGGATTTGACCCCTGCTTGGAAGGGTTATAAAGTGGGATACAAAGCAGCTTCTGAAGGATCTGATTCTCCTAGAGTGGCTGATTCTTTTACCGCTGTCGTCGCCACCATCCTCCGTGCTGCACCAAGGAATTTCAGGGTTGTCCACCAAGAATGGGCTGCAATTAGGATCCAAATTGCATTTCGTGGTTTCTTGGTACACCTCTTTGTTCTAGGATCCAAATTGCATTTCGTGGTTTCTTGATCCAGTGGCGCCACTGTTCCAATTCACGTTCACTACCACCGTCTGTCGTCGACTCTACCATCCGCTGCCATAAGTTGCCATGTCTCGCCAGATTTTGATTGGATCTTGTCGAAATCTTTATTTTGATTAAGCTCATGTTATTTGGAAAGGATTGTTGGGTATCTTGAATACACAATAACTTTTGGCTTAATTGGTTGATACCCATTATGTTTTTGAATTTAGGTCGAAGTTTCAGGGTGTTAAGAACCGTGTCCCATTAGTTTGGCATGAATACTTGTGTTAATTGGATTTTAGACTTGGATCTAAAACCCCCATGGTTTATGTCTAGATTGGATTTTGTATTTGAAGCTCGAGTGTAGTTCCAGTTAAGTCGACACTTTGGGGCTTGATTCAAGATTTCATTAGGCAAGGAAGAGGACAAATTTGCTTGATTGGGCTTAAACTTGAAGTAAGTGGCACTACTACTGGAATGCCTTGGAGCCAGGCGCCCTAGATAAGATAATATTATTATGTTGGATAAGTTCCAACTGCTTGTTATGGGATGTTTGAGATAATTTGCTATGTTTTTGTGTTGTGATGATATGTTTGTGGTATGAAATCATATTGGTTAGGTACGATTTATGAAGGGAATGAAAAATATGGTCATGTTTGGACTTTGATTCGTGATATAGGACCCATTGAATATATGTTGCTTGTTAGTTAAGTAGGTGATGATCTACTCTCTTATCAGTATTATGTATAACCATGAAGCGAAGGGTTCTCTACAATGATATGACCATCAACCTACTACGTATTTTATATACTCACCCTTTATTACATTATGTTTTTCAAGTAAAGGAAAGGACATAGCGACACATGATAAAAAGAATTT

Coding sequence (CDS)

ATGTTCTCCCTTCACTGCCCTACTGCCGAAGCGTTCTCGTTTCGTGCAAAGCTTTGTTTCATTTCGTCTTCGGTTCAGAGGTTTGTTAGTTTGCGTTCGTCTGTTGTTGGCTTAAGTCTGCCACAAAGTGCTCTTGCACCACTTCTTGTTCGACCAGCAGCGATATTGTCTTCTTCTCTGTCTTTGACCAATAAGAAGTTGTCATATCTGGAGGATGAAAGGGTGATTGCCCACCGTGAGAATGGAGCTTTAGATTACGATCGGTTCGATGGTACAAAGATGATTATTCTAGGTATTCATGGTTGTAAGTTGGGTAGTACTAAAACTAAGAAATGGAGGCTATGGAGAAGCCCATCAGGGGATTTGACCCCTGCTTGGAAGGGTTATAAAGTGGGATACAAAGCAGCTTCTGAAGGATCTGATTCTCCTAGAGTGGCTGATTCTTTTACCGCTGTCGTCGCCACCATCCTCCGTGCTGCACCAAGGAATTTCAGGGTTGTCCACCAAGAATGGGCTGCAATTAGGATCCAAATTGCATTTCGTGGTTTCTTGGTACACCTCTTTGTTCTAGGATCCAAATTGCATTTCGTGGTTTCTTGA

