Lsi03G005450 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAACCAGTCAACAGTTTATCATTCTTTTCCATCCTTATATAAACCAGCCAAGCTGCCAAGCTCAGCTTCACAATAACCATGGCTTCCCACAAGATCATCTTCTTCCTTTTTTCCTCTCTCCTTCTCCTACCAGCGATTTCTGCCGTTGAGTACACGGTCACCAACAACGCCGTTGGAACTCCCGGTGGCATACGCTTTGACAACGAAATCGGCGTGGCCTACAGCCGGCAGGTATTGGTAGCTGCCACTGATTTTATATGGAACATTTTCCGGCAACACTCTCCGGCTGACCGGAAAAATGTGCAGAAGGTTAGCCTATTCATTGTTACAGACTACGACGGAGTGGCATTTGCTAGCAACAATGAAATTCACGTTAGCGCTAACTATATTGCAAACTATGGCGGAGACTTGAAGAGGGAGATAACAGGTATTAAACTATACAAGTGACACGGAAATTAAACTTTCAATTTTGTGTGTATTCACTTTTTGAGTTTTACTTATAATCAGTTTATGAATTATTTAAAAATGTCAATTTGATGGTAGTATATCACATGTAAGCACAGAACTAAAGGAAAATTCAAACAATTTAATTGATTATTTTTAAGACAATTTAAAGTTTAATCATTTTTTTAATTTTGACCATTTTTTGAATTTAAAACAGATTGAATTGAAGAATAATGATACATTTAGTTGGAATATATTACATTTAAACCTACCACTAAATTTAATTCGTGTTCTTGACCATGGAAATATTGAACAACAAAATATCATAATACATATTTTTTATGACGAAAAGAGTACATTTTAAATTATATTTATTTTTGTGAAATAACTCTAATCGAACACAACACACTAATAATAAAATCAAAACAAAAACTTTCAAATATTTTTTCTATAAAAAAGAAAAAATAATTTGTCACGTGACAAGAGCTGCACAAAGATGAATATAACCCAAGATATACCTAAATATTTTTTTTTTATGATACAATAGTATATCATGTAATAAACTATTATATTTACCTTGTTATTAAAATTATTATAGAAATATCATTTGGTCGTGAATTATTATATTTAATCTTTTATTCACATTCTTAATGTCAGGAGTGCTATACCACGAAATGACTCATATCTGGCAGTGGAACGGGAACCCGAGCGCACCGGGCGGGTTGATCGAAGGGATCGCCGATTACGTACGGCTGAAGTCGGGGTACATACCGGGGCACTGGGTGGGGCCAGGCGGCGGGAGTAGGTGGGACCAAGGCTACGACGTGACGGCGAGATTTTTGGATTATTTAGAGGGGCTGAGAAATGGGTTCGTGGCGGAGCTGAACCGGAGGCTAAAAAATGGCTACTCCGCCAATTACTTCGTGCAGTTGCTGGGGAAACCGGTGGATCAGCTCTGGGCTGATTACAAGGCAGCCTACGGAAATTAGGACTCTTATGGGTGTGGATTATTGAATAATAAAATAAGGCTGTCTCTGATTAATTATTGCTTATATTATACAATATATAACGTATGTTACATATTATGTATCCAATAGTTTTATAATTTGAGATAAAAATAAAGGAGGTGTTGGCCGGCTTGGTCATAAGAGTATGAATTACTGTTATTT CAAAACCAGTCAACAGTTTATCATTCTTTTCCATCCTTATATAAACCAGCCAAGCTGCCAAGCTCAGCTTCACAATAACCATGGCTTCCCACAAGATCATCTTCTTCCTTTTTTCCTCTCTCCTTCTCCTACCAGCGATTTCTGCCGTTGAGTACACGGTCACCAACAACGCCGTTGGAACTCCCGGTGGCATACGCTTTGACAACGAAATCGGCGTGGCCTACAGCCGGCAGGTATTGGTAGCTGCCACTGATTTTATATGGAACATTTTCCGGCAACACTCTCCGGCTGACCGGAAAAATGTGCAGAAGGTTAGCCTATTCATTGTTACAGACTACGACGGAGTGGCATTTGCTAGCAACAATGAAATTCACGTTAGCGCTAACTATATTGCAAACTATGGCGGAGACTTGAAGAGGGAGATAACAGGAGTGCTATACCACGAAATGACTCATATCTGGCAGTGGAACGGGAACCCGAGCGCACCGGGCGGGTTGATCGAAGGGATCGCCGATTACGTACGGCTGAAGTCGGGGTACATACCGGGGCACTGGGTGGGGCCAGGCGGCGGGAGTAGGTGGGACCAAGGCTACGACGTGACGGCGAGATTTTTGGATTATTTAGAGGGGCTGAGAAATGGGTTCGTGGCGGAGCTGAACCGGAGGCTAAAAAATGGCTACTCCGCCAATTACTTCGTGCAGTTGCTGGGGAAACCGGTGGATCAGCTCTGGGCTGATTACAAGGCAGCCTACGGAAATTAGGACTCTTATGGGTGTGGATTATTGAATAATAAAATAAGGCTGTCTCTGATTAATTATTGCTTATATTATACAATATATAACGTATGTTACATATTATGTATCCAATAGTTTTATAATTTGAGATAAAAATAAAGGAGGTGTTGGCCGGCTTGGTCATAAGAGTATGAATTACTGTTATTT ATGGCTTCCCACAAGATCATCTTCTTCCTTTTTTCCTCTCTCCTTCTCCTACCAGCGATTTCTGCCGTTGAGTACACGGTCACCAACAACGCCGTTGGAACTCCCGGTGGCATACGCTTTGACAACGAAATCGGCGTGGCCTACAGCCGGCAGGTATTGGTAGCTGCCACTGATTTTATATGGAACATTTTCCGGCAACACTCTCCGGCTGACCGGAAAAATGTGCAGAAGGTTAGCCTATTCATTGTTACAGACTACGACGGAGTGGCATTTGCTAGCAACAATGAAATTCACGTTAGCGCTAACTATATTGCAAACTATGGCGGAGACTTGAAGAGGGAGATAACAGGAGTGCTATACCACGAAATGACTCATATCTGGCAGTGGAACGGGAACCCGAGCGCACCGGGCGGGTTGATCGAAGGGATCGCCGATTACGTACGGCTGAAGTCGGGGTACATACCGGGGCACTGGGTGGGGCCAGGCGGCGGGAGTAGGTGGGACCAAGGCTACGACGTGACGGCGAGATTTTTGGATTATTTAGAGGGGCTGAGAAATGGGTTCGTGGCGGAGCTGAACCGGAGGCTAAAAAATGGCTACTCCGCCAATTACTTCGTGCAGTTGCTGGGGAAACCGGTGGATCAGCTCTGGGCTGATTACAAGGCAGCCTACGGAAATTAG MASHKIIFFLFSSLLLLPAISAVEYTVTNNAVGTPGGIRFDNEIGVAYSRQVLVAATDFIWNIFRQHSPADRKNVQKVSLFIVTDYDGVAFASNNEIHVSANYIANYGGDLKREITGVLYHEMTHIWQWNGNPSAPGGLIEGIADYVRLKSGYIPGHWVGPGGGSRWDQGYDVTARFLDYLEGLRNGFVAELNRRLKNGYSANYFVQLLGKPVDQLWADYKAAYGN
BLAST of Lsi03G005450 vs. Swiss-Prot
Match: BSP_BOSSE (Basic secretory protease (Fragments) OS=Boswellia serrata PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.3e-09 Identity = 31/59 (52.54%), Postives = 36/59 (61.02%), Query Frame = 1
BLAST of Lsi03G005450 vs. TrEMBL
Match: A0A0A0K4M0_CUCSA (NtPRp27-like protein OS=Cucumis sativus GN=Csa_7G072810 PE=4 SV=1) HSP 1 Score: 419.9 bits (1078), Expect = 2.0e-114 Identity = 197/224 (87.95%), Postives = 211/224 (94.20%), Query Frame = 1
BLAST of Lsi03G005450 vs. TrEMBL
Match: A0A0A0K322_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G072800 PE=4 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 2.3e-89 Identity = 165/230 (71.74%), Postives = 191/230 (83.04%), Query Frame = 1
BLAST of Lsi03G005450 vs. TrEMBL
Match: V4SBG5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029208mg PE=4 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 5.0e-89 Identity = 158/222 (71.17%), Postives = 177/222 (79.73%), Query Frame = 1
BLAST of Lsi03G005450 vs. TrEMBL
Match: A5BS35_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038846 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 1.5e-88 Identity = 156/227 (68.72%), Postives = 183/227 (80.62%), Query Frame = 1
