Lsi03G005840 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G005840
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Myosin heavy chain-like protein
Location	chr03 : 7257354 .. 7262234 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAACGGTGGACAATCTTCAAAATAAGCTACGGATGGTATGATTGGTTTCTCCAATATTTCAACTTTGCATTTAACATCTTCGTGGGTTTAACTGGGAATCTTTATGTGGGTGTAGGGTGTGGAAATTGAAAAGCATTTAAAGCTGAAAGTGCATGATTTGGAATTGAAGTTGGTCAGTACTTCCGCCTTTTTTTTTCCTTATTATTTTTGTTCAGCTCAGTTTGGTTCTTTATTTGTACTAAGGTCTTTACTTTGTTTTGTCTTTATTATGATGTATTTCGAGCATTAGTCTCTTTTCATTTACTTAATGAAAAATTTCGTATCCATTTCAAAAAATACTTCCACCTTTTGAGTAGATATATCCTAATTTAACCATCATGGGTTGGCCTAGTGGTAAAAAATGAGACAAAGTCTCAATAAATGGCTAAAAGGTCATGGGTTCAATTCATAGTGGCCATCTATCTAGGAATTAATTTCCTAAGAGTTTCCTTGACACCCAATTGTTGTAGGGTCAGGCGAGTTGTCCTGTGAGATTAGTCGAGGTGCGCGTAAGCTGGCCCAGACACTCACGGATATAAAAAAAAATGTAGATATATCCTTATTTTATTCATAAATCATCATGTTTACCTCTAATGCAGATTCGCATGGATGATATGGTCAAGAGCAAGATTTCAGGGTTTTGTCAATACTATTCTCAATATCGAGATCATATATTGAATTTATTGGACAAAGAAACGTCTAATATGAATTCAACAATAGGAGAGATTGAAGAAAAGATTATGCAATATGGCTGGGGTGTTCAAAATTTGAAGGATTCTGAGAAAGTGCTGAAACCAGACCATGATTCCCAGGATGAGCATTTGAGTACCAATGCCAAGGTGGGTATACTGGATGCAGAAATGAACTGCTTTCAACTGGGAATAAATGATAATGGAGTATCTATGCAGTTTCTGTAATGTGGTTCTTGTTTTTCCAATAGTATTATAGGCTTATGGATTTACTATTTGTGATTGCTCACGCAGTAGTCCATTTGTCTATCGCTAGTTTGTATATAGTTTCATTCAGTGAAACTACTTTTGGTCCTTCTTATGTTGGGCTTCCTTGATTCCGCTCGTCTTTTCTTTGTGCTTCGTTGGGGTGGAGTAACTCGATATCCTTATATAGCAGGTGACATACCTTGTAGACTAAAACTACTAAAGAGGCATTTAGCATGCAGGAATGAGATTCTGAAGCCTAGGATTAAAAAGAACAAGATTAGGAAGAATCTGACTTAACCTATGTTTGGATGTGTATGAGATTGATATTTACTACAAGCGTGAGAATATATAAGCAGTGTTCAATTTGTGGGAATGTAATTTGTGAAAAGTATCTTGTAAATTTATTTTTTTTATTTATAAGATGGAATTTCTTAAATTAATTTTATTAACTGAATAAGAACTTATTTAATGTGCATGATGTCTATGTGGTCTTCTACACTTCTTATGGCATTTTGGTTTTCACATGGAATGAAATGTTAAAGACCAGATTTTTTCATCCTTTCTTCAGTGAAGTTTTATGAGCAAGTGTAGGGTTTGTCATGAGGATGGGGTCAAATTTCTTACGACTTTTTGAACGTATTGTAGATGAAAATTCCTGGCTTACAAGATTCCATTGCTGATGGAAATGTCGAGGCCTCTGAAGCCCTCGCTTTGGCACTTCAAGAAAAGGTACTACATTATTCCCATAGTTCTTTTCTGTTCCTCTGTTGTGTTGACTAGTCTTGCATGATTCAGCAATAACCGCTTCTATATTATCTTAGGGTGTATTGTCCTATCTTTTTTCTAATTGTTCTCTTAACTATGGATCTTTCCTTAGGTTTCAGCTCTGTTACTTCTTTCACAACAGGAAGAAAGGCACATGCTGGAGAGAGATGTCAATGCAGCTCTTCAAAGAAAAACAGAGGAGCTCCAGAGAAACTTATTACAGGTTTTATACCCTTCACCTTGGCTTCGAGATTTCCGAATATCATTTGAAAATGTCTCAAAGACTATATGTGCCTACAAGCCAACTATTATTTGGGATGAAAGTGATGGTGGGTTGATCCGATTCTGAAATGATAATGACATTGATTTCAGGTTACCCATGAAAAAGTTAAAGCACTAATGGAGCTGGCACAAGTAAAGCAAGAACTTCAACTACTTAAAGAGTATGTTTATGTCTGCATAGCAGCTTGAGACTGATTGTTGTTTTGTGTTTGATTCTCATGACAATGTACCATAGTGGATAGCTTCTTTGAAACAAGGAGCTGGGTCCAGTAAATACAATTTGTGACTGCAACTGCTTTTTCGTATTTTTCCCTCAAAATGATTTGAACACCTTTTAACTAGAGTGATTAATATTATGGATATGGATAGTAAAATTGACCCACATGATACGTGCTTGTGCAAGGAAAAGTGTTCATGACTTGAAACGAGGAGTTGACACTGTAGAAAGGAAAATTGTTACTCACGAGAGAGAGGGGAGACTAAAAGGCTTGCTGAAGGGTACATATCTGAGACGTTGGGTAGGTACACCAGAAATCAGTGGAAGTGAAGCTGCAGCTCACTTGGATAATGAAGAAAATTACACTTCTCGGAAGTCTGCTGTGGAATTTGCCAGGTTAGTTAACATTTATGGTGTTCTTTAGAATTGTAGGATTGTGACTCATGTACGTATGGGTATTGCATGAGATATTCAATGGCATCAACTCATGTATGAAAGGCTCGATTATTTTGATTTTGTTTGCAGAATGAAAATTGAGAATGCAACTCTCAGAGAAAGTATTGAAAGCATGGAGCAACTGACTTCTTCAATTCACAGGCTTCGCCTCTCTCTTCTAAAGGTGGTTACCTTCACAACTCCATTTATATAGTTAAAACACGTTAACTGTCTTTTAATAGTTTAATTTTCATGTAAGAGGGGTTTCTGATCTGGCAGCTACTGCTTGATTCTTGAAGTTGAGCTTTGTTGGTCTCTCTTTATGGTTTATATTTCATCATCCATGTGATTTTCTAGGCGTCTTTCTTATTATGAATAGCTCATCACCATTTATATTTAGCACTAATGATTTGGCAACATTTTTTCAAGTAACATTTTATTACTCAGGTTAAGGTTAAATTACAAATTTAGTCTTTGAATGAGTTTGTGTCTATTTGGTTTTTGTCTACTAGTCTTTGAAAAGTATCTAGTAGGTCGTTGAACTTTCAGGTTTGTGTTTAAGTCTATGAACTCTAAAAAGTGTCTAATAGGTTCTTGACATATTGGACGTTTTTAAAAATCTATGAAAGCTTCTAGACACAAAGTTAAAAGTTTAGGGTCCAACTGAAATCTTAGGGATGTATTTACATTGTGACCTATTAGACAAAAATTGAAAGTTCAGATACCTATTAGACACTTTTTAAAGTTCAGAAACCATTTAGACACAATTTTGAAAGTTCAAAAACTAAACTTGTTATTTTTTAACCCTCGAGTTGAATTATAAATATTTAGTTTTGGTAGCATAATTAGTTTTTTGTAACTTTGAACTTTTCTTTTTAATATTACTAAAAACGAATACCTAATTGTAACCAACATGAGAGTGAGACATAGACCATATCCATATAGATTGATCTACTTCAATTATCTGATTACATCTTCGAAATTTTGATACTAATGTCCCTGCTACTAATACATTTGACTATTTAAAAGTTGACCTGTGAGTCTGACACAAATGAGTGATGATTTGGTGCAATATACCATGTGGGAGAAATAATGGCAAGGTAAAAATTGATGGGGTAGGCTGGTAGAATACATTTCAAACTCCTACTTTAATGACATGTACCTGGGACCACTCAGTTGCTATGTTACACCAAATCATCAAGAGCATGTCACATCAACATTTAAACAGCATGAACAATAGGGTTTTGTTAGAATTCTTTTCCAAAAAAAAAAAAAAGAGTACCTGTTAGAATAAAAGTTAGAAATTCAGAGATTTAGTTGAGACTTTCGACTAAACAGACAAACTTTAAAAGTTTAGGGATTAAATTTGTAATTTGGTAATGGTCTATCGTAATAATATTTGCTTATTGCATCATTTGAGTTACTAGAAGGACATCAAAATCACTTATTATGGGGATCAAGTTGTGACAATTATAACTATTGTCAATTTGCAGGCTAAAGAGTCTATTACTTCTGAAGGTCCAGCTACAAGTGTGTTGGAAGCTCTTAAGGGCATAATCAATGAGGCAAAACTCATAAAGACTGCACTTAGCAGCTCCTTACCAATTAGTTGGTCAGCTGAGGTAAATACTGGATCCAGTGAGGAAAGTTTACATGATTCATGTGATGTTTTAGGAGAAGACTCTAACCTGGGAAAGATAGATTTTGTTTCTGCTGCTGGTTTTGAGATGGTTGAGCTCCTTGTTTCTGTTGCTGAGTTGTTGTTAAAGGATTACATGGCTGATAGTGGTTCTTGATATGAAACTGATTGTTCAACTCTTATCTACTTTGGCCTTGGATTCTGGCATGGTTATGAATGTGATGCTCTGCAAATTGATGGATGAGCAAATGATGGAGTGAGGGGGATTTGTACCATAGGAAAAATTATAACTGGAGAAAAGAAAATGAAAACATGTGCATTACTGTAGATTTGTTAGAATATACACAAACTGTAAATGCATGTATCCTTTAATCTATGGCTCGGATGAAATTGAGTTGTCGAATCCAATTTATTTGTTCCTAAACATTTGTACATTTTTGTTATGTTGATGTTGATAATTTGATTAGGTTGAGGTTGTGTTGTGTTGTTACAAAGATGTGAAAAACTGGTGTAGTCTGTTCAAATTTACATTTTGTCAATACAAGGTCTTTTATTCGTT