Protein sequence

MFSLHCPTAEAFSFRAKLCFISSSVQRFVSLRSSVVGLSLPQSALAPLLVRPAAILSSSLSLTNKKLSYLEDERVIAHRENGALDYDRFDGTKMIILGIHGCKLGSTKTKKWRLWRSPSGDLTPAWKGYKVGYKAASEGSDSPRVADSFTAVVATILRAAPRNFRVVHQEWAAIRIQIAFRGFLVHLFVLGSKLHFVVS
Homology
[Close]
BLAST of Lsi03G008600 vs. TrEMBL
Match: A0A0A0L2S3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646180 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-32
Identity = 71/82 (86.59%), Postives = 75/82 (91.46%), Query Frame = 1 

Query: 103 KLGSTKTKKWRLWRSPSGDLTPAWKGYKVGYKAASEGSDSPRVADSFTAVVATILRAAPR 162
           KLGSTKTKKW+LWRSPSGDL+ AWKGYK G+KAASEGSDSPR ADSFTA VAT+LRA PR
Sbjct: 24  KLGSTKTKKWKLWRSPSGDLSTAWKGYKGGHKAASEGSDSPRAADSFTAAVATVLRAPPR 83

Query: 163 NFRVVHQEWAAIRIQIAFRGFL 185
           NFRVV QEWAAIRIQ AFRGFL
Sbjct: 84  NFRVVRQEWAAIRIQTAFRGFL 105

[Close]
BLAST of Lsi03G008600 vs. TrEMBL
Match: W9RRW9_9ROSA (Protein IQ-DOMAIN 1 OS=Morus notabilis GN=L484_019484 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.5e-23
Identity = 59/110 (53.64%), Postives = 77/110 (70.00%), Query Frame = 1 

Query: 75  VIAHRENGALDYDRFDGTKMIILGIHGCKLGSTKTKKWRLWRSPSGDLTPAWKGYKVGYK 134
           +I H++    D+D+  G                K+KKWRLWRS S D+  AWKG+K  ++
Sbjct: 11  LIGHKKTEKEDHDKSAG----------------KSKKWRLWRSSSVDMGSAWKGFKGSHR 70

Query: 135 AASEGSDSPRVADSFTAVVATILRAAPRNFRVVHQEWAAIRIQIAFRGFL 185
           AASEGSDSPR+AD+F+A +AT++RA PR+F+VV QEWAAIRIQ AFRGFL
Sbjct: 71  AASEGSDSPRMADAFSAAMATVVRAPPRDFKVVRQEWAAIRIQTAFRGFL 104

[Close]
BLAST of Lsi03G008600 vs. TrEMBL
Match: M5XCE5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006066mg PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.7e-22
Identity = 52/79 (65.82%), Postives = 65/79 (82.28%), Query Frame = 1 

Query: 106 STKTKKWRLWRSPSGDLTPAWKGYKVGYKAASEGSDSPRVADSFTAVVATILRAAPRNFR 165
           S K+KKW+LWR+ SGD   +WKG+K  ++AASEGSDSPR  D++ A VAT++RA P++FR
Sbjct: 26  SGKSKKWKLWRNSSGDFGSSWKGFKGNHRAASEGSDSPRGTDAYNAAVATVVRAPPKDFR 85

Query: 166 VVHQEWAAIRIQIAFRGFL 185
           VV QEWAAIRIQ AFRGFL
Sbjct: 86  VVRQEWAAIRIQTAFRGFL 104

[Close]
BLAST of Lsi03G008600 vs. TrEMBL
Match: U5GEE9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s24310g PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.0e-21
Identity = 52/79 (65.82%), Postives = 64/79 (81.01%), Query Frame = 1 

Query: 106 STKTKKWRLWRSPSGDLTPAWKGYKVGYKAASEGSDSPRVADSFTAVVATILRAAPRNFR 165
           S K+KKW+LWRS SGDL  +WKG+K  ++AASE S S  +AD FTA +AT++RA P++FR
Sbjct: 28  SGKSKKWKLWRSSSGDLGSSWKGFKGNHRAASEASGSSPLADPFTAAMATVVRAPPKDFR 87

Query: 166 VVHQEWAAIRIQIAFRGFL 185
           VV QEWAAIRIQ AFRGFL
Sbjct: 88  VVRQEWAAIRIQTAFRGFL 106

[Close]
BLAST of Lsi03G008600 vs. TrEMBL
Match: B9HDD2_POPTR (Calmodulin-binding family protein OS=Populus trichocarpa GN=POPTR_0006s24310g PE=4 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 4.0e-21
Identity = 52/79 (65.82%), Postives = 64/79 (81.01%), Query Frame = 1 

Query: 106 STKTKKWRLWRSPSGDLTPAWKGYKVGYKAASEGSDSPRVADSFTAVVATILRAAPRNFR 165
           S K+KKW+LWRS SGDL  +WKG+K  ++AASE S S  +AD FTA +AT++RA P++FR
Sbjct: 28  SGKSKKWKLWRSSSGDLGSSWKGFKGNHRAASEASGSSPLADPFTAAMATVVRAPPKDFR 87

Query: 166 VVHQEWAAIRIQIAFRGFL 185
           VV QEWAAIRIQ AFRGFL
Sbjct: 88  VVRQEWAAIRIQTAFRGFL 106

[Close]
BLAST of Lsi03G008600 vs. TAIR10
Match: AT2G26180.1 (AT2G26180.1 IQ-domain 6)

HSP 1 Score: 84.3 bits (207), Expect = 9.0e-17
Identity = 42/80 (52.50%), Postives = 59/80 (73.75%), Query Frame = 1 

Query: 105 GSTKTKKWRLWRSPSGDLTPAWKGYKVGYKAASEGSDSPRVADSFTAVVATILRAAPRNF 164
           G+ K KKW+LWR+ S D   +WKG++  +++ S+G DS  V   ++A VAT+LRA P++F
Sbjct: 25  GNGKNKKWKLWRTTSVD---SWKGFRGKHRSDSDGVDSSTV---YSAAVATVLRAPPKDF 84

Query: 165 RVVHQEWAAIRIQIAFRGFL 185
           + V +EWAAIRIQ AFRGFL
Sbjct: 85  KAVREEWAAIRIQTAFRGFL 98

[Close]
BLAST of Lsi03G008600 vs. TAIR10
Match: AT1G72670.1 (AT1G72670.1 IQ-domain 8)

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13
Identity = 41/80 (51.25%), Postives = 52/80 (65.00%), Query Frame = 1 

Query: 110 KKWRLWRSPSGDLTPAWKGYKV---GYKAASEGSDSPRVA--DSFTAVVATILRAAPRNF 169
           KKW+LWR+ S  L  + KG+K     Y   S GSD P  +  DSFTA VA ++RA P++F
Sbjct: 28  KKWKLWRTSSEGLISSSKGFKSRGGSYGTPSLGSDPPSFSADDSFTAAVAAVIRAPPKDF 87

Query: 170 RVVHQEWAAIRIQIAFRGFL 185
            +V +EWAA RIQ AFR FL
Sbjct: 88  FLVKREWAATRIQAAFRAFL 107

[Close]
BLAST of Lsi03G008600 vs. TAIR10
Match: AT1G17480.1 (AT1G17480.1 IQ-domain 7)

HSP 1 Score: 64.7 bits (156), Expect = 7.4e-11
Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 1 

Query: 110 KKWRLWRSPSGDLTPAWKGYKVGYKAASEGSDSPRVA--DSFTAVVATILRAAPRNFRVV 169
           KKW+LWR  S  L  +    +  Y A+S GS+ P  +  ++FT  +A ++RA PR+F +V
Sbjct: 32  KKWKLWRISSESLASSSFKSRGSYAASSLGSELPSFSADEAFTTAMAALIRAPPRDFLMV 91

Query: 170 HQEWAAIRIQIAFRGFL 185
            +EWA+ RIQ AFR FL
Sbjct: 92  KREWASTRIQAAFRAFL 108

[Close]
BLAST of Lsi03G008600 vs. NCBI nr
Match: gi|449447132|ref|XP_004141323.1| (PREDICTED: protein IQ-DOMAIN 1 [Cucumis sativus])

HSP 1 Score: 147.9 bits (372), Expect = 1.9e-32
Identity = 71/82 (86.59%), Postives = 75/82 (91.46%), Query Frame = 1 

