Lsi03G007340 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCACTCTGCCCTTCTCAACGCCCTCTTGGCGGCGGCGCTGCTCTTCTCCGCCGCCGCCCCCTCTCCATCTCCGTCACCAGCCCTGTCCCCCACTCCCCCGGCCTCCCCTTCCCCTCCCTGGAGATGGACCCCCATCACCAAGCCTCCTCCACCACCAACGCCGTCGCATGAAACCAAGCCCACTCCACCGCCGTCGTCTCCGGCACCAGCACCGTCGCCTACTCCAGTTCCGCCGCTGGCTCATCACCATGCACCAACTCCGGGTCCAGTTTCCCCGCCGCCGCCGCAGAGCCCTTCTCCGTCCCCTCTGTCAGTACCATCTCCGTCTCCGTCTCCGTCCTGGATCGACGGACCGCCGTCGGAAGCACCGGCGCCGTCAAAACCGAAGAGCGATGCCTTTCATAATAGATTCTCGGTGGTGGGATCGGTGGCTATTGGAGCCATGGCTGCTGCTCTGCTTTAA ATGCCTCACTCTGCCCTTCTCAACGCCCTCTTGGCGGCGGCGCTGCTCTTCTCCGCCGCCGCCCCCTCTCCATCTCCGTCACCAGCCCTGTCCCCCACTCCCCCGGCCTCCCCTTCCCCTCCCTGGAGATGGACCCCCATCACCAAGCCTCCTCCACCACCAACGCCGTCGCATGAAACCAAGCCCACTCCACCGCCGTCGTCTCCGGCACCAGCACCGTCGCCTACTCCAGTTCCGCCGCTGGCTCATCACCATGCACCAACTCCGGGTCCAGTTTCCCCGCCGCCGCCGCAGAGCCCTTCTCCGTCCCCTCTGTCAGTACCATCTCCGTCTCCGTCTCCGTCCTGGATCGACGGACCGCCGTCGGAAGCACCGGCGCCGTCAAAACCGAAGAGCGATGCCTTTCATAATAGATTCTCGGTGGTGGGATCGGTGGCTATTGGAGCCATGGCTGCTGCTCTGCTTTAA ATGCCTCACTCTGCCCTTCTCAACGCCCTCTTGGCGGCGGCGCTGCTCTTCTCCGCCGCCGCCCCCTCTCCATCTCCGTCACCAGCCCTGTCCCCCACTCCCCCGGCCTCCCCTTCCCCTCCCTGGAGATGGACCCCCATCACCAAGCCTCCTCCACCACCAACGCCGTCGCATGAAACCAAGCCCACTCCACCGCCGTCGTCTCCGGCACCAGCACCGTCGCCTACTCCAGTTCCGCCGCTGGCTCATCACCATGCACCAACTCCGGGTCCAGTTTCCCCGCCGCCGCCGCAGAGCCCTTCTCCGTCCCCTCTGTCAGTACCATCTCCGTCTCCGTCTCCGTCCTGGATCGACGGACCGCCGTCGGAAGCACCGGCGCCGTCAAAACCGAAGAGCGATGCCTTTCATAATAGATTCTCGGTGGTGGGATCGGTGGCTATTGGAGCCATGGCTGCTGCTCTGCTTTAA MPHSALLNALLAAALLFSAAAPSPSPSPALSPTPPASPSPPWRWTPITKPPPPPTPSHETKPTPPPSSPAPAPSPTPVPPLAHHHAPTPGPVSPPPPQSPSPSPLSVPSPSPSPSWIDGPPSEAPAPSKPKSDAFHNRFSVVGSVAIGAMAAALL
BLAST of Lsi03G007340 vs. Swiss-Prot
Match: Y091_NPVOP (Uncharacterized 29.3 kDa protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=ORF92 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 4.0e-06 Identity = 59/117 (50.43%), Postives = 69/117 (58.97%), Query Frame = 1
BLAST of Lsi03G007340 vs. TrEMBL
Match: A0A0A0K238_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G064060 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.8e-29 Identity = 105/156 (67.31%), Postives = 111/156 (71.15%), Query Frame = 1
BLAST of Lsi03G007340 vs. TrEMBL
Match: A0A093H3P1_PICPB (Neurofilament heavy polypeptide (Fragment) OS=Picoides pubescens GN=N307_08864 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 8.1e-06 Identity = 61/114 (53.51%), Postives = 73/114 (64.04%), Query Frame = 1
BLAST of Lsi03G007340 vs. NCBI nr
Match: gi|778730170|ref|XP_011659717.1| (PREDICTED: vegetative cell wall protein gp1-like [Cucumis sativus]) HSP 1 Score: 137.1 bits (344), Expect = 2.6e-29 Identity = 105/156 (67.31%), Postives = 111/156 (71.15%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |