Lsi03G006080 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G006080
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Cysteine-rich venom protein
Location	chr03 : 7613253 .. 7613714 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCTAACCCTAACCATAGCTTCCATTGCCCCCATCTTGGCTAAAAGCTACCCTAAAAACTACATGGCCGCCCACAACGCTATTCGGGCAGAGGTTGGCGTCGAGCCCCCCCATTGGAACAACACTTTGGCTGCCTATGCCCAGAATTACGCCAACACGAAGATCACTACTTGCCAAATGGAGCACTCTAGAGGACCTTATGGTGAAAACCTAGCAGAGGGATACGAAGTGATGACAGCAGAAACGGCAGTGAGTCTTTGGGCCGACGAGAAGAAACATTACGACTACAATTCTAACACGTGTGTCAACGATTCTAGCCATTGCCTCCATTATACACAGTTGGTATGGAGGAACACCAAATCTATTGGTTGTGCCCAAGTGAAGTGCCAAAACAATTGGGTTTTTCTAATATGCAACTATTATCCTCCTGGCAACTATATAGGCCAACATCCATATTAA

mRNA sequence

ATGGGGCTAACCCTAACCATAGCTTCCATTGCCCCCATCTTGGCTAAAAGCTACCCTAAAAACTACATGGCCGCCCACAACGCTATTCGGGCAGAGGTTGGCGTCGAGCCCCCCCATTGGAACAACACTTTGGCTGCCTATGCCCAGAATTACGCCAACACGAAGATCACTACTTGCCAAATGGAGCACTCTAGAGGACCTTATGGTGAAAACCTAGCAGAGGGATACGAAGTGATGACAGCAGAAACGGCAGTGAGTCTTTGGGCCGACGAGAAGAAACATTACGACTACAATTCTAACACGTGTGTCAACGATTCTAGCCATTGCCTCCATTATACACAGTTGGTATGGAGGAACACCAAATCTATTGGTTGTGCCCAAGTGAAGTGCCAAAACAATTGGGTTTTTCTAATATGCAACTATTATCCTCCTGGCAACTATATAGGCCAACATCCATATTAA

Coding sequence (CDS)

ATGGGGCTAACCCTAACCATAGCTTCCATTGCCCCCATCTTGGCTAAAAGCTACCCTAAAAACTACATGGCCGCCCACAACGCTATTCGGGCAGAGGTTGGCGTCGAGCCCCCCCATTGGAACAACACTTTGGCTGCCTATGCCCAGAATTACGCCAACACGAAGATCACTACTTGCCAAATGGAGCACTCTAGAGGACCTTATGGTGAAAACCTAGCAGAGGGATACGAAGTGATGACAGCAGAAACGGCAGTGAGTCTTTGGGCCGACGAGAAGAAACATTACGACTACAATTCTAACACGTGTGTCAACGATTCTAGCCATTGCCTCCATTATACACAGTTGGTATGGAGGAACACCAAATCTATTGGTTGTGCCCAAGTGAAGTGCCAAAACAATTGGGTTTTTCTAATATGCAACTATTATCCTCCTGGCAACTATATAGGCCAACATCCATATTAA

Protein sequence

MGLTLTIASIAPILAKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQMEHSRGPYGENLAEGYEVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNTKSIGCAQVKCQNNWVFLICNYYPPGNYIGQHPY

Homology

[Close]

BLAST of Lsi03G006080 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.4e-43
Identity = 78/139 (56.12%), Postives = 99/139 (71.22%), Query Frame = 1


Query: 15  AKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQMEHSRGPYGENLAE 74
           A++ P++Y+  HNA R +VGV P  W+N LAAYAQNYAN +I  C M HS GPYGENLA 
Sbjct: 23  AQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGPYGENLAA 82

Query: 75  GYEVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNTKSIGCAQVKCQNNW 134
            +  + A  AV +W DEK+ YDYNSN+CV     C HYTQ+VWRN+  +GCA+V+  N W
Sbjct: 83  AFPQLNAAGAVKMWVDEKRFYDYNSNSCV--GGVCGHYTQVVWRNSVRLGCARVRSNNGW 142

Query: 135 VFLICNYYPPGNYIGQHPY 154
            F+ CNY PPGN+IGQ P+
Sbjct: 143 FFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of Lsi03G006080 vs. Swiss-Prot
Match: PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.1e-39
Identity = 74/134 (55.22%), Postives = 93/134 (69.40%), Query Frame = 1


Query: 15  AKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQMEHSRGPYGENLAE 74
           A++  +N++ AHNA R  VGV P  W++ LAAYAQNYAN +   C M HS GPYGENLA 
Sbjct: 21  AQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGENLAA 80

Query: 75  GYEVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNTKSIGCAQVKCQNNW 134
            +  + A  AV +W DEK+ YDYNSNTC      C HYTQ+VWR +  +GCA+V+C + W
Sbjct: 81  AFPQLNAAGAVKMWDDEKQWYDYNSNTCA-PGKVCGHYTQVVWRKSVRLGCARVRCNSGW 140

Query: 135 VFLICNYYPPGNYI 149
           VF+ CNY PPGNYI
Sbjct: 141 VFITCNYDPPGNYI 153

[Close]

BLAST of Lsi03G006080 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.7e-39
Identity = 75/140 (53.57%), Postives = 97/140 (69.29%), Query Frame = 1


Query: 15  AKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQMEHSRGPYGENLAE 74
           A++  ++Y+ AHN  RA+VGVEP  W+N +AAYAQNY +     C + HS G YGENLA+
Sbjct: 30  AQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADCNLVHSHGQYGENLAQ 89

Query: 75  GY-EVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNTKSIGCAQVKCQNN 134
           G  + MTA  AV +W DEK++YD++SNTC      C HYTQ+VWRN+  +GCA+VKC N 
Sbjct: 90  GSGDFMTAAKAVEMWVDEKQYYDHDSNTCA-QGQVCGHYTQVVWRNSVRVGCARVKCNNG 149

Query: 135 WVFLICNYYPPGNYIGQHPY 154
              + CNY PPGN IGQ PY
Sbjct: 150 GYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of Lsi03G006080 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.1e-39
Identity = 74/140 (52.86%), Postives = 98/140 (70.00%), Query Frame = 1


Query: 15  AKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQMEHSRGPYGENLAE 74
           A++  ++Y+ AHN  RA+VGVEP  W++ +AAYAQNYA+     C + HS G YGENLAE
Sbjct: 30  AQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHSHGQYGENLAE 89

Query: 75  GY-EVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNTKSIGCAQVKCQNN 134
           G  + MTA  AV +W DEK++YD++SNTC      C HYTQ+VWRN+  +GCA+V+C N 
Sbjct: 90  GSGDFMTAAKAVEMWVDEKQYYDHDSNTCA-QGQVCGHYTQVVWRNSVRVGCARVQCNNG 149

Query: 135 WVFLICNYYPPGNYIGQHPY 154
              + CNY PPGNY G+ PY
Sbjct: 150 GYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of Lsi03G006080 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.1e-37
Identity = 70/146 (47.95%), Postives = 99/146 (67.81%), Query Frame = 1


Query: 8   ASIAPILAKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQMEHSRGP 67
           A + P+ A+   ++Y+ AHN  R+++GV P  W+  LAAYA+NYAN     C++ HSRGP
Sbjct: 19  ALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGP 78

Query: 68  YGENLAEGYEVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNTKSIGCAQ 127
           YGENLA+    ++   AV+LW +EK +Y+Y++NTC   +  C HYTQ+VWRN+  +GCA+
Sbjct: 79  YGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC---NGVCGHYTQVVWRNSVRLGCAK 138

Query: 128 VKCQNNWVFLICNYYPPGNYIGQHPY 154
           V+C N    + CNY PPGNY  Q PY
Sbjct: 139 VRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Lsi03G006080 vs. TrEMBL
Match: A0A0A0K7N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070232 PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 1.7e-72
Identity = 129/151 (85.43%), Postives = 136/151 (90.07%), Query Frame = 1


Query: 3   LTLTIASIAPILAKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQME 62
           LTLT+AS AP LAKS PKNY+ AHNA+RA VGVEP HWN+TLA YAQNYANTKI TCQME
Sbjct: 21  LTLTLASTAPSLAKSSPKNYIDAHNAVRAAVGVEPLHWNSTLADYAQNYANTKIATCQME 80

Query: 63  HSRGPYGENLAEGYEVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNTKS 122
           HS GPYGENLAEG EVMTAETAVSLWADEKKHYDYNSNTC ND S+CLHYTQLVW NTKS
Sbjct: 81  HSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTCSNDPSNCLHYTQLVWSNTKS 140

Query: 123 IGCAQVKCQNNWVFLICNYYPPGNYIGQHPY 154
           +GCAQVKCQNNWVFLIC+YYPPGNY GQ PY
Sbjct: 141 VGCAQVKCQNNWVFLICSYYPPGNYNGQRPY 171

[Close]

BLAST of Lsi03G006080 vs. TrEMBL
Match: A0A0A0K4C1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070225 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.1e-50
Identity = 95/153 (62.09%), Postives = 116/153 (75.82%), Query Frame = 1


Query: 1   MGLTLTIASIAPILAKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQ 60
           MGL   +ASI   LA++  ++++ AHNA RA+VGV P  WN TLAAYAQ YAN KI TC+
Sbjct: 14  MGLITQLASIT--LAQNSHQDFVNAHNAARAKVGVGPVSWNYTLAAYAQTYANKKIGTCE 73

Query: 61  MEHSRGPYGENLAEGYEVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNT 120
           M+HS GPYGENLAEGY  MTA  AV+ W  EKK+YD++SN C+ D   C HYTQ+VWR T
Sbjct: 74  MQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGD--ECRHYTQVVWRGT 133

Query: 121 KSIGCAQVKCQNNWVFLICNYYPPGNYIGQHPY 154
           K +GCA+VKC NNW+F+ICNY PP NY+GQ PY
Sbjct: 134 KHVGCARVKCHNNWIFVICNYDPPDNYVGQFPY 162

[Close]

BLAST of Lsi03G006080 vs. TrEMBL
Match: A0A0A0K6A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070235 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.0e-48
Identity = 88/139 (63.31%), Postives = 111/139 (79.86%), Query Frame = 1


Query: 15  AKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQMEHSRGPYGENLAE 74
           A++ P++++  HN IRA VGV P  W++TLAAYAQ+YA++K+ TC+MEHS GPYGENLAE
Sbjct: 25  AQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQSYADSKMDTCEMEHSNGPYGENLAE 84

Query: 75  GYEVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNTKSIGCAQVKCQNNW 134
           GY+ MT   AV  WA EKK Y+++ N CV D   C HYTQ+VWR+T +IGC +VKC+NNW
Sbjct: 85  GYDEMTGVEAVRFWATEKKFYNHHLNRCVGD--ECGHYTQIVWRHTTNIGCGRVKCENNW 144

Query: 135 VFLICNYYPPGNYIGQHPY 154
           VF+ICNY PPGNYIGQHPY
Sbjct: 145 VFVICNYNPPGNYIGQHPY 161

[Close]

BLAST of Lsi03G006080 vs. TrEMBL
Match: A0A0A0K2C5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070230 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.9e-47
Identity = 89/153 (58.17%), Postives = 112/153 (73.20%), Query Frame = 1


Query: 1   MGLTLTIASIAPILAKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQ 60
           +GL L +A I+P LA S P++++ AHNAIRA+ GV P  WN T+A+YA+ YA TK  TC+
Sbjct: 14  VGLFLILAPISPTLANSTPQDFVDAHNAIRAKYGVGPVTWNKTIASYAEKYAKTKTATCE 73

Query: 61  MEHSRGPYGENLAEGYEVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNT 120
           MEHS GPYGENLAE +E  TAE  V+ WA E K YD+ SN CV +   C H+ Q+VW++T
Sbjct: 74  MEHSMGPYGENLAEAFEKTTAELTVNYWASEDKFYDHKSNKCVEE--ECGHFLQIVWKDT 133

Query: 121 KSIGCAQVKCQNNWVFLICNYYPPGNYIGQHPY 154
            SIGCA+VKC NN++F ICNYYPPG Y  Q PY
Sbjct: 134 TSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164

[Close]

BLAST of Lsi03G006080 vs. TrEMBL
Match: A0A0L9TL64_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g073200 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 3.9e-45
Identity = 80/139 (57.55%), Postives = 99/139 (71.22%), Query Frame = 1


Query: 15  AKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQMEHSRGPYGENLAE 74
           A++ PK+Y+  HN  R EVGV+P  WN TL AY Q Y N+K  TC+ EHS GPYGENLA+
Sbjct: 7   AQNSPKDYLDEHNKARKEVGVKPLKWNETLVAYGQKYVNSKKKTCEFEHSMGPYGENLAQ 66

Query: 75  GYEVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNTKSIGCAQVKCQNNW 134
           GY   +   +V +W  EK +YD  +N CV D   CLHYTQ+VW  T+S+GCA+ KC NNW
Sbjct: 67  GYGEFSGVDSVKMWVGEKPNYDEKNNKCVKD--ECLHYTQVVWNTTESVGCARTKCDNNW 126

Query: 135 VFLICNYYPPGNYIGQHPY 154
           +F+ICNYYPPGNYIG  PY
Sbjct: 127 MFIICNYYPPGNYIGSRPY 143

[Close]

BLAST of Lsi03G006080 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 166.4 bits (420), Expect = 1.4e-41
Identity = 74/153 (48.37%), Postives = 102/153 (66.67%), Query Frame = 1


Query: 1   MGLTLTIASIAPILAKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQ 60
           + +T  +  I  + A+  P++++A HN  RAEVGV P  W+  +AAYA+NYAN +   C 
Sbjct: 12  LAITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCA 71

Query: 61  MEHSRGPYGENLAEGYEVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNT 120
           M+HS G YGEN+A     MT   AV +W DE+  YDY+SNTC  D   C HYTQ+VWRN+
Sbjct: 72  MKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWD-KQCGHYTQVVWRNS 131

Query: 121 KSIGCAQVKCQNNWVFLICNYYPPGNYIGQHPY 154
           + +GCA+V+C N   F+ CNY PPGN++G+ PY
Sbjct: 132 ERLGCAKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Lsi03G006080 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 161.4 bits (407), Expect = 4.5e-40
Identity = 72/150 (48.00%), Postives = 102/150 (68.00%), Query Frame = 1


Query: 5   LTIASIAPILAKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQMEHS 64
           L IA     LA+   + ++ AHN  R EVG++P  W++ +AAYA +YAN +I  C + HS
Sbjct: 12  LAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRINDCALVHS 71

Query: 65  RGPYGENLAEGYEVMTAETAVSLWADEKKHYDYNSNTCVN-DSSHCLHYTQLVWRNTKSI 124
            GP+GEN+A     M+AE A  +W +EK++YDY+SNTC + +   CLHYTQ+VW+NT  +
Sbjct: 72  NGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWKNTVRL 131

Query: 125 GCAQVKCQNNWVFLICNYYPPGNYIGQHPY 154
           GCA+V C +   F+ CNY PPGNYIG+ P+
Sbjct: 132 GCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of Lsi03G006080 vs. TAIR10
Match: AT2G19990.1 (AT2G19990.1 pathogenesis-related protein-1-like)

HSP 1 Score: 159.5 bits (402), Expect = 1.7e-39
Identity = 71/136 (52.21%), Postives = 95/136 (69.85%), Query Frame = 1


Query: 19  PKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQMEHSRGPYGENLAEGYEV 78
           P+  +  HN  RA VGV P  WN TLA YAQ+YA+ +   C M+HS GP+GENLA G+  
Sbjct: 42  PQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAGWGT 101

Query: 79  MTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNTKSIGCAQVKCQNN-WVFL 138
           M+   A   W  EK++YDY+SNTC  D   C HYTQ+VWR++  +GCA V+C+N+ ++++
Sbjct: 102 MSGPVATEYWMTEKENYDYDSNTCGGDGV-CGHYTQIVWRDSVRLGCASVRCKNDEYIWV 161

Query: 139 ICNYYPPGNYIGQHPY 154
           IC+Y PPGNYIGQ PY
Sbjct: 162 ICSYDPPGNYIGQRPY 176

[Close]

BLAST of Lsi03G006080 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 159.1 bits (401), Expect = 2.2e-39
Identity = 71/140 (50.71%), Postives = 96/140 (68.57%), Query Frame = 1


