Lsi03G004400 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G004400
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Albugo candida WGS project CAIX00000000 data, strain Ac Nc2, contig AcNc2_CONTIG_58_length_100122
Location	chr03 : 4943620 .. 4951017 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGTAATTTTCTTTTATTTTCCCCCAAAATATATAAATAAATAATAATTCACATTTTGAATTGGCCGCGTCTTGGGCTTTGAATTATACAGTAGAAAAGAGACAAAAATTCTCCAAAGCTCAATTGACCAATCACAGAGTCTTCTCTTCCGCGAGGCAGCTTCCAATTTTCAGAACTTTCTTTGTTTTTTTTTTCAGAAATTTCTTTCTAAACGCCCATTGGCCCTCTGACATTTCAACGAAAAGTGGAACCCAAAGTTTCTCCTTCTCCCGTTTTGAATCGTCTCTTTGACTGATTAGCTCCAGCATTTGTCCTGTGGAGCCACTGAATTTCTGTTTAATCGACCAAAAGGCTGAGAGATTGAAAGAGAATGCCGAATTGGGAGCTTAGGAATTGCTGTCAGCATGATCAGGTTGTGTTCTTAGTTACGATTGGGGTGTTCACCGTTGTAATCCTCGCAGTAAGCTTCGCCGGACTCTTTCTATTGCGTTTTTTTTATAATTATTTTTTAAGCTCGTTTTAAGTTGTAGATTTGTATGATTTCCGGAAGTAGGATTGGTTTTTAAGTTCGTGTTAGATGCTGAGAAGTAAACTGTTTAAGCAGACTTAGGTCTTCGTTATCTATGAAATTCATGATGGCTCTTCCTCGTTATCAAATCATCATTTAAGATTGCGTTCTCCTCTGCACAAAAATCTACATGAACTTGAGTATTTCTTGTTAATCATCTTAAACAGCATGTTTGAGTTATGTAGGTGGTTAAGTATTTGAAGAACTCAAATTGAGGTTGGAGAGATAAAGAGAGAGATTTTAGGTTAATTGACATTAAATACCCGCGGACAGATACAGATCGGAACAATAGGCTTGGACTGAGTGCAGATATTCAATTTCTGAAGAACTCAGTTTCCTTCATGTTTTATCGTAGTCTTTGTTTGACATGTTTTCCAACCTCTCAAACAGCCTTTCTTTTCCCTAAATTAGATATCTGATTTAGTTAGAGAGCATATGAACTTGGATTGAACTTCCTAGGTGTGTAAGTTGTGTCTAATACTAGTAACTTTTGGATTCTGATTAAAAAAAAAAAAGTACAGATGTTTTCTTGAGTATTCTTGAGGTGGAATCCTTATTGTGCATCACAGCTGAGCAAGCTTTTCTTGCCTTCATTATTTGCTCGATGAATATTGATTTTTTCCCTCTGAATGTGACAGCTATGGAGGACATTTATAATCACTCCTTTTAAGCTCATTACTGTTTTCCTGCATGAAGCAAGTCATGCAATAGCTTGTAAGCTTACCTGTGGTGAGGTATATGCCTTTTCTTCATTTCTATTTGCTATGGTGATTGAAATGGAACAGATTGCGTTGGCATTATTTTATTTTCTTATATAACAAGAAATATCATATTTATACTCCAATTATAAACTTTTTTTTATCTGGCTACGCCTTTACTGTAATGGTCATAGGGCATAGTGAAAGAAACATGATGTTCTCTGCATATTTCTTATCGTGTTTTGAGTTTGTTACCAATGTAGTTTATTTCTAAAGTTCTAAGATAACGTGCCTTGACACTTCTTTCTGTCTAAAAAAATTATCCTACATCGTTCTTTTTCTCTCTTTTATGGCGTTTACAAAAAGGCTCTTCCTAGAGATGTTGGCAACAAACGAGTCATAGCTATAAAAGAGTATAGAAGGTTACAATAAGAAGTAAAAACTGTGTTAAATTGCCATTTCCTCCCAAACTTTCTCGTTTCTTCACACCCTGAAGTTTCTTTCTTTCCTAATTGACCAAAGGATGCTCTTGAGTTCCGTCGCCCAAATAGGGTGACGCTAATTGTTGAAGGATTTGCCAATGTGGGAGGTTGAAGTAAACAATCCAATCCTTTGTTCTGTTGTGAAGGTTTTAGGATCAATTGAACTCGATAAAAATTTCATTCTGAAAGACGGCAATTGTTTTCTTAGCTTTCTTACAAAGGAGGCTGATATTAGGCTAGAAGACTACTTTTGCTGGACCACTTCAATACCCAGTCCTAGATTTAATTGCTTATATTTCTTACCAGTAATCTCAAGTGAAAATTGTCAAAGTAGAACAAAACAATTATAAGAATAATAGAAAATCATATTAGGTGCGCTGCAAATCATGTTGAAGCCTCATTAACAAGGAAATATTTGAGATGTCTAGAGGCATCTTGACAGATTTTTTTGCGGAATTCCTTTAATTAAGCATCATCATTTTAAATTTTTTCGTAGTAAGATTAGGTGTGTTAATGATATAAGATCAATAAACAAGATATCCATGAGAGTTGGCTTTATCAATCAATCTGTTAAAAGTAGTTTATTAACCGACATTGCTTTCTTTTGTTACATTACACGTGCCTACTTTGTTAGTTATCCTTATCCCCAACTTGTTGTATGAATTGTATTTAGTTTCATTATATGGGAGGCTGAAGGTGAGACTCAAAAAGATATGTATCTGGTGTTCTTTTTCAATAAGATTCTTCTGCTGCCACTAGATGTAGAATATGAATTTGCTATCAGGACCACTGAGATATCCGTGCATTCCAATTTGGGTTTTAGGTTCTTTGAGGTGCCGGTGGGGGTCTCACATTATCCTATTTCTCAGATTCTCTCCATCTTCTCCTATTCAAGTTAACTGGCCCATATTTTGAGAAATTTCCACTAAACATTCATTCATGCCATCTTCTTACCTTAAACACAAGGCATCTTCACTGCTAAATTGTATACTATGCTATGTTCATTGCTATGGTACAGTTACCTATTCCATCAATTACCCACGTGTGGATATCTTGGTAGTTCATGAAACCCTTAAATAGTGATCTGGCCTTAAGTTCAATTTTTGAAGTCAATATGCTATCTCTTTAAAGATATCCTTGGTTTGTGATTAATGAACCTAGAGGAAGTTGATATAAGCAGTTTATTTGCAGGTGGAAGGAATCCAGGTTCATGCAAACGAGGGAGGGGTAACTCAAACCCGTGGTGGTGCTTATTGGTTGATTTTGCCTGCAGGATGTAATTCTCTTATTTCATTTTTTTACAATTCCCTGATAAGCAATAAGATTTACAGAAAAGCATACATATGCTGACAATATAAATTAATTGTAAAACTCACTAAAGTTACTACAAGTTATCCACCATGCCACTCGCCCCTACCATCTTCCAGTAGATGAATGAGAGTTTCAAGTTCATCTTAAATAAGATTATTTTAGTTTCCTTAGACAACTACTTGTGTACAGTCATACTTTGGAAAAACATTTAGAACATTAAAGGTGTAGTTTAGTTTGAAATGTTCTGTAAATTTCTACTTTGTGGAACTGCCACTTATTTTATTTTTTCGTTCACTTCAACCTAGATCTTGGATCATCGTTTTGGGGAATGGCTATGATTCTCGCATCAACCAATCTTCTCACTGCTAGGATTGCAGCGGGTTGTTTGGGTTTAGCTCTTCTTGTTGTACTCTTCATTGCAAAAAATGTAAGGAAAATAATGAGCAAGAAATGATTTTACTATACATTTTTTATCATTATCAATTTCTTACCTCCCTTTTATACTTTTGTCAGTGGACGCTTAGAGGACTCTGTATTGGTAAGTGTTCCCATGATCTTTTCGTAGGAACTGGAGTTTACATAAAGCCACTTTTGTTGCTCTTAATATTGACATTCACCAACTGAATACCTCAGGATTTATTATTTTCCTTGCGGTGGTTTGGGTTCTACAAGAAACGACTACAGTTCGCATACTTCGTTATGTCATTCTTTTCATTGGTATACATTAAAGCTTGCAATAGCTTTCCTGTTCTTTTAGTGGATATCATTTTATCGTTTATTAATTTACATATATTTTCCTCACTGGATAATTCTTTTATATTGATGTTTTGCAGGGGTCATGAACAGCTTGTTTTCGGTTTACGGTATATTTATAATCTCTCTATAAATATGATAACATTACTAGAAATCTAGAATGTTAATGCTGAAAATCATAAGTTTATCCTCCCTAACTCATGCAGATATATATGATGATTTGATTTCACGAAGAGTCAACTCGAGCGATGCTGAGAAGTTTGCAGAACTGTGTCCATGCCCTTGTAATGGAATTGGATGGGGAGTCATATGGTAATTAACATCTCAATCTTTGGGACAACATTGACACAGATACCTAATCATGCATTGCACTATAAAAGGAAATGGAATATTTTCCAAAAGTTTTAATTTTGATAATATCATTACAGAAGGTTGATATGTCAAGATGTTTATGATTTCGTATCAATTCTCCACTCATCCCATCTCCTAATTGAAATGCTGATATGTCAAGATGTTCATGATTGCATATCAAAACTCCACTCATCCATTTCATAATTTGAATGATCATTTTTGCAGGGGAATGATATCATTTATCTTCTTATGTGCATCTATCTATCTTGGTCTTGTCATCCTATCTTAAGGTACATGAACATCTCCAACCTATTGATTTCCTCTCGTTTAATTGCGATTTTAACATTCAATATCTCGGTTTATATTCATCTCTCGGTCTTCTTGTCCTACAAAGTGTATAGCATAGTTATTTAAAATAGATATATTGATTTTAACTATGATGCACTTGTAAAGAAACTTGCACACAGGGGATATAGTTACAGTTTCAATAGTTAATTGCAAAATTCATATGGCTTTCTTGGGTCAACAAATTTAATAAACTTAGAGTATCAATGGTAACAATTTAATGGTGCTCTTCCATTCGTGTGTGACACACGATTACCTCTAGAGATTAGTTAGTCAAAACTATGCATTTTAAGATGATAGATTTTTTTATTCATTCGTCAATCCAAACGTAGCTTGATGTATAAGGACACCAATTATCATCTCAAAAGCCAATAATTTGATTATCCAACTTCCATCATATGATGATGCTATTTTATGTTGATAATAAATTGTTACCATTTAAATATCAGCTTTAATTTCATTATCAGGTTCAGGTTTAAATTGTGAGTATTGACACTTGAAATTGCTAGCGTTCTTGTTGGCTGTCTTGGCGTATCCGCAAAGCTTTTATACTTTGGAGTTTGGAGAAAGCTCTGTTGTTCTAACCATGCTGACTCCCAGCCTTGAATTTTACATATATTCTGTACAAAATTGAACTCTCATATTCTTTATTCCCTTTTATTTATTTTTTCAATTATAAACCTGCCAAATTTAATTATTGGATACATCTGCAAATGTGCAATGTTTATTTAAATTTTGGTTAGACAACCATTTTAGTACCTATGACTTCTGCTTTTGATTTAGTTCCAACTCTTCTAGATTTAGAAGTTTCATTATAATCTCTATAGTTTAGTACATTATCCTTATAGCCAGGGGCGGATTTAGTGCCCTAGAAGGGACTCGAGCCCCCCTCAACTTTATGCTCTTTAAATAATATCAATACCATTAGCTAGTCCAGTGGTAAATCTGTCCTTCAGCCCCCTCTAGACCTAGGTTCAAGCCCCACTCTTTACACTGAACTATAAAGCTCCCTGTCAACATTAATTTCTGGATACGCCACTGCTCATAGCAATTCTAGGTATTTACACTTCTCTTATTATCTTCTTCCTAATAATTTTATAAATATTTTGAAAATATATGTAAGAAAGTTCGTATATATGACAACTACAGATGAAGCACAACTATTTATCTACACATCAAGGTGTTTGAGTACCTTTTACACTCAGAACATGAAGCAATAAACACTAAATATATTTAGAATATTACCTTTTGTTGTGGGTTGTCAATTAAGGCTTCATGATGCTAAGAAGTTATCAACCTTAACATTTGTAGTACTTGATAGAAACTTCATGCAAATGGGAGGCTTAACTCCAGCCAGAGCAAGGATGGAGCTGGGCAATGTCCATAATCCATCTCCACATATCAGACCAGACGCCACTGCAGGTGCAAACGCCTCGGCCTTGGCCTTGTTGATCTTTTCCCACACAAACAATATCAAGCTTCCAAGGCACATGTCAATGGCGAAATATGGGCCCATATAGAATGGAATTGCCATTGCTGTAGGTATTGGAATATACTGACTTACCTTCTTCCCTGATAAGTCTCTTATCAAATTTATCACAATGGCTGCTGCAAAGAACACATAGCATAGGGAGAGACAGTTCTTTGGGAGACTAGAGAAGCCCTCAACTGCGAGAAGAGCCATGTTACGGTAGACAGTTGCATAAGGTGCTGGATATGCACTTTCAGGCTGTCCAAGGTCATCAAATGCCTTGTAGAACAGCCAAAATACGCAGGGAGATATGATGCATCCCATCGCAGTGCCTACCACCTGGCTCACGAACATCGACCGCGGCGAAGATAGTGTCATGTATCCAGTCTTGAAATCCTGCATTAGATCAGATGCAGTTGAGACAATGTTCATCATTACTCCGCAAGCTGCTAAGCTTGCATTGACTCCACCATGCGTGGTAGTAGCACCGGCCCATGCCCCGATCGTGAAGATGACAAGCTTTCCATACGCAGACGCAAGGGACCAATCAGTCAACCCGGTACCATAAGAATTGCAGAAAGCTAGTACTGGTGCAATCACATAGAGGACAAGTATGTAATACCATTTCAACGACGAAAAAATGTGTGGCAAAGTATCTCCAAACAAGTAATACAACTTTAGCAACGGAAGGATGTGTGGCAAAGTGGCTATAGATACAACAGCAAGTATAACATAACCTCCAATGGCAAACCACGACGGAATCTGTTCTTTGAGGAAGAGTCGAGCCCTCCGGTTGTCATCGAAAGATACGCCAGAGGTCGAATGGAGGGAAGGATCCGAAACTACAATTACATCTTTCTTTTTCAGCTGAGACAAACGTATGAGAGTGGTTGCCAACACCTTTACAAAGTTATAAATCCCATCTCCCAGAGTCAAAGCAATGAGAAAAAGCACCTGTAGTATAGCCAGCCACAAACAGAAACAGAATTATAAAGCAACAAGTAAATATTGGAATTGTATGAACAATTTAAGGCTTTTTCTTTTTTTTTTTGGACCTTGTAGCCTTGAAGACCACGAAAGCTGGAGAGGGGAAGGTCAGCATTGAACCAATCTCCTTTTCTTTTCTCAATGAGAGGCCACATTAAACCCCATGAAAGGATTGCTCCAATCAACACAGAAATGTTAATGGTGTACGGACAAATCATTCCTACCCCAACATATGTTGCAGAAAAATCAAAATAAAATCTGCAGCAAGAAATGAGTGTTTTATTTATTTTATCATTATATATTATTAATTAAGTCTATCGAACTCGAACTCGAACTCGAACACCGTGTTAATTGATAGGAAGGAGGCATAAAAAAGTAGTACTCGTATTGATAAGCTTTGAGGCCAAATGTAGGGAAACTTTTAAATCCAC

