Lsi03G005430 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTACTGGCGTTCACTACCAACAACGAGATTCATGTCAGCGCAAACTATATTTCAAGCTATAATGGGGATTTGAAAAGGGAGATCACAGGTGCTTGCTACTATCCCCAAAGCTTAAAATTTATATTAGTTTCATTTTTTGTGTTTTAAGATCAAATGACAAATTTTAAAAACTAGAAAATATAATTTTTAAAAACTTGTTTTTATTTTTTAAAAATTAAGAATTCGAATGGTTAAAGGAAAATATGAAAATCATGCCTTTTCCAAGTAAAAAAATTTAAAAACAAAAAATTAAAACCAAATGATTACCAAATGGATTTATGTTTTTTAGTTTAAAAAACTTTGTTTAAATTTTGAAAACACTCTGCAAATAGGACAACAACAAAACAAGAAACCAATATGTGATTTAATATTTATAAACATACATTCTTGAAATTCAGAAACAAAAAATCTGTTAGGATAGAAACGAAATCCATAAGTAAAAAAAAAAACAAACAAAAAAATGGCATAGAAATTTATGTGGTTCACTAACAATCAATTTACGTCTAAAGGCATGTAGAAAAAGTAGATTATTATTGAAAAGAAATATAAAATAATACAAATAGTAGTGGTATCAATAGAGTTAGTATGTTTATATATGACACTTTTCTAAGCTCCATGTCCAAAAACAAAATAAATATAAACGAAATTTAACCAAATTTTAGTTAGAATGATATCATTTAATTCTAATCTTTTATTCTTATTCTTAATTATAGGGGTGTTGTACCACGAAATAACCCATATATGGCAGTGGAGTGGGAACTTGACGGCGCCCGGCGGGCTGATTGAAGGGATCGCCGATTACGTACGGCTTAAGTCGGGTTATATTCCGGGGCACTGGGCAGAGCCGGGCGACGGGAAGAGGTGGGACGAAGGCTACGATGTGACGGCGAGGTTTTTGGATTATTTGGAGGGGGTGAAAAGTGGGTTGGTGGCGAAGCTAAACCGGAGGCTGAGAAATGGCTACTCCGCCGATTACTTCCGGCAGTTGTTGGGGAAGCCGGTGGATCAGCTGTGGGCTGAGTATAAGACTAAGGCCAAGTATAGGAATATTGATAAGAAATGCAATAGTTTTGCAATTGAAGTCAATGGAGTTTTTGCCCTACAGCTGTAA ATGGAGGGTGTTTGGAGTGGGAACTTGACGGCGCCCGGCGGGCTGATTGAAGGGATCGCCGATTACGTACGGCTTAAGTCGGGTTATATTCCGGGGCACTGGGCAGAGCCGGGCGACGGGAAGAGGTGGGACGAAGGCTACGATGTGACGGCGAGGTTTTTGGATTATTTGGAGGGGGTGAAAAGTGGGTTGGTGGCGAAGCTAAACCGGAGGCTGAGAAATGGCTACTCCGCCGATTACTTCCGGCAGTTGTTGGGGAAGCCGGTGGATCAGCTGTGGGCTGAGTATAAGACTAAGGCCAAGTATAGGAATATTGATAAGAAATGCAATAGTTTTGCAATTGAAGTCAATGGAGTTTTTGCCCTACAGCTGTAA ATGGAGGGTGTTTGGAGTGGGAACTTGACGGCGCCCGGCGGGCTGATTGAAGGGATCGCCGATTACGTACGGCTTAAGTCGGGTTATATTCCGGGGCACTGGGCAGAGCCGGGCGACGGGAAGAGGTGGGACGAAGGCTACGATGTGACGGCGAGGTTTTTGGATTATTTGGAGGGGGTGAAAAGTGGGTTGGTGGCGAAGCTAAACCGGAGGCTGAGAAATGGCTACTCCGCCGATTACTTCCGGCAGTTGTTGGGGAAGCCGGTGGATCAGCTGTGGGCTGAGTATAAGACTAAGGCCAAGTATAGGAATATTGATAAGAAATGCAATAGTTTTGCAATTGAAGTCAATGGAGTTTTTGCCCTACAGCTGTAA MEGVWSGNLTAPGGLIEGIADYVRLKSGYIPGHWAEPGDGKRWDEGYDVTARFLDYLEGVKSGLVAKLNRRLRNGYSADYFRQLLGKPVDQLWAEYKTKAKYRNIDKKCNSFAIEVNGVFALQL
BLAST of Lsi03G005430 vs. Swiss-Prot
Match: BSP_BOSSE (Basic secretory protease (Fragments) OS=Boswellia serrata PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 6.5e-07 Identity = 27/55 (49.09%), Postives = 32/55 (58.18%), Query Frame = 1
BLAST of Lsi03G005430 vs. TrEMBL
Match: A0A0A0K322_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G072800 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 3.6e-49 Identity = 92/115 (80.00%), Postives = 102/115 (88.70%), Query Frame = 1
BLAST of Lsi03G005430 vs. TrEMBL
Match: A0A0A0K4M0_CUCSA (NtPRp27-like protein OS=Cucumis sativus GN=Csa_7G072810 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.9e-40 Identity = 79/100 (79.00%), Postives = 86/100 (86.00%), Query Frame = 1
BLAST of Lsi03G005430 vs. TrEMBL
Match: M5VHZ4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021584mg PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 7.9e-36 Identity = 67/95 (70.53%), Postives = 81/95 (85.26%), Query Frame = 1
BLAST of Lsi03G005430 vs. TrEMBL
Match: A0A061E155_THECC (Plant basic secretory protein (BSP) family protein OS=Theobroma cacao GN=TCM_007153 PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 1.8e-35 Identity = 68/100 (68.00%), Postives = 82/100 (82.00%), Query Frame = 1
BLAST of Lsi03G005430 vs. TrEMBL
Match: A0A068TMT0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014498001 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 2.3e-35 Identity = 67/95 (70.53%), Postives = 78/95 (82.11%), Query Frame = 1
BLAST of Lsi03G005430 vs. TAIR10
Match: AT2G15220.1 (AT2G15220.1 Plant basic secretory protein (BSP) family protein) HSP 1 Score: 147.9 bits (372), Expect = 4.1e-36 Identity = 64/95 (67.37%), Postives = 76/95 (80.00%), Query Frame = 1
BLAST of Lsi03G005430 vs. TAIR10
Match: AT2G15130.1 (AT2G15130.1 Plant basic secretory protein (BSP) family protein) HSP 1 Score: 135.6 bits (340), Expect = 2.1e-32 Identity = 57/93 (61.29%), Postives = 73/93 (78.49%), Query Frame = 1
BLAST of Lsi03G005430 vs. NCBI nr
Match: gi|778725010|ref|XP_011658890.1| (PREDICTED: uncharacterized protein LOC105434420 [Cucumis sativus]) HSP 1 Score: 213.0 bits (541), Expect = 3.0e-52 Identity = 98/121 (80.99%), Postives = 108/121 (89.26%), Query Frame = 1
BLAST of Lsi03G005430 vs. NCBI nr
Match: gi|700188660|gb|KGN43893.1| (hypothetical protein Csa_7G072800 [Cucumis sativus]) HSP 1 Score: 202.2 bits (513), Expect = 5.2e-49 Identity = 92/115 (80.00%), Postives = 102/115 (88.70%), Query Frame = 1
BLAST of Lsi03G005430 vs. NCBI nr
Match: gi|659109988|ref|XP_008454988.1| (PREDICTED: uncharacterized protein LOC103495268 [Cucumis melo]) HSP 1 Score: 198.0 bits (502), Expect = 9.9e-48 Identity = 91/120 (75.83%), Postives = 100/120 (83.33%), Query Frame = 1
BLAST of Lsi03G005430 vs. NCBI nr
Match: gi|449438369|ref|XP_004136961.1| (PREDICTED: uncharacterized protein LOC101221124 [Cucumis sativus]) HSP 1 Score: 171.4 bits (433), Expect = 9.9e-40 Identity = 79/100 (79.00%), Postives = 86/100 (86.00%), Query Frame = 1
BLAST of Lsi03G005430 vs. NCBI nr
Match: gi|645261632|ref|XP_008236385.1| (PREDICTED: uncharacterized protein LOC103335160 [Prunus mume]) HSP 1 Score: 162.9 bits (411), Expect = 3.5e-37 Identity = 71/100 (71.00%), Postives = 85/100 (85.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |