Lsi03G006170 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G006170
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Location	chr03 : 7699427 .. 7699859 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAAAGCTACCCTAAGAATTACGTTGCTGCCCACAATGCCATTCGTTCGCAGGTTGGTGTTGAGCCCCTCCATTGGAACACCACCTTGGCAGTGTATGCTCAAAATTACGCCAACACAAAGATTGCCACATGCCAAATGGAGCACTCTAGAGGACCTTATGGCGAAAACTTAGCGGAGGGATACGAAGTGATGACAGCAGAGACGGCAGTAAGTCTCTGGGCTGATGAGAAGAAACATTATGACTACAATTCTAACGCGTGTGTTAATGACTCTAGTCATTGCCTCCATTATACACAGTTGGTATGGAGGAACACAAAATCTCTTGGTTGTGCCCAAGTGAAGTGTCAAAACAATTGGGTTTTTCTAATTTGCAACTATTATCCTCCAGGCAACTATATGGGCCAACGTCCATATTGAAAGTAGATGA

mRNA sequence

ATGGCCAAAAGCTACCCTAAGAATTACGTTGCTGCCCACAATGCCATTCGTTCGCAGGTTGGTGTTGAGCCCCTCCATTGGAACACCACCTTGGCAGTGTATGCTCAAAATTACGCCAACACAAAGATTGCCACATGCCAAATGGAGCACTCTAGAGGACCTTATGGCGAAAACTTAGCGGAGGGATACGAAGTGATGACAGCAGAGACGGCAGTAAGTCTCTGGGCTGATGAGAAGAAACATTATGACTACAATTCTAACGCGTGTGTTAATGACTCTAGTCATTGCCTCCATTATACACAGTTGGCAACTATATGGGCCAACGTCCATATTGAAAGTAGATGA

Coding sequence (CDS)

ATGGCCAAAAGCTACCCTAAGAATTACGTTGCTGCCCACAATGCCATTCGTTCGCAGGTTGGTGTTGAGCCCCTCCATTGGAACACCACCTTGGCAGTGTATGCTCAAAATTACGCCAACACAAAGATTGCCACATGCCAAATGGAGCACTCTAGAGGACCTTATGGCGAAAACTTAGCGGAGGGATACGAAGTGATGACAGCAGAGACGGCAGTAAGTCTCTGGGCTGATGAGAAGAAACATTATGACTACAATTCTAACGCGTGTGTTAATGACTCTAGTCATTGCCTCCATTATACACAGTTGGCAACTATATGGGCCAACGTCCATATTGAAAGTAGATGA

Protein sequence

MAKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAEGYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWANVHIESR

Homology

[Close]

BLAST of Lsi03G006170 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 8.8e-27
Identity = 57/107 (53.27%), Postives = 72/107 (67.29%), Query Frame = 1


Query: 2   AKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAE 61
           A++ P++Y+  HNA R QVGV P+ W+  LA YAQNYAN +I  C M HS GPYGENLA 
Sbjct: 23  AQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGPYGENLAA 82

Query: 62  GYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
            +  + A  AV +W DEK+ YDYNSN+CV     C HYTQ+  +W N
Sbjct: 83  AFPQLNAAGAVKMWVDEKRFYDYNSNSCV--GGVCGHYTQV--VWRN 125

[Close]

BLAST of Lsi03G006170 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-23
Identity = 54/108 (50.00%), Postives = 72/108 (66.67%), Query Frame = 1


Query: 2   AKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAE 61
           A++  ++Y+ AHN  R+ VGVEPL W+  +A YAQNYA+   A C + HS G YGENLAE
Sbjct: 30  AQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHSHGQYGENLAE 89

Query: 62  GY-EVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
           G  + MTA  AV +W DEK++YD++SN C      C HYTQ+  +W N
Sbjct: 90  GSGDFMTAAKAVEMWVDEKQYYDHDSNTCA-QGQVCGHYTQV--VWRN 134

[Close]

BLAST of Lsi03G006170 vs. Swiss-Prot
Match: PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 5.9e-23
Identity = 53/105 (50.48%), Postives = 68/105 (64.76%), Query Frame = 1


Query: 2   AKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAE 61
           A++  +N++ AHNA R +VGV P+ W+  LA YAQNYAN +   C M HS GPYGENLA 
Sbjct: 21  AQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGENLAA 80

Query: 62  GYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIW 107
            +  + A  AV +W DEK+ YDYNSN C      C HYTQ+  +W
Sbjct: 81  AFPQLNAAGAVKMWDDEKQWYDYNSNTCA-PGKVCGHYTQV--VW 122

[Close]

BLAST of Lsi03G006170 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 7.7e-23
Identity = 52/108 (48.15%), Postives = 71/108 (65.74%), Query Frame = 1


Query: 2   AKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAE 61
           A++  ++Y+ AHN  R+ VGVEPL W+  +A YAQNY +   A C + HS G YGENLA+
Sbjct: 30  AQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADCNLVHSHGQYGENLAQ 89

Query: 62  GY-EVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
           G  + MTA  AV +W DEK++YD++SN C      C HYTQ+  +W N
Sbjct: 90  GSGDFMTAAKAVEMWVDEKQYYDHDSNTCA-QGQVCGHYTQV--VWRN 134

[Close]

BLAST of Lsi03G006170 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.8e-22
Identity = 50/107 (46.73%), Postives = 71/107 (66.36%), Query Frame = 1


Query: 2   AKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAE 61
           A+   ++YV AHN  RSQ+GV P+ W+  LA YA+NYAN     C++ HSRGPYGENLA+
Sbjct: 26  AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 62  GYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
               ++   AV+LW +EK +Y+Y++N C   +  C HYTQ+  +W N
Sbjct: 86  SGGDLSGVAAVNLWVNEKANYNYDTNTC---NGVCGHYTQV--VWRN 127

[Close]

BLAST of Lsi03G006170 vs. TrEMBL
Match: A0A0A0K7N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070232 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.5e-46
Identity = 89/108 (82.41%), Postives = 97/108 (89.81%), Query Frame = 1


Query: 1   MAKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLA 60
           +AKS PKNY+ AHNA+R+ VGVEPLHWN+TLA YAQNYANTKIATCQMEHS GPYGENLA
Sbjct: 32  LAKSSPKNYIDAHNAVRAAVGVEPLHWNSTLADYAQNYANTKIATCQMEHSGGPYGENLA 91

Query: 61  EGYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
           EG EVMTAETAVSLWADEKKHYDYNSN C ND S+CLHYTQL  +W+N
Sbjct: 92  EGNEVMTAETAVSLWADEKKHYDYNSNTCSNDPSNCLHYTQL--VWSN 137

[Close]

BLAST of Lsi03G006170 vs. TrEMBL
Match: B9S7U6_RICCO (Protein PRY2, putative OS=Ricinus communis GN=RCOM_1381800 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.9e-28
Identity = 57/112 (50.89%), Postives = 81/112 (72.32%), Query Frame = 1


Query: 1   MAKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLA 60
           +A++ P++YV AHN +R+++GV P+ WN T+A YAQ YAN++I +C+ EHS GPYGEN+A
Sbjct: 22  LAQNSPQDYVNAHNTVRAEIGVGPITWNKTVAAYAQTYANSRIESCEFEHSYGPYGENIA 81

Query: 61  EGYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN-VHI 112
           EGY  +    AV++W  EK +YDY SN+C      CLHYTQ+  +W N VH+
Sbjct: 82  EGYGNLNGVDAVNMWVSEKPNYDYGSNSCKGGEDECLHYTQV--VWRNSVHL 131

[Close]

BLAST of Lsi03G006170 vs. TrEMBL
Match: A0A0A0K4C1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070225 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.3e-28
Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 1


Query: 1   MAKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLA 60
           +A++  +++V AHNA R++VGV P+ WN TLA YAQ YAN KI TC+M+HS GPYGENLA
Sbjct: 25  LAQNSHQDFVNAHNAARAKVGVGPVSWNYTLAAYAQTYANKKIGTCEMQHSYGPYGENLA 84

Query: 61  EGYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIW 107
           EGY  MTA  AV+ W  EKK+YD++SN C+ D   C HYTQ+  +W
Sbjct: 85  EGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGD--ECRHYTQV--VW 126

[Close]

BLAST of Lsi03G006170 vs. TrEMBL
Match: A0A067K0X2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22976 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-27
Identity = 57/107 (53.27%), Postives = 79/107 (73.83%), Query Frame = 1


Query: 1   MAKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLA 60
           +A++ P++YV AHN++R+QVGV P+ WN T+A YAQ YAN++I  C+ EHS GPYGEN+A
Sbjct: 17  LAQNSPQDYVDAHNSVRAQVGVPPITWNRTVAAYAQEYANSRIENCEFEHSYGPYGENIA 76

Query: 61  EGYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWA 108
           EGY  +    AV++W  EK +YD+ SN+CV D   C HYTQ+  +WA
Sbjct: 77  EGYGNLNGVDAVTMWVSEKPNYDHKSNSCVGD--ECFHYTQV--VWA 119

[Close]

BLAST of Lsi03G006170 vs. TrEMBL
Match: E2GEW7_9ROSI (Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.7e-27
Identity = 60/107 (56.07%), Postives = 78/107 (72.90%), Query Frame = 1


Query: 2   AKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAE 61
           A++ P++YV AHNA R+QVGV  + WN T+A YAQNYAN +I+ C + HS GPYGENLA+
Sbjct: 25  AQNSPQDYVNAHNAARAQVGVGSMTWNDTVAAYAQNYANKRISDCNLVHSGGPYGENLAK 84

Query: 62  GYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
           G   +T   AV+LW  EK +YDYNSN+CV     CLHYTQ+  +W+N
Sbjct: 85  GSGSLTGTDAVNLWVGEKPNYDYNSNSCV--GGECLHYTQV--VWSN 127

[Close]

BLAST of Lsi03G006170 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 106.7 bits (265), Expect = 9.7e-24
Identity = 50/107 (46.73%), Postives = 68/107 (63.55%), Query Frame = 1


Query: 2   AKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAE 61
           A+  P++++A HN  R++VGV PL W+  +A YA+NYAN +   C M+HS G YGEN+A 
Sbjct: 26  AQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSSGSYGENIAW 85

Query: 62  GYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
               MT   AV +W DE+  YDY+SN C  D   C HYTQ+  +W N
Sbjct: 86  SSGSMTGVAAVDMWVDEQFDYDYDSNTCAWD-KQCGHYTQV--VWRN 129

[Close]

BLAST of Lsi03G006170 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 106.3 bits (264), Expect = 1.3e-23
Identity = 47/109 (43.12%), Postives = 73/109 (66.97%), Query Frame = 1


Query: 1   MAKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLA 60
           +A+   + ++ AHN  R++VG++PL W+  +A YA +YAN +I  C + HS GP+GEN+A
Sbjct: 21  LAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRINDCALVHSNGPFGENIA 80

Query: 61  EGYEVMTAETAVSLWADEKKHYDYNSNACVN-DSSHCLHYTQLATIWAN 109
                M+AE A  +W +EK++YDY+SN C + +   CLHYTQ+  +W N
Sbjct: 81  MSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQV--VWKN 127

[Close]

BLAST of Lsi03G006170 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 105.9 bits (263), Expect = 1.7e-23
Identity = 52/106 (49.06%), Postives = 70/106 (66.04%), Query Frame = 1


Query: 2   AKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAE 61
           A++ P++Y+ +HN  R+QVGV  + W+TTLA YA NY+N + A C + HS GPYGENLA+
Sbjct: 23  AQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGPYGENLAK 82

Query: 62  G-YEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIW 107
           G     +A +AV LW DEK +Y Y  N C      CLHYTQ+  +W
Sbjct: 83  GSSSSFSAISAVKLWVDEKPYYSYAYNNCTG-GKQCLHYTQV--VW 125

[Close]

BLAST of Lsi03G006170 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 105.5 bits (262), Expect = 2.2e-23
Identity = 50/107 (46.73%), Postives = 71/107 (66.36%), Query Frame = 1


Query: 2   AKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAE 61
           A+   ++YV AHN  RSQ+GV P+ W+  LA YA+NYAN     C++ HSRGPYGENLA+
Sbjct: 26  AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 62  GYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
               ++   AV+LW +EK +Y+Y++N C   +  C HYTQ+  +W N
Sbjct: 86  SGGDLSGVAAVNLWVNEKANYNYDTNTC---NGVCGHYTQV--VWRN 127

[Close]

BLAST of Lsi03G006170 vs. TAIR10
Match: AT2G19990.1 (AT2G19990.1 pathogenesis-related protein-1-like)

HSP 1 Score: 104.8 bits (260), Expect = 3.7e-23
Identity = 48/101 (47.52%), Postives = 64/101 (63.37%), Query Frame = 1


Query: 6   PKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAEGYEV 65
           P+  +  HN  R+ VGV P+ WN TLA YAQ+YA+ +   C M+HS GP+GENLA G+  
Sbjct: 42  PQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAGWGT 101

Query: 66  MTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIW 107
           M+   A   W  EK++YDY+SN C  D   C HYTQ+  +W
Sbjct: 102 MSGPVATEYWMTEKENYDYDSNTCGGDGV-CGHYTQI--VW 139

[Close]

BLAST of Lsi03G006170 vs. NCBI nr
Match: gi|659110139|ref|XP_008455069.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 197.2 bits (500), Expect = 1.5e-47
Identity = 90/108 (83.33%), Postives = 98/108 (90.74%), Query Frame = 1


Query: 1   MAKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLA 60
           +AKSYPKNYV AHNAIR++VGV+PLHWN+TLA YAQNYANTKIATCQMEHS GPYGENLA
Sbjct: 26  LAKSYPKNYVDAHNAIRAEVGVDPLHWNSTLAAYAQNYANTKIATCQMEHSGGPYGENLA 85

Query: 61  EGYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
           EGYE MTAE AVSLWADEKKHYDYNSN C ND+S+CLHYTQL  +W N
Sbjct: 86  EGYEEMTAEMAVSLWADEKKHYDYNSNTCTNDASNCLHYTQL--VWRN 131

[Close]

BLAST of Lsi03G006170 vs. NCBI nr
Match: gi|778724756|ref|XP_004137080.2| (PREDICTED: pathogenesis-related protein 1A-like [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 5.0e-46
Identity = 89/108 (82.41%), Postives = 97/108 (89.81%), Query Frame = 1


Query: 1   MAKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLA 60
           +AKS PKNY+ AHNA+R+ VGVEPLHWN+TLA YAQNYANTKIATCQMEHS GPYGENLA
Sbjct: 32  LAKSSPKNYIDAHNAVRAAVGVEPLHWNSTLADYAQNYANTKIATCQMEHSGGPYGENLA 91

Query: 61  EGYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN 109
           EG EVMTAETAVSLWADEKKHYDYNSN C ND S+CLHYTQL  +W+N
Sbjct: 92  EGNEVMTAETAVSLWADEKKHYDYNSNTCSNDPSNCLHYTQL--VWSN 137

[Close]

BLAST of Lsi03G006170 vs. NCBI nr
Match: gi|255562108|ref|XP_002522062.1| (PREDICTED: basic form of pathogenesis-related protein 1 [Ricinus communis])

HSP 1 Score: 133.3 bits (334), Expect = 2.7e-28
Identity = 57/112 (50.89%), Postives = 81/112 (72.32%), Query Frame = 1


Query: 1   MAKSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLA 60
           +A++ P++YV AHN +R+++GV P+ WN T+A YAQ YAN++I +C+ EHS GPYGEN+A
Sbjct: 22  LAQNSPQDYVNAHNTVRAEIGVGPITWNKTVAAYAQTYANSRIESCEFEHSYGPYGENIA 81

Query: 61  EGYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIWAN-VHI 112
           EGY  +    AV++W  EK +YDY SN+C      CLHYTQ+  +W N VH+
Sbjct: 82  EGYGNLNGVDAVNMWVSEKPNYDYGSNSCKGGEDECLHYTQV--VWRNSVHL 131

[Close]

BLAST of Lsi03G006170 vs. NCBI nr
Match: gi|1009150282|ref|XP_015892937.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Ziziphus jujuba])

HSP 1 Score: 133.3 bits (334), Expect = 2.7e-28
Identity = 65/114 (57.02%), Postives = 81/114 (71.05%), Query Frame = 1


Query: 4   SYPKN-----YVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGEN 63
           SYP++     +V AHNA R++VGV P+ WN T+A YAQNYAN K+  C+MEHS GPYGEN
Sbjct: 25  SYPRSNPNQDFVDAHNAARAEVGVGPITWNWTVAAYAQNYANQKMENCEMEHSGGPYGEN 84

Query: 64  LAEGYEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIW-ANVHI 112
           LAEGY  MT E AV  W  EK +YDY +N+CV D   CLHYTQ+  +W  +VH+
Sbjct: 85  LAEGYGSMTGEEAVKFWVTEKPNYDYRTNSCVGD--ECLHYTQV--VWRKSVHL 134

[Close]

BLAST of Lsi03G006170 vs. NCBI nr
Match: gi|1009150276|ref|XP_015892934.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Ziziphus jujuba])

HSP 1 Score: 133.3 bits (334), Expect = 2.7e-28
Identity = 64/110 (58.18%), Postives = 80/110 (72.73%), Query Frame = 1


Query: 3   KSYPKNYVAAHNAIRSQVGVEPLHWNTTLAVYAQNYANTKIATCQMEHSRGPYGENLAEG 62
           K+  +++V AHNA R+QVGV P+ WN T+A YAQNYAN KI  C+MEHS GPYGENLAEG
Sbjct: 30  KNPNQDFVRAHNAARAQVGVGPITWNWTVAAYAQNYANQKINNCEMEHSGGPYGENLAEG 89

Query: 63  YEVMTAETAVSLWADEKKHYDYNSNACVNDSSHCLHYTQLATIW-ANVHI 112
           Y  MT E AV  W  EK +Y+Y +N+CV D   CLHYTQ+  +W  +VH+
Sbjct: 90  YGSMTGEEAVKFWVTEKPYYNYRTNSCVGD--ECLHYTQV--VWRKSVHL 135

The following BLAST results are available for this feature:

BLAST of Lsi03G006170 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	8.8e-27	53.27	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR1A_TOBAC	1.2e-23	50.00	Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1	[more]
PR1A_SOLLC	5.9e-23	50.48	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1	[more]
PR1B_TOBAC	7.7e-23	48.15	Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1	[more]
PRB1_ARATH	3.8e-22	46.73	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1	[more]

BLAST of Lsi03G006170 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7N5_CUCSA	3.5e-46	82.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070232 PE=3 SV=1	[more]
B9S7U6_RICCO	1.9e-28	50.89	Protein PRY2, putative OS=Ricinus communis GN=RCOM_1381800 PE=3 SV=1	[more]
A0A0A0K4C1_CUCSA	4.3e-28	57.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070225 PE=3 SV=1	[more]
A0A067K0X2_JATCU	1.2e-27	53.27	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22976 PE=4 SV=1	[more]
E2GEW7_9ROSI	4.7e-27	56.07	Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1	[more]

BLAST of Lsi03G006170 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33720.1	9.7e-24	46.73	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT3G19690.1	1.3e-23	43.12	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT1G50060.1	1.7e-23	49.06	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14580.1	2.2e-23	46.73	basic pathogenesis-related protein 1	[more]
AT2G19990.1	3.7e-23	47.52	pathogenesis-related protein-1-like	[more]

BLAST of Lsi03G006170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110139\|ref\|XP_008455069.1\|	1.5e-47	83.33	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|778724756\|ref\|XP_004137080.2\|	5.0e-46	82.41	PREDICTED: pathogenesis-related protein 1A-like [Cucumis sativus]	[more]
gi\|255562108\|ref\|XP_002522062.1\|	2.7e-28	50.89	PREDICTED: basic form of pathogenesis-related protein 1 [Ricinus communis]	[more]
gi\|1009150282\|ref\|XP_015892937.1\|	2.7e-28	57.02	PREDICTED: basic form of pathogenesis-related protein 1-like [Ziziphus jujuba]	[more]
gi\|1009150276\|ref\|XP_015892934.1\|	2.7e-28	58.18	PREDICTED: basic form of pathogenesis-related protein 1-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014044	CAP_domain
IPR001283	Allrgn_V5/Tpx1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G006170.1	Lsi03G006170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 6..108 score: 1.2
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 4..107 score: 1.5
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 11..103 score: 2.0
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 4..113 score: 2.2
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 3..103 score: 2.09
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 6..108 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi03G006170	Bhi05G000850	Wax gourd	lsiwgoB320
Lsi03G006170	CsaV3_7G007620	Cucumber (Chinese Long) v3	cuclsiB555

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G006170	Bottle gourd (USVL1VR-Ls)	lsilsiB126
Lsi03G006170	Cucumber (Gy14) v1	cgylsiB367
Lsi03G006170	Cucurbita maxima (Rimu)	cmalsiB116
Lsi03G006170	Cucurbita maxima (Rimu)	cmalsiB484
Lsi03G006170	Cucurbita maxima (Rimu)	cmalsiB662
Lsi03G006170	Cucurbita moschata (Rifu)	cmolsiB103
Lsi03G006170	Cucurbita moschata (Rifu)	cmolsiB468
Lsi03G006170	Cucurbita moschata (Rifu)	cmolsiB650
Lsi03G006170	Cucurbita pepo (Zucchini)	cpelsiB208
Lsi03G006170	Cucurbita pepo (Zucchini)	cpelsiB543
Lsi03G006170	Wild cucumber (PI 183967)	cpilsiB536
Lsi03G006170	Cucumber (Chinese Long) v2	culsiB522
Lsi03G006170	Melon (DHL92) v3.5.1	lsimeB247
Lsi03G006170	Melon (DHL92) v3.5.1	lsimeB268
Lsi03G006170	Watermelon (Charleston Gray)	lsiwcgB223
Lsi03G006170	Watermelon (Charleston Gray)	lsiwcgB233
Lsi03G006170	Watermelon (97103) v1	lsiwmB245
Lsi03G006170	Watermelon (97103) v1	lsiwmB268
Lsi03G006170	Melon (DHL92) v3.6.1	lsimedB260
Lsi03G006170	Melon (DHL92) v3.6.1	lsimedB281
Lsi03G006170	Watermelon (97103) v2	lsiwmbB226
Lsi03G006170	Wax gourd	lsiwgoB307
Lsi03G006170	Wax gourd	lsiwgoB319