Query: 15  AKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQMEHSRGPYGENLAE 74
           A++ P++Y+ +HN  RA+VGV    W+ TLAAYA NY+N +   C + HS GPYGENLA+
Sbjct: 23  AQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGPYGENLAK 82

Query: 75  G-YEVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNTKSIGCAQVKCQNN 134
           G     +A +AV LW DEK +Y Y  N C      CLHYTQ+VWR++  IGCA+V+C N 
Sbjct: 83  GSSSSFSAISAVKLWVDEKPYYSYAYNNCTG-GKQCLHYTQVVWRDSVKIGCARVQCTNT 142

Query: 135 WVFLICNYYPPGNYIGQHPY 154
           W F+ CNY  PGN++G++PY
Sbjct: 143 WWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of Lsi03G006080 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 157.5 bits (397), Expect = 6.4e-39
Identity = 70/146 (47.95%), Postives = 99/146 (67.81%), Query Frame = 1


Query: 8   ASIAPILAKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQMEHSRGP 67
           A + P+ A+   ++Y+ AHN  R+++GV P  W+  LAAYA+NYAN     C++ HSRGP
Sbjct: 19  ALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGP 78

Query: 68  YGENLAEGYEVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNTKSIGCAQ 127
           YGENLA+    ++   AV+LW +EK +Y+Y++NTC   +  C HYTQ+VWRN+  +GCA+
Sbjct: 79  YGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC---NGVCGHYTQVVWRNSVRLGCAK 138

Query: 128 VKCQNNWVFLICNYYPPGNYIGQHPY 154
           V+C N    + CNY PPGNY  Q PY
Sbjct: 139 VRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Lsi03G006080 vs. NCBI nr
Match: gi|659110139|ref|XP_008455069.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 297.4 bits (760), Expect = 1.5e-77
Identity = 134/153 (87.58%), Postives = 144/153 (94.12%), Query Frame = 1


Query: 1   MGLTLTIASIAPILAKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQ 60
           +GLTLT+AS APILAKSYPKNY+ AHNAIRAEVGV+P HWN+TLAAYAQNYANTKI TCQ
Sbjct: 13  LGLTLTLASTAPILAKSYPKNYVDAHNAIRAEVGVDPLHWNSTLAAYAQNYANTKIATCQ 72

Query: 61  MEHSRGPYGENLAEGYEVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNT 120
           MEHS GPYGENLAEGYE MTAE AVSLWADEKKHYDYNSNTC ND+S+CLHYTQLVWRNT
Sbjct: 73  MEHSGGPYGENLAEGYEEMTAEMAVSLWADEKKHYDYNSNTCTNDASNCLHYTQLVWRNT 132

Query: 121 KSIGCAQVKCQNNWVFLICNYYPPGNYIGQHPY 154
           KS+GCA+VKCQNNWVFLIC+YYPPGNYIGQ PY
Sbjct: 133 KSVGCAEVKCQNNWVFLICSYYPPGNYIGQRPY 165

[Close]

BLAST of Lsi03G006080 vs. NCBI nr
Match: gi|778724756|ref|XP_004137080.2| (PREDICTED: pathogenesis-related protein 1A-like [Cucumis sativus])

HSP 1 Score: 280.0 bits (715), Expect = 2.4e-72
Identity = 129/151 (85.43%), Postives = 136/151 (90.07%), Query Frame = 1


Query: 3   LTLTIASIAPILAKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQME 62
           LTLT+AS AP LAKS PKNY+ AHNA+RA VGVEP HWN+TLA YAQNYANTKI TCQME
Sbjct: 21  LTLTLASTAPSLAKSSPKNYIDAHNAVRAAVGVEPLHWNSTLADYAQNYANTKIATCQME 80

Query: 63  HSRGPYGENLAEGYEVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNTKS 122
           HS GPYGENLAEG EVMTAETAVSLWADEKKHYDYNSNTC ND S+CLHYTQLVW NTKS
Sbjct: 81  HSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTCSNDPSNCLHYTQLVWSNTKS 140

