Lsi03G004480 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi03G004480
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr03 : 5084992 .. 5085510 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGAATAACCTAGCTTTCACTGATAGAGACACTACTCCCGAGGAGAATCGCCCTTCTCAACACCAATGTCATCGTGATTCGCCTCATTTGCTTACTTTTAACGGTCCCTTCCAAGCCCCTAGCAATACTATTGTTGCTTTAGATGCATCGCTTGCCACTTGGAAGAGCGTACCTGGCCAACCTTCCCTAGAGGGTTGGAACAACCCCCAACAAAGCATGACGAATAGCTTACTTCACTTTCGAGAGGTAAACTTGATTTCTTGCCTCTGTTGTGCTTTTGTATTTATCTTTCTAACCATATTGTTTGCACAGGGCTATGTGAGCTTGATATTGGCAGCTCAACGAATGACTTCTGAGCTCAACTATCTTCATACAAACTCAATACCTCTAAAGAAACACGAGCAATTGCAGAATTGTAGCACCAATTCTACTAAATCATTGCTTCACGCAGAAGAACTAGTCTCATCTCTTCAGGCCAAACTGGAGAAGTCTGAGAGTAGCCTAGCTATCACCTAA

mRNA sequence

ATGTCGAATAACCTAGCTTTCACTGATAGAGACACTACTCCCGAGGAGAATCGCCCTTCTCAACACCAATGTCATCGTGATTCGCCTCATTTGCTTACTTTTAACGGTCCCTTCCAAGCCCCTAGCAATACTATTGTTGCTTTAGATGCATCGCTTGCCACTTGGAAGAGCGTACCTGGCCAACCTTCCCTAGAGGGTTGGAACAACCCCCAACAAAGCATGACGAATAGCTTACTTCACTTTCGAGAGGGCTATGTGAGCTTGATATTGGCAGCTCAACGAATGACTTCTGAGCTCAACTATCTTCATACAAACTCAATACCTCTAAAGAAACACGAGCAATTGCAGAATTGTAGCACCAATTCTACTAAATCATTGCTTCACGCAGAAGAACTAGTCTCATCTCTTCAGGCCAAACTGGAGAAGTCTGAGAGTAGCCTAGCTATCACCTAA

Coding sequence (CDS)

ATGTCGAATAACCTAGCTTTCACTGATAGAGACACTACTCCCGAGGAGAATCGCCCTTCTCAACACCAATGTCATCGTGATTCGCCTCATTTGCTTACTTTTAACGGTCCCTTCCAAGCCCCTAGCAATACTATTGTTGCTTTAGATGCATCGCTTGCCACTTGGAAGAGCGTACCTGGCCAACCTTCCCTAGAGGGTTGGAACAACCCCCAACAAAGCATGACGAATAGCTTACTTCACTTTCGAGAGGGCTATGTGAGCTTGATATTGGCAGCTCAACGAATGACTTCTGAGCTCAACTATCTTCATACAAACTCAATACCTCTAAAGAAACACGAGCAATTGCAGAATTGTAGCACCAATTCTACTAAATCATTGCTTCACGCAGAAGAACTAGTCTCATCTCTTCAGGCCAAACTGGAGAAGTCTGAGAGTAGCCTAGCTATCACCTAA

Protein sequence

MSNNLAFTDRDTTPEENRPSQHQCHRDSPHLLTFNGPFQAPSNTIVALDASLATWKSVPGQPSLEGWNNPQQSMTNSLLHFREGYVSLILAAQRMTSELNYLHTNSIPLKKHEQLQNCSTNSTKSLLHAEELVSSLQAKLEKSESSLAIT
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
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The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G004480.1Lsi03G004480.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 126..146
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None