Lsi03G004560 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G004560
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	SNARE associated Golgi protein family
Location	chr03 : 5173604 .. 5177099 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAGGGATTTTTCTAAATACAGAGGTCAAATTGTCAAGAGGTTTCATTGAGATTGAGAATTGTCAAAAATAAAAATAAAAATAAAAATAAAAAGAGAAAAAAAAGTGGAAGAGATAGCGGATCCGTATCGATCATGTGGTTGAGCCATGGTTTTCTCGCCCTAGCTTCCGGTAACAGTGCCCTTCTCTCGAGGAGCGGCTCAGCCGGTAGCCGGTCGGAAGCCACCTCTGTACGCAACCTTTGAAGCTTCTGCAAATTGAGCGTTAATGGCGGCTCCGAGGAATCTGGCACTGAAAGACGAAGAGAAGGCGGAGATGAACAATCCAGCGGCGAAGAAGATGAAATCTGAGAGATATCCTTTCTCACGGTGGGGACTGGCGGTGGCTCTTGGCAGTTTTTTGGTATACTCCGCCGCGCTCTTCTGCATTTACCGTACAATGCCGGCCGCCGACTTCAACAACCTTAAGCTGCCACGATCCCTCGCCGATCTTCGAATGCTCAAGTAGGTGATTAATTTGTTTATTTTATTTTCACTTTTCCAATTGGATTGATTTCGATTTTTTTTTTAATTAAATCAAATTTAATTTAACTAACTTAAAAGGTTGCTGCTCATTCATATCATATTACCAATTCTTGCATCCTTATTCATTTCATGCTAATATCTCTCGTGAGTTGCATCAATGTGCGATGTATTAATTAAGAAATTTCTTGATTGAACTGTTGTGAAGCTTTGTGGCTTATTGTTTCATTAGAGAAGCAAGTTGAGGTTAGCAAATGATAGCTGATTTGGTATAGAGAGGGGAAGTAAATTGCTGCTCCCAAAGCCTTTATGTTAGGGAAAGACATTCATTGAGATGACGAAAATCTTGGATGTTTTGTTCAACTTTTAAGTGTGAACATATTTAACGTTAGAAGTGATTTTGAAATGGTTAAAATCATTTTTGTAAGTTTAAAATCCCTCCGAAAGACACTTTTAATAACTTAAAATCAATTTAATATTTAATTTTACACTTTTTGACAAATTTCATTATGTTGAAATTGATTTTGAATGATTAAAAGCATTTTTCGAGTGATTTTAACCATTTCAGAATCACTCCCAAACATGCTATTAGTGGCGGGAAGAAAATTAGAAAAGTAAAAAGGACCTTTGAGATTATAAATTCATATCACCCTCTAGGGAAATTAAAGCTTCAATAGTGATGATAATAAAATTAGGAAATAAAATATAGAGTAGGTATATTTCAAGATTTTGACATCTTTGAAATGTCTTAGGAGAGGTAGGAATTAATGAAGAAGAAGAAAGGAAGCTTTCAGAAATGACTAATGTAAAATTGGATGGAGACACCATAACTTTTCAGATAGGACACTATATAACTTACACAATATTAGGTGACTGTCTAAATCCTGTGGTTAGCAAACTAAGTCATAGAATTACAATCTATAATATTAGTCCTTTTCAACTAATTCAACTCGTTTCTTACCACCAACTAAGAATGAAAAAGAAAAGAAAAAGAAGCTGCTATATTTTATTCATCATAATAATGTTGTTGTTGATTTTGAATATGTTGTGTTTGACTTTTCCTTTTGGTGGGTTCCACTTCCATTTGATAGTTTTTGATTGCAATATAGCATTATGCGTATCCAAGATGCATTTTGTCTTTTAAATTTGTGAACCAGAGATAATCTTGGAAGCTACGCCAAGGATCACCCAGCACAGTTCATCCTGGGTTATTGTTCCACCTACATATTTATGCAAAGTTTTATGATCCCTGGAACAGTTTTCTTGTCATTGTTGGCTGGAGCTCTTTTTGGAGTTGTTAGAGGCCTTATATTAGTCGTTTTCAATGCTACGGCAGGAGCTACTGCTTGTTTTTTTCTCTCCAAATTAATTGGTAGACCTTTAGTTTCTTGGATGTGGCCTGAAAAATTGAAACTTTTCCAGTCAGAGGTAACTAAGGCCTGCCCATTCCTCCATCCTTTGTTTCTTCAGTTCATGTCAAGTGATTTTCACTAGTCTAATTACCTGTGGCATTTCAGATAGCAAAGCAAAGAGAAAAGCTGCTTAATTACATGGTTTTTCTGAGGATAACACCAACACTACCTAACATTTTCATAAACTTGGCATCGCCCATCGTCGATATTCCATTTCATGTTTTCCTTTTAGCTACGCTCATCGGTCTTGTTCCTTCATCATATATCATGGTCAGGGTAAGTTTTCTCAGTCATCCAAGGTCTTGTCTAGACTATGTTTCTCACATTGTTTTAACTTTTAGCTTTTGCCATTTTCAATCATGTACATTGTACCATCAGCTCTAATTCTAGCTATTGCATATTCCGCTTGTATTCTATAAAGCATTGATTGTAGGTATTTACATTCCGTGTTTTAATGCATAAATCAATGAAATCAATATGAATATGACCTCAATTTGCTACAATCCACTAATAGCAAAGGACCCATTTGTACATTTAAAATTTCACTTTCCACTTGCAGGTTTTGCCTCATTTTACGGATTATTTATGCTATGACCCTACCCGTCTGTCATTTTCATATTTATGTTCTAGTGGCTTTCTGGATATTTAATTATGAAAACGCTTTCTGTTTATCATCTTCATATTTTATGTTTTAGTGGCTTTCTGGATAATTAATTACGAAAATAATTCTGTCTATCATCTTGATATTTATGTTTTATTGGCTTTCTGGATTTTAATTATGAAAACGATTTCTATTTCTTTCATGGGATCTCCCCCTTATCGCACATGAAGATTTGTTCTGACATGCTTTTCAAGCATATATAATCGAGTTCCTAATCCTATCTTCTTCAATCAGGCTGGTCTTGCTCTTGGGGATCTCAAATCCGTCAAGGATTTATATGATTTCAAAACCTTGACCGTACTTTTCTTCATCGGTTCTTTGTCCGTACTTCCCACTCTTCTAAAGCGAAAGCGAACCTATGAATGAAGATTCTACATACAGGAATTTTTACTAATTCTAGTTCTATAACCATAAGTTATCAGAGGATCTACCGACTATTGGAATGAAAGATTGGAGTCTTAAGTCAAACTATGGCAGTAATGTGAGCTTCACAAGTTCAAGTATCGAGGATTTTCCGCTACTGAAAAGGATCCATCACAGTGTTGTGTGTGTTTATTTACTGAATCATCTCTACAGCTTATTCTTTTGCACTCTGATTTCATTCTAGAGCATAGTATTATTTTTTCATTACTTCTACCCAGAAGCATAAAGAAAAGATTTGTACCCAGTATTATTTTTTCATTACTTCTACCCAGAAGCATAAAGAAAAGATTTGTACCCGTGGCTAAGCGCCTAGCAATGATAAATTTTGATGCAGGATTCGCATCTTGTGACACGGTGTTGATGTGACAGTACATAAATTCGAATTGTGAAAGTCTATAGGTCTTTTAACTGAGTGAGTGTTGGGATCGACATGATGATAACATTCAGTTTTGTGACAAACAACAAATACAAGTGCTG

mRNA sequence

GAAAAAGGGATTTTTCTAAATACAGAGGTCAAATTGTCAAGAGGTTTCATTGAGATTGAGAATTGTCAAAAATAAAAATAAAAATAAAAATAAAAAGAGAAAAAAAAGTGGAAGAGATAGCGGATCCGTATCGATCATGTGGTTGAGCCATGGTTTTCTCGCCCTAGCTTCCGGTAACAGTGCCCTTCTCTCGAGGAGCGGCTCAGCCGGTAGCCGGTCGGAAGCCACCTCTGTACGCAACCTTTGAAGCTTCTGCAAATTGAGCGTTAATGGCGGCTCCGAGGAATCTGGCACTGAAAGACGAAGAGAAGGCGGAGATGAACAATCCAGCGGCGAAGAAGATGAAATCTGAGAGATATCCTTTCTCACGGTGGGGACTGGCGGTGGCTCTTGGCAGTTTTTTGGTATACTCCGCCGCGCTCTTCTGCATTTACCGTACAATGCCGGCCGCCGACTTCAACAACCTTAAGCTGCCACGATCCCTCGCCGATCTTCGAATGCTCAAAGATAATCTTGGAAGCTACGCCAAGGATCACCCAGCACAGTTCATCCTGGGTTATTGTTCCACCTACATATTTATGCAAAGTTTTATGATCCCTGGAACAGTTTTCTTGTCATTGTTGGCTGGAGCTCTTTTTGGAGTTGTTAGAGGCCTTATATTAGTCGTTTTCAATGCTACGGCAGGAGCTACTGCTTGTTTTTTTCTCTCCAAATTAATTGGTAGACCTTTAGTTTCTTGGATGTGGCCTGAAAAATTGAAACTTTTCCAGTCAGAGATAGCAAAGCAAAGAGAAAAGCTGCTTAATTACATGGTTTTTCTGAGGATAACACCAACACTACCTAACATTTTCATAAACTTGGCATCGCCCATCGTCGATATTCCATTTCATGTTTTCCTTTTAGCTACGCTCATCGGTCTTGTTCCTTCATCATATATCATGGTCAGGGCTGGTCTTGCTCTTGGGGATCTCAAATCCGTCAAGGATTTATATGATTTCAAAACCTTGACCGTACTTTTCTTCATCGGTTCTTTGTCCGTACTTCCCACTCTTCTAAAGCGAAAGCGAACCTATGAATGAAGATTCTACATACAGGAATTTTTACTAATTCTAGTTCTATAACCATAAGTTATCAGAGGATCTACCGACTATTGGAATGAAAGATTGGAGTCTTAAGTCAAACTATGGCAGTAATGTGAGCTTCACAAGTTCAAGTATCGAGGATTTTCCGCTACTGAAAAGGATCCATCACAGTGTTGTGTGTGTTTATTTACTGAATCATCTCTACAGCTTATTCTTTTGCACTCTGATTTCATTCTAGAGCATAGTATTATTTTTTCATTACTTCTACCCAGAAGCATAAAGAAAAGATTTGTACCCAGTATTATTTTTTCATTACTTCTACCCAGAAGCATAAAGAAAAGATTTGTACCCGTGGCTAAGCGCCTAGCAATGATAAATTTTGATGCAGGATTCGCATCTTGTGACACGGTGTTGATGTGACAGTACATAAATTCGAATTGTGAAAGTCTATAGGTCTTTTAACTGAGTGAGTGTTGGGATCGACATGATGATAACATTCAGTTTTGTGACAAACAACAAATACAAGTGCTG

Coding sequence (CDS)

ATGGCGGCTCCGAGGAATCTGGCACTGAAAGACGAAGAGAAGGCGGAGATGAACAATCCAGCGGCGAAGAAGATGAAATCTGAGAGATATCCTTTCTCACGGTGGGGACTGGCGGTGGCTCTTGGCAGTTTTTTGGTATACTCCGCCGCGCTCTTCTGCATTTACCGTACAATGCCGGCCGCCGACTTCAACAACCTTAAGCTGCCACGATCCCTCGCCGATCTTCGAATGCTCAAAGATAATCTTGGAAGCTACGCCAAGGATCACCCAGCACAGTTCATCCTGGGTTATTGTTCCACCTACATATTTATGCAAAGTTTTATGATCCCTGGAACAGTTTTCTTGTCATTGTTGGCTGGAGCTCTTTTTGGAGTTGTTAGAGGCCTTATATTAGTCGTTTTCAATGCTACGGCAGGAGCTACTGCTTGTTTTTTTCTCTCCAAATTAATTGGTAGACCTTTAGTTTCTTGGATGTGGCCTGAAAAATTGAAACTTTTCCAGTCAGAGATAGCAAAGCAAAGAGAAAAGCTGCTTAATTACATGGTTTTTCTGAGGATAACACCAACACTACCTAACATTTTCATAAACTTGGCATCGCCCATCGTCGATATTCCATTTCATGTTTTCCTTTTAGCTACGCTCATCGGTCTTGTTCCTTCATCATATATCATGGTCAGGGCTGGTCTTGCTCTTGGGGATCTCAAATCCGTCAAGGATTTATATGATTTCAAAACCTTGACCGTACTTTTCTTCATCGGTTCTTTGTCCGTACTTCCCACTCTTCTAAAGCGAAAGCGAACCTATGAATGA

Protein sequence

MAAPRNLALKDEEKAEMNNPAAKKMKSERYPFSRWGLAVALGSFLVYSAALFCIYRTMPAADFNNLKLPRSLADLRMLKDNLGSYAKDHPAQFILGYCSTYIFMQSFMIPGTVFLSLLAGALFGVVRGLILVVFNATAGATACFFLSKLIGRPLVSWMWPEKLKLFQSEIAKQREKLLNYMVFLRITPTLPNIFINLASPIVDIPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVKDLYDFKTLTVLFFIGSLSVLPTLLKRKRTYE

Homology

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BLAST of Lsi03G004560 vs. Swiss-Prot
Match: Y4958_ARATH (Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana GN=At4g09580 PE=1 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 2.4e-107
Identity = 198/287 (68.99%), Postives = 239/287 (83.28%), Query Frame = 1


Query: 1   MAAPRNLA--------LKDEE--------KAEMNN--PAAKKMKSERYPFSRWGLAVALG 60
           MAAPRNL         +KDEE        K  +N+  P  K+ KSER+P SRW  AV   
Sbjct: 1   MAAPRNLTGDGGARQLVKDEESPAASSAAKGLLNDDSPTGKRTKSERFPLSRWEFAVFFT 60

Query: 61  SFLVYSAALFCIYRTMPAADFNNLKLPRSLADLRMLKDNLGSYAKDHPAQFILGYCSTYI 120
            FLV++  LFCIY TMPAA++  LK+PR+++DLR+LK+NLGSYA ++ A+FILGYCSTYI
Sbjct: 61  VFLVFTTGLFCIYLTMPAAEYGKLKVPRTISDLRLLKENLGSYASEYQARFILGYCSTYI 120

Query: 121 FMQSFMIPGTVFLSLLAGALFGVVRGLILVVFNATAGATACFFLSKLIGRPLVSWMWPEK 180
           FMQ+FMIPGT+F+SLLAGALFGVVRG +LVV NATAGA +CFFLSKL+GRPLV+W+WPEK
Sbjct: 121 FMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNATAGACSCFFLSKLVGRPLVNWLWPEK 180

Query: 181 LKLFQSEIAKQREKLLNYMVFLRITPTLPNIFINLASPIVDIPFHVFLLATLIGLVPSSY 240
           L+ FQ+EIAK+R++LLNYM+FLRITPTLPN+FINL+SPIVDIPFHVF LATL+GL+P+SY
Sbjct: 181 LRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFINLSSPIVDIPFHVFFLATLVGLMPASY 240

Query: 241 IMVRAGLALGDLKSVKDLYDFKTLTVLFFIGSLSVLPTLLKRKRTYE 270
           I VRAGLALGDL+SVKDLYDFKTL+VLF IGS+S+ P LLKRKR YE
Sbjct: 241 ITVRAGLALGDLRSVKDLYDFKTLSVLFLIGSISIFPALLKRKRVYE 287

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BLAST of Lsi03G004560 vs. Swiss-Prot
Match: TM41_DICDI (Transmembrane protein 41 homolog OS=Dictyostelium discoideum GN=DDB_G0275543 PE=3 SV=2)

HSP 1 Score: 186.0 bits (471), Expect = 5.3e-46
Identity = 95/235 (40.43%), Postives = 152/235 (64.68%), Query Frame = 1


Query: 31  PFSRWGLAVALGSFLVYSAALFCIYRTMPAADFNNLKLPRSLADLRMLKDNLGSYAKDHP 90
           P   W L +  G  +     LF  + ++       ++LP++  D+++L D L  Y  D+ 
Sbjct: 96  PLPLWLLVIVFGVSISVIVFLFLNFPSLSPQHKQLIRLPKNFKDVKLLSDILSQYTDDNY 155

Query: 91  AQFILGYCSTYIFMQSFMIPGTVFLSLLAGALFGVVRGLILVVFNATAGATACFFLSKLI 150
              I  +   Y F+Q+F IPG+VFLS L+G LFG+  G  LV F AT GAT  + +S  I
Sbjct: 156 FIVITTFGVIYTFLQAFSIPGSVFLSFLSGGLFGLKVGFPLVCFVATLGATFSYLISYYI 215

Query: 151 GRPLVSWMWPEKLKLFQSEIAKQREKLLNYMVFLRITPTLPNIFINLASPIVDIPFHVFL 210
           GR LV  ++P+KLKLF   ++++R+ LLNY+VFLRITP LPN FINLASP++D+P H F 
Sbjct: 216 GRNLVRKLFPDKLKLFSDSLSQKRDNLLNYIVFLRITPFLPNWFINLASPLLDVPIHTFA 275

Query: 211 LATLIGLVPSSYIMVRAGLALGDLKSVKDLYDFKTLTVLFFIGSLSVLPTLLKRK 266
           + T IG++P++++ V+AG+ + ++++  D++D K++  +  +  LS+LPTL+++K
Sbjct: 276 IGTFIGIMPATFLAVKAGIQIQNIQNPSDIFDLKSILTMAALALLSILPTLIQKK 330

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BLAST of Lsi03G004560 vs. Swiss-Prot
Match: TM41_DROME (Transmembrane protein 41 homolog OS=Drosophila melanogaster GN=stas PE=2 SV=2)

HSP 1 Score: 165.2 bits (417), Expect = 9.6e-40
Identity = 89/259 (34.36%), Postives = 147/259 (56.76%), Query Frame = 1


Query: 10  KDEEKAEMNNPAAKKMKSERYPFSRWGLAVALGSF---LVYSAALFCIYRTMPAADFNNL 69
           + +++ +   P  + M ++    ++  L +  G F   LV    ++ I+  + A++  +L
Sbjct: 55  QQQQQQQQATPQKQAMSADEKKATKKSLVIVAGIFVASLVTMCYVYAIFPELNASEKQHL 114

Query: 70  KLPRSLADLRMLKDNLGSYAKDHPAQFILGYCSTYIFMQSFMIPGTVFLSLLAGALFGVV 129
           K+PR + D +ML   L  Y   +  + + G    Y+F+Q+F IPG++FLS+L G L+   
Sbjct: 115 KIPRDIQDAKMLAKVLDRYKDMYYFEVMFGVVVAYVFLQTFAIPGSLFLSILLGFLYKFP 174

Query: 130 RGLILVVFNATAGATACFFLSKLIGRPLVSWMWPEKLKLFQSEIAKQREKLLNYMVFLRI 189
             L L+ F +  GAT C+ LS L+GR L+   WP+K   +   + + R+ L NYM+FLR+
Sbjct: 175 IALFLICFCSALGATLCYTLSNLVGRRLIRHFWPKKTSEWSKHVEEYRDSLFNYMLFLRM 234

Query: 190 TPTLPNIFINLASPIVDIPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVKDLYDFKTL 249
           TP LPN FINLASP++ +P H+F L T  G+ P S I ++AG  L  + S  + + + ++
Sbjct: 235 TPILPNWFINLASPVIGVPLHIFALGTFCGVAPPSVIAIQAGKTLQKMTSSSEAFSWTSM 294

Query: 250 TVLFFIGSLSVLPTLLKRK 266
            +L      S+LP LLK K
Sbjct: 295 GILMACACASLLPGLLKNK 313

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BLAST of Lsi03G004560 vs. Swiss-Prot
Match: TM41B_XENLA (Transmembrane protein 41B OS=Xenopus laevis GN=tmem41b PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 4.8e-39
Identity = 88/253 (34.78%), Postives = 148/253 (58.50%), Query Frame = 1


Query: 16  EMNNPAAKKMKSERYPFSRWGLAVALGSFLVYSAALFCIYRTMPAA---DFNNLKLPRSL 75
           E   PAA K+ SE    +R  L + +  FL  ++ +F +Y+  P     +   +K+PR +
Sbjct: 21  EKKAPAAGKVHSEGGS-ARMSLLILVSIFLCAASVMFLVYKYFPQLSEEELEKIKVPRDM 80

Query: 76  ADLRMLKDNLGSYAKDHPAQFILGYCSTYIFMQSFMIPGTVFLSLLAGALFGVVRGLILV 135
            D + L   L  Y      + ++ Y +TYIF+Q+F IPG++FLS+L+G L+     L LV
Sbjct: 81  DDAKALGKVLSKYKDTFYVEVLVAYFTTYIFLQTFAIPGSIFLSILSGFLYPFPLALFLV 140

Query: 136 VFNATAGATACFFLSKLIGRPLVSWMWPEKLKLFQSEIAKQREKLLNYMVFLRITPTLPN 195
              +  GA+ C+ LS L+GRP+V     +K   +  ++ + R+ L+NY++FLRITP LPN
Sbjct: 141 CLCSGLGASFCYLLSYLVGRPVVYKYLSDKAIKWSQQVERHRDHLINYIIFLRITPFLPN 200

Query: 196 IFINLASPIVDIPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVKDLYDFKTLTVLFFI 255
            FIN+ SP++++P  VF L T IG+ P S++ ++AG  L  L +  +   + ++ +L  +
Sbjct: 201 WFINITSPVINVPLKVFFLGTFIGVAPPSFVAIKAGTTLYQLTTAGEAVSWNSVIILMVL 260

Query: 256 GSLSVLPTLLKRK 266
             LS+LP + ++K
Sbjct: 261 AVLSILPAIFQKK 272

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BLAST of Lsi03G004560 vs. Swiss-Prot
Match: TM41B_HUMAN (Transmembrane protein 41B OS=Homo sapiens GN=TMEM41B PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 8.1e-39
Identity = 83/236 (35.17%), Postives = 139/236 (58.90%), Query Frame = 1


