Lsi03G006110 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi03G006110
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPolygalacturonase
Locationchr03 : 7660253 .. 7661849 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTATGATTAAATCGAGCTTCTTAGTTACTACATTCTTGATGTCGTTATTATCATTTACAGTTGAGACTCGATCTCATGTTGACGTTATTTTTCCTTTGAGGAAGTATGGTGACATTGTGCCTGGTGGTGATATCACAGAGGTAAACCCACAATAAAATGGATGCCAAAGTGATTACTCATGAATTGATCAATTGTGTTTGTTAATTTTTGTTACTTGTGAAACATAGGCTTTGAAAGATGCATGGAATGATGCATGTGCATCTGTTCGTCCGAGTGCGGTGGTCATTCCGAAAGGGATATTTAAAGTAAGTAAAGGAACATTCAAAGGCCCATGCAAGAGCCCTATTGAAATTCGATTTCGAGGAACATTGCAAGCTCCAAAACACCCACATGGAGATAGTTGGATTACTTTTGCATATGTTGATAGATTGACGCTATCAGGTGGAGGAATTTTTGATGGCCAAGGAAGGGCAGGTTGGGAAAAGAATGATTGCCATAAAAACATAAATTGTGCTGACCTCCCTATTGTAAGTTATATACCTTGTATTGTTTCCCTTTCCAATCTCATTCATCTTTACAATTTGGTAGATACTTTATGATAATTTTTAAGGAATTAAGTTTTGAAATAAATTTTAACTATTAGTTAAATTAGGCAGGAGAGCTAAATTTTCAAAATATAAAGATTATATATAGAGAGAGAAAATTAATGATTTTTGTTCCTCCATGTAAAACTTTGTGGCTTCACCCTTGCTCTACATGACATATTGATCATATAAAAAATGAGCAGAGTTTAAGGTTCGACTTCATTACTAATTCAATTGTGAAGAGAACAACATCACTCGATAGCAAGAACTTCCATGTCAACATCCTAAGATGCAACAACCTCACATTCCATGGTGTCAACATAATTGCACCAGAAAATAGTCCCAACACAGATGGAATACACATTGGTCGATCCATTGGGATCTCAATTACAAAGTCTCAGATCGCAACAGGAGATGATTGCATCTCCCTTGGAGATGGAAGCAAACGAGTAAAAGTCACCAACGTGACATGCGGGCCTGGACATGGAATAAGCATAGGAAGTCTTGGAAAATACACTAATGAAGAACCCGTTGAAGGTATCATAGTAAAAAACTGCACCATAATGAACACCACTAACGGTGTTAGGATCAAAACATGGCCAGCCTCTCCCGTTGCCGGCACTGCTACCAACATGCATTTTTCAGACATTATAATGGCCAATGTTAGCAACCCAATTGTCATAGACCAAGAGTACTGCCCATGGAATCAATGCAATCGTAAGGTATTGATCATTCTCAAAACTTTCATTTTGAAATTTTTCATGTCAACTTCACAAATAAACTTTTCATTTTAATTTTTTAGGTTCCGTCAAAGATTAAGATTAGTAAAGTGAGCTTCAAGAATATTAGAGGAAGTTCTGCAACTCCAGTGGCGGTCAAACTTATTTGCAGCAGTAACCTGCCATGTGACGAAGTGAAAGTAGCCAACATTGACCTCATTTATAATGGAAAAGAAGGTCTCATTACATCTCAATGTATGAATGTAAGACCCAGCATTTCGGGAATCTAA

mRNA sequence

ATGGTTGAGACTCGATCTCATGTTGACGTTATTTTTCCTTTGAGGAAGTATGGTGACATTGTGCCTGGTGGTGATATCACAGAGGCTTTGAAAGATGCATGGAATGATGCATGTGCATCTGTTCGTCCGAGTGCGGTGGTCATTCCGAAAGGGATATTTAAAGTAAGTAAAGGAACATTCAAAGGCCCATGCAAGAGCCCTATTGAAATTCGATTTCGAGGAACATTGCAAGCTCCAAAACACCCACATGGAGATAGTTGGATTACTTTTGCATATGTTGATAGATTGACGCTATCAGGTGGAGGAATTTTTGATGGCCAAGGAAGGGCAGGTTGGGAAAAGAATGATTGCCATAAAAACATAAATTGTGCTGACCTCCCTATTAGTTTAAGGTTCGACTTCATTACTAATTCAATTGTGAAGAGAACAACATCACTCGATAGCAAGAACTTCCATGTCAACATCCTAAGATGCAACAACCTCACATTCCATGGTGTCAACATAATTGCACCAGAAAATAGTCCCAACACAGATGGAATACACATTGGTCGATCCATTGGGATCTCAATTACAAAGTCTCAGATCGCAACAGGAGATGATTGCATCTCCCTTGGAGATGGAAGCAAACGAGTAAAAGTCACCAACGTGACATGCGGGCCTGGACATGGAATAAGCATAGGAAGTCTTGGAAAATACACTAATGAAGAACCCGTTGAAGGTATCATAGTAAAAAACTGCACCATAATGAACACCACTAACGGTGTTAGGATCAAAACATGGCCAGCCTCTCCCGTTGCCGGCACTGCTACCAACATGCATTTTTCAGACATTATAATGGCCAATGTTAGCAACCCAATTGTCATAGACCAAGAGTACTGCCCATGGAATCAATGCAATCGTAAGGTTCCGTCAAAGATTAAGATTAGTAAAGTGAGCTTCAAGAATATTAGAGGAAGTTCTGCAACTCCAGTGGCGGTCAAACTTATTTGCAGCAGTAACCTGCCATGTGACGAAGTGAAAGTAGCCAACATTGACCTCATTTATAATGGAAAAGAAGGTCTCATTACATCTCAATGTATGAATGTAAGACCCAGCATTTCGGGAATCTAA

Coding sequence (CDS)