BLAST of Lsi03G005450 vs. TrEMBL
Match: D7SXW6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00160 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 3.3e-88 Identity = 156/227 (68.72%), Postives = 183/227 (80.62%), Query Frame = 1
BLAST of Lsi03G005450 vs. TAIR10
Match: AT2G15220.1 (AT2G15220.1 Plant basic secretory protein (BSP) family protein) HSP 1 Score: 296.6 bits (758), Expect = 1.3e-80 Identity = 137/226 (60.62%), Postives = 174/226 (76.99%), Query Frame = 1
BLAST of Lsi03G005450 vs. TAIR10
Match: AT2G15130.1 (AT2G15130.1 Plant basic secretory protein (BSP) family protein) HSP 1 Score: 271.6 bits (693), Expect = 4.5e-73 Identity = 127/226 (56.19%), Postives = 169/226 (74.78%), Query Frame = 1
BLAST of Lsi03G005450 vs. TAIR10
Match: AT2G15170.1 (AT2G15170.1 Plant basic secretory protein (BSP) family protein) HSP 1 Score: 72.0 bits (175), Expect = 5.2e-13 Identity = 40/101 (39.60%), Postives = 66/101 (65.35%), Query Frame = 1
BLAST of Lsi03G005450 vs. NCBI nr
Match: gi|449438369|ref|XP_004136961.1| (PREDICTED: uncharacterized protein LOC101221124 [Cucumis sativus]) HSP 1 Score: 419.9 bits (1078), Expect = 2.9e-114 Identity = 197/224 (87.95%), Postives = 211/224 (94.20%), Query Frame = 1
BLAST of Lsi03G005450 vs. NCBI nr
Match: gi|659109990|ref|XP_008454989.1| (PREDICTED: uncharacterized protein LOC103495269 [Cucumis melo]) HSP 1 Score: 406.4 bits (1043), Expect = 3.3e-110 Identity = 191/224 (85.27%), Postives = 207/224 (92.41%), Query Frame = 1
BLAST of Lsi03G005450 vs. NCBI nr
Match: gi|568867323|ref|XP_006486988.1| (PREDICTED: uncharacterized protein LOC102627881 [Citrus sinensis]) HSP 1 Score: 337.0 bits (863), Expect = 2.5e-89 Identity = 159/222 (71.62%), Postives = 178/222 (80.18%), Query Frame = 1
BLAST of Lsi03G005450 vs. NCBI nr
Match: gi|778725010|ref|XP_011658890.1| (PREDICTED: uncharacterized protein LOC105434420 [Cucumis sativus]) HSP 1 Score: 336.7 bits (862), Expect = 3.2e-89 Identity = 165/230 (71.74%), Postives = 191/230 (83.04%), Query Frame = 1
BLAST of Lsi03G005450 vs. NCBI nr
Match: gi|700188660|gb|KGN43893.1| (hypothetical protein Csa_7G072800 [Cucumis sativus]) HSP 1 Score: 336.7 bits (862), Expect = 3.2e-89 Identity = 165/230 (71.74%), Postives = 191/230 (83.04%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |