Lsi03G006120 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G006120
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Location	chr03 : 7670147 .. 7670383 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAAATCATCTTATGCTCAAAACTCAGCTCAAGACTACATCAATCGCCACAACTCAGCAAGATCAATAGTGGGTGTTGGAAATATTGTATGGAACACAACTCTTGCGGCCTATGCTCAAACATATGCCAACTCAAGGAAAGCTGATTGCCAATTGGTGCATTCCAATGGGCCTTATGGAGAGAACCTTGCAAAGGGCAACAATATAATGGATTCACTGGCACAGCTGCAGTGA

mRNA sequence

ATGGTTAAATCATCTTATGCTCAAAACTCAGCTCAAGACTACATCAATCGCCACAACTCAGCAAGATCAATAGTGGGTGTTGGAAATATTGTATGGAACACAACTCTTGCGGCCTATGCTCAAACATATGCCAACTCAAGGAAAGCTGATTGCCAATTGGTGCATTCCAATGGGCCTTATGGAGAGAACCTTGCAAAGGGCAACAATATAATGGATTCACTGGCACAGCTGCAGTGA

Coding sequence (CDS)

ATGGTTAAATCATCTTATGCTCAAAACTCAGCTCAAGACTACATCAATCGCCACAACTCAGCAAGATCAATAGTGGGTGTTGGAAATATTGTATGGAACACAACTCTTGCGGCCTATGCTCAAACATATGCCAACTCAAGGAAAGCTGATTGCCAATTGGTGCATTCCAATGGGCCTTATGGAGAGAACCTTGCAAAGGGCAACAATATAATGGATTCACTGGCACAGCTGCAGTGA

Protein sequence

MVKSSYAQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPYGENLAKGNNIMDSLAQLQ

Homology

[Close]

BLAST of Lsi03G006120 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.1e-17
Identity = 41/65 (63.08%), Postives = 50/65 (76.92%), Query Frame = 1


Query: 1  MVKSSYAQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPY 60
          ++ SS AQNS QDY+N HN+AR  VGVG + W+  LAAYAQ YAN R  DC ++HS+GPY
Sbjct: 17 LIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGPY 76

Query: 61 GENLA 66
          GENLA
Sbjct: 77 GENLA 81

[Close]

BLAST of Lsi03G006120 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.9e-17
Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 1


Query: 7  AQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPYGENLAK 66
          AQ+S QDY+N HN ARS +GVG + W+  LAAYA+ YAN  K DC+LVHS GPYGENLAK
Sbjct: 26 AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 67 GNNIMDSLA 76
              +  +A
Sbjct: 86 SGGDLSGVA 94

[Close]

BLAST of Lsi03G006120 vs. Swiss-Prot
Match: PR12_HORVU (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 9.7e-17
Identity = 41/68 (60.29%), Postives = 50/68 (73.53%), Query Frame = 1


Query: 1  MVKSSYAQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPY 60
          MV  S AQNS QDY++ HN+ARS VGVG + W+T L A+AQ YAN R  DC+L HS GPY
Sbjct: 18 MVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPY 77

Query: 61 GENLAKGN 69
          GEN+  G+
Sbjct: 78 GENIFWGS 85

[Close]

BLAST of Lsi03G006120 vs. Swiss-Prot
Match: PR1_HORVU (Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 9.7e-17
Identity = 41/68 (60.29%), Postives = 50/68 (73.53%), Query Frame = 1


Query: 1  MVKSSYAQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPY 60
          MV  S AQNS QDY++ HN+ARS VGVG + W+T L A+AQ YAN R  DC+L HS GPY
Sbjct: 18 MVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPY 77

Query: 61 GENLAKGN 69
          GEN+  G+
Sbjct: 78 GENIFWGS 85

[Close]

BLAST of Lsi03G006120 vs. Swiss-Prot
Match: PR13_HORVU (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.2e-16
Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = 1


Query: 1  MVKSSYAQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPY 60
          MV  S AQNS QDY++ HN+AR+ VGVG + W+T L A+AQ YAN R  DC+L HS GPY
Sbjct: 18 MVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPY 77

Query: 61 GENLAKGN 69
          GEN+  G+
Sbjct: 78 GENIFWGS 85

[Close]

BLAST of Lsi03G006120 vs. TrEMBL
Match: A0A0A0K2D0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070252 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.1e-26
Identity = 59/69 (85.51%), Postives = 64/69 (92.75%), Query Frame = 1


Query: 1  MVKSSYAQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPY 60
          ++K   AQNSAQDYIN HNSARS VGVGNIVWNTTLAAYAQTYANSRK+DCQL+HSNGPY
Sbjct: 21 VLKRCEAQNSAQDYINGHNSARSTVGVGNIVWNTTLAAYAQTYANSRKSDCQLIHSNGPY 80

Query: 61 GENLAKGNN 70
          GEN+AKGNN
Sbjct: 81 GENIAKGNN 89

[Close]

BLAST of Lsi03G006120 vs. TrEMBL
Match: V4KGY0_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10011955mg PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 5.0e-20
Identity = 47/69 (68.12%), Postives = 60/69 (86.96%), Query Frame = 1


Query: 1  MVKSSYAQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPY 60
          +V +S AQN+AQDY+N HN+ARS VGV N+VW+ T+A YAQ YAN+RK+DC LVHS+GPY
Sbjct: 17 LVIASNAQNTAQDYLNTHNTARSQVGVANVVWDATVATYAQNYANARKSDCNLVHSSGPY 76

Query: 61 GENLAKGNN 70
          GENLAKG++
Sbjct: 77 GENLAKGSS 85

[Close]

BLAST of Lsi03G006120 vs. TrEMBL
Match: A0A087H1E9_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA4G059500 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.1e-19
Identity = 47/63 (74.60%), Postives = 55/63 (87.30%), Query Frame = 1


Query: 7  AQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPYGENLAK 66
          AQN+ QDY+N HN+ARS+VGV N+VW+  LA YA TYANSRKADC LVHSNGPYGENLAK
Sbjct: 23 AQNTIQDYLNTHNNARSLVGVPNLVWDAALANYALTYANSRKADCNLVHSNGPYGENLAK 82

Query: 67 GNN 70
          G++
Sbjct: 83 GSS 85

[Close]

BLAST of Lsi03G006120 vs. TrEMBL
Match: Q9LPM7_ARATH (F2J10.6 protein OS=Arabidopsis thaliana GN=F2J10.6 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.9e-19
Identity = 47/69 (68.12%), Postives = 59/69 (85.51%), Query Frame = 1


Query: 1  MVKSSYAQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPY 60
          +V ++ AQN+ QDY+N HN+AR+ VGV N+VW+TTLAAYA  Y+N RKADC LVHSNGPY
Sbjct: 17 LVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGPY 76

Query: 61 GENLAKGNN 70
          GENLAKG++
Sbjct: 77 GENLAKGSS 85

[Close]

BLAST of Lsi03G006120 vs. TrEMBL
Match: V4RNM8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029873mg PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.9e-19
Identity = 47/75 (62.67%), Postives = 59/75 (78.67%), Query Frame = 1


Query: 1  MVKSSYAQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPY 60
          ++++S+AQNS QDY++ HNSAR+ V V NI+WN T+AAYAQ Y+NSR ADC LVHS GPY
Sbjct: 21 LIQTSHAQNSPQDYLDAHNSARAAVYVPNIIWNDTVAAYAQNYSNSRIADCNLVHSGGPY 80

Query: 61 GENLAKGNNIMDSLA 76
          GENLAKG+      A
Sbjct: 81 GENLAKGSGTFTGTA 95

[Close]

BLAST of Lsi03G006120 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 102.8 bits (255), Expect = 9.6e-23
Identity = 47/69 (68.12%), Postives = 59/69 (85.51%), Query Frame = 1


Query: 1  MVKSSYAQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPY 60
          +V ++ AQN+ QDY+N HN+AR+ VGV N+VW+TTLAAYA  Y+N RKADC LVHSNGPY
Sbjct: 17 LVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGPY 76

Query: 61 GENLAKGNN 70
          GENLAKG++
Sbjct: 77 GENLAKGSS 85

[Close]

BLAST of Lsi03G006120 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 89.4 bits (220), Expect = 1.1e-18
Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 1


Query: 7  AQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPYGENLAK 66
          AQ+S QDY+N HN ARS +GVG + W+  LAAYA+ YAN  K DC+LVHS GPYGENLAK
Sbjct: 26 AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 67 GNNIMDSLA 76
              +  +A
Sbjct: 86 SGGDLSGVA 94

[Close]

BLAST of Lsi03G006120 vs. TAIR10
Match: AT1G50050.1 (AT1G50050.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 89.0 bits (219), Expect = 1.4e-18
Identity = 42/72 (58.33%), Postives = 54/72 (75.00%), Query Frame = 1


Query: 1  MVKSSYAQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHS-NGP 60
          +V ++ AQN+ QDY+N HN+AR+ VGV N+VW+T +AAYA  YAN+RK DC L  S  G 
Sbjct: 17 LVLATNAQNAQQDYLNTHNTARAQVGVANVVWDTVVAAYATNYANARKVDCSLTPSTGGS 76

Query: 61 YGENLAKGNNIM 72
          YGENLA GNN +
Sbjct: 77 YGENLANGNNAL 88

[Close]

BLAST of Lsi03G006120 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 79.7 bits (195), Expect = 8.7e-16
Identity = 36/75 (48.00%), Postives = 52/75 (69.33%), Query Frame = 1


