Lsi03G007090 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi03G007090
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description11S seed storage protein
Locationchr03 : 9346399 .. 9357094 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTAGGTTTCACTACCCCAATTTAGATTTTCTATATACAAAGAAAAGGACATCAAATTAATTAATATACTGACACCCATATCATAACGGCCTTATAAAAATAACTATAATATAGAGAATAGTAAAACTCTCTGGATCTTTTAAATTTTGAGGCAATTTCGACATTGCATTCTTCAACGTGGTTGACAATCTCATAGGCCTCCAATGTCTTCTTGTTTAACATCACATCCTTCACAGACTTCACATATTTTGACATTTGTTCAAGTACATTTCCAAAAGAAATATGTGAAGCTAAATTTTTTTACAATTTTGTGAATTGTGAGTCAAGTCTTTTCTTTTGAAGGGCTATGGGTGAGGAACAAAATTAAGGATTGTAGAAGAAGAAGACTGAGTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAATTCTAGGCAATGTTATTGCCTCTTTTTGTATTTTCGTAGCAATGTTTAATGTGTCAATTTTGATTGACTCTTTAGTTGGTCTCTTTTCTCAATCATTTAGTGTTTTTCTAATTCTCAGTGTGGATAGCTTTGTAGTGTTCCCTTGAGTTCATCTCAATATCATTGGAAGACATACTTTTTGGGAGAATATTGAAAGTAGTTTCCATCGGACTAATTTGGAGTATACTAGGTGACAACAGTTAGAAGAAAAGATCTTTAGGAACAATTCAGAAGAAACATCTTGGAGAATTAACTTCATCATTTAGATTTGTGAAAGATTGTATTTTATTGAATATGATCCGATGCCTTTACAAGAATTATTCAAGGATTACATATACACAAACATAATTACAAAGAAGGAAAGAATAAATTAGCCTAAGAATGGGGATTCTTAATTTCCTAATTTTGAGCATAATCATATATGGTAACACCCTCCCTCAAACTCAAGGTGGTAGAGTATCAACCAACTTGAGTTTGTGAAGCAACTGAAGAAAGCGATTGGGTGACAAAGCTTTTGTGAAGATATCTGCTGGTTGCTTTATAGTAGAAATGGAGCGCAAGAGGAGTGTGTTGTCCAAGAGATGATGACGAACGAAGTGACAATCATTTTCAATGTATTTGGTACGTTCATGAAATACATCATTGTGCTCTATCTGGATGGCACTATGATTGTCACAATGAAATATAGTAGCGGACTGTTGAGGAACACCCATATCAGCAAGAAGCCACCGAAGCCATAGTAACTCAGAGGTAGCATCTACAAGAGCACGATATTCAGATTCTGTGCTGGAACGTGAAACAACAGTTTGTTTCTTACTTCGCCAAGAGATGAGAGAATCACCTAAGTAAAAACAATAACCTGTAGTGGAACGTCGATCAGTGGGATCACCAGCCCAATCAGCATCAGAGTAGCCAGATAATACCAAGGATGACTGGGAAGGAAACTTTAGGCCATGGCCAATAGTGCCCTTGACATAGCTTAGAATGCGAAGAACAGCAGTAAAATGTATCGACCTGGGAGCCGCCATAAACTGACTAACAATATGAACAACATCTGCAATATCTGGACGGGTCACAGTAAGGTAAATGAGACTGTCAACCAATTGTCGATAAAGAGTGGCATCTTCGAGAGGAACACCATCAAATGGAGTCAAACAAACATTTGGGCCCAATGGTGATGACGATGTAGTAGAGTCAGTAATGCCAGATCGAGCCAAAAGATCAAAAACATATTTAGCTTGAGATAAGTAATAACCATCAGAGTGAGATGAGACCTCAAGACCAAAGAAGTAGTTGAGTGGTCCCAAATCTTTCATCTCAAAGCGTTGTCCCAGATAGCTTTGTAAGTCAGAAATAGCTTGAGGATCATCACCTGTAATTATCATATCATCAACATAAAGGAGAAGAAGAACAATACCCTTAGGAGTTTGTCGTATAAAAAGAGTTGTATCGTGAGGACTGGAAGTAAAACCAAGTTGAGTGATAGTCGAACTGAATGTAGCAAACCATGCTCGTGGGGTTTGTTTCAGACCATATAAGGCTCGTCGGAGAAGACACACTTTTTGAGGTGGGGGAGTCGTGCCAGGTAGAGGTTTCATATACACTTCTTCAGATAGGGTGCCATTGAGAAATGCATTTTTAATATCCATCTGCAGAAGAGACCACTATTTGGCAGCGGCAACAGCTAAAAGGCTGCGAACAGAGGTCATTCGAGCTACTGGAGCAAATGTCTCTTCATAGTCAATGTCGTATTCCTGAGAATAGCCTTTTGAAACAAGCCGAGCTTTATAACGTTCAATAGAACCATCAGAATGTGTTTTGATTTTATAAATCCACTTACAGCCAATAGGTCTTTTTCTTGGGGGAAGATCAACGTAATCCCAAGTATGAGTCTTTTCTAATGCCTGGAGTTCCTCATCCATTGCTTGCTGCCAAAGAGGGTTAGTGTTGCCCTCATGATAAGAAGATGGTTCGACTAGAGACTGAATAGTATAAAAACAATGAAAGTCTTGAAGATGATGGGGAGGTTGACTTACCCGAGTGGAGCGAAAAACTGGAATGATTGGTGCAGGTTCAGATTCAGCAGCGGAGACAGATGTTGATGTCGGGTGAGCAGGGATAGGATCAGTTGAGCAGATTGTGAAATGGCTGGATTAGATGCAGAAGTAGTATTGAAATTCAATGTTTGGTTTAGAAGAGGAGACATAGGAGTGGGTGGGTCAAGTTCAGGAAAAAGGGGATTGGAGGGATCGGTAAAGAAAATTTGTGAACTAGACAGAGAGGTATGGAAGGAGGAGATACTAGAAAACATACGATGCTCCCAAAAAGTAATATGGCGAGAAATACGTAATCGTTTAGAGATAGGATCCCAACAATGAAAACCTTTATGTTCAGTTCCATAGCCAAGAAAACAACATAAATGTGCACGAGGTTCAAGTTTGGTATGTTCATGAGGGTGTAAAAGAACAAAGCAGGCACAACCAAAAACTTTAAGGTGGGAGTATGAAGGAGGAGTACCGTAGAGACGTTCAAAAGGAGAGATATTTTGAATGACAGAGGAAGGAAGACGATTGATGACGTAGACAGAAGTGAGAGTAGCTTCACCCCAAAACTTCTCAGGGCAAGCAGCAGAAAGAAGTTGGGCACGGACAGAATCCAAAATATGGCGATGTTTACGCTCAACCCGACCATTTTGTTGAGAGGTGTGAGGACATGAGCGTTGAACAAGAGTTCCTTGTTGGCTAAGAAAAGAGAGAAGATTTGAGTCATTGTACTCCATTGCATTATCTGTACGAAGGACCTTGATGATTCGAGAGAATTGTGTTTGAACCATATTAGAAAAATCAATATAGACTTGAGATAAAGCCGAACGATTTTTCAAAAAATATATCCAAGTAAAGCGAGAATAGTTGTCAATGAATAGGACAAAATAACGATAGCCATTGACAGTCGGGATAGGAGCAGGACCCCATATGTCAGAGTGAACTAAGCCGAAAGGTGTATCACAAGAAGATGCAGAAATAGGAAAAGACAAGGCAGGTTGTTTTGTAAGTTTACAATTTAAACAGTTAAATGAATCAAATTTTGAATATTCTGTAAATTGCTAAAAGAGACTAACTTGCAAAGTTTTTCAGAGGAAGCATGGCCAAGGCAAAGATGCCATTGATATATAGCCGAGTCAGTGACAGGCGCAGAAATAGATTGAGAAGTGGGAAGCTGAAGAGAAGTGAGCTCAAATAATCATCCTACCTTGCGCCCTGTACCAATTATTTGTCCCGTTTGCGGATCCTGAACCTGACAACCATTGGAAGAAAAACAAACAGTTAAACCAAGATCACGTAATTGGCCAACAGAGACAAGATTAAAGTTTAGATTGGGAACATGATAGGTGTTTGGAAGATTCAAGGTTGGGCTGACAAGGCTGCCGATATGGGAAATAGACATACAATTTCCATCAGCAGCATAAATGGGGGGCAGAGATGAAGCAGGAGTGGGAGAAGTCATAAGTGAAAAATCAGAGGTCATATGATTACAACAAGCAGAATCAAGAAGCCAATAATTACCTGATTTGACCGCAAGAGTAGAGGAATTTGAAAAAATTACCTTTTCCAATAAATCTAAAATGTTATTGATTGGAAACCTAAGAGGATAAGGGTCATGAGAGGATGGGGCAGCAGCAACAACAGATGATGAACTGGCGTTAGGTAAGTTCCTTGGTTTGGTGGATCTATTCAGAGGTTGAGGTGGACGGGTAGGACAATTGTCCAAAACATGGCCCTTTTTGTGACAATACCTGCACTCAGTTGTAGGACAATGAATAAATTTATGGCCATATAATGCACAATTGTTGAGAAGTGACTCATAATATTTCACCATTATGGAGAAATAGTTGAGTTAAATGAGTGGACCAAATTAAACTGAACCAGGAATCAAAATAGTGAACCAAACCCAACAGAATCGAACCAAGGTGGTCTTGATTTAAACCAAATAAAATGAACCAAACCGGATGAAACAAATATGAAACACGCTGATCGACGGCAAATGATTGGTAAGCACAGGGCTGGTCGACGTTGGCGGTAGAGCTGGTCGTCGGCAGAAGATTGCAGTGGATGGGAGATGAGCCTCGGATCTGGGCGGTGCAAACGAATCGGGGACGAATGGACTGAGGTACACGAACGGAGCGACTGGGAGATGGATCTCGGATCTGGGCGGCGCAAACAAATCTGGGACGAATAGACTGACAAGATCGGTAGATCTGGAACACAGACGTGATCGAACTTGCTGGCGGCAAATCTGGGCGAGACGAAACTCGCTGGCGGTGGATCTGGTTTGGATCGGGATTGATTTGGTTCGAAACTGATCGACAGATCTAACAGACGGCGGGACTGAACTGAAACAAACGACAGGAGGCAGATCTGGGCGAGACAAGACTGAAGGGAGCAGGACCTAAGCGATCTGGCGGCAGCGGCGGCGGCTACTAGATTAAAAACTTAAGCTCTGATACCATGTGAAAGATTGTATTTTATTGAATATGATCTGATGCATTTACAAGAATTATTCAAGGATTACATATACACAAACATAATTACAAAGAAGGAAAGAATAAATTAGCCTAAGAATGGGGATTCTTAATTTCCTAATTTTGAGCATAATCATATATGGTAACAAGATTTATGCTTAATTAATCTTCCAACCTAATTTAGTCAGACATACAATCACAACTCAAGAAGATTAATTCATTAATCGACTCTGTCAAGCTTAAAAAAATTATTTTGTTAATTGACATTATTTAAAGATATATATTTTTCTTTGGATTTAAGGTTATTTCTTGTAAAACCTGAGTATAATTTAATTAGCCGAAGGGTTATAATTAAGTAAAAGAGAGGTTATCACATGTTTGAGGGCATTTTATGGTTATATAATTATTTTAGGGGCAAAAGAATCATTTTCTAAAGAACCAATCAATTTTGAATAATAGGTAGGAAATTTGTTTCGTGTTCTGCATGCAATGTGACCACATTGTGTCCTAAACTAATTCTATAGAAATTTAATGGCTAAAACAAGTTTACTGATTTTGTGGCTCAGTTGGAAAGTCTAAATATCTTTATGGGATGTTCGTTCCCATCTTCTTCGAGAATCTAAAATCTATTTTTTATCTCTCCCGTTTTTTTTTATTCATGAATGTTCAGACTAGCTTACGTACACCTCGACTAATCTCAAAGGCAGAGATCGTATTTTCTATTTTCTCTCAAGATTATTCAGCCATCAAACGTATAAGAAGAAGGTGAATGCCATATGTAAAGTAGAAGTGGACAAATAGTTTGTGATTGGGATTTGGACCTATATATTGCTTTTCTTTCCTAATTTTCTTCTCTACGGATTAGTCATAGAAAAGGAGAAGAAAAGGCTAGAATGCATGAGCATCCTATCAATGAATTTACCTAATCTTACATTATTACTAATCGATATTTTTATATTTTCATGAGTTTGACATCAATATAAAGAGTGAATCGACATTTCAATTATATAGTAAAAAAAATCTATAATCAAGAAAACATAAGCAACAAAATGTAATTAATGTGAGTATAATAGAAATAATAAATAATTTAAGTACTTACGAGAAATTTTGTATTTTCCGATGAATTAGATAATGAGGTTCCAATTCTAGGTTATGTTTCAGGAAGGATTTGACACAGTTTTATCCATATACTAGCTGATGCTTTTCAATGCGTCGGAAAAATCTATTTTTCCCGATGGTTTTCTCACCATCGAGAAAGAGTAACTATTCCGACGACATTTAAAATACTATCGGGGATAGCCTTGTTTGCCCAATGATAATTTCTTAGGCATCAGGCAAAAGTTTGAAGGGACAAACTTTTTGGAACTATCCCGACGCGCTAGATCTACCCCCAACGCTAATATAGCATCGGGATACGACTTTTTAGATTCCCCTTTTTCATTCCCTTCTCCTGTCCAAGATCCACCTGCTGGGATTAAAATTCAAGTGCGGTGGAAACATATCAAAACTCTATCTCAAAATTAATTTTAAAATTTTAAAATACTTCTACATTGGTAAAATAAATCTAAAATAATCTAGGTTAAGCATATTGAATATAAGAAAAAACAAATTATCAGAGAAGAAAAAAACTTACATGTTGTGTCACCACTAATTGGAGACCTTCCTTTTCTTTGAATCTTGAAGAAAGGTTTGTGGAAATTTTTTTTTTTTTTTTGGCAAAGAGAAAAAAACGCAGAGAAGTTTTGAGAGAATTTTTTTAGAGAGAATGAACGATTCCATTTTTCTTCGGTTAGATGCTATATAAGGAAGCGAGAGAAAATGGGAAATGTGGTGTTATCCCACGTATTAAGTAACTCCCCTACGTGGGAGTTACAACTAATTTAATATTAATTAAATTAATAATTAATAATAAATTAATAATTAATAATCAATTAAATCTAATTTGATTAACCAATTCATTTAAATCATATTTAAATGAATATCTCTCACATAACCTATAGTTTTAATTCAATTAATCTAGTTAAATCAAATTTAATTAAATTAGATTAAAGCAAATTAAATTAAATTAGATTAAATTAAATAACTAATGAATTCTCCAATTAATTAATTACCAAATTAAATATCAAATGTTTAATTTTAACCTGCATTTGAATCAATTTCAAATACATTTCTCTCATAACCTATAGTTTTAATTCAATTAATCTAGTTAAATCAAATTTAATTAAATTAGATTAAAGCAAATTAAATTAAATTAGATTAAATTAAATAACTAATTAATTCTCCAATTAATTAATTACCAAATTAAATATCAAATATTTAATTTTAACCTGCATTTGAATCAAATTCAAATACATTTCTCTCATAACCTATAGCTTTAATGTACATCTAATGCACATTAATTTTAACCTATAGTTTTAATAAAAATCTAATTCATATTAAAATAATATTTGAACAATTTCAAATATTTAATTCTCTTACAAATTAACTTTGAATCATATCCAAAATTATATTTATACTATAAAGTTTAATTTGTAAAATAAACTTTATATTATAATGTATCATTATACATTATACTTTTCCCTTAGTAAATTTGAACTTTTCAAAATTTCAACCAATAATAAATTACCTCAATATTCTTTACGAGCTAGGAAGGGGACCTAATGGACCTACAAATCAGAAGCTCCAACGATATGAGATTAACGGGCTAAACTCATTAACCACATTAATCAATATTCGTTAACTGTTTGTACACTCCACTAAAGACCCACAGTTGCACTCTTCTCACTGTAAATATATTTCTGTGTCCACGGATATAGACCAATAACAGCAAGTTAGTCCTTCACAAGTGTTCGTAACACCAACGGGGTCAAATTACCGTTATACCCCTGGGTTACTTCTAAATCCTTAAGTACCAGTGCTCTTCTAATGAACAACCTGTTTATAGTCCAACCATCAAACAGAAACCCCTCTCGGGCTAGTGAGAGGGTAGGGCCCTTTGTTCAAGTCCCGGAGACACCACTTAAGGGAACATTTATCTACTTACCCTAAAGTCGGGAAGGAGTGAAATCCATCTTGTATAATTATGTTCTCAGCTCCCCACTCAGTCTTGTCCCCAAAATGGTAGGCATATCGAGTCGGCAAAGGGGCCACTCTCACCCATACAAATCAAAGGACAATCCCTTGTGAACAGGAGTTCATAATATACTCAAGATTAAGACTAAGTTGTCTAGGTTAACCTATTGAAATAGAAACCTAACCAGTCGACGGAGTTACATCTAGTGGTTACTATTTCGTGGTCTAGTCTTATGCAAACTCATTGCATAGGATACCCCCACTTGCATTCTCCTACACGAACGCGTTGGATCATTGCGTTTGTATCAAATACAAAGTGGGTCGTATCCATAGTGTTACCAGGATAAGGTACCCAACCCTATCCTTATACTATAGACTCTTTCGGCTGTAACTTGAACATTGATCTCTATATGTCTCTACATATTGTTCAAGACTCATAAAACAACTTAAGATGTTAGTTTATTGGATTTTAGGGTTATTAAAACAAGATAAAATAATCAATAACATTTATTGAATAATAATGAATAACCATTTATTAATGACGGTCAAAATACAACATTTACTATCTACGAGTTTTAGGGCATAAAACCCAACACCACCTCCCCTCTTTTTTAAAAAGTGTTGAATATTTATTGACTAATTTTAATTTTTTGAATTTTTTTAATATTTTTTTAAGAAATATCTATCAAATTGACATTTTATTGGTATTTTCATTGATAATACTTGTAAAATTGAGATCTAGATATTTCTATCGACATCGACATTTTAAACCTTGATTATATTTAGAGAGCATTTGTACAAAGTTAAAGAATATGTTTTAAATACAATTTGGCCTATATTTTACTAATTTTTATATTAAATTTATAATAAACAATTAAGATTTTTAAAAGTTATTTATTTAAATATTTTATTAACTTTTTATTTTTTTTGTTGTTATTTTTTTTTATTTTAAAATCAATCAAACCATCTTTTTTTTTTAAGTATCGTTTTGATAGATATTAAATATATATATTTCTCTTTAATGAATAGTTACATATCTACATTTATCTTTTTATTTTAAACTTTAAAATTTGAGACTATTTTATCTTCAACAAAATTCTTAATAAGGGTGAATAAATATAATGTATTTTAAAATTAGGTGAATAAATATAATGTATTTTAAAATTATTCTCATGTTTAATAAATACGATTTTACTTACAATATTTCCCCCCCGAAAAGTACTTATAATATAAACATTGTAAATTATTGTAATTTAAAATCCTTAATCATGACTTAAAATGTTAGAATTTTTTTTTTCTCTAATTTAATATCCTATTCTAATTATTTAGATGTCCTAATTATTTGTTTTTATTTAGTTTATTATATCTGGATTAAAGTAATAACTTTTTTTGGTTTAAGATAAATATATAATCTTTAATCAAAGAGTTTTTCAAACTTATTTGAATGGAGAATTTCTAACCATATTAACTATGTAAACATTACAATATTATATATTTTATTATTTGCCTTTTTTTTTTTCACGGACAATGCTAAAATTTTCTTATCCGAACAGAAAATCTTAAAATCTATTTATTTAAATAAATAAATAATAATACTAACTTTAATTTAAAATTATATAAAATATTCCTAAAATTAGTAGGAGTGTGAGTCACGTTCCATTAAATTCTCCTTCTTACAACAAACAAGGAATTATCGTAACAAATTTCCTAATTCTATTGGTATTAGGTGTTTATCCAAATTCCCTTAATCTCTTCTCTATAAATTGTTGAGTCTGAGCGTTGATATTTCACAAATCACTCACTTCCCATCTTCATCATCAGATTAATCTCTCAACACATTTAAGCTTTCTTTTCATTCCTTCTAATAGTTATGGACATAGATTTGACCCCTCAATTGCCAAAAAAGGTCTACGGTGGCGATGGAGGCTCCTATTATTCGTGGTCTCCCAAGGAACTTTCCATGTTTCGTGAAGGAAACATTGGTGCATCCAAGCTCGCTCTCGAGAAGAATGGTTTCGCTCTACTCCGATTCCGCTAAAGTCGCTTACGTTCTTCAAGGTATTTTTTCAATTCTGGTCACATTTGAACTATTGTTGTTATTTTAAGATATACAAATCTAATCGATGTGCAAAATATTATAGGCAATGGAGTAGCCGGATGTACAAAATATTATAGGCAATGGAGTAGCCGGAATCATTTTGCCAGAATCCGAGGAGAAGGTGATCACAATCAAGAAAGGAGATGCTATCGATCTTCCATTTGGTGTGGTAACTTGGTGGTTTAACAAAGAAGCCACCGATTTGGTGGTTCTATTTTTGGGCGACACATCCAAGGCTCACAAATCAGGCGAGTTCACCGACTTCTTCCTAACTGGCGCTAACGGAATCTTCACTGGCTTTTCCACGGAGTTCCGGAATCTTCACTGGCTTTTCTTCCTAACTGGCGCTAACGAAATCTTCACTGGCTTTTCCACAGAGTTCTGGAATCTTCACTAGCTTTTTCACGGAGTTCGTTGGACGTGCTTGGGATATGGATGAAACATTAGTGAAATCTCTAGTGAAAAATCAAATTGGAACTGGAATTGTGAAGCTGAAAGAAGGAACGAAGATGCCAGAGGCAAAGAAGGAGCATTGA

mRNA sequence

ATGGATACTAGCTTACGTACACCTCGACTAATCTCAAAGGCAGAGATCGTATTTTCTATTTTCTCTCAAGATTATTCAGCCATCAAACGTATAAGAAGAAGGTCTACGGTGGCGATGGAGGCTCCTATTATTCGTGGTCTCCCAAGGAACTTTCCATGTTTCGTGAAGGAAACATTGGTGCATCCAAGCTCGCTCTCGAGAAGAATGGTTTCGCTCTACTCCGATTCCGCTAAAGTCGCTTACGTTCTTCAAGGCAATGGAGTAGCCGGAATCATTTTGCCAGAATCCGAGGAGAAGGTGATCACAATCAAGAAAGGAGATGCTATCGATCTTCCATTTGGTGTGGTAACTTGGTGGTTTAACAAAGAAGCCACCGATTTGGTGGTTCTATTTTTGGGCGACACATCCAAGGCTCACAAATCAGGCGAGTTCACCGACTTCTTCCTAACTGGCGCTAACGGAATCTTCACTGGCTTTTCCACGGAGTTCCGGAATCTTCACTGGCTTTTCTTCCTAACTGGCGCTAACGAAATCTTCACTGGCTTTTCCACAGACTTTTTCACGGAGTTCGTTGGACGTGCTTGGGATATGGATGAAACATTAGTGAAATCTCTAGTGAAAAATCAAATTGGAACTGGAATTGTGAAGCTGAAAGAAGGAACGAAGATGCCAGAGGCAAAGAAGGAGCATTGA

Coding sequence (CDS)

ATGGATACTAGCTTACGTACACCTCGACTAATCTCAAAGGCAGAGATCGTATTTTCTATTTTCTCTCAAGATTATTCAGCCATCAAACGTATAAGAAGAAGGTCTACGGTGGCGATGGAGGCTCCTATTATTCGTGGTCTCCCAAGGAACTTTCCATGTTTCGTGAAGGAAACATTGGTGCATCCAAGCTCGCTCTCGAGAAGAATGGTTTCGCTCTACTCCGATTCCGCTAAAGTCGCTTACGTTCTTCAAGGCAATGGAGTAGCCGGAATCATTTTGCCAGAATCCGAGGAGAAGGTGATCACAATCAAGAAAGGAGATGCTATCGATCTTCCATTTGGTGTGGTAACTTGGTGGTTTAACAAAGAAGCCACCGATTTGGTGGTTCTATTTTTGGGCGACACATCCAAGGCTCACAAATCAGGCGAGTTCACCGACTTCTTCCTAACTGGCGCTAACGGAATCTTCACTGGCTTTTCCACGGAGTTCCGGAATCTTCACTGGCTTTTCTTCCTAACTGGCGCTAACGAAATCTTCACTGGCTTTTCCACAGACTTTTTCACGGAGTTCGTTGGACGTGCTTGGGATATGGATGAAACATTAGTGAAATCTCTAGTGAAAAATCAAATTGGAACTGGAATTGTGAAGCTGAAAGAAGGAACGAAGATGCCAGAGGCAAAGAAGGAGCATTGA

Protein sequence

MDTSLRTPRLISKAEIVFSIFSQDYSAIKRIRRRSTVAMEAPIIRGLPRNFPCFVKETLVHPSSLSRRMVSLYSDSAKVAYVLQGNGVAGIILPESEEKVITIKKGDAIDLPFGVVTWWFNKEATDLVVLFLGDTSKAHKSGEFTDFFLTGANGIFTGFSTEFRNLHWLFFLTGANEIFTGFSTDFFTEFVGRAWDMDETLVKSLVKNQIGTGIVKLKEGTKMPEAKKEH
BLAST of Lsi03G007090 vs. Swiss-Prot
Match: LEGB_GOSHI (Legumin B OS=Gossypium hirsutum GN=LEGB PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.6e-06
Identity = 51/211 (24.17%), Postives = 88/211 (41.71%), Query Frame = 1

Query: 51  FPCFVKETLVHPSSLSRRMVSLYSDSAKVAYVLQGNGVAGIILP---------------- 110
           F C     L H       ++  ++ +  + YV QG G+ G + P                
Sbjct: 81  FQCAGVAFLRHKIQRKGLLLPSFTSAPMLFYVEQGEGIHGAVFPGCPETYQSQSQQNIQD 140

Query: 111 ----ESEEKVITIKKGDAIDLPFGVVTWWFNKEATDLVVLFLGDT-SKAHKSGE-FTDFF 170
               +  +K+  +K+GD + LP GV  W FN   + LV++ L D  + A++  E F  FF
Sbjct: 141 RPQRDQHQKLRRLKEGDVVALPAGVAHWIFNNGRSQLVLVALVDVGNDANQLDENFRKFF 200

Query: 171 LTGA--NGIFTGFSTEFRNLHWLFFL-----------TGANEIFTGFSTDFFTEFVGRAW 226
           L G+   G+  G  +  RN                  +G N + +GF  +     + +A+
Sbjct: 201 LAGSPQGGVVRGGQSRDRNQRQSRTQRGEREEEESQESGGNNVLSGFRDN----LLAQAF 260

BLAST of Lsi03G007090 vs. TrEMBL
Match: A0A0A0K666_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G281380 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.1e-59
Identity = 125/158 (79.11%), Postives = 125/158 (79.11%), Query Frame = 1

Query: 73  YSDSAKVAYVLQGNGVAGIILPESEEKVITIKKGDAIDLPFGVVTWWFNKEATDLVVLFL 132
           YSDSAKVAYVLQGNGVAGIILPESEEKVI IKKGDAI LPFGVVTWWFNKEATDLVVLFL
Sbjct: 54  YSDSAKVAYVLQGNGVAGIILPESEEKVIAIKKGDAIALPFGVVTWWFNKEATDLVVLFL 113

Query: 133 GDTSKAHKSGEFTDFFLTGANGIFTGFSTEFRNLHWLFFLTGANEIFTGFSTDFFTEFVG 192
           GDTSKAHKSGEFTDFFLTGANGIFTGFSTE                           FVG
Sbjct: 114 GDTSKAHKSGEFTDFFLTGANGIFTGFSTE---------------------------FVG 173

Query: 193 RAWDMDETLVKSLVKNQIGTGIVKLKEGTKMPEAKKEH 231
           RAWDMDE  VKSLVKNQ GTGIVKLKEGTKMPE KKEH
Sbjct: 174 RAWDMDEASVKSLVKNQTGTGIVKLKEGTKMPEPKKEH 184

BLAST of Lsi03G007090 vs. TrEMBL
Match: W9SME0_9ROSA (Glutelin type-B 5 OS=Morus notabilis GN=L484_010853 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.5e-51
Identity = 107/158 (67.72%), Postives = 120/158 (75.95%), Query Frame = 1

Query: 73  YSDSAKVAYVLQGNGVAGIILPESEEKVITIKKGDAIDLPFGVVTWWFNKEATDLVVLFL 132
           YSDS+KVAYVLQG GVAGI+LPESEEKVI IKKGDAI LPFGVVTWW+NKE T+LVVLFL
Sbjct: 54  YSDSSKVAYVLQGQGVAGIVLPESEEKVIAIKKGDAIALPFGVVTWWYNKEDTELVVLFL 113

Query: 133 GDTSKAHKSGEFTDFFLTGANGIFTGFSTEFRNLHWLFFLTGANEIFTGFSTDFFTEFVG 192
           GDTSKAHK+GEFTDFFLTG+NG+FTGFS                           TEFV 
Sbjct: 114 GDTSKAHKAGEFTDFFLTGSNGVFTGFS---------------------------TEFVS 173

Query: 193 RAWDMDETLVKSLVKNQIGTGIVKLKEGTKMPEAKKEH 231
           RAWD++E +VK+LV NQ   GIVKL+EG K+PEAKKEH
Sbjct: 174 RAWDLEENVVKTLVGNQSANGIVKLQEGFKLPEAKKEH 184

BLAST of Lsi03G007090 vs. TrEMBL
Match: W9RVS5_9ROSA (Glutelin type-A 1 OS=Morus notabilis GN=L484_018618 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 5.5e-51
Identity = 106/158 (67.09%), Postives = 119/158 (75.32%), Query Frame = 1

Query: 73  YSDSAKVAYVLQGNGVAGIILPESEEKVITIKKGDAIDLPFGVVTWWFNKEATDLVVLFL 132
           YSDS+KVAYVLQGNGVAGI+LPESEEKV+ IKKGD+I LPFGVVTWW+NKE TDLVVLFL
Sbjct: 54  YSDSSKVAYVLQGNGVAGIVLPESEEKVVAIKKGDSIALPFGVVTWWYNKEDTDLVVLFL 113

Query: 133 GDTSKAHKSGEFTDFFLTGANGIFTGFSTEFRNLHWLFFLTGANEIFTGFSTDFFTEFVG 192
           GDTSKAHK+GEFTDF+LTG NGIFTGFS                           TEFVG
Sbjct: 114 GDTSKAHKAGEFTDFYLTGCNGIFTGFS---------------------------TEFVG 173

Query: 193 RAWDMDETLVKSLVKNQIGTGIVKLKEGTKMPEAKKEH 231
           RAWD++E +VK+LV  Q G GIVKL+EG  +PE KKEH
Sbjct: 174 RAWDLEEDVVKTLVGRQSGQGIVKLQEGFNLPEPKKEH 184

BLAST of Lsi03G007090 vs. TrEMBL
Match: B9SYN7_RICCO (Nutrient reservoir, putative OS=Ricinus communis GN=RCOM_0787760 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.0e-49
Identity = 104/158 (65.82%), Postives = 114/158 (72.15%), Query Frame = 1

Query: 73  YSDSAKVAYVLQGNGVAGIILPESEEKVITIKKGDAIDLPFGVVTWWFNKEATDLVVLFL 132
           YSDSAKVAYVLQGNGVAGI+LPE EEKVI IKKGDA+ LPFGVVTWW+NKE T+LVVLF+
Sbjct: 56  YSDSAKVAYVLQGNGVAGIVLPEKEEKVIAIKKGDAVALPFGVVTWWYNKEDTELVVLFM 115

Query: 133 GDTSKAHKSGEFTDFFLTGANGIFTGFSTEFRNLHWLFFLTGANEIFTGFSTDFFTEFVG 192
           GDT+K HK+GEFTDFFLTG NGIFTGFS                           +EFVG
Sbjct: 116 GDTAKGHKAGEFTDFFLTGTNGIFTGFS---------------------------SEFVG 175

Query: 193 RAWDMDETLVKSLVKNQIGTGIVKLKEGTKMPEAKKEH 231
           RAWD+DE  V +LV NQ G GIVKL    KMPE KKEH
Sbjct: 176 RAWDLDEKTVGTLVNNQSGKGIVKLAASFKMPEPKKEH 186

BLAST of Lsi03G007090 vs. TrEMBL
Match: A5ARE0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g04060 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 4.0e-49
Identity = 105/158 (66.46%), Postives = 117/158 (74.05%), Query Frame = 1

Query: 73  YSDSAKVAYVLQGNGVAGIILPESEEKVITIKKGDAIDLPFGVVTWWFNKEATDLVVLFL 132
           YSDS+KVAYVLQGNGVAGI+LPESEEKV+ IKKGDA+ LPFGVVTWW+NKE TDL VLFL
Sbjct: 54  YSDSSKVAYVLQGNGVAGIVLPESEEKVVPIKKGDALALPFGVVTWWYNKEDTDLEVLFL 113

Query: 133 GDTSKAHKSGEFTDFFLTGANGIFTGFSTEFRNLHWLFFLTGANEIFTGFSTDFFTEFVG 192
           GDTSKAHK+GEFTDFFLTG+NGIFTGFS                           TEFV 
Sbjct: 114 GDTSKAHKAGEFTDFFLTGSNGIFTGFS---------------------------TEFVS 173

Query: 193 RAWDMDETLVKSLVKNQIGTGIVKLKEGTKMPEAKKEH 231
           RAWD++E +VKSLV  Q G GIVKL+   +MPE KKEH
Sbjct: 174 RAWDLEEDVVKSLVGKQSGKGIVKLEGTFEMPEPKKEH 184

BLAST of Lsi03G007090 vs. TAIR10
Match: AT2G28680.1 (AT2G28680.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 190.7 bits (483), Expect = 1.0e-48
Identity = 98/156 (62.82%), Postives = 109/156 (69.87%), Query Frame = 1

Query: 73  YSDSAKVAYVLQGNGVAGIILPESEEKVITIKKGDAIDLPFGVVTWWFNKEATDLVVLFL 132
           YSDS KVAYVLQG G AGI+LPE EEKVI IKKGD+I LPFGVVTWWFN E T+LVVLFL
Sbjct: 54  YSDSPKVAYVLQGAGTAGIVLPEKEEKVIAIKKGDSIALPFGVVTWWFNNEDTELVVLFL 113

Query: 133 GDTSKAHKSGEFTDFFLTGANGIFTGFSTEFRNLHWLFFLTGANEIFTGFSTDFFTEFVG 192
           G+T K HK+G+FTDF+LTG+NGIFTGFSTE                           FVG
Sbjct: 114 GETHKGHKAGQFTDFYLTGSNGIFTGFSTE---------------------------FVG 173

Query: 193 RAWDMDETLVKSLVKNQIGTGIVKLKEGTKMPEAKK 229
           RAWD+DET VK LV +Q G GIVK+    KMPE KK
Sbjct: 174 RAWDLDETTVKKLVGSQTGNGIVKVDASLKMPEPKK 182

BLAST of Lsi03G007090 vs. TAIR10
Match: AT1G07750.1 (AT1G07750.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-47
Identity = 95/161 (59.01%), Postives = 112/161 (69.57%), Query Frame = 1

Query: 70  VSLYSDSAKVAYVLQGNGVAGIILPESEEKVITIKKGDAIDLPFGVVTWWFNKEATDLVV 129
           V  YSDS+KVAYVLQG+G AGI+LPE EEKVI IK+GD+I LPFGVVTWWFN E  +LV+
Sbjct: 51  VPRYSDSSKVAYVLQGSGTAGIVLPEKEEKVIAIKQGDSIALPFGVVTWWFNNEDPELVI 110

Query: 130 LFLGDTSKAHKSGEFTDFFLTGANGIFTGFSTEFRNLHWLFFLTGANEIFTGFSTDFFTE 189
           LFLG+T K HK+G+FT+F+LTG NGIFTGFS                           TE
Sbjct: 111 LFLGETHKGHKAGQFTEFYLTGTNGIFTGFS---------------------------TE 170

Query: 190 FVGRAWDMDETLVKSLVKNQIGTGIVKLKEGTKMPEAKKEH 231
           FVGRAWD+DE  VK LV +Q G GIVKL  G KMP+ K+E+
Sbjct: 171 FVGRAWDLDENTVKKLVGSQTGNGIVKLDAGFKMPQPKEEN 184

BLAST of Lsi03G007090 vs. NCBI nr
Match: gi|449465356|ref|XP_004150394.1| (PREDICTED: glutelin type-B 5-like isoform X1 [Cucumis sativus])

HSP 1 Score: 238.0 bits (606), Expect = 1.6e-59
Identity = 125/158 (79.11%), Postives = 125/158 (79.11%), Query Frame = 1

Query: 73  YSDSAKVAYVLQGNGVAGIILPESEEKVITIKKGDAIDLPFGVVTWWFNKEATDLVVLFL 132
           YSDSAKVAYVLQGNGVAGIILPESEEKVI IKKGDAI LPFGVVTWWFNKEATDLVVLFL
Sbjct: 54  YSDSAKVAYVLQGNGVAGIILPESEEKVIAIKKGDAIALPFGVVTWWFNKEATDLVVLFL 113

Query: 133 GDTSKAHKSGEFTDFFLTGANGIFTGFSTEFRNLHWLFFLTGANEIFTGFSTDFFTEFVG 192
           GDTSKAHKSGEFTDFFLTGANGIFTGFSTE                           FVG
Sbjct: 114 GDTSKAHKSGEFTDFFLTGANGIFTGFSTE---------------------------FVG 173

Query: 193 RAWDMDETLVKSLVKNQIGTGIVKLKEGTKMPEAKKEH 231
           RAWDMDE  VKSLVKNQ GTGIVKLKEGTKMPE KKEH
Sbjct: 174 RAWDMDEASVKSLVKNQTGTGIVKLKEGTKMPEPKKEH 184

BLAST of Lsi03G007090 vs. NCBI nr
Match: gi|778726347|ref|XP_011659088.1| (PREDICTED: 11S globulin seed storage protein 2-like isoform X2 [Cucumis sativus])

HSP 1 Score: 236.1 bits (601), Expect = 6.1e-59
Identity = 124/158 (78.48%), Postives = 125/158 (79.11%), Query Frame = 1

Query: 73  YSDSAKVAYVLQGNGVAGIILPESEEKVITIKKGDAIDLPFGVVTWWFNKEATDLVVLFL 132
           YSDSAKVAYVLQG+GVAGIILPESEEKVI IKKGDAI LPFGVVTWWFNKEATDLVVLFL
Sbjct: 54  YSDSAKVAYVLQGSGVAGIILPESEEKVIAIKKGDAIALPFGVVTWWFNKEATDLVVLFL 113

Query: 133 GDTSKAHKSGEFTDFFLTGANGIFTGFSTEFRNLHWLFFLTGANEIFTGFSTDFFTEFVG 192
           GDTSKAHKSGEFTDFFLTGANGIFTGFSTE                           FVG
Sbjct: 114 GDTSKAHKSGEFTDFFLTGANGIFTGFSTE---------------------------FVG 173

Query: 193 RAWDMDETLVKSLVKNQIGTGIVKLKEGTKMPEAKKEH 231
           RAWDMDE  VKSLVKNQ GTGIVKLKEGTKMPE KKEH
Sbjct: 174 RAWDMDEASVKSLVKNQTGTGIVKLKEGTKMPEPKKEH 184

BLAST of Lsi03G007090 vs. NCBI nr
Match: gi|659123123|ref|XP_008461502.1| (PREDICTED: glutelin type-A 1-like [Cucumis melo])

HSP 1 Score: 236.1 bits (601), Expect = 6.1e-59
Identity = 124/158 (78.48%), Postives = 125/158 (79.11%), Query Frame = 1

Query: 73  YSDSAKVAYVLQGNGVAGIILPESEEKVITIKKGDAIDLPFGVVTWWFNKEATDLVVLFL 132
           YSDSAKVAYVLQG+GVAGIILPESEEKVI IKKGDAI LPFGVVTWWFNKEATDLVVLFL
Sbjct: 54  YSDSAKVAYVLQGSGVAGIILPESEEKVIAIKKGDAIALPFGVVTWWFNKEATDLVVLFL 113

Query: 133 GDTSKAHKSGEFTDFFLTGANGIFTGFSTEFRNLHWLFFLTGANEIFTGFSTDFFTEFVG 192
           GDTSKAHKSGEFTDFFLTGANGIFTGFSTE                           FVG
Sbjct: 114 GDTSKAHKSGEFTDFFLTGANGIFTGFSTE---------------------------FVG 173

Query: 193 RAWDMDETLVKSLVKNQIGTGIVKLKEGTKMPEAKKEH 231
           RAWDMDE  VKSLVKNQ GTGIVKLKEGTKMPE KKEH
Sbjct: 174 RAWDMDEASVKSLVKNQTGTGIVKLKEGTKMPEPKKEH 184

BLAST of Lsi03G007090 vs. NCBI nr
Match: gi|703161932|ref|XP_010112922.1| (Glutelin type-B 5 [Morus notabilis])

HSP 1 Score: 210.3 bits (534), Expect = 3.6e-51
Identity = 107/158 (67.72%), Postives = 120/158 (75.95%), Query Frame = 1

Query: 73  YSDSAKVAYVLQGNGVAGIILPESEEKVITIKKGDAIDLPFGVVTWWFNKEATDLVVLFL 132
           YSDS+KVAYVLQG GVAGI+LPESEEKVI IKKGDAI LPFGVVTWW+NKE T+LVVLFL
Sbjct: 54  YSDSSKVAYVLQGQGVAGIVLPESEEKVIAIKKGDAIALPFGVVTWWYNKEDTELVVLFL 113

Query: 133 GDTSKAHKSGEFTDFFLTGANGIFTGFSTEFRNLHWLFFLTGANEIFTGFSTDFFTEFVG 192
           GDTSKAHK+GEFTDFFLTG+NG+FTGFS                           TEFV 
Sbjct: 114 GDTSKAHKAGEFTDFFLTGSNGVFTGFS---------------------------TEFVS 173

Query: 193 RAWDMDETLVKSLVKNQIGTGIVKLKEGTKMPEAKKEH 231
           RAWD++E +VK+LV NQ   GIVKL+EG K+PEAKKEH
Sbjct: 174 RAWDLEENVVKTLVGNQSANGIVKLQEGFKLPEAKKEH 184

BLAST of Lsi03G007090 vs. NCBI nr
Match: gi|703105985|ref|XP_010098386.1| (Glutelin type-A 1 [Morus notabilis])

HSP 1 Score: 209.1 bits (531), Expect = 7.9e-51
Identity = 106/158 (67.09%), Postives = 119/158 (75.32%), Query Frame = 1

Query: 73  YSDSAKVAYVLQGNGVAGIILPESEEKVITIKKGDAIDLPFGVVTWWFNKEATDLVVLFL 132
           YSDS+KVAYVLQGNGVAGI+LPESEEKV+ IKKGD+I LPFGVVTWW+NKE TDLVVLFL
Sbjct: 54  YSDSSKVAYVLQGNGVAGIVLPESEEKVVAIKKGDSIALPFGVVTWWYNKEDTDLVVLFL 113

Query: 133 GDTSKAHKSGEFTDFFLTGANGIFTGFSTEFRNLHWLFFLTGANEIFTGFSTDFFTEFVG 192
           GDTSKAHK+GEFTDF+LTG NGIFTGFS                           TEFVG
Sbjct: 114 GDTSKAHKAGEFTDFYLTGCNGIFTGFS---------------------------TEFVG 173

Query: 193 RAWDMDETLVKSLVKNQIGTGIVKLKEGTKMPEAKKEH 231
           RAWD++E +VK+LV  Q G GIVKL+EG  +PE KKEH
Sbjct: 174 RAWDLEEDVVKTLVGRQSGQGIVKLQEGFNLPEPKKEH 184

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
LEGB_GOSHI4.6e-0624.17Legumin B OS=Gossypium hirsutum GN=LEGB PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0K666_CUCSA1.1e-5979.11Uncharacterized protein OS=Cucumis sativus GN=Csa_7G281380 PE=4 SV=1[more]
W9SME0_9ROSA2.5e-5167.72Glutelin type-B 5 OS=Morus notabilis GN=L484_010853 PE=4 SV=1[more]
W9RVS5_9ROSA5.5e-5167.09Glutelin type-A 1 OS=Morus notabilis GN=L484_018618 PE=4 SV=1[more]
B9SYN7_RICCO3.0e-4965.82Nutrient reservoir, putative OS=Ricinus communis GN=RCOM_0787760 PE=4 SV=1[more]
A5ARE0_VITVI4.0e-4966.46Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g04060 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT2G28680.11.0e-4862.82 RmlC-like cupins superfamily protein[more]
AT1G07750.11.1e-4759.01 RmlC-like cupins superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449465356|ref|XP_004150394.1|1.6e-5979.11PREDICTED: glutelin type-B 5-like isoform X1 [Cucumis sativus][more]
gi|778726347|ref|XP_011659088.1|6.1e-5978.48PREDICTED: 11S globulin seed storage protein 2-like isoform X2 [Cucumis sativus][more]
gi|659123123|ref|XP_008461502.1|6.1e-5978.48PREDICTED: glutelin type-A 1-like [Cucumis melo][more]
gi|703161932|ref|XP_010112922.1|3.6e-5167.72Glutelin type-B 5 [Morus notabilis][more]
gi|703105985|ref|XP_010098386.1|7.9e-5167.09Glutelin type-A 1 [Morus notabilis][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0045735nutrient reservoir activity
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR011051RmlC_Cupin_sf
IPR006045Cupin_1
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0045735 nutrient reservoir activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G007090.1Lsi03G007090.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 74..155
score: 7.7
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 57..178
score: 5.
IPR011051RmlC-like cupin domainunknownSSF51182RmlC-like cupinscoord: 69..164
score: 3.22
IPR014710RmlC-like jelly roll foldGENE3DG3DSA:2.60.120.10coord: 172..226
score: 7.2E-5coord: 73..163
score: 8.4
NoneNo IPR availablePANTHERPTHR31189FAMILY NOT NAMEDcoord: 174..225
score: 1.2E-75coord: 73..156
score: 1.2
NoneNo IPR availablePANTHERPTHR31189:SF8CUPIN FAMILY PROTEINcoord: 174..225
score: 1.2E-75coord: 73..156
score: 1.2