Query: 103 KLGSTKTKKWRLWRSPSGDLTPAWKGYKVGYKAASEGSDSPRVADSFTAVVATILRAAPR 162
           KLGSTKTKKW+LWRSPSGDL+ AWKGYK G+KAASEGSDSPR ADSFTA VAT+LRA PR
Sbjct: 24  KLGSTKTKKWKLWRSPSGDLSTAWKGYKGGHKAASEGSDSPRAADSFTAAVATVLRAPPR 83

Query: 163 NFRVVHQEWAAIRIQIAFRGFL 185
           NFRVV QEWAAIRIQ AFRGFL
Sbjct: 84  NFRVVRQEWAAIRIQTAFRGFL 105

[Close]
BLAST of Lsi03G008600 vs. NCBI nr
Match: gi|659103880|ref|XP_008452736.1| (PREDICTED: protein IQ-DOMAIN 1 [Cucumis melo])

HSP 1 Score: 146.4 bits (368), Expect = 5.5e-32
Identity = 70/82 (85.37%), Postives = 74/82 (90.24%), Query Frame = 1 

Query: 103 KLGSTKTKKWRLWRSPSGDLTPAWKGYKVGYKAASEGSDSPRVADSFTAVVATILRAAPR 162
           KLG TKTKKW+LWRSPSGDL+ AWKGYK G+KAASEGSDSPR ADSFTA VAT+LRA PR
Sbjct: 24  KLGGTKTKKWKLWRSPSGDLSSAWKGYKGGHKAASEGSDSPRAADSFTAAVATVLRAPPR 83

Query: 163 NFRVVHQEWAAIRIQIAFRGFL 185
           NFRVV QEWAAIRIQ AFRGFL
Sbjct: 84  NFRVVRQEWAAIRIQTAFRGFL 105

[Close]
BLAST of Lsi03G008600 vs. NCBI nr
Match: gi|1009134571|ref|XP_015884520.1| (PREDICTED: protein IQ-DOMAIN 1 [Ziziphus jujuba])

HSP 1 Score: 123.2 bits (308), Expect = 5.0e-25
Identity = 58/79 (73.42%), Postives = 68/79 (86.08%), Query Frame = 1 

Query: 106 STKTKKWRLWRSPSGDLTPAWKGYKVGYKAASEGSDSPRVADSFTAVVATILRAAPRNFR 165
           S K+KKWRLWR  SGDL  AWKG+K  +KAASEGSDSPR+AD+FTA +AT++RA P++FR
Sbjct: 26  SGKSKKWRLWRGSSGDLGSAWKGFKGSHKAASEGSDSPRLADAFTAAMATVVRAPPKDFR 85

Query: 166 VVHQEWAAIRIQIAFRGFL 185
           VV QEWAAIRIQ AFRGFL
Sbjct: 86  VVRQEWAAIRIQTAFRGFL 104

[Close]
BLAST of Lsi03G008600 vs. NCBI nr
Match: gi|703100911|ref|XP_010097046.1| (Protein IQ-DOMAIN 1 [Morus notabilis])

HSP 1 Score: 117.9 bits (294), Expect = 2.1e-23
Identity = 59/110 (53.64%), Postives = 77/110 (70.00%), Query Frame = 1 

Query: 75  VIAHRENGALDYDRFDGTKMIILGIHGCKLGSTKTKKWRLWRSPSGDLTPAWKGYKVGYK 134
           +I H++    D+D+  G                K+KKWRLWRS S D+  AWKG+K  ++
Sbjct: 11  LIGHKKTEKEDHDKSAG----------------KSKKWRLWRSSSVDMGSAWKGFKGSHR 70

Query: 135 AASEGSDSPRVADSFTAVVATILRAAPRNFRVVHQEWAAIRIQIAFRGFL 185
           AASEGSDSPR+AD+F+A +AT++RA PR+F+VV QEWAAIRIQ AFRGFL
Sbjct: 71  AASEGSDSPRMADAFSAAMATVVRAPPRDFKVVRQEWAAIRIQTAFRGFL 104

[Close]
BLAST of Lsi03G008600 vs. NCBI nr
Match: gi|470113167|ref|XP_004292798.1| (PREDICTED: protein IQ-DOMAIN 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 114.8 bits (286), Expect = 1.8e-22
Identity = 53/77 (68.83%), Postives = 65/77 (84.42%), Query Frame = 1 