Query: 1  MVKSSYAQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPY 60
          +V  S AQ+S QDY+  HN AR  VGVG + W+  +AAYA++YA   + +C+L+HS GPY
Sbjct: 20 LVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPY 79

Query: 61 GENLAKGNNIMDSLA 76
          GENLA G+  +  ++
Sbjct: 80 GENLAWGSGDLSGVS 94

[Close]

BLAST of Lsi03G006120 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 75.5 bits (184), Expect = 1.6e-14
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 1


Query: 7  AQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPYGENLAK 66
          AQ+S QD++  HN AR+ VGVG + W+  +AAYA+ YAN RK DC + HS+G YGEN+A 
Sbjct: 26 AQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSSGSYGENIAW 85

Query: 67 GNNIMDSLA 76
           +  M  +A
Sbjct: 86 SSGSMTGVA 94

[Close]

BLAST of Lsi03G006120 vs. NCBI nr
Match: gi|778724764|ref|XP_004136923.2| (PREDICTED: pathogenesis-related leaf protein 6-like [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 3.0e-26
Identity = 59/69 (85.51%), Postives = 64/69 (92.75%), Query Frame = 1


Query: 1  MVKSSYAQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPY 60
          ++K   AQNSAQDYIN HNSARS VGVGNIVWNTTLAAYAQTYANSRK+DCQL+HSNGPY
Sbjct: 21 VLKRCEAQNSAQDYINGHNSARSTVGVGNIVWNTTLAAYAQTYANSRKSDCQLIHSNGPY 80

Query: 61 GENLAKGNN 70
          GEN+AKGNN
Sbjct: 81 GENIAKGNN 89

[Close]

BLAST of Lsi03G006120 vs. NCBI nr
Match: gi|659110131|ref|XP_008455065.1| (PREDICTED: pathogenesis-related leaf protein 6-like [Cucumis melo])

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-24
Identity = 57/63 (90.48%), Postives = 58/63 (92.06%), Query Frame = 1


Query: 7  AQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPYGENLAK 66
          AQNSAQDYIN HNSARS V VGNIVWN TLAAYAQTYANSRK DCQL+HSNGPYGENLAK
Sbjct: 27 AQNSAQDYINGHNSARSTVKVGNIVWNATLAAYAQTYANSRKGDCQLIHSNGPYGENLAK 86

Query: 67 GNN 70
          GNN
Sbjct: 87 GNN 89

[Close]

BLAST of Lsi03G006120 vs. NCBI nr
Match: gi|567133267|ref|XP_006393183.1| (hypothetical protein EUTSA_v10011955mg [Eutrema salsugineum])

HSP 1 Score: 104.8 bits (260), Expect = 7.2e-20
Identity = 47/69 (68.12%), Postives = 60/69 (86.96%), Query Frame = 1


Query: 1  MVKSSYAQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPY 60
          +V +S AQN+AQDY+N HN+ARS VGV N+VW+ T+A YAQ YAN+RK+DC LVHS+GPY
Sbjct: 17 LVIASNAQNTAQDYLNTHNTARSQVGVANVVWDATVATYAQNYANARKSDCNLVHSSGPY 76

Query: 61 GENLAKGNN 70
          GENLAKG++
Sbjct: 77 GENLAKGSS 85

[Close]

BLAST of Lsi03G006120 vs. NCBI nr
Match: gi|470106702|ref|XP_004289701.1| (PREDICTED: pathogenesis-related protein 1B-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 104.4 bits (259), Expect = 9.3e-20
Identity = 48/68 (70.59%), Postives = 58/68 (85.29%), Query Frame = 1


Query: 2  VKSSYAQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPYG 61
          V  S+AQNS QDY+N HN+AR+ VGV NI+W++T+AAYAQ YANSR ADC LVHS GPYG
Sbjct: 16 VHPSHAQNSQQDYLNAHNTARAHVGVANIIWDSTVAAYAQNYANSRIADCNLVHSGGPYG 75

Query: 62 ENLAKGNN 70
          ENLAKG++
Sbjct: 76 ENLAKGSS 83

[Close]

BLAST of Lsi03G006120 vs. NCBI nr
Match: gi|674243186|gb|KFK35951.1| (hypothetical protein AALP_AA4G059500 [Arabis alpina])

HSP 1 Score: 103.6 bits (257), Expect = 1.6e-19
Identity = 47/63 (74.60%), Postives = 55/63 (87.30%), Query Frame = 1


Query: 7  AQNSAQDYINRHNSARSIVGVGNIVWNTTLAAYAQTYANSRKADCQLVHSNGPYGENLAK 66
          AQN+ QDY+N HN+ARS+VGV N+VW+  LA YA TYANSRKADC LVHSNGPYGENLAK
Sbjct: 23 AQNTIQDYLNTHNNARSLVGVPNLVWDAALANYALTYANSRKADCNLVHSNGPYGENLAK 82