Query: 33  SRWGLAVALGSFLVYSAALFCIYRTMPAADFN---NLKLPRSLADLRMLKDNLGSYAKDH 92
           +R  L + +  FL  +  +F +Y+  P        N+K+PR + D + L   L  Y    
Sbjct: 50  ARMSLLILVSIFLSAAFVMFLVYKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTF 109

Query: 93  PAQFILGYCSTYIFMQSFMIPGTVFLSLLAGALFGVVRGLILVVFNATAGATACFFLSKL 152
             Q ++ Y +TYIF+Q+F IPG++FLS+L+G L+     L LV   +  GA+ C+ LS L
Sbjct: 110 YVQVLVAYFATYIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYL 169

Query: 153 IGRPLVSWMWPEKLKLFQSEIAKQREKLLNYMVFLRITPTLPNIFINLASPIVDIPFHVF 212
           +GRP+V     EK   +  ++ + RE L+NY++FLRITP LPN FIN+ SP++++P  VF
Sbjct: 170 VGRPVVYKYLTEKAVKWSQQVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVF 229

Query: 213 LLATLIGLVPSSYIMVRAGLALGDLKSVKDLYDFKTLTVLFFIGSLSVLPTLLKRK 266
            + T +G+ P S++ ++AG  L  L +  +   + ++ +L  +  LS+LP + ++K
Sbjct: 230 FIGTFLGVAPPSFVAIKAGTTLYQLTTAGEAVSWNSIFILMILAVLSILPAIFQKK 285

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BLAST of Lsi03G004560 vs. TrEMBL
Match: A0A0A0LSW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G402630 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 5.5e-135
Identity = 249/269 (92.57%), Postives = 259/269 (96.28%), Query Frame = 1


Query: 1   MAAPRNLALKDEEKAEMNNPAAKKMKSERYPFSRWGLAVALGSFLVYSAALFCIYRTMPA 60
           MAAPRNL L+DEEKAEMNNPAAKKMKSERYPFSRWGL VALGSFLVYSAALFCIYRTMPA
Sbjct: 1   MAAPRNLVLRDEEKAEMNNPAAKKMKSERYPFSRWGLTVALGSFLVYSAALFCIYRTMPA 60

Query: 61  ADFNNLKLPRSLADLRMLKDNLGSYAKDHPAQFILGYCSTYIFMQSFMIPGTVFLSLLAG 120
           ADF  +KLPRSLADLRMLKD+LGSYAKDH  +FILGYCSTYIFMQ+FMIPGTVFLSLL G
Sbjct: 61  ADFKYIKLPRSLADLRMLKDHLGSYAKDHTGRFILGYCSTYIFMQTFMIPGTVFLSLLGG 120

Query: 121 ALFGVVRGLILVVFNATAGATACFFLSKLIGRPLVSWMWPEKLKLFQSEIAKQREKLLNY 180
           ALFGVVRGL+LVVFNATAGATACFFLS LIGRP VSWMWPEKLK FQSEIAKQREKLLNY
Sbjct: 121 ALFGVVRGLVLVVFNATAGATACFFLSNLIGRPFVSWMWPEKLKTFQSEIAKQREKLLNY 180

Query: 181 MVFLRITPTLPNIFINLASPIVDIPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVKDL 240
           M+FLRITPTLPNIFINLASPIVDIPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVKDL
Sbjct: 181 MIFLRITPTLPNIFINLASPIVDIPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVKDL 240

Query: 241 YDFKTLTVLFFIGSLSVLPTLLKRKRTYE 270
           YDFKTLT+LFFIGSLS+LPTLLKRK+TYE
Sbjct: 241 YDFKTLTLLFFIGSLSILPTLLKRKQTYE 269

[Close]

BLAST of Lsi03G004560 vs. TrEMBL
Match: A0A0A0K623_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G273650 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 3.5e-113
Identity = 209/270 (77.41%), Postives = 243/270 (90.00%), Query Frame = 1


Query: 1   MAAPRNLALKDEEKA-EMNNPAAKKMKSERYPFSRWGLAVALGSFLVYSAALFCIYRTMP 60
           MAA RN+ ++DEEK  E ++P AKK K ER+P ++W LA ALG FL+ S  L C+Y TMP
Sbjct: 1   MAASRNVGMRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLLCSTGLVCVYLTMP 60

Query: 61  AADFNNLKLPRSLADLRMLKDNLGSYAKDHPAQFILGYCSTYIFMQSFMIPGTVFLSLLA 120
           +A++ ++KLPR+L+DLR+LKD   +YAKDHPAQFILGYCSTYIFMQ+FMIPGT+F+SLLA
Sbjct: 61  SAEYQSVKLPRTLSDLRVLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLA 120

Query: 121 GALFGVVRGLILVVFNATAGATACFFLSKLIGRPLVSWMWPEKLKLFQSEIAKQREKLLN 180
           GALFGV+RGL+LVVFNATAGA++CFFLSKLIGRPLV WMWPEKLKLFQ+EIAK REKLLN
Sbjct: 121 GALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKLFQAEIAKHREKLLN 180

Query: 181 YMVFLRITPTLPNIFINLASPIVDIPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVKD 240
           YM+FLRITPTLPN+FINLASPIVDIPFHVF LATLIGLVP+SYI VRAGLALG+LKSVKD
Sbjct: 181 YMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGELKSVKD 240

Query: 241 LYDFKTLTVLFFIGSLSVLPTLLKRKRTYE 270
           LYDFKTL+VLFFIG +S+LPTLLKRKR YE
Sbjct: 241 LYDFKTLSVLFFIGFISILPTLLKRKRVYE 270

[Close]

BLAST of Lsi03G004560 vs. TrEMBL
Match: U5FSV4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s11730g PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 5.0e-112
Identity = 201/264 (76.14%), Postives = 240/264 (90.91%), Query Frame = 1


Query: 7   LALKDEEKA-EMNNPAAKKMKSERYPFSRWGLAVALGSFLVYSAALFCIYRTMPAADFNN 66
           L ++DEEKA E ++P+AK+ K ER+P +RW LA ALG FLV+S  LFCIY TMPAAD+  
Sbjct: 21  LTMRDEEKAKEDDSPSAKRSKFERFPLTRWELAAALGVFLVFSTGLFCIYLTMPAADYGK 80

Query: 67  LKLPRSLADLRMLKDNLGSYAKDHPAQFILGYCSTYIFMQSFMIPGTVFLSLLAGALFGV 126
           LKLPRS++DLR+LKDNL +Y  ++PAQFILGYCSTYIFMQ+FMIPGT+F+SLLAGALFG+
Sbjct: 81  LKLPRSISDLRLLKDNLATYVSEYPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGI 140

Query: 127 VRGLILVVFNATAGATACFFLSKLIGRPLVSWMWPEKLKLFQSEIAKQREKLLNYMVFLR 186
           VRGL LVVFNATAGA++CFFLSKLIGRPLV+W+WPEK++ FQSEIAK++EKLLNYM+FLR
Sbjct: 141 VRGLFLVVFNATAGASSCFFLSKLIGRPLVNWLWPEKMRFFQSEIAKRKEKLLNYMLFLR 200

Query: 187 ITPTLPNIFINLASPIVDIPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVKDLYDFKT 246
           +TPTLPN+FINLASPIVDIPFH+F LATL+GL+P+SYI V+AGLALGDLKSVKDLYDFKT
Sbjct: 201 VTPTLPNLFINLASPIVDIPFHIFFLATLLGLIPASYITVKAGLALGDLKSVKDLYDFKT 260