mRNA sequence

ATGAAGAAAACGGTGGACAATCTTCAAAATAAGCTACGGATGGGTGTGGAAATTGAAAAGCATTTAAAGCTGAAAGTGCATGATTTGGAATTGAAGTTGGGTCAGGCGAGTTGTCCTGTGAGATTAGTCGAGGTGCGCATTCGCATGGATGATATGGTCAAGAGCAAGATTTCAGGGTTTTGTCAATACTATTCTCAATATCGAGATCATATATTGAATTTATTGGACAAAGAAACGTCTAATATGAATTCAACAATAGGAGAGATTGAAGAAAAGATTATGCAATATGGCTGGGGTGTTCAAAATTTGAAGGATTCTGAGAAAGTGCTGAAACCAGACCATGATTCCCAGGATGAGCATTTGAGTACCAATGCCAAGATGAAAATTCCTGGCTTACAAGATTCCATTGCTGATGGAAATGTCGAGGCCTCTGAAGCCCTCGCTTTGGCACTTCAAGAAAAGGTTTCAGCTCTGTTACTTCTTTCACAACAGGAAGAAAGGCACATGCTGGAGAGAGATGTCAATGCAGCTCTTCAAAGAAAAACAGAGGAGCTCCAGAGAAACTTATTACAGGTTACCCATGAAAAAGTTAAAGCACTAATGGAGCTGGCACAAGTAAAGCAAGAACTTCAACTACTTAAAGAGAAAAGTGTTCATGACTTGAAACGAGGAGTTGACACTGTAGAAAGGAAAATTGTTACTCACGAGAGAGAGGGGAGACTAAAAGGCTTGCTGAAGGGTACATATCTGAGACGTTGGGTAGGTACACCAGAAATCAGTGGAAGTGAAGCTGCAGCTCACTTGGATAATGAAGAAAATTACACTTCTCGGAAGTCTGCTGTGGAATTTGCCAGAATGAAAATTGAGAATGCAACTCTCAGAGAAAGTATTGAAAGCATGGAGCAACTGACTTCTTCAATTCACAGGCTTCGCCTCTCTCTTCTAAAGGCTAAAGAGTCTATTACTTCTGAAGGTCCAGCTACAAGTGTGTTGGAAGCTCTTAAGGGCATAATCAATGAGGCAAAACTCATAAAGACTGCACTTAGCAGCTCCTTACCAATTAGTTGGTCAGCTGAGGTAAATACTGGATCCAGTGAGGAAAGTTTACATGATTCATGTGATGTTTTAGGAGAAGACTCTAACCTGGGAAAGATAGATTTTGTTTCTGCTGCTGGTTTTGAGATGGTTGAGCTCCTTGTTTCTGTTGCTGAGTTGTTGTTAAAGGATTACATGGCTGATAGTGGTTCTTGATATGAAACTGATTGTTCAACTCTTATCTACTTTGGCCTTGGATTCTGGCATGGTTATGAATGTGATGCTCTGCAAATTGATGGATGAGCAAATGATGGAGTGAGGGGGATTTGTACCATAGGAAAAATTATAACTGGAGAAAAGAAAATGAAAACATGTGCATTACTGTAGATTTGTTAGAATATACACAAACTGTAAATGCATGTATCCTTTAATCTATGGCTCGGATGAAATTGAGTTGTCGAATCCAATTTATTTGTTCCTAAACATTTGTACATTTTTGTTATGTTGATGTTGATAATTTGATTAGGTTGAGGTTGTGTTGTGTTGTTACAAAGATGTGAAAAACTGGTGTAGTCTGTTCAAATTTACATTTTGTCAATACAAGGTCTTTTATTCGTT

Coding sequence (CDS)