Query: 123 IGCAQVKCQNNWVFLICNYYPPGNYIGQHPY 154
           +GCAQVKCQNNWVFLIC+YYPPGNY GQ PY
Sbjct: 141 VGCAQVKCQNNWVFLICSYYPPGNYNGQRPY 171

[Close]

BLAST of Lsi03G006080 vs. NCBI nr
Match: gi|449438289|ref|XP_004136921.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 205.7 bits (522), Expect = 5.8e-50
Identity = 95/153 (62.09%), Postives = 116/153 (75.82%), Query Frame = 1


Query: 1   MGLTLTIASIAPILAKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQ 60
           MGL   +ASI   LA++  ++++ AHNA RA+VGV P  WN TLAAYAQ YAN KI TC+
Sbjct: 14  MGLITQLASIT--LAQNSHQDFVNAHNAARAKVGVGPVSWNYTLAAYAQTYANKKIGTCE 73

Query: 61  MEHSRGPYGENLAEGYEVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNT 120
           M+HS GPYGENLAEGY  MTA  AV+ W  EKK+YD++SN C+ D   C HYTQ+VWR T
Sbjct: 74  MQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGD--ECRHYTQVVWRGT 133

Query: 121 KSIGCAQVKCQNNWVFLICNYYPPGNYIGQHPY 154
           K +GCA+VKC NNW+F+ICNY PP NY+GQ PY
Sbjct: 134 KHVGCARVKCHNNWIFVICNYDPPDNYVGQFPY 162

[Close]

BLAST of Lsi03G006080 vs. NCBI nr
Match: gi|659110143|ref|XP_008455071.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 204.1 bits (518), Expect = 1.7e-49
Identity = 92/152 (60.53%), Postives = 117/152 (76.97%), Query Frame = 1


Query: 3   LTLTIASIAPI-LAKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQM 62
           + + + ++API LA++  ++++ AHN  RA+VGV P  WN TLAAYAQ YAN KI TC+M
Sbjct: 12  MMMGLITLAPITLAQNSHQDFVNAHNNARAKVGVGPVSWNYTLAAYAQTYANKKIGTCEM 71

Query: 63  EHSRGPYGENLAEGYEVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNTK 122
           +HS GPYGENLAEGY  MTA  AV+ W  EKK+YD++SN C+ D   C HYTQ+VWR TK
Sbjct: 72  QHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGD--ECRHYTQVVWRGTK 131

Query: 123 SIGCAQVKCQNNWVFLICNYYPPGNYIGQHPY 154
            +GCA+VKC NNW+F+ICNY PPGNY+GQ PY
Sbjct: 132 HVGCARVKCHNNWIFVICNYDPPGNYVGQFPY 161

[Close]

BLAST of Lsi03G006080 vs. NCBI nr
Match: gi|659110137|ref|XP_008455068.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 202.6 bits (514), Expect = 4.9e-49
Identity = 89/139 (64.03%), Postives = 111/139 (79.86%), Query Frame = 1


Query: 15  AKSYPKNYMAAHNAIRAEVGVEPPHWNNTLAAYAQNYANTKITTCQMEHSRGPYGENLAE 74
           A++ P++++  HN IRA VGV P  W++TLAAYAQ+YA++KI TC+MEHS GPYGENLAE
Sbjct: 26  AQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQSYADSKIDTCEMEHSNGPYGENLAE 85

Query: 75  GYEVMTAETAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNTKSIGCAQVKCQNNW 134
           GY+ MT   AV  WA EKK Y+++ N CV D   C HYTQ+VWR+T +IGC +VKC+NNW
Sbjct: 86  GYDEMTGVEAVKFWATEKKFYNHHLNRCVGD--ECGHYTQIVWRHTTNIGCGRVKCENNW 145

Query: 135 VFLICNYYPPGNYIGQHPY 154
           VF+ICNY PPGNYIGQHPY
Sbjct: 146 VFVICNYNPPGNYIGQHPY 162

The following BLAST results are available for this feature:

BLAST of Lsi03G006080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	2.4e-43	56.12	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR1A_SOLLC	2.1e-39	55.22	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1	[more]
PR1B_TOBAC	2.7e-39	53.57	Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1	[more]
PR1A_TOBAC	6.1e-39	52.86	Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1	[more]
PRB1_ARATH	1.1e-37	47.95	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1	[more]

BLAST of Lsi03G006080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7N5_CUCSA	1.7e-72	85.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070232 PE=3 SV=1	[more]
A0A0A0K4C1_CUCSA	4.1e-50	62.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070225 PE=3 SV=1	[more]
A0A0A0K6A0_CUCSA	1.0e-48	63.31	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070235 PE=3 SV=1	[more]
A0A0A0K2C5_CUCSA	1.9e-47	58.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070230 PE=4 SV=1	[more]
A0A0L9TL64_PHAAN	3.9e-45	57.55	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g073200 PE=3 SV=1	[more]

BLAST of Lsi03G006080 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33720.1	1.4e-41	48.37	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT3G19690.1	4.5e-40	48.00	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G19990.1	1.7e-39	52.21	pathogenesis-related protein-1-like	[more]
AT1G50060.1	2.2e-39	50.71	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14580.1	6.4e-39	47.95	basic pathogenesis-related protein 1	[more]

BLAST of Lsi03G006080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110139\|ref\|XP_008455069.1\|	1.5e-77	87.58	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|778724756\|ref\|XP_004137080.2\|	2.4e-72	85.43	PREDICTED: pathogenesis-related protein 1A-like [Cucumis sativus]	[more]
gi\|449438289\|ref\|XP_004136921.1\|	5.8e-50	62.09	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|659110143\|ref\|XP_008455071.1\|	1.7e-49	60.53	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|659110137\|ref\|XP_008455068.1\|	4.9e-49	64.03	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

Vocabulary: **INTERPRO**
Term	Definition
IPR018244	Allrgn_V5/Tpx1_CS
IPR014044	CAP_domain
IPR001283	Allrgn_V5/Tpx1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G006080.1	Lsi03G006080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 38..56 score: 4.8E-18coord: 84..97 score: 4.8E-18coord: 109..125 score: 4.8E-18coord: 136..149 score: 4.8
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 1..153 score: 4.9
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 16..153 score: 9.4
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 24..141 score: 6.0
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 17..149 score: 2.1
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 16..153 score: 3.53
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 136..147 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 1..153 score: 4.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi03G006080	CmaCh11G016890	Cucurbita maxima (Rimu)	cmalsiB116
Lsi03G006080	Bhi05G000856	Wax gourd	lsiwgoB319
Lsi03G006080	Bhi05G000867	Wax gourd	lsiwgoB320

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G006080	Cucumber (Chinese Long) v3	cuclsiB555
Lsi03G006080	Watermelon (97103) v2	lsiwmbB226
Lsi03G006080	Wax gourd	lsiwgoB307
Lsi03G006080	Bottle gourd (USVL1VR-Ls)	lsilsiB126
Lsi03G006080	Cucumber (Gy14) v1	cgylsiB367
Lsi03G006080	Cucurbita maxima (Rimu)	cmalsiB484
Lsi03G006080	Cucurbita maxima (Rimu)	cmalsiB662
Lsi03G006080	Cucurbita moschata (Rifu)	cmolsiB103
Lsi03G006080	Cucurbita moschata (Rifu)	cmolsiB468
Lsi03G006080	Cucurbita moschata (Rifu)	cmolsiB650
Lsi03G006080	Cucurbita pepo (Zucchini)	cpelsiB208
Lsi03G006080	Cucurbita pepo (Zucchini)	cpelsiB543
Lsi03G006080	Wild cucumber (PI 183967)	cpilsiB536
Lsi03G006080	Cucumber (Chinese Long) v2	culsiB522
Lsi03G006080	Melon (DHL92) v3.5.1	lsimeB247
Lsi03G006080	Melon (DHL92) v3.5.1	lsimeB268
Lsi03G006080	Watermelon (Charleston Gray)	lsiwcgB223
Lsi03G006080	Watermelon (Charleston Gray)	lsiwcgB233
Lsi03G006080	Watermelon (97103) v1	lsiwmB245
Lsi03G006080	Watermelon (97103) v1	lsiwmB268
Lsi03G006080	Melon (DHL92) v3.6.1	lsimedB260
Lsi03G006080	Melon (DHL92) v3.6.1	lsimedB281