Query: 247 LTVLFFIGSLSVLPTLLKRKRTYE 270
           L+VLF IGS+S+ PTLLKRKR YE
Sbjct: 261 LSVLFLIGSISIFPTLLKRKRIYE 284

[Close]

BLAST of Lsi03G004560 vs. TrEMBL
Match: M5XU81_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009809mg PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 8.6e-112
Identity = 207/276 (75.00%), Postives = 243/276 (88.04%), Query Frame = 1


Query: 1   MAAPRNLA------LKDEEKAEMNN-PAAKKMKSERYPFSRWGLAVALGSFLVYSAALFC 60
           MAAPRNL       L+DEE A+ ++  A KK+KSER+P +RW  A ALG F+V+S  L C
Sbjct: 1   MAAPRNLVGDAGRLLRDEESAKEDDWSAGKKLKSERFPLTRWEFAAALGVFVVFSTGLIC 60

Query: 61  IYRTMPAADFNNLKLPRSLADLRMLKDNLGSYAKDHPAQFILGYCSTYIFMQSFMIPGTV 120
           +Y TMPAA++  LKLPR++ADLR+LKD+L +YAKD+PAQFILGYCSTYIFMQ+FMIPGT+
Sbjct: 61  VYLTMPAAEYGKLKLPRTIADLRLLKDHLATYAKDYPAQFILGYCSTYIFMQTFMIPGTI 120

Query: 121 FLSLLAGALFGVVRGLILVVFNATAGATACFFLSKLIGRPLVSWMWPEKLKLFQSEIAKQ 180
           F+SLLAGALFGV+RGL+LVVFNATAGA++CFFLSKLIGRPLVSW+WPEKL+ FQ+EIAK+
Sbjct: 121 FMSLLAGALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVSWLWPEKLRFFQAEIAKR 180

Query: 181 REKLLNYMVFLRITPTLPNIFINLASPIVDIPFHVFLLATLIGLVPSSYIMVRAGLALGD 240
           REKLLNYM+FLRITPTLPN+FINLASPIVDIPFHVF LAT IGL+P+SYI VRAGLALG+
Sbjct: 181 REKLLNYMLFLRITPTLPNLFINLASPIVDIPFHVFFLATFIGLIPASYITVRAGLALGE 240

Query: 241 LKSVKDLYDFKTLTVLFFIGSLSVLPTLLKRKRTYE 270
           LKSVKDLYDFKTL VLF IGS+ + PTLLKRKR YE
Sbjct: 241 LKSVKDLYDFKTLVVLFLIGSVIIFPTLLKRKRIYE 276

[Close]

BLAST of Lsi03G004560 vs. TrEMBL
Match: B9IQJ1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s11320g PE=4 SV=2)

HSP 1 Score: 409.5 bits (1051), Expect = 3.3e-111
Identity = 200/266 (75.19%), Postives = 241/266 (90.60%), Query Frame = 1


Query: 5   RNLALKDEEKA-EMNNPAAKKMKSERYPFSRWGLAVALGSFLVYSAALFCIYRTMPAADF 64
           R L ++DEEKA E ++P+AK+ K ER+P +RW LA ALG F V+S  LFCIY TMPAA++
Sbjct: 20  RVLTMRDEEKAKEDDSPSAKRAKFERFPLTRWELAAALGVFFVFSTGLFCIYLTMPAAEY 79

Query: 65  NNLKLPRSLADLRMLKDNLGSYAKDHPAQFILGYCSTYIFMQSFMIPGTVFLSLLAGALF 124
             LKLPR+++DLR+LKDNL +YA ++PAQFILGYCSTYIFMQ+FMIPGT+F+SLLAGALF
Sbjct: 80  GKLKLPRTISDLRLLKDNLATYANEYPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALF 139

Query: 125 GVVRGLILVVFNATAGATACFFLSKLIGRPLVSWMWPEKLKLFQSEIAKQREKLLNYMVF 184
           GVVRG+ LVVFNATAGA++CFFLSKLIGRPLV+W+WPEKL+ FQ+EIAK+R+KLLNYM+F
Sbjct: 140 GVVRGIFLVVFNATAGASSCFFLSKLIGRPLVNWLWPEKLRFFQAEIAKRRDKLLNYMLF 199

Query: 185 LRITPTLPNIFINLASPIVDIPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVKDLYDF 244
           LR+TPTLPN+FINLASPIVDIPFH+F LATL+GL+P+SYI VRAGLALGDLKSVKDLYD+
Sbjct: 200 LRVTPTLPNLFINLASPIVDIPFHIFFLATLLGLIPASYITVRAGLALGDLKSVKDLYDY 259

Query: 245 KTLTVLFFIGSLSVLPTLLKRKRTYE 270
           KTL+VLF IGS+S+ PTLLKRKR YE
Sbjct: 260 KTLSVLFIIGSISIFPTLLKRKRIYE 285

[Close]

BLAST of Lsi03G004560 vs. TAIR10
Match: AT4G09580.1 (AT4G09580.1 SNARE associated Golgi protein family)

HSP 1 Score: 389.8 bits (1000), Expect = 1.4e-108
Identity = 198/287 (68.99%), Postives = 239/287 (83.28%), Query Frame = 1


Query: 1   MAAPRNLA--------LKDEE--------KAEMNN--PAAKKMKSERYPFSRWGLAVALG 60
           MAAPRNL         +KDEE        K  +N+  P  K+ KSER+P SRW  AV   
Sbjct: 1   MAAPRNLTGDGGARQLVKDEESPAASSAAKGLLNDDSPTGKRTKSERFPLSRWEFAVFFT 60

Query: 61  SFLVYSAALFCIYRTMPAADFNNLKLPRSLADLRMLKDNLGSYAKDHPAQFILGYCSTYI 120
            FLV++  LFCIY TMPAA++  LK+PR+++DLR+LK+NLGSYA ++ A+FILGYCSTYI
Sbjct: 61  VFLVFTTGLFCIYLTMPAAEYGKLKVPRTISDLRLLKENLGSYASEYQARFILGYCSTYI 120

Query: 121 FMQSFMIPGTVFLSLLAGALFGVVRGLILVVFNATAGATACFFLSKLIGRPLVSWMWPEK 180
           FMQ+FMIPGT+F+SLLAGALFGVVRG +LVV NATAGA +CFFLSKL+GRPLV+W+WPEK
Sbjct: 121 FMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNATAGACSCFFLSKLVGRPLVNWLWPEK 180

Query: 181 LKLFQSEIAKQREKLLNYMVFLRITPTLPNIFINLASPIVDIPFHVFLLATLIGLVPSSY 240
           L+ FQ+EIAK+R++LLNYM+FLRITPTLPN+FINL+SPIVDIPFHVF LATL+GL+P+SY
Sbjct: 181 LRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFINLSSPIVDIPFHVFFLATLVGLMPASY 240

Query: 241 IMVRAGLALGDLKSVKDLYDFKTLTVLFFIGSLSVLPTLLKRKRTYE 270
           I VRAGLALGDL+SVKDLYDFKTL+VLF IGS+S+ P LLKRKR YE
Sbjct: 241 ITVRAGLALGDLRSVKDLYDFKTLSVLFLIGSISIFPALLKRKRVYE 287

[Close]

BLAST of Lsi03G004560 vs. TAIR10
Match: AT1G71940.2 (AT1G71940.2 SNARE associated Golgi protein family)