ATGGTTGAGACTCGATCTCATGTTGACGTTATTTTTCCTTTGAGGAAGTATGGTGACATTGTGCCTGGTGGTGATATCACAGAGGCTTTGAAAGATGCATGGAATGATGCATGTGCATCTGTTCGTCCGAGTGCGGTGGTCATTCCGAAAGGGATATTTAAAGTAAGTAAAGGAACATTCAAAGGCCCATGCAAGAGCCCTATTGAAATTCGATTTCGAGGAACATTGCAAGCTCCAAAACACCCACATGGAGATAGTTGGATTACTTTTGCATATGTTGATAGATTGACGCTATCAGGTGGAGGAATTTTTGATGGCCAAGGAAGGGCAGGTTGGGAAAAGAATGATTGCCATAAAAACATAAATTGTGCTGACCTCCCTATTAGTTTAAGGTTCGACTTCATTACTAATTCAATTGTGAAGAGAACAACATCACTCGATAGCAAGAACTTCCATGTCAACATCCTAAGATGCAACAACCTCACATTCCATGGTGTCAACATAATTGCACCAGAAAATAGTCCCAACACAGATGGAATACACATTGGTCGATCCATTGGGATCTCAATTACAAAGTCTCAGATCGCAACAGGAGATGATTGCATCTCCCTTGGAGATGGAAGCAAACGAGTAAAAGTCACCAACGTGACATGCGGGCCTGGACATGGAATAAGCATAGGAAGTCTTGGAAAATACACTAATGAAGAACCCGTTGAAGGTATCATAGTAAAAAACTGCACCATAATGAACACCACTAACGGTGTTAGGATCAAAACATGGCCAGCCTCTCCCGTTGCCGGCACTGCTACCAACATGCATTTTTCAGACATTATAATGGCCAATGTTAGCAACCCAATTGTCATAGACCAAGAGTACTGCCCATGGAATCAATGCAATCGTAAGGTTCCGTCAAAGATTAAGATTAGTAAAGTGAGCTTCAAGAATATTAGAGGAAGTTCTGCAACTCCAGTGGCGGTCAAACTTATTTGCAGCAGTAACCTGCCATGTGACGAAGTGAAAGTAGCCAACATTGACCTCATTTATAATGGAAAAGAAGGTCTCATTACATCTCAATGTATGAATGTAAGACCCAGCATTTCGGGAATCTAA

Protein sequence

MVETRSHVDVIFPLRKYGDIVPGGDITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFKGPCKSPIEIRFRGTLQAPKHPHGDSWITFAYVDRLTLSGGGIFDGQGRAGWEKNDCHKNINCADLPISLRFDFITNSIVKRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSQIATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGIIVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGSSATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMNVRPSISGI
BLAST of Lsi03G006110 vs. Swiss-Prot
Match: PGLR_OENOR (Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 1.0e-116
Identity = 200/348 (57.47%), Postives = 254/348 (72.99%), Query Frame = 1

Query: 25  DITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFKGPCKSPIEIRFRGTLQAPKHPH- 84
           D T+AL  AW +ACAS  PS +++PKG F V   T +GPCKS I ++ +GTL+AP  P  
Sbjct: 1   DSTQALTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSK 60

Query: 85  --GDSWITFAYVDRLTLSGGGIFDGQGRAGWEKNDCHKNIN-CADLPISLRFDFITNSIV 144
             G  WI    +D LT+ GGG+FDGQG++ W +NDCHKN   C  L ++LR   +TNSI+
Sbjct: 61  IKGLGWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSIL 120

Query: 145 KRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSQIATGDD 204
           +  T+LDSKNFHVN++ C NLTF    I A E S NTDGIHIGRS G++I  ++I TGDD
Sbjct: 121 RDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDD 180

Query: 205 CISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGIIVKNCTIMNTTNGVRIKTW 264
           CISLGDGSK + +TN+TCGPGHGIS+GSLG+Y NEE V GI VKNCTI  + NGVRIKTW
Sbjct: 181 CISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTW 240

Query: 265 PASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGSS 324
           P S   G A+ MHF DI M +V  PI+IDQ YCP+NQC  +VPS +K+SK+SFKNI+G+S
Sbjct: 241 PKSE-PGEASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTS 300

Query: 325 ATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMNVRPSISG 369
            T  AVKL+CS + PC+ V++A+IDL Y+GK G  TS C N++P+I G
Sbjct: 301 TTKEAVKLVCSKSFPCNGVELADIDLTYSGKGGPATSVCENIKPTIKG 347

BLAST of Lsi03G006110 vs. Swiss-Prot
Match: PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 5.6e-115
Identity = 194/364 (53.30%), Postives = 257/364 (70.60%), Query Frame = 1

Query: 9   DVIFPLRKYGDIVPGG-DITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFKGPCKSP 68
           D    + K+G    G  D+++   DAW +ACASV PS VVIPKG + +SK   +GPCK+P
Sbjct: 27  DAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAP 86

Query: 69  IEIRFRGTLQAPKHPHG---DSWITFAYVDRLTLSGGGIFDGQGRAGWEKNDCHKNINCA 128
           IEI  +GT+QAP  P      +W+ F  V+   + GGGIFDGQG   +EKN C      +
Sbjct: 87  IEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRS 146

Query: 129 DLPISLRFDFITNSIVKRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIHIGR 188
            LP+++RFDF+TN++++  TS DSK FH+N+  C N+T   + I AP+ SPNTDGIH+G+
Sbjct: 147 KLPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGK 206

Query: 189 SIGISITKSQIATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGIIVK 248
           S G++I  S I TGDDCIS+GDG+K + +  +TCGPGHGISIGSLGK+ NEEPVEGI + 
Sbjct: 207 SEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKIS 266

Query: 249 NCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRKVPS 308
           NCTI NT+NG RIKTWP     G  + +HF DI M NVS+PI+IDQ+YCPWN+C +   S
Sbjct: 267 NCTITNTSNGARIKTWPGEH-GGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEES 326

Query: 309 KIKISKVSFKNIRGSSATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMNVRP 368
           K+K+S +SFKNIRG+SA P A+K ICS + PC  V++A+ID+ +NG E   TSQC+NV+P
Sbjct: 327 KVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIKHNGAEP-ATSQCLNVKP 386

BLAST of Lsi03G006110 vs. Swiss-Prot
Match: PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 2.1e-114
Identity = 193/364 (53.02%), Postives = 256/364 (70.33%), Query Frame = 1

Query: 9   DVIFPLRKYGDIVPGG-DITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFKGPCKSP 68
           D    + K+G    G  D+++   DAW +ACASV PS VVIPKG + +SK   +GPCK+P
Sbjct: 27  DAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAP 86

Query: 69  IEIRFRGTLQAPKHPHG---DSWITFAYVDRLTLSGGGIFDGQGRAGWEKNDCHKNINCA 128
           IEI  +GT+QAP  P      +W+ F  V+   + GGGIFDGQG   +EKN C      +
Sbjct: 87  IEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRS 146

Query: 129 DLPISLRFDFITNSIVKRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIHIGR 188
            LP+++RFDF+TN++++  TS DSK FH+N+  C N+T   + I AP+ SPNTDGIH+G+
Sbjct: 147 KLPVNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGK 206

Query: 189 SIGISITKSQIATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGIIVK 248
           S G++I  S I TGDDCIS+GDG+K + +  +TCGPGHGISIGSLGK+ NEEPVEGI + 
Sbjct: 207 SEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKIS 266

Query: 249 NCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRKVPS 308
           NCTI NT+NG RIKTWP     G  + +HF DI M NVS+PI+IDQ+YCPWN+C +   S
Sbjct: 267 NCTITNTSNGARIKTWPGEH-GGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEES 326

Query: 309 KIKISKVSFKNIRGSSATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMNVRP 368
           K+K+S +SFKNIRG+SA P A+K ICS + PC  V++A+ID+ +NG E   TSQC+NV+P
Sbjct: 327 KVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIQHNGAEP-ATSQCLNVKP 386

BLAST of Lsi03G006110 vs. Swiss-Prot
Match: PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 1.1e-110
Identity = 189/361 (52.35%), Postives = 259/361 (71.75%), Query Frame = 1

Query: 11  IFPLRKYGDIVPGGDITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFKGPCKSPIEI 70
           +F + KYG      DI+EAL +A+ +AC S  PS +VIPKG F +++   +GPCKSP+E+
Sbjct: 26  VFDITKYG-ANSNADISEALLNAFKEACQSTSPSTIVIPKGTFTMNQVKLEGPCKSPLEL 85

Query: 71  RFRGTLQAPKHPHG---DSWITFAYVDRLTLSGGGIFDGQGRAGWEKNDCHKNINCADLP 130
           + + TL+AP  P       W+T   +D+ T+SGGGI DGQ  A WE   C ++  C  LP
Sbjct: 86  QIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGILDGQAAAAWE---CKQSKKCNKLP 145

Query: 131 ISLRFDFITNSIVKRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIHIGRSIG 190
            +L F+ +TNS +K  T+LDSK+FHVN+ +C NLTF   N+ AP NSPNTDGIH+ RS  
Sbjct: 146 NNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSS 205

Query: 191 ISITKSQIATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGIIVKNCT 250
           ++IT S  +TGDDCIS+GD ++++ +T VTCGPGHGIS+GSLG   +E+PV G+ V+NCT
Sbjct: 206 VNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNCT 265

Query: 251 IMNTTNGVRIKTWPASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRKVPSKIK 310
             NT NGVRIKTWPAS   G   ++HF DII+ NVSNP+VIDQ YCP+N+CN+ +PS++K
Sbjct: 266 FTNTDNGVRIKTWPASH-PGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQVK 325

Query: 311 ISKVSFKNIRGSSATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMNVRPSIS 369
           ISKVSF+NI+G+S T  AV L+ S  +PC+ ++V +ID+ Y+GKEG   S C N++PS+ 
Sbjct: 326 ISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSGKEGPAKSSCENIKPSLK 381

BLAST of Lsi03G006110 vs. Swiss-Prot
Match: PGLR_MEDSA (Polygalacturonase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 3.5e-109
Identity = 190/367 (51.77%), Postives = 255/367 (69.48%), Query Frame = 1

Query: 11  IFPLRKYGDIVPGGDITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFKGPCKSPIEI 70
           +  + K+G   P  DI +AL  AWN+ACAS   + +VIP G ++++    KGPCK+PIE+
Sbjct: 24  VLDISKFGG-KPNSDIGQALTSAWNEACASTTAAKIVIPAGTYQLNGIELKGPCKAPIEL 83

Query: 71  RFRGTLQAPKHPH----GDSWITFAYVDRLTLSGGGIFDGQGRAGWEKND-----CHKNI 130
           +  GT+QAP  P      + W  F Y+D LTLSG G+FDGQG   ++K         KN 
Sbjct: 84  QVDGTIQAPADPSVIKGTEQWFKFLYMDHLTLSGKGVFDGQGATVYKKAAPASAWSGKNS 143

Query: 131 NCADLPISLRFDFITNSIVKRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIH 190
           N + + ++  F+F+ NSIV+  TS DSKNFHV +  C N+TF G  I AP +SPNTDGIH
Sbjct: 144 N-SKVFMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIH 203

Query: 191 IGRSIGISITKSQIATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGI 250
           +G+S  + I  + I TGDDC+S+GDGSK++ V  V CGPGHG+S+GSLGK+T EE VEGI
Sbjct: 204 MGKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGI 263

Query: 251 IVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRK 310
            VKNCT+  T NGVRIKTWP +P   T +++HF DI M NV NP++IDQEY PWNQC++K
Sbjct: 264 TVKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYYPWNQCSKK 323

Query: 311 VPSKIKISKVSFKNIRGSSATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMN 369
            PSKIK+SK+SFKN++G+S T   V LICSS +PCD V++ N+DL +NG     T++C N
Sbjct: 324 NPSKIKLSKISFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFNGAP--TTAKCTN 383

BLAST of Lsi03G006110 vs. TrEMBL
Match: A0A0A0K3B7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037910 PE=3 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 1.2e-188
Identity = 316/368 (85.87%), Postives = 338/368 (91.85%), Query Frame = 1

Query: 2   VETRSHVDVIFPLRKYGDIVPGGDITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFK 61
           +E RSHVD IF LRKYG+IV G D+TEALKDAWNDACAS RPSAVVIPKG FKV +G FK
Sbjct: 23  IEARSHVD-IFSLRKYGNIVSGADVTEALKDAWNDACASDRPSAVVIPKGTFKVREGEFK 82

Query: 62  GPCKSPIEIRFRGTLQAPKHPHGDSWITFAYVDRLTLSGGGIFDGQGRAGWEKNDCHKNI 121
           GPCKSPIE R  GTLQAPKHPHGDSWITFAYVDR+ LSGGG+FDGQG+AGWEKNDCHK I
Sbjct: 83  GPCKSPIEFRVHGTLQAPKHPHGDSWITFAYVDRMRLSGGGVFDGQGKAGWEKNDCHKRI 142

Query: 122 NCADLPISLRFDFITNSIVKRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIH 181
           +CA LPISLRFDFITNSIV+R TSLDSKNFHVNIL CNNLTF GVNIIAPENSPNTDGIH
Sbjct: 143 DCAKLPISLRFDFITNSIVRRITSLDSKNFHVNILGCNNLTFQGVNIIAPENSPNTDGIH 202

Query: 182 IGRSIGISITKSQIATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGI 241
           IGRSIGISI KS+IATGDDCISLGDGSKR+KV NV CGPGHGISIGSLGKY NEEPVEG+
Sbjct: 203 IGRSIGISILKSRIATGDDCISLGDGSKRIKVNNVICGPGHGISIGSLGKYNNEEPVEGV 262

Query: 242 IVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRK 301
           IV NCTI+NTTNGVRIKTWPASPVAG ATNMHFSDI M NVSNPI+IDQEYCPWNQCNR+
Sbjct: 263 IVNNCTIINTTNGVRIKTWPASPVAGIATNMHFSDITMVNVSNPILIDQEYCPWNQCNRE 322

Query: 302 VPSKIKISKVSFKNIRGSSATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMN 361
           +PS IKI+KVSFKNIRGSSATPVAVKLICSSNLPC+EVKVANIDL+YNG +G ITS+CMN
Sbjct: 323 IPSNIKINKVSFKNIRGSSATPVAVKLICSSNLPCEEVKVANIDLVYNGIKGSITSECMN 382

Query: 362 VRPSISGI 370
           V+P ISGI
Sbjct: 383 VKPIISGI 389

BLAST of Lsi03G006110 vs. TrEMBL
Match: W9SC16_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020041 PE=3 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 1.5e-130
Identity = 222/364 (60.99%), Postives = 280/364 (76.92%), Query Frame = 1