mRNA sequence

CAGGTAATTTTCTTTTATTTTCCCCCAAAATATATAAATAAATAATAATTCACATTTTGAATTGGCCGCGTCTTGGGCTTTGAATTATACAGTAGAAAAGAGACAAAAATTCTCCAAAGCTCAATTGACCAATCACAGAGTCTTCTCTTCCGCGAGGCAGCTTCCAATTTTCAGAACTTTCTTTGTTTTTTTTTTCAGAAATTTCTTTCTAAACGCCCATTGGCCCTCTGACATTTCAACGAAAAGTGGAACCCAAAGTTTCTCCTTCTCCCGTTTTGAATCGTCTCTTTGACTGATTAGCTCCAGCATTTGTCCTGTGGAGCCACTGAATTTCTGTTTAATCGACCAAAAGGCTGAGAGATTGAAAGAGAATGCCGAATTGGGAGCTTAGGAATTGCTGTCAGCATGATCAGGTTGTGTTCTTAGTTACGATTGGGGTGTTCACCGTTGTAATCCTCGCACTATGGAGGACATTTATAATCACTCCTTTTAAGCTCATTACTGTTTTCCTGCATGAAGCAAGTCATGCAATAGCTTGTAAGCTTACCTGTGGTGAGGTATATGCCTTTTCTTCATTTCTATTTGCTATGGTGGAAGGAATCCAGGTTCATGCAAACGAGGGAGGGGTAACTCAAACCCGTGGTGGTGCTTATTGGTTGATTTTGCCTGCAGGATATCTTGGATCATCGTTTTGGGGAATGGCTATGATTCTCGCATCAACCAATCTTCTCACTGCTAGGATTGCAGCGGGTTGTTTGGGTTTAGCTCTTCTTGTTGTACTCTTCATTGCAAAAAATTGGACGCTTAGAGGACTCTGTATTGGATTTATTATTTTCCTTGCGGTGGTTTGGGTTCTACAAGAAACGACTACAGTTCGCATACTTCGTTATGTCATTCTTTTCATTGGGGTCATGAACAGCTTGTTTTCGGTTTACGATATATATGATGATTTGATTTCACGAAGAGTCAACTCGAGCGATGCTGAGAAGTTTGCAGAACTGTGTCCATGCCCTTGTAATGGAATTGGATGGGGAGTCATATGGGGAATGATATCATTTATCTTCTTATGTGCATCTATCTATCTTGGTCTTGTCATCCTATCTTAAGGTTCAGGTTTAAATTGTGAGTATTGACACTTGAAATTGCTAGCGTTCTTGTTGGCTGTCTTGGCGTATCCGCAAAGCTTTTATACTTTGGAGTTTGGAGAAAGCTCTGTTGTTCTAACCATGCTGACTCCCAGCCTTGAATTTTACATATATTCTGTACAAAATTGAACTCTCATATTCTTTATTCCCTTTTATTTATTTTTTCAATTATAAACCTGCCAAATTTAATTATTGGATACATCTGCAAATGTGCAATGTTTATTTAAATTTTGGTTAGACAACCATTTTAGTACCTATGACTTCTGCTTTTGATTTAGTTCCAACTCTTCTAGATTTAGAAGTTTCATTATAATCTCTATAGTTTAGTACATTATCCTTATAGCCAGGGGCGGATTTAGTGCCCTAGAAGGGACTCGAGCCCCCCTCAACTTTATGCTCTTTAAATAATATCAATACCATTAGCTAGTCCAGTGGTAAATCTGTCCTTCAGCCCCCTCTAGACCTAGGTTCAAGCCCCACTCTTTACACTGAACTATAAAGCTCCCTGTCAACATTAATTTCTGGATACGCCACTGCTCATAGCAATTCTAGTACTTGATAGAAACTTCATGCAAATGGGAGGCTTAACTCCAGCCAGAGCAAGGATGGAGCTGGGCAATGTCCATAATCCATCTCCACATATCAGACCAGACGCCACTGCAGGTGCAAACGCCTCGGCCTTGGCCTTGTTGATCTTTTCCCACACAAACAATATCAAGCTTCCAAGGCACATGTCAATGGCGAAATATGGGCCCATATAGAATGGAATTGCCATTGCTGTAGGTATTGGAATATACTGACTTACCTTCTTCCCTGATAAGTCTCTTATCAAATTTATCACAATGGCTGCTGCAAAGAACACATAGCATAGGGAGAGACAGTTCTTTGGGAGACTAGAGAAGCCCTCAACTGCGAGAAGAGCCATGTTACGGTAGACAGTTGCATAAGGTGCTGGATATGCACTTTCAGGCTGTCCAAGGTCATCAAATGCCTTGTAGAACAGCCAAAATACGCAGGGAGATATGATGCATCCCATCGCAGTGCCTACCACCTGGCTCACGAACATCGACCGCGGCGAAGATAGTGTCATGTATCCAGTCTTGAAATCCTGCATTAGATCAGATGCAGTTGAGACAATGTTCATCATTACTCCGCAAGCTGCTAAGCTTGCATTGACTCCACCATGCGTGGTAGTAGCACCGGCCCATGCCCCGATCGTGAAGATGACAAGCTTTCCATACGCAGACGCAAGGGACCAATCAGTCAACCCGGTACCATAAGAATTGCAGAAAGCTAGTACTGGTGCAATCACATAGAGGACAAGTATGTAATACCATTTCAACGACGAAAAAATGTGTGGCAAAGTATCTCCAAACAAGTAATACAACTTTAGCAACGGAAGGATGTGTGGCAAAGTGGCTATAGATACAACAGCAAGTATAACATAACCTCCAATGGCAAACCACGACGGAATCTGTTCTTTGAGGAAGAGTCGAGCCCTCCGGTTGTCATCGAAAGATACGCCAGAGGTCGAATGGAGGGAAGGATCCGAAACTACAATTACATCTTTCTTTTTCAGCTGAGACAAACGTATGAGAGTGGTTGCCAACACCTTTACAAAGTTATAAATCCCATCTCCCAGAGTCAAAGCAATGAGAAAAAGCACCTGTAGTATAGCCAGCCACAAACAGAAACAGAATTATAAAGCAACAAGTAAATATTGGAATTGTATGAACAATTTAAGGCTTTTTCTTTTTTTTTTTGGACCTTGTAGCCTTGAAGACCACGAAAGCTGGAGAGGGGAAGGTCAGCATTGAACCAATCTCCTTTTCTTTTCTCAATGAGAGGCCACATTAAACCCCATGAAAGGATTGCTCCAATCAACACAGAAATGTTAATGGTGTACGGACAAATCATTCCTACCCCAACATATGTTGCAGAAAAATCAAAATAAAATCTGCAGCAAGAAATGAGTGTTTTATTTATTTTATCATTATATATTATTAATTAAGTCTATCGAACTCGAACTCGAACTCGAACACCGTGTTAATTGATAGGAAGGAGGCATAAAAAAGTAGTACTCGTATTGATAAGCTTTGAGGCCAAATGTAGGGAAACTTTTAAATCCAC