HSP 1 Score: 365.9 bits (938), Expect = 2.1e-101
Identity = 177/247 (71.66%), Postives = 219/247 (88.66%), Query Frame = 1


Query: 3   APRNLALKDEEKAEMNN----PAAKKMKSERYPFSRWGLAVALGSFLVYSAALFCIYRTM 62
           AP  +  +DEE   +++    P+ K+ K +R+P SRW LAV+LG FLV+S+ L CIY TM
Sbjct: 2   APTRILTRDEELGVISDDDDSPSGKRSKLDRFPLSRWELAVSLGVFLVFSSGLCCIYMTM 61

Query: 63  PAADFNNLKLPRSLADLRMLKDNLGSYAKDHPAQFILGYCSTYIFMQSFMIPGTVFLSLL 122
           PAA+F  LKLPRSLADLR+LKDNL +YA ++PAQF+LGYC+TYIFMQ+FMIPGT+F+SLL
Sbjct: 62  PAAEFGKLKLPRSLADLRLLKDNLANYANEYPAQFVLGYCATYIFMQTFMIPGTIFMSLL 121

Query: 123 AGALFGVVRGLILVVFNATAGATACFFLSKLIGRPLVSWMWPEKLKLFQSEIAKQREKLL 182
           AGALFGV +G++LVVFNATAGAT+CFFLSKLIGRPL++W+WP+KL+ FQ+EI+K+R+KLL
Sbjct: 122 AGALFGVFKGVVLVVFNATAGATSCFFLSKLIGRPLITWLWPDKLRFFQAEISKRRDKLL 181

Query: 183 NYMVFLRITPTLPNIFINLASPIVDIPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVK 242
           NYM+FLRITPTLPN+FINLASPIVD+PFHVF LATLIGL+P++YI VRAGLA+GDLKSVK
Sbjct: 182 NYMLFLRITPTLPNLFINLASPIVDVPFHVFFLATLIGLIPAAYITVRAGLAIGDLKSVK 241

Query: 243 DLYDFKT 246
           DLYDFKT
Sbjct: 242 DLYDFKT 248

[Close]

BLAST of Lsi03G004560 vs. TAIR10
Match: AT4G17790.1 (AT4G17790.1 SNARE associated Golgi protein family)

HSP 1 Score: 293.9 bits (751), Expect = 1.0e-79
Identity = 142/246 (57.72%), Postives = 193/246 (78.46%), Query Frame = 1


Query: 21  AAKKMKSERYPFSRWGLAVALGSFLVYSAALFCIYRTMPAADFNNLKLPRSLADLRMLKD 80
           A  K+ +  Y  S W +  A G  L +   L C+Y TMP +D++ LKLPR+L DL++L+D
Sbjct: 18  APAKLPTPIYSLSFWEVTAASGVVLGFILGLVCVYLTMPQSDYSFLKLPRNLEDLQILRD 77

Query: 81  NLGSYAKDHPAQFILGYCSTYIFMQSFMIPGTVFLSLLAGALFGVVRGLILVVFNATAGA 140
           NL  Y  D+  Q ++GYC  Y+FMQ+FMIPGTVF+SLLAGALFGVV+G+ LVV  ATAGA
Sbjct: 78  NLEIYTSDYTVQVLVGYCLVYVFMQTFMIPGTVFMSLLAGALFGVVKGMALVVSTATAGA 137

Query: 141 TACFFLSKLIGRPLVSWMWPEKLKLFQSEIAKQREKLLNYMVFLRITPTLPNIFINLASP 200
           ++C+FLSKLIGRPL+  +WP+KL  FQ ++A+++++LLNYM+FLR+TPTLPN FIN+ASP
Sbjct: 138 SSCYFLSKLIGRPLLFSLWPDKLVFFQDQVARRKDRLLNYMLFLRLTPTLPNTFINVASP 197

Query: 201 IVDIPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVKDLYDFKTLTVLFFIGSLSVLPT 260
           IVD+P+H+F LAT IGL+P++++ VRAGLALG+LKS+ DLYDF ++  L  IG LSV PT
Sbjct: 198 IVDVPYHIFFLATFIGLIPAAFVTVRAGLALGELKSLGDLYDFSSMATLCLIGVLSVTPT 257

Query: 261 LLKRKR 267
           L+ +K+
Sbjct: 258 LIGKKQ 263

[Close]

BLAST of Lsi03G004560 vs. TAIR10
Match: AT5G19070.1 (AT5G19070.1 SNARE associated Golgi protein family)

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-07
Identity = 62/232 (26.72%), Postives = 96/232 (41.38%), Query Frame = 1


Query: 35  WGLAVALGSFLVYSAALFCIYRTMPAADFNNLKLPRSLADLRMLKDNLGSYAKDHPAQFI 94
           WG A+ +   L+  AA+      +P                ++LKD L    +D      
Sbjct: 5   WGSALRISVLLILVAAIVLACYFLPVE--------------KLLKDFLLWVEQDLGPWGP 64

Query: 95  LGYCSTYIFMQSFMIPGTVFLSLLAGALFGVVRGLILVVFNATAGATACFFLSKLIGRPL 154
                 YI +    +P +V L+L  G LFG+  G +     AT G+ A F L + IG+P 
Sbjct: 65  FALAVAYIPLTVLAVPASV-LTLGGGYLFGLPIGFVADSVGATLGSGAAFLLGRTIGKPF 124

Query: 155 VSWMWPEKLK---LFQSEIAKQREKLLNYMVFLRITPTLPNIFINLASPIVDIPFHVFLL 214
           V      KLK    FQS      +      + LR+ P LP   +N    +  I    +LL
Sbjct: 125 VV----AKLKDYPQFQSVALAIEKSGFKICLLLRLAPLLPFSMLNYLLSVTPIRLGPYLL 184

Query: 215 ATLIGLVPSSYIMVRAGLALGDLKSVKDLY-DFKTLTVLFFIGSLSVLPTLL 263
           ++ +G++P +  +V  G  L DL  V   + +F      F I SL +   L+
Sbjct: 185 SSWLGMMPITLALVYVGTTLKDLSDVTHKWSEFSPGRWAFLISSLVISVILM 217

[Close]

BLAST of Lsi03G004560 vs. NCBI nr
Match: gi|778672991|ref|XP_011649906.1| (PREDICTED: uncharacterized membrane protein At4g09580 [Cucumis sativus])

HSP 1 Score: 488.4 bits (1256), Expect = 7.9e-135
Identity = 249/269 (92.57%), Postives = 259/269 (96.28%), Query Frame = 1


Query: 1   MAAPRNLALKDEEKAEMNNPAAKKMKSERYPFSRWGLAVALGSFLVYSAALFCIYRTMPA 60
           MAAPRNL L+DEEKAEMNNPAAKKMKSERYPFSRWGL VALGSFLVYSAALFCIYRTMPA
Sbjct: 1   MAAPRNLVLRDEEKAEMNNPAAKKMKSERYPFSRWGLTVALGSFLVYSAALFCIYRTMPA 60

Query: 61  ADFNNLKLPRSLADLRMLKDNLGSYAKDHPAQFILGYCSTYIFMQSFMIPGTVFLSLLAG 120
           ADF  +KLPRSLADLRMLKD+LGSYAKDH  +FILGYCSTYIFMQ+FMIPGTVFLSLL G
Sbjct: 61  ADFKYIKLPRSLADLRMLKDHLGSYAKDHTGRFILGYCSTYIFMQTFMIPGTVFLSLLGG 120