Query: 10  VIFPLRKYGDIVPGGDITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFKGPCKSPIE 69
           V+F + + G I+P  DIT+AL  AWN+ACAS  PS VV+PKGIFK+S  T +GPC +PIE
Sbjct: 27  VLFDVTENGTILPQSDITDALLKAWNNACASTIPSKVVVPKGIFKLSGATLEGPCNAPIE 86

Query: 70  IRFRGTLQAPKHPH----GDSWITFAYVDRLTLSGGGIFDGQGRAGWEKNDCHKNINCAD 129
              +G LQAP        GD+W+ F YVD LT+SGGGIFDGQG+  W K DC  +  C D
Sbjct: 87  FDLQGILQAPPEDGNFTGGDTWVAFEYVDLLTISGGGIFDGQGKPTWGK-DCANDEYCGD 146

Query: 130 LPISLRFDFITNSIVKRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIHIGRS 189
           LPI++RF+++TNSI++  TSLDSK FH+N+L C N+TF  V IIA ENSP+TDGIHIGRS
Sbjct: 147 LPINIRFNYVTNSIIQEITSLDSKQFHINVLGCQNVTFQHVKIIAAENSPHTDGIHIGRS 206

Query: 190 IGISITKSQIATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGIIVKN 249
             I +  S I TGDDCISLGDGSK++ +  VTCGPGHGISIGSLGKY NEE V+G+ VK+
Sbjct: 207 TDIKVLDSNIQTGDDCISLGDGSKQITIAKVTCGPGHGISIGSLGKYLNEEAVKGVDVKS 266

Query: 250 CTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRKVPSK 309
           CT+ NT NGVRIKTWP S   G A+++HF DIIM NV NP++IDQEYCPWNQC  ++PS+
Sbjct: 267 CTLKNTQNGVRIKTWPDSQ-EGKASDLHFEDIIMENVGNPVMIDQEYCPWNQCVSQLPSR 326

Query: 310 IKISKVSFKNIRGSSATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMNVRPS 369
           ++IS V FKNIRG+S+T +AVKL+CS  LPC +V++ +IDL Y+G EG ITS+C NV+P+
Sbjct: 327 VQISGVRFKNIRGTSSTALAVKLVCSGGLPCQDVEMTDIDLKYSGDEGQITSECKNVKPT 386

BLAST of Lsi03G006110 vs. TrEMBL
Match: A0A147BN67_IXORI (Putative polygalacturonase/glycoside hydrolase family protein (Fragment) OS=Ixodes ricinus PE=3 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 2.1e-129
Identity = 215/359 (59.89%), Postives = 274/359 (76.32%), Query Frame = 1

Query: 11  IFPLRKYGDIVPGGDITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFKGPCKSPIEI 70
           +F ++ YG   P  DIT+AL +AW DACA++  S VV+P G +K+   + KGPCK PIE+
Sbjct: 2   VFDVKTYG-AKPNADITQALSNAWKDACAAIGSSKVVVPAGTYKLGLVSLKGPCKGPIEV 61

Query: 71  RFRGTLQAPKHPH----GDSWITFAYVDRLTLSGGGIFDGQGRAGWEKNDCHKNINCADL 130
           +  GTLQAP  P      D W+ F  +D+ TLSG G FDGQG+  W++NDC K  NC  L
Sbjct: 62  QVEGTLQAPVDPGYFKGSDGWVVFERIDQFTLSGSGSFDGQGQMAWKQNDCSKTFNCKTL 121

Query: 131 PISLRFDFITNSIVKRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIHIGRSI 190
            +++RF+FITNS+V+   SL+SKNFH+N+L C N TF  V I AP +SPNTDGIHIGRS 
Sbjct: 122 AVNIRFNFITNSLVRDIKSLNSKNFHINLLGCKNFTFQHVTITAPGDSPNTDGIHIGRSS 181

Query: 191 GISITKSQIATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGIIVKNC 250
           GI+IT + IATGDDCIS+GDGS+ V +  VTCGPGHGISIGSLGKYTNEEPV GI V  C
Sbjct: 182 GINITDTNIATGDDCISMGDGSQDVTINKVTCGPGHGISIGSLGKYTNEEPVSGIKVIGC 241

Query: 251 TIMNTTNGVRIKTWPASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRKVPSKI 310
           T+ +T NGVRIKTWP++P +G+AT+MHF DIIM NV+NPI+IDQ YCPWNQC  +VPSKI
Sbjct: 242 TLTDTANGVRIKTWPSNPTSGSATDMHFEDIIMNNVANPIIIDQVYCPWNQCKAQVPSKI 301

Query: 311 KISKVSFKNIRGSSATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMNVRPS 366
           K+S +SF+ IRG+S+T  AVKL+CSS +PC++V++A+IDL+Y G EG  TS C NV+P+
Sbjct: 302 KLSNMSFRGIRGTSSTREAVKLVCSSGIPCEKVELADIDLVYKGPEGPATSTCANVKPT 359

BLAST of Lsi03G006110 vs. TrEMBL
Match: E3VSV7_CUCPE (Polygalacturonase OS=Cucurbita pepo GN=PG1 PE=2 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 2.1e-129
Identity = 219/359 (61.00%), Postives = 275/359 (76.60%), Query Frame = 1

Query: 11  IFPLRKYGDIVPGGDITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFKGPCKSPIEI 70
           +F +  +G   P  D T+AL DAW +ACAS  PS V++PKG +++ +   KGPCKSPIE+
Sbjct: 39  VFDITTFG-AKPNADATQALADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIEL 98

Query: 71  RFRGTLQA-PKHPHGDSWITFAYVDRLTLSGGGIFDGQGRAGWEKNDCHKNINCADLPIS 130
              GTLQA P    GD  +   Y+D LTLSG G+FDGQG+AGWEKNDCH    C  LP++
Sbjct: 99  LVEGTLQASPTDTEGDGLLVMEYIDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMN 158

Query: 131 LRFDFITNSIVKRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIHIGRSIGIS 190
           L+F+FITNSIVK  TSLDSKNFH+N+L   NLTF  + I AP NSPNTDGIH+G S  + 
Sbjct: 159 LKFNFITNSIVKDITSLDSKNFHINVLAGKNLTFDHLKITAPHNSPNTDGIHLGDSEDVY 218

Query: 191 ITKSQIATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGIIVKNCTIM 250
           I  + IATGDDCIS+G  ++++ +++VTCGPGHGISIGSLGKY  E+ V G+ VK C ++
Sbjct: 219 ILNTAIATGDDCISVGYTNRKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLI 278

Query: 251 NTTNGVRIKTWPASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRKVPSKIKIS 310
            TTNGVRIK+WP S V+  A++MHF DI M NV+NPI+IDQEYCPWNQCNRKVPS IKIS
Sbjct: 279 GTTNGVRIKSWPDSAVSYPASDMHFEDIEMENVANPIIIDQEYCPWNQCNRKVPSAIKIS 338

Query: 311 KVSFKNIRGSSATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMNVRPSISG 369
           KVSFKNIRG+S+TPVAVKL+CS + PC+ V++A+IDL Y+GKEG   S+C NV+P+ISG
Sbjct: 339 KVSFKNIRGTSSTPVAVKLVCSKSNPCEGVEIADIDLTYSGKEGPAVSECSNVKPTISG 396

BLAST of Lsi03G006110 vs. TrEMBL
Match: Q9MBB9_SALGI (Polygalacturonase OS=Salix gilgiana GN=SgPG2 PE=2 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 3.6e-129
Identity = 220/362 (60.77%), Postives = 269/362 (74.31%), Query Frame = 1

Query: 11  IFPLRKYGDIVPGGDITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFKGPCKSPIEI 70
           +F + KYG      DITEAL +AW DACAS  PS V+IP G + + + T  GPCK+ IE+
Sbjct: 30  VFDVTKYGG---KEDITEALNNAWKDACASTNPSKVLIPSGTYSLRQVTLAGPCKAAIEL 89

Query: 71  RFRGTLQAPKHPH---GDSWITFAYVDRLTLSGGGIFDGQGRAGWEKNDCHKNINCADLP 130
           +  G L+AP +P    G  W+ F Y+D+LTLSG G FDGQG   W K+ C KN NC  LP
Sbjct: 90  QVNGILKAPVNPDQFSGSHWVNFRYIDQLTLSGSGTFDGQGNVAWSKSTCSKNKNCEGLP 149

Query: 131 ISLRFDFITNSIVKRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIHIGRSIG 190
           +++RFDFITN +V+  T+ DSKNFHVN+L C NLTF    + AP  S NTDGIHIGRS G
Sbjct: 150 MNIRFDFITNGLVRDITTRDSKNFHVNVLGCKNLTFQHFTVTAPAESINTDGIHIGRSTG 209

Query: 191 ISITKSQIATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGIIVKNCT 250
           I I  S+I TGDDCIS+GDG++ + VT VTCGPGHGIS+GSLG+Y NE+PV GI VKNCT
Sbjct: 210 IYIIDSKIGTGDDCISVGDGTEELHVTGVTCGPGHGISVGSLGRYPNEKPVSGIFVKNCT 269

Query: 251 IMNTTNGVRIKTWPASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRKVPSKIK 310
           I NT NGVRIK+WP     G A+NMHF DI+M NV NPI++DQ YCPWNQC+ K PSK+K
Sbjct: 270 ISNTANGVRIKSWP-DLYGGVASNMHFEDIVMNNVQNPILLDQVYCPWNQCSLKAPSKVK 329

Query: 311 ISKVSFKNIRGSSATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMNVRPSIS 370
           IS VSFKNIRG+SATPV VKL CSS +PC++V++ANI+L+Y+G EG   SQC NV+P IS
Sbjct: 330 ISDVSFKNIRGTSATPVVVKLACSSGIPCEKVELANINLLYSGSEGPAKSQCSNVKPKIS 387

BLAST of Lsi03G006110 vs. TAIR10
Match: AT3G07820.1 (AT3G07820.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 416.0 bits (1068), Expect = 2.4e-116
Identity = 189/348 (54.31%), Postives = 250/348 (71.84%), Query Frame = 1

Query: 23  GGDITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFKGPCKSPIEIRFRGTLQAPKHP 82
           G DIT+AL  A+  AC S  PS VVIPKG FK+ +   +GPCK+PIE+  +GT++A  + 
Sbjct: 32  GSDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNA 91

Query: 83  --HGDSWITFAYVDRLTLSGGGIFDGQGRAGWEKNDCHKNINCADLPISLRFDFITNSIV 142
               + W+ F  +D   L+GGG FDG+G A W  N+CHK   C  LPIS+RFDFI NS +
Sbjct: 92  IQGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEI 151

Query: 143 KRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSQIATGDD 202
           +  +S+D+KNFH+N+L   N+T + + I+APE+SPNTDGIH+GRS G+ I  S I+TGDD
Sbjct: 152 RDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDD 211

Query: 203 CISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGIIVKNCTIMNTTNGVRIKTW 262
           CIS+GDG K + V  VTCGPGHGIS+GSLG+Y +E+ V GI V NCT+  T NG+RIKTW
Sbjct: 212 CISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTW 271

Query: 263 PASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGSS 322
           P++  + TA+++HF DII+ +VSNPI+IDQEYCPWNQCN++  S IK+  +SFKNIRG+S
Sbjct: 272 PSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTS 331

Query: 323 ATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMNVRPSISG 369
               AVKL+CS   PC  V++ +ID+ YNG +G  T  C NV P I G
Sbjct: 332 GNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILG 379

BLAST of Lsi03G006110 vs. TAIR10
Match: AT3G07830.1 (AT3G07830.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 414.8 bits (1065), Expect = 5.4e-116
Identity = 188/349 (53.87%), Postives = 251/349 (71.92%), Query Frame = 1

Query: 22  PGGDITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFKGPCKSPIEIRFRGTLQAPKH 81
           PG DIT+AL  A+  AC S  P  VVIPKG FK+ +    GPCKSP+EI   GT+ A  +
Sbjct: 32  PGSDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPVEITLLGTVLADGN 91

Query: 82  P-HG-DSWITFAYVDRLTLSGGGIFDGQGRAGWEKNDCHKNINCADLPISLRFDFITNSI 141
             HG + W+ F  +D   L+GGG FDG+G A W  N+CHK   C  LPIS+RFDF+TN+ 
Sbjct: 92  SIHGKEKWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVTNAE 151

Query: 142 VKRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSQIATGD 201
           ++  +S+D+KNFH+N++   N+TF  V I+AP  SPNTDGIH+GRS+G+SI  S+I+TGD
Sbjct: 152 IRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGD 211

Query: 202 DCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGIIVKNCTIMNTTNGVRIKT 261
           DC+S+GDG   + V NV CGPGHGIS+GSLG+Y +E+ V GI V NCT+  T NG+RIKT
Sbjct: 212 DCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKT 271

Query: 262 WPASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGS 321
           WP++  + TA+N+HF +II+ NVSNPI+IDQEYCPWNQCN++  S IK++ +SF+ IRG+
Sbjct: 272 WPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGT 331

Query: 322 SATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMNVRPSISG 369
           S    AVKL+CS   PC+ V+V +I++ Y G +G  T  C NVRP + G
Sbjct: 332 SGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNVRPKLVG 380

BLAST of Lsi03G006110 vs. TAIR10
Match: AT5G48140.1 (AT5G48140.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 413.7 bits (1062), Expect = 1.2e-115
Identity = 186/348 (53.45%), Postives = 251/348 (72.13%), Query Frame = 1

Query: 22  PGGDITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFKGPCKSPIEIRFRGTLQAPKH 81
           PG DIT AL  A+N+AC     S V+IPKG +K+ +    GPCK+PI I   GT++A  +
Sbjct: 32  PGSDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKADGN 91

Query: 82  PHG-DSWITFAYVDRLTLSGGGIFDGQGRAGWEKNDCHKNINCADLPISLRFDFITNSIV 141
            +G + W+ F  ++   L+GGG+FDG+G A W  N+CHK  NC  LPIS+RFDF+T++ +
Sbjct: 92  ANGKEKWVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKI 151