ATGAAGAAAACGGTGGACAATCTTCAAAATAAGCTACGGATGGGTGTGGAAATTGAAAAGCATTTAAAGCTGAAAGTGCATGATTTGGAATTGAAGTTGGGTCAGGCGAGTTGTCCTGTGAGATTAGTCGAGGTGCGCATTCGCATGGATGATATGGTCAAGAGCAAGATTTCAGGGTTTTGTCAATACTATTCTCAATATCGAGATCATATATTGAATTTATTGGACAAAGAAACGTCTAATATGAATTCAACAATAGGAGAGATTGAAGAAAAGATTATGCAATATGGCTGGGGTGTTCAAAATTTGAAGGATTCTGAGAAAGTGCTGAAACCAGACCATGATTCCCAGGATGAGCATTTGAGTACCAATGCCAAGATGAAAATTCCTGGCTTACAAGATTCCATTGCTGATGGAAATGTCGAGGCCTCTGAAGCCCTCGCTTTGGCACTTCAAGAAAAGGTTTCAGCTCTGTTACTTCTTTCACAACAGGAAGAAAGGCACATGCTGGAGAGAGATGTCAATGCAGCTCTTCAAAGAAAAACAGAGGAGCTCCAGAGAAACTTATTACAGGTTACCCATGAAAAAGTTAAAGCACTAATGGAGCTGGCACAAGTAAAGCAAGAACTTCAACTACTTAAAGAGAAAAGTGTTCATGACTTGAAACGAGGAGTTGACACTGTAGAAAGGAAAATTGTTACTCACGAGAGAGAGGGGAGACTAAAAGGCTTGCTGAAGGGTACATATCTGAGACGTTGGGTAGGTACACCAGAAATCAGTGGAAGTGAAGCTGCAGCTCACTTGGATAATGAAGAAAATTACACTTCTCGGAAGTCTGCTGTGGAATTTGCCAGAATGAAAATTGAGAATGCAACTCTCAGAGAAAGTATTGAAAGCATGGAGCAACTGACTTCTTCAATTCACAGGCTTCGCCTCTCTCTTCTAAAGGCTAAAGAGTCTATTACTTCTGAAGGTCCAGCTACAAGTGTGTTGGAAGCTCTTAAGGGCATAATCAATGAGGCAAAACTCATAAAGACTGCACTTAGCAGCTCCTTACCAATTAGTTGGTCAGCTGAGGTAAATACTGGATCCAGTGAGGAAAGTTTACATGATTCATGTGATGTTTTAGGAGAAGACTCTAACCTGGGAAAGATAGATTTTGTTTCTGCTGCTGGTTTTGAGATGGTTGAGCTCCTTGTTTCTGTTGCTGAGTTGTTGTTAAAGGATTACATGGCTGATAGTGGTTCTTGA

Protein sequence

MKKTVDNLQNKLRMGVEIEKHLKLKVHDLELKLGQASCPVRLVEVRIRMDDMVKSKISGFCQYYSQYRDHILNLLDKETSNMNSTIGEIEEKIMQYGWGVQNLKDSEKVLKPDHDSQDEHLSTNAKMKIPGLQDSIADGNVEASEALALALQEKVSALLLLSQQEERHMLERDVNAALQRKTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKSVHDLKRGVDTVERKIVTHEREGRLKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENYTSRKSAVEFARMKIENATLRESIESMEQLTSSIHRLRLSLLKAKESITSEGPATSVLEALKGIINEAKLIKTALSSSLPISWSAEVNTGSSEESLHDSCDVLGEDSNLGKIDFVSAAGFEMVELLVSVAELLLKDYMADSGS

Homology

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BLAST of Lsi03G005840 vs. TrEMBL
Match: A0A0A0K4E9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071330 PE=4 SV=1)

HSP 1 Score: 657.5 bits (1695), Expect = 1.1e-185
Identity = 364/417 (87.29%), Postives = 382/417 (91.61%), Query Frame = 1


Query: 1   MKKTVDNLQNKLRMGVEIEKHLKLKVHDLELKLGQASCPVRLVEVRIRMDDMVKSKISGF 60
           MKKTVDNLQNKLRMGVEIEKHLK KVHDLELKL             I MDDMVKSKISGF
Sbjct: 241 MKKTVDNLQNKLRMGVEIEKHLKGKVHDLELKL-------------IHMDDMVKSKISGF 300

Query: 61  CQYYSQYRDHILNLLDKETSNMNSTIGEIEEKIMQYGWGVQNLKDSEKVLKPDHDSQDEH 120
           CQ YSQYRDHILNLL+KE SNM+STIGEIEEKI+QYGWGVQ LKDSEKVLK ++DSQ+ H
Sbjct: 301 CQNYSQYRDHILNLLEKEMSNMHSTIGEIEEKIVQYGWGVQQLKDSEKVLKEENDSQEGH 360

Query: 121 LSTNAKMKIPGLQDSIADGNVEASEALALALQEKVSALLLLSQQEERHMLERDVNAALQR 180
           LSTNAKM+I GL DS+ADGN   +EALALALQEKVSALLLLSQQEERHMLERDVNAALQR
Sbjct: 361 LSTNAKMEIHGLPDSVADGN---AEALALALQEKVSALLLLSQQEERHMLERDVNAALQR 420

Query: 181 KTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKSVHDLKRGVDTVERKIVTHEREGR 240
           KTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKSVHDLKRG DTVERK+VTHEREG+
Sbjct: 421 KTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKSVHDLKRGADTVERKLVTHEREGK 480

Query: 241 LKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENYTSRKSAVEFARMKIENATLRESIESM 300
           LKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENY+SRKSAV+FAR+KIENATLRESIESM
Sbjct: 481 LKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENYSSRKSAVDFARIKIENATLRESIESM 540

Query: 301 EQLTSSIHRLRLSLLKAKESITSEGPATSVLEALKGIINEAKLIKTALSSSLPISWSAEV 360
           EQLTSSIHRLRL LLKAKES TSEGP TSVLE LKGIINEAKLIKTAL SSLPISWSAEV
Sbjct: 541 EQLTSSIHRLRLYLLKAKESATSEGPGTSVLEGLKGIINEAKLIKTALCSSLPISWSAEV 600

Query: 361 NTGSSEESLHDSCDVLGE-DSNLGKIDFVSAAGFEMVELLVSVAELLLKDYMADSGS 417
           N GSSEE+LHDS DVLGE DS+LGKIDFVSAAGFEMVELLVSVAELL+KDY A+SGS
Sbjct: 601 NAGSSEETLHDSHDVLGEGDSSLGKIDFVSAAGFEMVELLVSVAELLIKDYKAESGS 641

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BLAST of Lsi03G005840 vs. TrEMBL
Match: D7SXN9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g01020 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 9.5e-102
Identity = 232/429 (54.08%), Postives = 308/429 (71.79%), Query Frame = 1


Query: 1   MKKTVDNLQNKLRMGVEIEKHLKLKVHDLELKLGQASCPVRLVEVRIRMDDMVKSKISGF 60
           ++ +VDNLQNKLR+G+EIE HLK KV +LE +             +I    M K++ISG 
Sbjct: 244 VRNSVDNLQNKLRVGLEIENHLKKKVSELEKQ-------------KIISHQMFKNRISGL 303

Query: 61  CQYYSQYRDHILNLLDKETSNMNSTIGEIEEKIMQYGWG-VQNLKDSEKVLKP-DHDSQD 120
             Y+SQ+R H++NLLD+  S++ S I  +EEKI Q      QNL+  ++ LK  +++ +D
Sbjct: 304 LHYHSQHRLHVVNLLDEGKSHLKSIIDVVEEKIRQLDADREQNLEPPQRDLKLYENECRD 363

Query: 121 EHLS------TNAKMKIPGLQDSIADGNVEASEALALALQEKVSALLLLSQQEERHMLER 180
            H+S      + A+  IPGL++++ DG  +ASEA A A+QEKV+ALLLLSQQEERH+LE 
Sbjct: 364 VHVSIVGDHNSVAESNIPGLKNNVIDGMGDASEAFAQAMQEKVAALLLLSQQEERHLLES 423

Query: 181 DVNAALQRKTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKSVHDLKRG---VDTVE 240
           +VN  LQ+K EELQRNLLQVT+EKVKALMELAQ+KQE QLL+EK  HD+K+G    D  E
Sbjct: 424 NVNIVLQKKMEELQRNLLQVTNEKVKALMELAQLKQEYQLLQEKISHDMKQGNFLADIGE 483

Query: 241 RKIVTHEREGRLKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENYTSRKS--AVEFARMK 300
           ++  T ER+G+LK LLK TYLRRW+G  + SG++A AHL++E N++ RKS  +++FARMK
Sbjct: 484 KRNATLERDGKLKNLLKKTYLRRWIGALDYSGNQAEAHLNSEGNFSGRKSNYSMDFARMK 543

Query: 301 IENATLRESIESMEQLTSSIHRLRLSLLKAKESITSEGPATSVLEALKGIINEAKLIKTA 360
           IENATL+ES+ES+E LTSSI RLRL+LL+AKES+TS G  +SVLEAL  IINEAKL+KTA
Sbjct: 544 IENATLKESMESIEHLTSSIRRLRLTLLEAKESVTSGGTVSSVLEALDDIINEAKLVKTA 603

Query: 361 LSSSLPISWSAEVNTGSSEESLHDSCDVLGEDSNLGKIDFVSAAGFEMVELLVSVAELLL 417
           L SSLP+SWSAE +  S  ES+ ++      DS+  KID V AAGFEMVELL+   ++L 
Sbjct: 604 LGSSLPVSWSAEADGESFGESMDNAPGCFHGDSSSEKIDSVCAAGFEMVELLIFAVQVLK 659

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BLAST of Lsi03G005840 vs. TrEMBL
Match: B9T2F7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0834990 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 2.2e-98
Identity = 224/418 (53.59%), Postives = 297/418 (71.05%), Query Frame = 1


Query: 1   MKKTVDNLQNKLRMGVEIEKHLKLKVHDLELKLGQASCPVRLVEVRIRMDDMVKSKISGF 60
           ++K+ DNLQ+KLR+G+EIE HLK +V +LE K             +I++D MV + I+G 
Sbjct: 241 VRKSADNLQSKLRVGLEIENHLKKQVRELEKK-------------QIQLDKMVMNGIAGL 300

Query: 61  CQYYSQYRDHILNLLDKETSNMNSTIGEIEEKIMQ-YGWGVQNLKDSEKVLK-PDHDSQD 120
             Y+S++R HI+NLL++   +M ST+  +EEKI + YG   QNL+ S++V+   +++ +D
Sbjct: 301 RHYHSEHRGHIMNLLNEGKLHMKSTMDMLEEKIGETYGSKEQNLRPSQRVIDLEENECRD 360

Query: 121 EHLSTNAKMKI------PGLQDSIADGNVEASEALALALQEKVSALLLLSQQEERHMLER 180
            H+S +    +       GL DS  +    +SEALA  LQEKV+ALLLLSQQEERH+LER
Sbjct: 361 VHISNDIGSALISEEVKHGLHDSGDNEEENSSEALAQVLQEKVAALLLLSQQEERHLLER 420

Query: 181 DVNAALQRKTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKSVHDLKRG---VDTVE 240
           +VNA LQ+K EELQRNLLQVT+EKVKAL+ELAQ+KQ  Q L EK  H ++ G   +D VE
Sbjct: 421 NVNAVLQKKMEELQRNLLQVTNEKVKALVELAQLKQAYQQLHEKISHGIQEGNLSIDKVE 480

Query: 241 RKIVTHEREGRLKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENYTSRK-SAVEFARMKI 300
           R+  TH+++GRL+ LLK TYL+RW+GT  I  +E  AHL+NE N++SR  S+++FARMKI
Sbjct: 481 RRHFTHDKDGRLRNLLKRTYLKRWMGTSGIGVNEEEAHLNNEGNFSSRTHSSIDFARMKI 540

Query: 301 ENATLRESIESMEQLTSSIHRLRLSLLKAKESITSEGPATSVLEALKGIINEAKLIKTAL 360
           ENATL+ES+ESME LTSSIHRLR +LLK KES   EG    VLEAL  I++EAKL+KTA 
Sbjct: 541 ENATLKESMESMEHLTSSIHRLRCALLKVKESAACEGTCVGVLEALHDIVSEAKLLKTAF 600

Query: 361 SSSLPISWSAEVNTGSSEESLHDSCDVLGEDSNLGKIDFVSAAGFEMVELLVSVAELL 407
            SSLPISWSAE    S+  S H+    L EDS+  K+D VSAAGFEMVELL+  A++L
Sbjct: 601 GSSLPISWSAEAVDTSTGGSTHNEPGDLDEDSSYEKMDSVSAAGFEMVELLILAAQIL 645

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BLAST of Lsi03G005840 vs. TrEMBL
Match: G7JZT3_MEDTR (Myosin heavy chain-like protein OS=Medicago truncatula GN=MTR_5g005010 PE=4 SV=2)

HSP 1 Score: 338.6 bits (867), Expect = 1.1e-89
Identity = 211/415 (50.84%), Postives = 288/415 (69.40%), Query Frame = 1


Query: 1   MKKTVDNLQNKLRMGVEIEKHLKLKVHDLELKLGQASCPVRLVEVRIRMDDMVKSKISGF 60
           +  +VD LQ+KLR+G+EIE HLK +++ +E             + +I M+ ++++ I+  
Sbjct: 245 VNNSVDCLQSKLRVGLEIENHLKKRINLME-------------QNQIYMNKVIENGIADL 304

Query: 61  CQYYSQYRDHILNLLDKETSNMNSTIGEIEEKIMQYGWGVQ-NLKDSEKVLKPDHDSQDE 120
             ++ +YRDHI+NLL    S + STI  I+E+I ++   ++ NL       + +++ +D 
Sbjct: 305 KHHHFKYRDHIMNLLRDGESTIKSTINVIDERIRRFNENIEPNLVHQRDKEREENECRDA 364

Query: 121 HLS----TNAKMKIPGLQDSIA---DGNVEASEALALALQEKVSALLLLSQQEERHMLER 180
           H+S    T ++ K  GL DS+A   DG  ++S+ALA+AL EKV ALLLLSQQEERH+LER
Sbjct: 365 HISPQDKTLSQSKSTGL-DSLAVKADGQCDSSDALAMALHEKVDALLLLSQQEERHLLER 424

Query: 181 DVNAALQRKTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKSVHDLKRGVDTVERKI 240
           +VN+ALQ KTEELQRNLLQVT+EKVKALMELAQ+KQE QLL EK   +  +GVD+ ERK+
Sbjct: 425 NVNSALQIKTEELQRNLLQVTNEKVKALMELAQLKQEHQLLLEKLDPETNQGVDSGERKL 484

Query: 241 VTHEREGRLKGLLKGTYLRRWVGTPEISGSEAAAHLDNE-ENYTSRKSAVEFARMKIENA 300
           V  ER+G LK LLK +YLRRW+G  + SG E  +  +NE + +  R S+V+FARMKIENA
Sbjct: 485 VIRERDGTLKNLLKKSYLRRWIGPLDASGKEVDSSPNNEGKFFNQRSSSVDFARMKIENA 544

Query: 301 TLRESIESMEQLTSSIHRLRLSLLKAKESITSEGPATSVLEALKGIINEAKLIKTALSSS 360
           TL+ES++ ME LTSS+HRLRLSL K KES+TSEG  + V E L G INEAKL++TAL SS
Sbjct: 545 TLKESMDCMEHLTSSVHRLRLSLWKVKESVTSEGTVSGVSEVLNGAINEAKLLRTALGSS 604

Query: 361 LPISWSAEVNTGSSEESLHDSCDVLGEDSNLGKIDFVSAAGFEMVELLVSVAELL 407
           LPISWS E   G + +S     + + +  +  KID VSAAG EMVELL+  A++L
Sbjct: 605 LPISWSVETEVGYTGDS--KGVETVHQQCSDEKIDTVSAAGLEMVELLIFAAQML 643

[Close]

BLAST of Lsi03G005840 vs. TrEMBL
Match: A0A061E2B5_THECC (Myosin heavy chain-related protein, putative isoform 3 OS=Theobroma cacao GN=TCM_007240 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.9e-89
Identity = 211/414 (50.97%), Postives = 288/414 (69.57%), Query Frame = 1


Query: 1   MKKTVDNLQNKLRMGVEIEKHLKLKVHDLELKLGQASCPVRLVEVRIRMDDMVKSKISGF 60
           ++ +VD+L+NKLR+G+EIE HLK KVH+L  K             +I  D M+ ++++  
Sbjct: 220 VRSSVDDLRNKLRVGLEIENHLKKKVHELGRK-------------KISSDKMILNRVTEL 279

Query: 61  CQYYSQYRDHILNLLDKETSNMNSTIGEIEEKIMQYGWGVQNLKDSEKVLKPDH-DSQDE 120
             Y+SQ+R  I+NLLD E S++   +  +EEK  Q+    QN++     LKP   +  D 
Sbjct: 280 RHYHSQHRTEIMNLLDMERSHIKRFVDVVEEKFRQFDAKGQNVQSD---LKPGECECGDV 339

Query: 121 HLSTNAKMKIPGLQD----SIADGNVEASEALALALQEKVSALLLLSQQEERHMLERDVN 180
           ++ST+A+      +D    +IA+   ++SEALA ALQEKV+ALLLLSQQEERH+LER+V+
Sbjct: 340 YMSTDAEAGSVSERDMVDLNIAERKGDSSEALAQALQEKVAALLLLSQQEERHLLERNVH 399

Query: 181 AALQRKTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKSVHDLKRG---VDTVERKI 240
           AALQ+K EELQRNLLQVT+EKVKAL+ELAQ+K++ QLL+EK  +++K+G    +   R+I
Sbjct: 400 AALQKKIEELQRNLLQVTNEKVKALLELAQLKRKYQLLQEKISNEMKQGNVLAEVANRRI 459

Query: 241 VTHEREGRLKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENYTSRKSAVEFARMKIENAT 300
           +T ER+GRL+ LLK TYLRRWVG  +  GSEA A          + S+++FARM+IENAT
Sbjct: 460 ITSERDGRLRNLLKKTYLRRWVGAIDARGSEAEA----------QPSSMDFARMRIENAT 519

Query: 301 LRESIESMEQLTSSIHRLRLSLLKAKESITSEGPATSVLEALKGIINEAKLIKTALSSSL 360
           LRES+ S+E LTS++HRLRLSLLK  ESITSEG  +S  EAL  I+ EAKL+KTAL SSL
Sbjct: 520 LRESMGSLEHLTSAVHRLRLSLLKVTESITSEGTDSSSSEALDEIVTEAKLVKTALGSSL 579

Query: 361 PISWSAEVNTGSSEESLHDSCDVLGEDSNLGKIDFVSAAGFEMVELLVSVAELL 407
           P+SWSAE +     E+       + EDS++ KID VSAAGFEMV+LL+  A++L
Sbjct: 580 PVSWSAEGDGELIGENAGSEVGNIFEDSSIEKIDSVSAAGFEMVDLLILAAQIL 607

[Close]

BLAST of Lsi03G005840 vs. TAIR10
Match: AT2G14680.2 (AT2G14680.2 myosin heavy chain-related)

HSP 1 Score: 256.1 bits (653), Expect = 3.6e-68
Identity = 183/441 (41.50%), Postives = 261/441 (59.18%), Query Frame = 1


Query: 1   MKKTVDNLQNKLRMGVEIEKHLKLKVHDLELKLGQASCPVRLVEVRIRMDDMVKSKISGF 60
           +K TVDNLQ+KLR+G+EIE HLK +V  LE K              I  D ++ + I+  
Sbjct: 241 VKNTVDNLQSKLRVGLEIENHLKKRVRALEKK-------------NIVADGLIVNGITDI 300

Query: 61  CQYYSQYRDHILNLLDKETSNMNSTIGEIEEKIMQYGWGVQNLKDSEKVLKPDH-DSQDE 120
             ++SQ R +I+ LL++E   + S    +EEK+  +   VQN+   +  LKPD  + +D 
Sbjct: 301 RHHHSQLRAYIIALLNEEGLYIKSISKNVEEKLKLHSSEVQNVVPPQHDLKPDESECRDV 360

Query: 121 HLSTNA------KMKIPGLQDSIADGNVEASEALALALQEKVSALLLLSQQEERHMLERD 180
           H++T        K+    +   +A+   +ASEA A ALQEKV ALLLLSQQEERH+ E +
Sbjct: 361 HMTTVVESCQVTKLAEASIAKIMAESRGDASEAFAQALQEKVGALLLLSQQEERHLHEEN 420

Query: 181 VNAALQRKTEELQRNLLQVTHEKVKALMELAQVKQELQLLKE------------------ 240
           VNAALQ+K +ELQRN+LQVT+EKV+ LMELAQ++QE Q L+E                  
Sbjct: 421 VNAALQQKVDELQRNILQVTNEKVRTLMELAQLRQEYQSLREHGTFCKWCKPSFKTNFAL 480