Query: 121 ALFGVVRGLILVVFNATAGATACFFLSKLIGRPLVSWMWPEKLKLFQSEIAKQREKLLNY 180
           ALFGVVRGL+LVVFNATAGATACFFLS LIGRP VSWMWPEKLK FQSEIAKQREKLLNY
Sbjct: 121 ALFGVVRGLVLVVFNATAGATACFFLSNLIGRPFVSWMWPEKLKTFQSEIAKQREKLLNY 180

Query: 181 MVFLRITPTLPNIFINLASPIVDIPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVKDL 240
           M+FLRITPTLPNIFINLASPIVDIPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVKDL
Sbjct: 181 MIFLRITPTLPNIFINLASPIVDIPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVKDL 240

Query: 241 YDFKTLTVLFFIGSLSVLPTLLKRKRTYE 270
           YDFKTLT+LFFIGSLS+LPTLLKRK+TYE
Sbjct: 241 YDFKTLTLLFFIGSLSILPTLLKRKQTYE 269

[Close]

BLAST of Lsi03G004560 vs. NCBI nr
Match: gi|659081237|ref|XP_008441226.1| (PREDICTED: uncharacterized membrane protein At4g09580 [Cucumis melo])

HSP 1 Score: 482.6 bits (1241), Expect = 4.4e-133
Identity = 244/269 (90.71%), Postives = 258/269 (95.91%), Query Frame = 1


Query: 1   MAAPRNLALKDEEKAEMNNPAAKKMKSERYPFSRWGLAVALGSFLVYSAALFCIYRTMPA 60
           MAAPRNLAL+DEEKA+MNNPA KKMK E+YPFSRWGL VALGSFLVYSAALFCIYRTMP 
Sbjct: 1   MAAPRNLALRDEEKADMNNPATKKMKFEKYPFSRWGLTVALGSFLVYSAALFCIYRTMPP 60

Query: 61  ADFNNLKLPRSLADLRMLKDNLGSYAKDHPAQFILGYCSTYIFMQSFMIPGTVFLSLLAG 120
           ADF  +KLPRSLADLRMLKD+LGSYAKDHP +F+LGYCSTYIFMQ+FMIPGTVFLSLL G
Sbjct: 61  ADFKYIKLPRSLADLRMLKDHLGSYAKDHPGRFVLGYCSTYIFMQTFMIPGTVFLSLLGG 120

Query: 121 ALFGVVRGLILVVFNATAGATACFFLSKLIGRPLVSWMWPEKLKLFQSEIAKQREKLLNY 180
           ALFGV RGLILVVFNATAGATACFFLS LIGRP VSWMWPEKLK+FQSEIAKQREKLLNY
Sbjct: 121 ALFGVARGLILVVFNATAGATACFFLSNLIGRPFVSWMWPEKLKIFQSEIAKQREKLLNY 180

Query: 181 MVFLRITPTLPNIFINLASPIVDIPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVKDL 240
           M+FLRITPTLPNIFINLASPIV+IPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVKDL
Sbjct: 181 MIFLRITPTLPNIFINLASPIVNIPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVKDL 240

Query: 241 YDFKTLTVLFFIGSLSVLPTLLKRKRTYE 270
           YDFKTLT+LFFIGSLS+LPTLLKRK+TYE
Sbjct: 241 YDFKTLTLLFFIGSLSILPTLLKRKQTYE 269

[Close]

BLAST of Lsi03G004560 vs. NCBI nr
Match: gi|659124036|ref|XP_008461958.1| (PREDICTED: uncharacterized membrane protein At4g09580-like [Cucumis melo])

HSP 1 Score: 416.4 bits (1069), Expect = 3.8e-113
Identity = 209/270 (77.41%), Postives = 243/270 (90.00%), Query Frame = 1


Query: 1   MAAPRNLALKDEEKA-EMNNPAAKKMKSERYPFSRWGLAVALGSFLVYSAALFCIYRTMP 60
           MAA RN+ ++DEEK  E ++P AKK K ER+P ++W LA ALG FL+ S  L C+Y TMP
Sbjct: 1   MAASRNVGMRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLLCSTGLLCVYLTMP 60

Query: 61  AADFNNLKLPRSLADLRMLKDNLGSYAKDHPAQFILGYCSTYIFMQSFMIPGTVFLSLLA 120
           +A++ ++KLPR+L+DLR+LKD   +YAKDHPAQFILGYCSTYIFMQ+FMIPGT+F+SLLA
Sbjct: 61  SAEYQSVKLPRTLSDLRVLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLA 120

Query: 121 GALFGVVRGLILVVFNATAGATACFFLSKLIGRPLVSWMWPEKLKLFQSEIAKQREKLLN 180
           GALFGV+RGL+LVVFNATAGA++CFFLSKLIGRPLV WMWPEKLKLFQ+EIAK REKLLN
Sbjct: 121 GALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKLFQAEIAKHREKLLN 180

Query: 181 YMVFLRITPTLPNIFINLASPIVDIPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVKD 240
           YM+FLRITPTLPN+FINLASPIVDIPFHVF LATLIGLVP+SYI VRAGLALG+LKSVKD
Sbjct: 181 YMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGELKSVKD 240

Query: 241 LYDFKTLTVLFFIGSLSVLPTLLKRKRTYE 270
           LYDFKTL+VLFFIG +S+LPTLLKRKR YE
Sbjct: 241 LYDFKTLSVLFFIGFISILPTLLKRKRVYE 270

[Close]

BLAST of Lsi03G004560 vs. NCBI nr
Match: gi|449463384|ref|XP_004149414.1| (PREDICTED: uncharacterized membrane protein At4g09580 [Cucumis sativus])

HSP 1 Score: 416.0 bits (1068), Expect = 5.0e-113
Identity = 209/270 (77.41%), Postives = 243/270 (90.00%), Query Frame = 1


Query: 1   MAAPRNLALKDEEKA-EMNNPAAKKMKSERYPFSRWGLAVALGSFLVYSAALFCIYRTMP 60
           MAA RN+ ++DEEK  E ++P AKK K ER+P ++W LA ALG FL+ S  L C+Y TMP
Sbjct: 1   MAASRNVGMRDEEKLKEDDSPTAKKPKFERFPLTKWELAAALGIFLLCSTGLVCVYLTMP 60

Query: 61  AADFNNLKLPRSLADLRMLKDNLGSYAKDHPAQFILGYCSTYIFMQSFMIPGTVFLSLLA 120
           +A++ ++KLPR+L+DLR+LKD   +YAKDHPAQFILGYCSTYIFMQ+FMIPGT+F+SLLA
Sbjct: 61  SAEYQSVKLPRTLSDLRVLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLA 120

Query: 121 GALFGVVRGLILVVFNATAGATACFFLSKLIGRPLVSWMWPEKLKLFQSEIAKQREKLLN 180
           GALFGV+RGL+LVVFNATAGA++CFFLSKLIGRPLV WMWPEKLKLFQ+EIAK REKLLN
Sbjct: 121 GALFGVIRGLLLVVFNATAGASSCFFLSKLIGRPLVYWMWPEKLKLFQAEIAKHREKLLN 180

Query: 181 YMVFLRITPTLPNIFINLASPIVDIPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVKD 240
           YM+FLRITPTLPN+FINLASPIVDIPFHVF LATLIGLVP+SYI VRAGLALG+LKSVKD
Sbjct: 181 YMLFLRITPTLPNLFINLASPIVDIPFHVFFLATLIGLVPASYITVRAGLALGELKSVKD 240