Query: 108 KTKKWRLWRSPSGDLTPAWKGYKVGYKAASEGSDSPRVADSFTAVVATILRAAPRNFRVV 167
           K KKW+LWR+ SGD   +WKG+K  ++AASEGSDSPR A+++TA VAT++RA PR+FRVV
Sbjct: 28  KNKKWKLWRNSSGDFGSSWKGFKGSHRAASEGSDSPRRAEAYTAAVATVVRAHPRDFRVV 87

Query: 168 HQEWAAIRIQIAFRGFL 185
            QEWAAIRIQ AFRGFL
Sbjct: 88  RQEWAAIRIQTAFRGFL 104

The following BLAST results are available for this feature:
BLAST of Lsi03G008600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi03G008600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2S3_CUCSA1.3e-3286.59Uncharacterized protein OS=Cucumis sativus GN=Csa_4G646180 PE=4 SV=1[more]
W9RRW9_9ROSA1.5e-2353.64Protein IQ-DOMAIN 1 OS=Morus notabilis GN=L484_019484 PE=4 SV=1[more]
M5XCE5_PRUPE2.7e-2265.82Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006066mg PE=4 SV=1[more]
U5GEE9_POPTR4.0e-2165.82Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s24310g PE=4 SV=1[more]
B9HDD2_POPTR4.0e-2165.82Calmodulin-binding family protein OS=Populus trichocarpa GN=POPTR_0006s24310g PE... [more]
BLAST of Lsi03G008600 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G26180.19.0e-1752.50 IQ-domain 6[more]
AT1G72670.11.2e-1351.25 IQ-domain 8[more]
AT1G17480.17.4e-1144.16 IQ-domain 7[more]
BLAST of Lsi03G008600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449447132|ref|XP_004141323.1|1.9e-3286.59PREDICTED: protein IQ-DOMAIN 1 [Cucumis sativus][more]
gi|659103880|ref|XP_008452736.1|5.5e-3285.37PREDICTED: protein IQ-DOMAIN 1 [Cucumis melo][more]
gi|1009134571|ref|XP_015884520.1|5.0e-2573.42PREDICTED: protein IQ-DOMAIN 1 [Ziziphus jujuba][more]
gi|703100911|ref|XP_010097046.1|2.1e-2353.64Protein IQ-DOMAIN 1 [Morus notabilis][more]
gi|470113167|ref|XP_004292798.1|1.8e-2268.83PREDICTED: protein IQ-DOMAIN 1 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G008600.1Lsi03G008600.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32295FAMILY NOT NAMEDcoord: 105..184
score: 4.0
NoneNo IPR availablePANTHERPTHR32295:SF6SUBFAMILY NOT NAMEDcoord: 105..184
score: 4.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi03G008600Watermelon (97103) v2lsiwmbB250
Lsi03G008600Watermelon (97103) v2lsiwmbB246
Lsi03G008600Wax gourdlsiwgoB320
Lsi03G008600Cucumber (Gy14) v1cgylsiB310
Lsi03G008600Cucurbita maxima (Rimu)cmalsiB117
Lsi03G008600Cucurbita maxima (Rimu)cmalsiB482
Lsi03G008600Cucurbita moschata (Rifu)cmolsiB104
Lsi03G008600Cucurbita moschata (Rifu)cmolsiB466
Lsi03G008600Cucurbita pepo (Zucchini)cpelsiB206
Lsi03G008600Cucurbita pepo (Zucchini)cpelsiB544
Lsi03G008600Wild cucumber (PI 183967)cpilsiB454
Lsi03G008600Cucumber (Chinese Long) v2culsiB446
Lsi03G008600Melon (DHL92) v3.5.1lsimeB265
Lsi03G008600Watermelon (Charleston Gray)lsiwcgB211
Lsi03G008600Cucumber (Gy14) v2cgyblsiB411
Lsi03G008600Melon (DHL92) v3.6.1lsimedB278
Lsi03G008600Silver-seed gourdcarlsiB590
Lsi03G008600Silver-seed gourdcarlsiB674
Lsi03G008600Cucumber (Chinese Long) v3cuclsiB475