Query: 241 KSVHDLKRGVDTVE------RKIVTHEREGRLKGLLKGTYLRRWVGTPEISGSEAAAHLD 300
            SV +   G    E      R ++++E++GRLK + K +Y+ RW+      GS    HL+
Sbjct: 481 SSVLNKMSGTREEESTGNSGRIVISNEKDGRLKNMWKKSYINRWIDPSSRGGS----HLN 540

Query: 301 NEENYTSRKSAVEFARMKIENATLRESIESMEQLTSSIHRLRLSLLKAKESITSEGPATS 360
            E +Y S    +E++RMK+E A ++E++ESM  LT+SI RLRL+LLK KE   +E  A S
Sbjct: 541 TEADYASN---IEYSRMKVEYAAIKENLESMGHLTTSIRRLRLALLKVKELNDTETTARS 600

Query: 361 VLEALKGIINEAKLIKTALSSSLPISWSAEVNTGSSEESLHDSCDVLGEDSNLGKIDFVS 411
              A+  I+ EA  +KTAL  S+PISWSAE    S  ES+ D       +S+  + D VS
Sbjct: 601 CEVAIANILVEATHLKTALGISIPISWSAE----SDIESVTDG------ESSCERTDSVS 651

[Close]

BLAST of Lsi03G005840 vs. NCBI nr
Match: gi|659110087|ref|XP_008455041.1| (PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 667.2 bits (1720), Expect = 1.9e-188
Identity = 365/417 (87.53%), Postives = 386/417 (92.57%), Query Frame = 1


Query: 1   MKKTVDNLQNKLRMGVEIEKHLKLKVHDLELKLGQASCPVRLVEVRIRMDDMVKSKISGF 60
           MKKT+DNLQNKLRMGVEIEKHLK KVHDLELKL             IRMDD+VKSKISGF
Sbjct: 241 MKKTMDNLQNKLRMGVEIEKHLKQKVHDLELKL-------------IRMDDIVKSKISGF 300

Query: 61  CQYYSQYRDHILNLLDKETSNMNSTIGEIEEKIMQYGWGVQNLKDSEKVLKPDHDSQDEH 120
           CQYYSQYR++I NLLDKE SNM+STIGEIEEKIMQYGWGVQ LKDSEKVLK ++DSQD H
Sbjct: 301 CQYYSQYRNYISNLLDKEMSNMHSTIGEIEEKIMQYGWGVQKLKDSEKVLKEENDSQDGH 360

Query: 121 LSTNAKMKIPGLQDSIADGNVEASEALALALQEKVSALLLLSQQEERHMLERDVNAALQR 180
           LSTNAKM+I GL DS+ADGN EASEALALALQEKVSALLLLSQQEERHMLERDVNAALQR
Sbjct: 361 LSTNAKMEIHGLPDSVADGNSEASEALALALQEKVSALLLLSQQEERHMLERDVNAALQR 420

Query: 181 KTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKSVHDLKRGVDTVERKIVTHEREGR 240
           KTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKS HDLKRG DTVERKIVTHEREG+
Sbjct: 421 KTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKSAHDLKRGADTVERKIVTHEREGK 480

Query: 241 LKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENYTSRKSAVEFARMKIENATLRESIESM 300
           LKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENY+SRKSAV+FAR+KIENATLRESIESM
Sbjct: 481 LKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENYSSRKSAVDFARIKIENATLRESIESM 540

Query: 301 EQLTSSIHRLRLSLLKAKESITSEGPATSVLEALKGIINEAKLIKTALSSSLPISWSAEV 360
           EQLTSSIHRLRLSLLKAKES+T EGP TS+LEALKGIINEAKLIKTALSSSLPISWSAE 
Sbjct: 541 EQLTSSIHRLRLSLLKAKESVTLEGPGTSMLEALKGIINEAKLIKTALSSSLPISWSAEA 600

Query: 361 NTGSSEESLHDSCDVLGE-DSNLGKIDFVSAAGFEMVELLVSVAELLLKDYMADSGS 417
           N GSSEE+LHDS DVLG+ D++LGKIDFVSAAGFEMVELLVSVAELL+KDY A+SGS
Sbjct: 601 NAGSSEETLHDSHDVLGQGDASLGKIDFVSAAGFEMVELLVSVAELLIKDYKAESGS 644

[Close]

BLAST of Lsi03G005840 vs. NCBI nr
Match: gi|659110095|ref|XP_008455046.1| (PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X4 [Cucumis melo])

HSP 1 Score: 667.2 bits (1720), Expect = 1.9e-188
Identity = 365/417 (87.53%), Postives = 386/417 (92.57%), Query Frame = 1


Query: 1   MKKTVDNLQNKLRMGVEIEKHLKLKVHDLELKLGQASCPVRLVEVRIRMDDMVKSKISGF 60
           MKKT+DNLQNKLRMGVEIEKHLK KVHDLELKL             IRMDD+VKSKISGF
Sbjct: 114 MKKTMDNLQNKLRMGVEIEKHLKQKVHDLELKL-------------IRMDDIVKSKISGF 173

Query: 61  CQYYSQYRDHILNLLDKETSNMNSTIGEIEEKIMQYGWGVQNLKDSEKVLKPDHDSQDEH 120
           CQYYSQYR++I NLLDKE SNM+STIGEIEEKIMQYGWGVQ LKDSEKVLK ++DSQD H
Sbjct: 174 CQYYSQYRNYISNLLDKEMSNMHSTIGEIEEKIMQYGWGVQKLKDSEKVLKEENDSQDGH 233

Query: 121 LSTNAKMKIPGLQDSIADGNVEASEALALALQEKVSALLLLSQQEERHMLERDVNAALQR 180
           LSTNAKM+I GL DS+ADGN EASEALALALQEKVSALLLLSQQEERHMLERDVNAALQR
Sbjct: 234 LSTNAKMEIHGLPDSVADGNSEASEALALALQEKVSALLLLSQQEERHMLERDVNAALQR 293

Query: 181 KTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKSVHDLKRGVDTVERKIVTHEREGR 240
           KTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKS HDLKRG DTVERKIVTHEREG+
Sbjct: 294 KTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKSAHDLKRGADTVERKIVTHEREGK 353

Query: 241 LKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENYTSRKSAVEFARMKIENATLRESIESM 300
           LKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENY+SRKSAV+FAR+KIENATLRESIESM
Sbjct: 354 LKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENYSSRKSAVDFARIKIENATLRESIESM 413

Query: 301 EQLTSSIHRLRLSLLKAKESITSEGPATSVLEALKGIINEAKLIKTALSSSLPISWSAEV 360
           EQLTSSIHRLRLSLLKAKES+T EGP TS+LEALKGIINEAKLIKTALSSSLPISWSAE 
Sbjct: 414 EQLTSSIHRLRLSLLKAKESVTLEGPGTSMLEALKGIINEAKLIKTALSSSLPISWSAEA 473