Query: 142 KRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSQIATGDD 201
           +  TSLD+K+FH+N++   N+TF  V IIAP  SPNTDGIH+GRS GI I  S I+TGDD
Sbjct: 152 RGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDD 211

Query: 202 CISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGIIVKNCTIMNTTNGVRIKTW 261
           C+S+GDG K + V  VTCGPGHGISIGSLG+Y++EE V GI + NCT+  T NG+RIKTW
Sbjct: 212 CVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTW 271

Query: 262 PASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGSS 321
           P++    TA+++HF +I++ NVSNPI+IDQEYCPWNQCN++ PS IK++ +SFK IRG+S
Sbjct: 272 PSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTS 331

Query: 322 ATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMNVRPSISG 369
               AVKL+CS   PC  V+V ++++ Y G +G  T QC NV P + G
Sbjct: 332 GNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVG 379

BLAST of Lsi03G006110 vs. TAIR10
Match: AT3G07840.1 (AT3G07840.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 411.0 bits (1055), Expect = 7.8e-115
Identity = 191/349 (54.73%), Postives = 248/349 (71.06%), Query Frame = 1

Query: 22  PGGDITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFKGPCKSPIEIRFRGTLQAP-K 81
           PG DIT+AL  A+  AC +   S VVI KG FK+ +    GPCK+P+EI  +GTL+A  K
Sbjct: 32  PGSDITQALLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCKAPVEINLQGTLKADGK 91

Query: 82  HPHG-DSWITFAYVDRLTLSGGGIFDGQGRAGWEKNDCHKNINCADLPISLRFDFITNSI 141
              G + W+ F  ++   L+GGGIFDG+G A W  N+CHK   C  LPIS+RFDF+ N+ 
Sbjct: 92  AIQGKERWVVFLRINGFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVENAE 151

Query: 142 VKRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSQIATGD 201
           ++  +S+D+KNFH+N+L   N+TF  V +IAP  SPNTDGIH+GRS G+ I  S+IATGD
Sbjct: 152 IRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKILNSKIATGD 211

Query: 202 DCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGIIVKNCTIMNTTNGVRIKT 261
           DCIS+GDG K + V NV CGPGHGIS+GSLG+Y +E+ V GI V NCT+  T NG+RIKT
Sbjct: 212 DCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGTDNGLRIKT 271

Query: 262 WPASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGS 321
           WP++  A TA+ +HF +II+ NVSNPI+IDQEYCPWNQCN++ PS IK+  +SFKNIRG+
Sbjct: 272 WPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIKLVDISFKNIRGT 331

Query: 322 SATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMNVRPSISG 369
           S    AVKL+CS   PC  V++ NI+L Y G +G  T  C NV P + G
Sbjct: 332 SGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVSPKLVG 380

BLAST of Lsi03G006110 vs. TAIR10
Match: AT3G14040.1 (AT3G14040.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 372.5 bits (955), Expect = 3.1e-103
Identity = 180/350 (51.43%), Postives = 237/350 (67.71%), Query Frame = 1

Query: 25  DITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFKGPCKSPIEIRFRGTLQAPK---- 84
           D + A   AW +ACA+   S + +PKG + V    FKGPCK P+ +   G  +AP     
Sbjct: 85  DDSAAFAAAWKEACAA--GSTITVPKGEYLVESLEFKGPCKGPVTLELNGNFKAPATVKT 144

Query: 85  -HPHGDSWITFAYVDRLTLSGG-GIFDGQGRAGWEKNDCHKNINCADLPISLRFDFITNS 144
             PH   WI F  +   TL+G   IFDGQG   W+ NDC K   C  LPI++RF  +TNS
Sbjct: 145 TKPHA-GWIDFENLADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNS 204

Query: 145 IVKRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIHIGRSIGISITKSQIATG 204
            +   TS +SK FH+NIL C N+T   + I AP  S NTDGIHIGRS G+++  ++I TG
Sbjct: 205 KINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTG 264

Query: 205 DDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGIIVKNCTIMNTTNGVRIK 264
           DDC+S+GDG++ + V NV CGPGHGISIGSLG+Y NE+PV+G+ V+ C I NT NGVRIK
Sbjct: 265 DDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIK 324

Query: 265 TWPASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRKVPSKIKISKVSFKNIRG 324
           TWP SP  G A+N+ F DI M NVS P++IDQEYCP+  C   VPSK+K+S V+ KNI+G
Sbjct: 325 TWPGSP-PGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKG 384

Query: 325 SSATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMNVRPSISG 369
           +SAT VAVKL+CS  +PC  + +++I+L++NGKEG   S C N++P +SG
Sbjct: 385 TSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSG 430

BLAST of Lsi03G006110 vs. NCBI nr
Match: gi|659111053|ref|XP_008455553.1| (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 684.5 bits (1765), Expect = 1.0e-193
Identity = 321/367 (87.47%), Postives = 348/367 (94.82%), Query Frame = 1

Query: 2   VETRSHVDVIFPLRKYGDIVPGGDITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFK 61
           VE+RSHVDVIF LRKYG+IV G D+TEALKDAWNDACAS+RPSAVVIPKG FKV +G FK
Sbjct: 23  VESRSHVDVIFHLRKYGNIVSGADVTEALKDAWNDACASLRPSAVVIPKGTFKVREGEFK 82

Query: 62  GPCKSPIEIRFRGTLQAPKHPHGDSWITFAYVDRLTLSGGGIFDGQGRAGWEKNDCHKNI 121
           GPCKSP+E+R RGTLQAPKHPHGDSWITFAYVDR+TLSGGG+FDGQG+AGWEKNDCHK+I
Sbjct: 83  GPCKSPVEVRVRGTLQAPKHPHGDSWITFAYVDRMTLSGGGVFDGQGKAGWEKNDCHKHI 142

Query: 122 NCADLPISLRFDFITNSIVKRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIH 181
           +CA LPISLRF+FITNSIV+R TSLDSKNFHVNIL CNNLTF GVNIIAPE+SPNTDGIH
Sbjct: 143 SCARLPISLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFDGVNIIAPEDSPNTDGIH 202

Query: 182 IGRSIGISITKSQIATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGI 241
           IGRSIGISI KS+IATGDDCISLGDGSKRVK+TNVTCGPGHGISIGSLGKYTNEEPVEG+
Sbjct: 203 IGRSIGISILKSRIATGDDCISLGDGSKRVKITNVTCGPGHGISIGSLGKYTNEEPVEGV 262

Query: 242 IVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRK 301
           IVKNCTIMNTTNGVRIKTWPASPVAG ATNMHF DI M NVSNPI+IDQEYCPWNQCNRK
Sbjct: 263 IVKNCTIMNTTNGVRIKTWPASPVAGIATNMHFLDITMVNVSNPILIDQEYCPWNQCNRK 322

Query: 302 VPSKIKISKVSFKNIRGSSATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMN 361
           +PSKIKI+KVSFKNIRGSSATPVAVKLICSSNLPC+EVKVANIDL+YNG +G +TS+CMN
Sbjct: 323 IPSKIKINKVSFKNIRGSSATPVAVKLICSSNLPCEEVKVANIDLVYNGIKGSLTSECMN 382

Query: 362 VRPSISG 369
           V+P ISG
Sbjct: 383 VKPIISG 389

BLAST of Lsi03G006110 vs. NCBI nr
Match: gi|778730103|ref|XP_011659699.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 667.2 bits (1720), Expect = 1.7e-188
Identity = 316/368 (85.87%), Postives = 338/368 (91.85%), Query Frame = 1

Query: 2   VETRSHVDVIFPLRKYGDIVPGGDITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFK 61
           +E RSHVD IF LRKYG+IV G D+TEALKDAWNDACAS RPSAVVIPKG FKV +G FK
Sbjct: 8   IEARSHVD-IFSLRKYGNIVSGADVTEALKDAWNDACASDRPSAVVIPKGTFKVREGEFK 67

Query: 62  GPCKSPIEIRFRGTLQAPKHPHGDSWITFAYVDRLTLSGGGIFDGQGRAGWEKNDCHKNI 121
           GPCKSPIE R  GTLQAPKHPHGDSWITFAYVDR+ LSGGG+FDGQG+AGWEKNDCHK I
Sbjct: 68  GPCKSPIEFRVHGTLQAPKHPHGDSWITFAYVDRMRLSGGGVFDGQGKAGWEKNDCHKRI 127

Query: 122 NCADLPISLRFDFITNSIVKRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIH 181
           +CA LPISLRFDFITNSIV+R TSLDSKNFHVNIL CNNLTF GVNIIAPENSPNTDGIH
Sbjct: 128 DCAKLPISLRFDFITNSIVRRITSLDSKNFHVNILGCNNLTFQGVNIIAPENSPNTDGIH 187

Query: 182 IGRSIGISITKSQIATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGI 241
           IGRSIGISI KS+IATGDDCISLGDGSKR+KV NV CGPGHGISIGSLGKY NEEPVEG+
Sbjct: 188 IGRSIGISILKSRIATGDDCISLGDGSKRIKVNNVICGPGHGISIGSLGKYNNEEPVEGV 247

Query: 242 IVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRK 301
           IV NCTI+NTTNGVRIKTWPASPVAG ATNMHFSDI M NVSNPI+IDQEYCPWNQCNR+
Sbjct: 248 IVNNCTIINTTNGVRIKTWPASPVAGIATNMHFSDITMVNVSNPILIDQEYCPWNQCNRE 307

Query: 302 VPSKIKISKVSFKNIRGSSATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMN 361
           +PS IKI+KVSFKNIRGSSATPVAVKLICSSNLPC+EVKVANIDL+YNG +G ITS+CMN
Sbjct: 308 IPSNIKINKVSFKNIRGSSATPVAVKLICSSNLPCEEVKVANIDLVYNGIKGSITSECMN 367

Query: 362 VRPSISGI 370
           V+P ISGI
Sbjct: 368 VKPIISGI 374

BLAST of Lsi03G006110 vs. NCBI nr
Match: gi|700188231|gb|KGN43464.1| (hypothetical protein Csa_7G037910 [Cucumis sativus])

HSP 1 Score: 667.2 bits (1720), Expect = 1.7e-188
Identity = 316/368 (85.87%), Postives = 338/368 (91.85%), Query Frame = 1

Query: 2   VETRSHVDVIFPLRKYGDIVPGGDITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFK 61
           +E RSHVD IF LRKYG+IV G D+TEALKDAWNDACAS RPSAVVIPKG FKV +G FK
Sbjct: 23  IEARSHVD-IFSLRKYGNIVSGADVTEALKDAWNDACASDRPSAVVIPKGTFKVREGEFK 82

Query: 62  GPCKSPIEIRFRGTLQAPKHPHGDSWITFAYVDRLTLSGGGIFDGQGRAGWEKNDCHKNI 121
           GPCKSPIE R  GTLQAPKHPHGDSWITFAYVDR+ LSGGG+FDGQG+AGWEKNDCHK I
Sbjct: 83  GPCKSPIEFRVHGTLQAPKHPHGDSWITFAYVDRMRLSGGGVFDGQGKAGWEKNDCHKRI 142

Query: 122 NCADLPISLRFDFITNSIVKRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIH 181
           +CA LPISLRFDFITNSIV+R TSLDSKNFHVNIL CNNLTF GVNIIAPENSPNTDGIH
Sbjct: 143 DCAKLPISLRFDFITNSIVRRITSLDSKNFHVNILGCNNLTFQGVNIIAPENSPNTDGIH 202

Query: 182 IGRSIGISITKSQIATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGI 241
           IGRSIGISI KS+IATGDDCISLGDGSKR+KV NV CGPGHGISIGSLGKY NEEPVEG+
Sbjct: 203 IGRSIGISILKSRIATGDDCISLGDGSKRIKVNNVICGPGHGISIGSLGKYNNEEPVEGV 262

Query: 242 IVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRK 301
           IV NCTI+NTTNGVRIKTWPASPVAG ATNMHFSDI M NVSNPI+IDQEYCPWNQCNR+
Sbjct: 263 IVNNCTIINTTNGVRIKTWPASPVAGIATNMHFSDITMVNVSNPILIDQEYCPWNQCNRE 322

Query: 302 VPSKIKISKVSFKNIRGSSATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMN 361
           +PS IKI+KVSFKNIRGSSATPVAVKLICSSNLPC+EVKVANIDL+YNG +G ITS+CMN
Sbjct: 323 IPSNIKINKVSFKNIRGSSATPVAVKLICSSNLPCEEVKVANIDLVYNGIKGSITSECMN 382

Query: 362 VRPSISGI 370
           V+P ISGI
Sbjct: 383 VKPIISGI 389

BLAST of Lsi03G006110 vs. NCBI nr
Match: gi|778730075|ref|XP_011659692.1| (PREDICTED: polygalacturonase-like [Cucumis sativus])

HSP 1 Score: 538.1 bits (1385), Expect = 1.2e-149
Identity = 254/301 (84.39%), Postives = 274/301 (91.03%), Query Frame = 1

Query: 2   VETRSHVDVIFPLRKYGDIVPGGDITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFK 61
           +E++SHVDVIFPLRKYG+I        ALKDAWNDACASVRPSAVVI  GIFKV +G FK
Sbjct: 23  IESQSHVDVIFPLRKYGNI--------ALKDAWNDACASVRPSAVVIRDGIFKVREGEFK 82

Query: 62  GPCKSPIEIRFRGTLQAPKHPHGDSWITFAYVDRLTLSGGGIFDGQGRAGWEKNDCHKNI 121
           GPCKSPIEIR RGTLQAPKHPHGDSWITFAYVDR+T+SG G+FDGQG+AGWEKNDCHK I
Sbjct: 83  GPCKSPIEIRVRGTLQAPKHPHGDSWITFAYVDRMTISGKGVFDGQGKAGWEKNDCHKRI 142

Query: 122 NCADLPISLRFDFITNSIVKRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIH 181
           +C +LPISLRFDFITNSIV+  TSLDSKNFHVNIL CNNLTF GVNIIAPE+SPNTDGIH
Sbjct: 143 DCVNLPISLRFDFITNSIVRGITSLDSKNFHVNILGCNNLTFQGVNIIAPEDSPNTDGIH 202

Query: 182 IGRSIGISITKSQIATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGI 241
           IGRSIGISI KS+IATGDDCISLGDGSK+VKV NVTCGPGHGISIGSLGKYTNEEPV+ +
Sbjct: 203 IGRSIGISILKSRIATGDDCISLGDGSKQVKVANVTCGPGHGISIGSLGKYTNEEPVDDV 262

Query: 242 IVKNCTIMNTTNGVRIKTWPASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRK 301
            VKNCTIMNTTNGVRIKTWP+SPVAG ATNMHFSDI M NVSNPI+IDQEYCPWNQCNR+
Sbjct: 263 EVKNCTIMNTTNGVRIKTWPSSPVAGIATNMHFSDITMVNVSNPILIDQEYCPWNQCNRE 315

Query: 302 V 303
           V
Sbjct: 323 V 315

BLAST of Lsi03G006110 vs. NCBI nr
Match: gi|659119537|ref|XP_008459709.1| (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 494.6 bits (1272), Expect = 1.5e-136
Identity = 226/358 (63.13%), Postives = 281/358 (78.49%), Query Frame = 1

Query: 11  IFPLRKYGDIVPGGDITEALKDAWNDACASVRPSAVVIPKGIFKVSKGTFKGPCKSPIEI 70
           IF + KYG   P  DIT+AL DAW +ACAS  P  +VIP G +K+     KG CKSPIEI
Sbjct: 54  IFDVTKYG-AKPNADITQALADAWKEACASTSPCKIVIPTGTYKLGTIELKGECKSPIEI 113

Query: 71  RFRGTLQAPKHPHGDSWITFAYVDRLTLSGGGIFDGQGRAGWEKNDCHKNINCADLPISL 130
           + +GTLQAP    G+ W+ F Y+D L+++ GG+FDGQG+  WE NDC KN  CA +P++L
Sbjct: 114 QVQGTLQAPPDLTGEDWVHFKYIDYLSVTSGGVFDGQGKQAWESNDCDKNPKCARIPMNL 173

Query: 131 RFDFITNSIVKRTTSLDSKNFHVNILRCNNLTFHGVNIIAPENSPNTDGIHIGRSIGISI 190
           +F FI N+IV   TS DSKNFH+ +L CNNLTF  VN+ APE S NTDGIHIGRS+GI+I
Sbjct: 174 KFSFIKNAIVSDITSKDSKNFHIQVLGCNNLTFQHVNVNAPETSINTDGIHIGRSLGINI 233

Query: 191 TKSQIATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEPVEGIIVKNCTIMN 250
             + I TGDDCISLGDGSK+V +TNVTCGPGHGIS+GSLG+Y  EEPVEG+ VKNCT+  
Sbjct: 234 LNTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYNLEEPVEGLQVKNCTLTG 293

Query: 251 TTNGVRIKTWPASPVAGTATNMHFSDIIMANVSNPIVIDQEYCPWNQCNRKVPSKIKISK 310
           TTNG+RIKTWPASP AG A++MH+ D++M NV NPI+IDQEYCP+NQCN++VPSK+KISK
Sbjct: 294 TTNGLRIKTWPASPAAGVASDMHYEDVVMNNVMNPILIDQEYCPYNQCNKQVPSKVKISK 353

Query: 311 VSFKNIRGSSATPVAVKLICSSNLPCDEVKVANIDLIYNGKEGLITSQCMNVRPSISG 369
           VSFKNIRG+S    AV L+CSS+ PCD V++A+IDL Y+G EG ITS+C NV+P++SG
Sbjct: 354 VSFKNIRGTSGNAAAVTLVCSSSNPCDGVELADIDLTYSGSEGPITSRCANVKPTVSG 410

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PGLR_OENOR1.0e-11657.47Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1[more]
PGLR_GOSHI5.6e-11553.30Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1[more]
PGLR_GOSBA2.1e-11453.02Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1[more]
PGLR_TOBAC1.1e-11052.35Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1[more]
PGLR_MEDSA3.5e-10951.77Polygalacturonase OS=Medicago sativa PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0K3B7_CUCSA1.2e-18885.87Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037910 PE=3 SV=1[more]
W9SC16_9ROSA1.5e-13060.99Uncharacterized protein OS=Morus notabilis GN=L484_020041 PE=3 SV=1[more]
A0A147BN67_IXORI2.1e-12959.89Putative polygalacturonase/glycoside hydrolase family protein (Fragment) OS=Ixod... [more]
E3VSV7_CUCPE2.1e-12961.00Polygalacturonase OS=Cucurbita pepo GN=PG1 PE=2 SV=1[more]
Q9MBB9_SALGI3.6e-12960.77Polygalacturonase OS=Salix gilgiana GN=SgPG2 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT3G07820.12.4e-11654.31 Pectin lyase-like superfamily protein[more]
AT3G07830.15.4e-11653.87 Pectin lyase-like superfamily protein[more]
AT5G48140.11.2e-11553.45 Pectin lyase-like superfamily protein[more]
AT3G07840.17.8e-11554.73 Pectin lyase-like superfamily protein[more]
AT3G14040.13.1e-10351.43 Pectin lyase-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659111053|ref|XP_008455553.1|1.0e-19387.47PREDICTED: exopolygalacturonase-like [Cucumis melo][more]
gi|778730103|ref|XP_011659699.1|1.7e-18885.87PREDICTED: exopolygalacturonase-like [Cucumis sativus][more]
gi|700188231|gb|KGN43464.1|1.7e-18885.87hypothetical protein Csa_7G037910 [Cucumis sativus][more]
gi|778730075|ref|XP_011659692.1|1.2e-14984.39PREDICTED: polygalacturonase-like [Cucumis sativus][more]
gi|659119537|ref|XP_008459709.1|1.5e-13663.13PREDICTED: exopolygalacturonase-like [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence
IPR006626PbH1
IPR000743Glyco_hydro_28
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071555 cell wall organization
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0004650 polygalacturonase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G006110.1Lsi03G006110.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 38..363
score: 1.2
IPR000743Glycoside hydrolase, family 28PROSITEPS00502POLYGALACTURONASEcoord: 215..228
scor
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 269..290
score: 8200.0coord: 185..206
score: 1600.0coord: 238..259
score: 0.43coord: 158..184
score: 70.0coord: 336..358
score: 5100.0coord: 208..228
score: 28
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 24..368
score: 1.24E
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 25..367
score: 3.4E
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 9..369
score: 2.0E
NoneNo IPR availablePANTHERPTHR31375:SF37PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 9..369
score: 2.0E