Query: 241 LYDFKTLTVLFFIGSLSVLPTLLKRKRTYE 270
           LYDFKTL+VLFFIG +S+LPTLLKRKR YE
Sbjct: 241 LYDFKTLSVLFFIGFISILPTLLKRKRVYE 270

[Close]

BLAST of Lsi03G004560 vs. NCBI nr
Match: gi|566200755|ref|XP_006376293.1| (hypothetical protein POPTR_0013s11730g [Populus trichocarpa])

HSP 1 Score: 412.1 bits (1058), Expect = 7.2e-112
Identity = 201/264 (76.14%), Postives = 240/264 (90.91%), Query Frame = 1


Query: 7   LALKDEEKA-EMNNPAAKKMKSERYPFSRWGLAVALGSFLVYSAALFCIYRTMPAADFNN 66
           L ++DEEKA E ++P+AK+ K ER+P +RW LA ALG FLV+S  LFCIY TMPAAD+  
Sbjct: 21  LTMRDEEKAKEDDSPSAKRSKFERFPLTRWELAAALGVFLVFSTGLFCIYLTMPAADYGK 80

Query: 67  LKLPRSLADLRMLKDNLGSYAKDHPAQFILGYCSTYIFMQSFMIPGTVFLSLLAGALFGV 126
           LKLPRS++DLR+LKDNL +Y  ++PAQFILGYCSTYIFMQ+FMIPGT+F+SLLAGALFG+
Sbjct: 81  LKLPRSISDLRLLKDNLATYVSEYPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGI 140

Query: 127 VRGLILVVFNATAGATACFFLSKLIGRPLVSWMWPEKLKLFQSEIAKQREKLLNYMVFLR 186
           VRGL LVVFNATAGA++CFFLSKLIGRPLV+W+WPEK++ FQSEIAK++EKLLNYM+FLR
Sbjct: 141 VRGLFLVVFNATAGASSCFFLSKLIGRPLVNWLWPEKMRFFQSEIAKRKEKLLNYMLFLR 200

Query: 187 ITPTLPNIFINLASPIVDIPFHVFLLATLIGLVPSSYIMVRAGLALGDLKSVKDLYDFKT 246
           +TPTLPN+FINLASPIVDIPFH+F LATL+GL+P+SYI V+AGLALGDLKSVKDLYDFKT
Sbjct: 201 VTPTLPNLFINLASPIVDIPFHIFFLATLLGLIPASYITVKAGLALGDLKSVKDLYDFKT 260

Query: 247 LTVLFFIGSLSVLPTLLKRKRTYE 270
           L+VLF IGS+S+ PTLLKRKR YE
Sbjct: 261 LSVLFLIGSISIFPTLLKRKRIYE 284

The following BLAST results are available for this feature:

BLAST of Lsi03G004560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y4958_ARATH	2.4e-107	68.99	Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana GN=At4g09580 ...	[more]
TM41_DICDI	5.3e-46	40.43	Transmembrane protein 41 homolog OS=Dictyostelium discoideum GN=DDB_G0275543 PE=...	[more]
TM41_DROME	9.6e-40	34.36	Transmembrane protein 41 homolog OS=Drosophila melanogaster GN=stas PE=2 SV=2	[more]
TM41B_XENLA	4.8e-39	34.78	Transmembrane protein 41B OS=Xenopus laevis GN=tmem41b PE=2 SV=1	[more]
TM41B_HUMAN	8.1e-39	35.17	Transmembrane protein 41B OS=Homo sapiens GN=TMEM41B PE=1 SV=1	[more]

BLAST of Lsi03G004560 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSW5_CUCSA	5.5e-135	92.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G402630 PE=4 SV=1	[more]
A0A0A0K623_CUCSA	3.5e-113	77.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G273650 PE=4 SV=1	[more]
U5FSV4_POPTR	5.0e-112	76.14	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s11730g PE=4 SV=1	[more]
M5XU81_PRUPE	8.6e-112	75.00	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009809mg PE=4 SV=1	[more]
B9IQJ1_POPTR	3.3e-111	75.19	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s11320g PE=4 SV=2	[more]

BLAST of Lsi03G004560 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G09580.1	1.4e-108	68.99	SNARE associated Golgi protein family	[more]
AT1G71940.2	2.1e-101	71.66	SNARE associated Golgi protein family	[more]
AT4G17790.1	1.0e-79	57.72	SNARE associated Golgi protein family	[more]
AT5G19070.1	1.8e-07	26.72	SNARE associated Golgi protein family	[more]

BLAST of Lsi03G004560 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778672991\|ref\|XP_011649906.1\|	7.9e-135	92.57	PREDICTED: uncharacterized membrane protein At4g09580 [Cucumis sativus]	[more]
gi\|659081237\|ref\|XP_008441226.1\|	4.4e-133	90.71	PREDICTED: uncharacterized membrane protein At4g09580 [Cucumis melo]	[more]
gi\|659124036\|ref\|XP_008461958.1\|	3.8e-113	77.41	PREDICTED: uncharacterized membrane protein At4g09580-like [Cucumis melo]	[more]
gi\|449463384\|ref\|XP_004149414.1\|	5.0e-113	77.41	PREDICTED: uncharacterized membrane protein At4g09580 [Cucumis sativus]	[more]
gi\|566200755\|ref\|XP_006376293.1\|	7.2e-112	76.14	hypothetical protein POPTR_0013s11730g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR015414	TMEM64

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G004560.1	Lsi03G004560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015414	Transmembrane protein TMEM64/TMEM41	PANTHER	PTHR12677	UNCHARACTERIZED	coord: 28..262 score: 3.9E
None	No IPR available	PANTHER	PTHR12677:SF29	SUBFAMILY NOT NAMED	coord: 28..262 score: 3.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi03G004560	Csa2G402630	Cucumber (Chinese Long) v2	culsiB115
Lsi03G004560	CSPI02G24990	Wild cucumber (PI 183967)	cpilsiB113
Lsi03G004560	Cucsa.088290	Cucumber (Gy14) v1	cgylsiB098
Lsi03G004560	CmaCh15G000360	Cucurbita maxima (Rimu)	cmalsiB276
Lsi03G004560	CmoCh15G000350	Cucurbita moschata (Rifu)	cmolsiB265
Lsi03G004560	Cla011905	Watermelon (97103) v1	lsiwmB275
Lsi03G004560	MELO3C008124	Melon (DHL92) v3.5.1	lsimeB259
Lsi03G004560	ClCG11G008100	Watermelon (Charleston Gray)	lsiwcgB227
Lsi03G004560	MELO3C008124.2	Melon (DHL92) v3.6.1	lsimedB272
Lsi03G004560	Cla97C11G215420	Watermelon (97103) v2	lsiwmbB224
Lsi03G004560	Bhi04G002052	Wax gourd	lsiwgoB322
Lsi03G004560	Cp4.1LG13g11510	Cucurbita pepo (Zucchini)	cpelsiB143
Lsi03G004560	CsGy2G024710	Cucumber (Gy14) v2	cgyblsiB102
Lsi03G004560	Carg22862	Silver-seed gourd	carlsiB986
Lsi03G004560	CsaV3_2G033510	Cucumber (Chinese Long) v3	cuclsiB127

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G004560	Cucurbita maxima (Rimu)	cmalsiB656
Lsi03G004560	Cucurbita moschata (Rifu)	cmolsiB645
Lsi03G004560	Cucurbita pepo (Zucchini)	cpelsiB339
Lsi03G004560	Silver-seed gourd	carlsiB017