Query: 361 NTGSSEESLHDSCDVLGE-DSNLGKIDFVSAAGFEMVELLVSVAELLLKDYMADSGS 417
           N GSSEE+LHDS DVLG+ D++LGKIDFVSAAGFEMVELLVSVAELL+KDY A+SGS
Sbjct: 474 NAGSSEETLHDSHDVLGQGDASLGKIDFVSAAGFEMVELLVSVAELLIKDYKAESGS 517

[Close]

BLAST of Lsi03G005840 vs. NCBI nr
Match: gi|659110091|ref|XP_008455043.1| (PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 657.9 bits (1696), Expect = 1.2e-185
Identity = 362/417 (86.81%), Postives = 384/417 (92.09%), Query Frame = 1


Query: 1   MKKTVDNLQNKLRMGVEIEKHLKLKVHDLELKLGQASCPVRLVEVRIRMDDMVKSKISGF 60
           MKKT+DNLQNKLRMGVEIEKHLK KVHDLELKL             IRMDD+VKSKISGF
Sbjct: 241 MKKTMDNLQNKLRMGVEIEKHLKQKVHDLELKL-------------IRMDDIVKSKISGF 300

Query: 61  CQYYSQYRDHILNLLDKETSNMNSTIGEIEEKIMQYGWGVQNLKDSEKVLKPDHDSQDEH 120
           CQYYSQYR++I NLLDKE SNM+STIGEIEEKIMQYGWGVQ LKDSEKVLK ++DSQD H
Sbjct: 301 CQYYSQYRNYISNLLDKEMSNMHSTIGEIEEKIMQYGWGVQKLKDSEKVLKEENDSQDGH 360

Query: 121 LSTNAKMKIPGLQDSIADGNVEASEALALALQEKVSALLLLSQQEERHMLERDVNAALQR 180
           LSTNAKM+I GL DS+ADGN EASEALALALQEKVSALLLLSQQEERHMLERDVNAALQR
Sbjct: 361 LSTNAKMEIHGLPDSVADGNSEASEALALALQEKVSALLLLSQQEERHMLERDVNAALQR 420

Query: 181 KTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKSVHDLKRGVDTVERKIVTHEREGR 240
           KTEELQRNLLQVTHEKVKALMELAQVKQELQLLK+   HDLKRG DTVERKIVTHEREG+
Sbjct: 421 KTEELQRNLLQVTHEKVKALMELAQVKQELQLLKD--AHDLKRGADTVERKIVTHEREGK 480

Query: 241 LKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENYTSRKSAVEFARMKIENATLRESIESM 300
           LKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENY+SRKSAV+FAR+KIENATLRESIESM
Sbjct: 481 LKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENYSSRKSAVDFARIKIENATLRESIESM 540

Query: 301 EQLTSSIHRLRLSLLKAKESITSEGPATSVLEALKGIINEAKLIKTALSSSLPISWSAEV 360
           EQLTSSIHRLRLSLLKAKES+T EGP TS+LEALKGIINEAKLIKTALSSSLPISWSAE 
Sbjct: 541 EQLTSSIHRLRLSLLKAKESVTLEGPGTSMLEALKGIINEAKLIKTALSSSLPISWSAEA 600

Query: 361 NTGSSEESLHDSCDVLGE-DSNLGKIDFVSAAGFEMVELLVSVAELLLKDYMADSGS 417
           N GSSEE+LHDS DVLG+ D++LGKIDFVSAAGFEMVELLVSVAELL+KDY A+SGS
Sbjct: 601 NAGSSEETLHDSHDVLGQGDASLGKIDFVSAAGFEMVELLVSVAELLIKDYKAESGS 642

[Close]

BLAST of Lsi03G005840 vs. NCBI nr
Match: gi|449438615|ref|XP_004137083.1| (PREDICTED: myosin-13 isoform X1 [Cucumis sativus])

HSP 1 Score: 657.5 bits (1695), Expect = 1.5e-185
Identity = 364/417 (87.29%), Postives = 382/417 (91.61%), Query Frame = 1


Query: 1   MKKTVDNLQNKLRMGVEIEKHLKLKVHDLELKLGQASCPVRLVEVRIRMDDMVKSKISGF 60
           MKKTVDNLQNKLRMGVEIEKHLK KVHDLELKL             I MDDMVKSKISGF
Sbjct: 241 MKKTVDNLQNKLRMGVEIEKHLKGKVHDLELKL-------------IHMDDMVKSKISGF 300

Query: 61  CQYYSQYRDHILNLLDKETSNMNSTIGEIEEKIMQYGWGVQNLKDSEKVLKPDHDSQDEH 120
           CQ YSQYRDHILNLL+KE SNM+STIGEIEEKI+QYGWGVQ LKDSEKVLK ++DSQ+ H
Sbjct: 301 CQNYSQYRDHILNLLEKEMSNMHSTIGEIEEKIVQYGWGVQQLKDSEKVLKEENDSQEGH 360

Query: 121 LSTNAKMKIPGLQDSIADGNVEASEALALALQEKVSALLLLSQQEERHMLERDVNAALQR 180
           LSTNAKM+I GL DS+ADGN   +EALALALQEKVSALLLLSQQEERHMLERDVNAALQR
Sbjct: 361 LSTNAKMEIHGLPDSVADGN---AEALALALQEKVSALLLLSQQEERHMLERDVNAALQR 420

Query: 181 KTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKSVHDLKRGVDTVERKIVTHEREGR 240
           KTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKSVHDLKRG DTVERK+VTHEREG+
Sbjct: 421 KTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKSVHDLKRGADTVERKLVTHEREGK 480

Query: 241 LKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENYTSRKSAVEFARMKIENATLRESIESM 300
           LKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENY+SRKSAV+FAR+KIENATLRESIESM
Sbjct: 481 LKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENYSSRKSAVDFARIKIENATLRESIESM 540

Query: 301 EQLTSSIHRLRLSLLKAKESITSEGPATSVLEALKGIINEAKLIKTALSSSLPISWSAEV 360
           EQLTSSIHRLRL LLKAKES TSEGP TSVLE LKGIINEAKLIKTAL SSLPISWSAEV
Sbjct: 541 EQLTSSIHRLRLYLLKAKESATSEGPGTSVLEGLKGIINEAKLIKTALCSSLPISWSAEV 600

Query: 361 NTGSSEESLHDSCDVLGE-DSNLGKIDFVSAAGFEMVELLVSVAELLLKDYMADSGS 417
           N GSSEE+LHDS DVLGE DS+LGKIDFVSAAGFEMVELLVSVAELL+KDY A+SGS
Sbjct: 601 NAGSSEETLHDSHDVLGEGDSSLGKIDFVSAAGFEMVELLVSVAELLIKDYKAESGS 641

[Close]

BLAST of Lsi03G005840 vs. NCBI nr
Match: gi|778724846|ref|XP_011658871.1| (PREDICTED: myosin-13 isoform X3 [Cucumis sativus])

HSP 1 Score: 657.5 bits (1695), Expect = 1.5e-185
Identity = 364/417 (87.29%), Postives = 382/417 (91.61%), Query Frame = 1


Query: 1   MKKTVDNLQNKLRMGVEIEKHLKLKVHDLELKLGQASCPVRLVEVRIRMDDMVKSKISGF 60
           MKKTVDNLQNKLRMGVEIEKHLK KVHDLELKL             I MDDMVKSKISGF
Sbjct: 114 MKKTVDNLQNKLRMGVEIEKHLKGKVHDLELKL-------------IHMDDMVKSKISGF 173

Query: 61  CQYYSQYRDHILNLLDKETSNMNSTIGEIEEKIMQYGWGVQNLKDSEKVLKPDHDSQDEH 120
           CQ YSQYRDHILNLL+KE SNM+STIGEIEEKI+QYGWGVQ LKDSEKVLK ++DSQ+ H
Sbjct: 174 CQNYSQYRDHILNLLEKEMSNMHSTIGEIEEKIVQYGWGVQQLKDSEKVLKEENDSQEGH 233

Query: 121 LSTNAKMKIPGLQDSIADGNVEASEALALALQEKVSALLLLSQQEERHMLERDVNAALQR 180
           LSTNAKM+I GL DS+ADGN   +EALALALQEKVSALLLLSQQEERHMLERDVNAALQR
Sbjct: 234 LSTNAKMEIHGLPDSVADGN---AEALALALQEKVSALLLLSQQEERHMLERDVNAALQR 293

Query: 181 KTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKSVHDLKRGVDTVERKIVTHEREGR 240
           KTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKSVHDLKRG DTVERK+VTHEREG+
Sbjct: 294 KTEELQRNLLQVTHEKVKALMELAQVKQELQLLKEKSVHDLKRGADTVERKLVTHEREGK 353

Query: 241 LKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENYTSRKSAVEFARMKIENATLRESIESM 300
           LKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENY+SRKSAV+FAR+KIENATLRESIESM
Sbjct: 354 LKGLLKGTYLRRWVGTPEISGSEAAAHLDNEENYSSRKSAVDFARIKIENATLRESIESM 413

Query: 301 EQLTSSIHRLRLSLLKAKESITSEGPATSVLEALKGIINEAKLIKTALSSSLPISWSAEV 360
           EQLTSSIHRLRL LLKAKES TSEGP TSVLE LKGIINEAKLIKTAL SSLPISWSAEV
Sbjct: 414 EQLTSSIHRLRLYLLKAKESATSEGPGTSVLEGLKGIINEAKLIKTALCSSLPISWSAEV 473

Query: 361 NTGSSEESLHDSCDVLGE-DSNLGKIDFVSAAGFEMVELLVSVAELLLKDYMADSGS 417
           N GSSEE+LHDS DVLGE DS+LGKIDFVSAAGFEMVELLVSVAELL+KDY A+SGS
Sbjct: 474 NAGSSEETLHDSHDVLGEGDSSLGKIDFVSAAGFEMVELLVSVAELLIKDYKAESGS 514

The following BLAST results are available for this feature:

BLAST of Lsi03G005840 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi03G005840 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4E9_CUCSA	1.1e-185	87.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071330 PE=4 SV=1	[more]
D7SXN9_VITVI	9.5e-102	54.08	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g01020 PE=4 SV=...	[more]
B9T2F7_RICCO	2.2e-98	53.59	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0834990 PE=4 SV=1	[more]
G7JZT3_MEDTR	1.1e-89	50.84	Myosin heavy chain-like protein OS=Medicago truncatula GN=MTR_5g005010 PE=4 SV=2	[more]
A0A061E2B5_THECC	1.9e-89	50.97	Myosin heavy chain-related protein, putative isoform 3 OS=Theobroma cacao GN=TCM...	[more]

BLAST of Lsi03G005840 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14680.2	3.6e-68	41.50	myosin heavy chain-related	[more]

BLAST of Lsi03G005840 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110087\|ref\|XP_008455041.1\|	1.9e-188	87.53	PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X1 [Cucumis melo]	[more]
gi\|659110095\|ref\|XP_008455046.1\|	1.9e-188	87.53	PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X4 [Cucumis melo]	[more]
gi\|659110091\|ref\|XP_008455043.1\|	1.2e-185	86.81	PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X2 [Cucumis melo]	[more]
gi\|449438615\|ref\|XP_004137083.1\|	1.5e-185	87.29	PREDICTED: myosin-13 isoform X1 [Cucumis sativus]	[more]
gi\|778724846\|ref\|XP_011658871.1\|	1.5e-185	87.29	PREDICTED: myosin-13 isoform X3 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0044699	single-organism process
biological_process	GO:0009793	embryo development ending in seed dormancy
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G005840.1	Lsi03G005840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 218..238 score: -coord: 283..303 score: -coord: 160..216 scor
None	No IPR available	PANTHER	PTHR35712	FAMILY NOT NAMED	coord: 1..413 score: 8.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi03G005840	Csa7G071330	Cucumber (Chinese Long) v2	culsiB522
Lsi03G005840	CSPI07G06800	Wild cucumber (PI 183967)	cpilsiB536
Lsi03G005840	Cucsa.219090	Cucumber (Gy14) v1	cgylsiB367
Lsi03G005840	CmaCh19G005450	Cucurbita maxima (Rimu)	cmalsiB484
Lsi03G005840	CmoCh19G005580	Cucurbita moschata (Rifu)	cmolsiB468
Lsi03G005840	Cla001609	Watermelon (97103) v1	lsiwmB268
Lsi03G005840	MELO3C018525	Melon (DHL92) v3.5.1	lsimeB247
Lsi03G005840	ClCG02G007070	Watermelon (Charleston Gray)	lsiwcgB233
Lsi03G005840	MELO3C018525.2	Melon (DHL92) v3.6.1	lsimedB260
Lsi03G005840	Cla97C02G033900	Watermelon (97103) v2	lsiwmbB226
Lsi03G005840	Bhi05G000880	Wax gourd	lsiwgoB320
Lsi03G005840	Cp4.1LG15g04330	Cucurbita pepo (Zucchini)	cpelsiB208
Lsi03G005840	CsGy7G006320	Cucumber (Gy14) v2	cgyblsiB488
Lsi03G005840	Carg16324	Silver-seed gourd	carlsiB411
Lsi03G005840	CsaV3_7G007770	Cucumber (Chinese Long) v3	cuclsiB555

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G005840	Wax gourd	lsiwgoB307
Lsi03G005840	Bottle gourd (USVL1VR-Ls)	lsilsiB126
Lsi03G005840	Cucurbita maxima (Rimu)	cmalsiB116
Lsi03G005840	Cucurbita maxima (Rimu)	cmalsiB662
Lsi03G005840	Cucurbita moschata (Rifu)	cmolsiB103
Lsi03G005840	Cucurbita moschata (Rifu)	cmolsiB650
Lsi03G005840	Cucurbita pepo (Zucchini)	cpelsiB543
Lsi03G005840	Melon (DHL92) v3.5.1	lsimeB268
Lsi03G005840	Watermelon (Charleston Gray)	lsiwcgB223
Lsi03G005840	Watermelon (97103) v1	lsiwmB245
Lsi03G005840	Melon (DHL92) v3.6.1	lsimedB281
Lsi03G005840	Silver-seed gourd	carlsiB342
Lsi03G005840	Silver-seed gourd	carlsiB672