Query: 67 GNN 70
          G++
Sbjct: 83 GSS 85

The following BLAST results are available for this feature:

BLAST of Lsi03G006120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	1.1e-17	63.08	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PRB1_ARATH	1.9e-17	59.42	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1	[more]
PR12_HORVU	9.7e-17	60.29	Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1	[more]
PR1_HORVU	9.7e-17	60.29	Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1	[more]
PR13_HORVU	2.2e-16	58.82	Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1	[more]

BLAST of Lsi03G006120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2D0_CUCSA	2.1e-26	85.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070252 PE=3 SV=1	[more]
V4KGY0_EUTSA	5.0e-20	68.12	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10011955mg PE=3 SV=1	[more]
A0A087H1E9_ARAAL	1.1e-19	74.60	Uncharacterized protein OS=Arabis alpina GN=AALP_AA4G059500 PE=3 SV=1	[more]
Q9LPM7_ARATH	1.9e-19	68.12	F2J10.6 protein OS=Arabidopsis thaliana GN=F2J10.6 PE=3 SV=1	[more]
V4RNM8_9ROSI	1.9e-19	62.67	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029873mg PE=3 SV=1	[more]

BLAST of Lsi03G006120 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50060.1	9.6e-23	68.12	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14580.1	1.1e-18	59.42	basic pathogenesis-related protein 1	[more]
AT1G50050.1	1.4e-18	58.33	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14610.1	8.7e-16	48.00	pathogenesis-related gene 1	[more]
AT4G33720.1	1.6e-14	50.72	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]

BLAST of Lsi03G006120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778724764\|ref\|XP_004136923.2\|	3.0e-26	85.51	PREDICTED: pathogenesis-related leaf protein 6-like [Cucumis sativus]	[more]
gi\|659110131\|ref\|XP_008455065.1\|	1.3e-24	90.48	PREDICTED: pathogenesis-related leaf protein 6-like [Cucumis melo]	[more]
gi\|567133267\|ref\|XP_006393183.1\|	7.2e-20	68.12	hypothetical protein EUTSA_v10011955mg [Eutrema salsugineum]	[more]
gi\|470106702\|ref\|XP_004289701.1\|	9.3e-20	70.59	PREDICTED: pathogenesis-related protein 1B-like [Fragaria vesca subsp. vesca]	[more]
gi\|674243186\|gb\|KFK35951.1\|	1.6e-19	74.60	hypothetical protein AALP_AA4G059500 [Arabis alpina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014044	CAP_domain
IPR001283	Allrgn_V5/Tpx1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G006120.1	Lsi03G006120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 1..69 score: 2.6
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 7..68 score: 8.2
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 9..72 score: 4.
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 8..69 score: 5.76
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 1..69 score: 2.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi03G006120	MELO3C018539.2	Melon (DHL92) v3.6.1	lsimedB260
Lsi03G006120	Cp4.1LG15g04130	Cucurbita pepo (Zucchini)	cpelsiB208

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G006120	Wax gourd	lsiwgoB307
Lsi03G006120	Wax gourd	lsiwgoB319
Lsi03G006120	Wax gourd	lsiwgoB320
Lsi03G006120	Bottle gourd (USVL1VR-Ls)	lsilsiB126
Lsi03G006120	Cucumber (Gy14) v1	cgylsiB367
Lsi03G006120	Cucurbita maxima (Rimu)	cmalsiB116
Lsi03G006120	Cucurbita maxima (Rimu)	cmalsiB484
Lsi03G006120	Cucurbita maxima (Rimu)	cmalsiB662
Lsi03G006120	Cucurbita moschata (Rifu)	cmolsiB103
Lsi03G006120	Cucurbita moschata (Rifu)	cmolsiB468
Lsi03G006120	Cucurbita moschata (Rifu)	cmolsiB650
Lsi03G006120	Cucurbita pepo (Zucchini)	cpelsiB543
Lsi03G006120	Wild cucumber (PI 183967)	cpilsiB536
Lsi03G006120	Cucumber (Chinese Long) v2	culsiB522
Lsi03G006120	Melon (DHL92) v3.5.1	lsimeB247
Lsi03G006120	Melon (DHL92) v3.5.1	lsimeB268
Lsi03G006120	Watermelon (Charleston Gray)	lsiwcgB223
Lsi03G006120	Watermelon (Charleston Gray)	lsiwcgB233
Lsi03G006120	Watermelon (97103) v1	lsiwmB245
Lsi03G006120	Watermelon (97103) v1	lsiwmB268
Lsi03G006120	Melon (DHL92) v3.6.1	lsimedB281
Lsi03G006120	Cucumber (Chinese Long) v3	cuclsiB555
Lsi03G006120	Watermelon (97103) v2	lsiwmbB226