Coding sequence (CDS)

ATGCCGAATTGGGAGCTTAGGAATTGCTGTCAGCATGATCAGGTTGTGTTCTTAGTTACGATTGGGGTGTTCACCGTTGTAATCCTCGCACTATGGAGGACATTTATAATCACTCCTTTTAAGCTCATTACTGTTTTCCTGCATGAAGCAAGTCATGCAATAGCTTGTAAGCTTACCTGTGGTGAGGTATATGCCTTTTCTTCATTTCTATTTGCTATGGTGGAAGGAATCCAGGTTCATGCAAACGAGGGAGGGGTAACTCAAACCCGTGGTGGTGCTTATTGGTTGATTTTGCCTGCAGGATATCTTGGATCATCGTTTTGGGGAATGGCTATGATTCTCGCATCAACCAATCTTCTCACTGCTAGGATTGCAGCGGGTTGTTTGGGTTTAGCTCTTCTTGTTGTACTCTTCATTGCAAAAAATTGGACGCTTAGAGGACTCTGTATTGGATTTATTATTTTCCTTGCGGTGGTTTGGGTTCTACAAGAAACGACTACAGTTCGCATACTTCGTTATGTCATTCTTTTCATTGGGGTCATGAACAGCTTGTTTTCGGTTTACGATATATATGATGATTTGATTTCACGAAGAGTCAACTCGAGCGATGCTGAGAAGTTTGCAGAACTGTGTCCATGCCCTTGTAATGGAATTGGATGGGGAGTCATATGGGGAATGATATCATTTATCTTCTTATGTGCATCTATCTATCTTGGTCTTGTCATCCTATCTTAA

Protein sequence

MPNWELRNCCQHDQVVFLVTIGVFTVVILALWRTFIITPFKLITVFLHEASHAIACKLTCGEVYAFSSFLFAMVEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLLTARIAAGCLGLALLVVLFIAKNWTLRGLCIGFIIFLAVVWVLQETTTVRILRYVILFIGVMNSLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGIGWGVIWGMISFIFLCASIYLGLVILS

Homology

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BLAST of Lsi03G004400 vs. TrEMBL
Match: A0A0A0LQR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404790 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 1.4e-121
Identity = 228/244 (93.44%), Postives = 231/244 (94.67%), Query Frame = 1


Query: 1   MPNWELRNCCQHDQVVFLVTIGVFTVVILALWRTFIITPFKLITVFLHEASHAIACKLTC 60
           MPNWELRNCC  DQV+FLVTIGVFT+VILALWRTFIITPFKLITVFLHEASHAIACKLTC
Sbjct: 1   MPNWELRNCCHRDQVLFLVTIGVFTLVILALWRTFIITPFKLITVFLHEASHAIACKLTC 60

Query: 61  GEVYAFSSFLFAMVEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLL 120
           GE           VEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLL
Sbjct: 61  GE-----------VEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLL 120

Query: 121 TARIAAGCLGLALLVVLFIAKNWTLRGLCIGFIIFLAVVWVLQETTTVRILRYVILFIGV 180
           TARIAAGCLGLALLVVLFIAKNWTLRGLC+GFIIFLAVVWVLQETTTVRILRYVILFIGV
Sbjct: 121 TARIAAGCLGLALLVVLFIAKNWTLRGLCVGFIIFLAVVWVLQETTTVRILRYVILFIGV 180

Query: 181 MNSLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGIGWGVIWGMISFIFLCASIYLGL 240
           MNSLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGIGWGVIWGMISFIFLCASIYLGL
Sbjct: 181 MNSLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGIGWGVIWGMISFIFLCASIYLGL 233

Query: 241 VILS 245
           VILS
Sbjct: 241 VILS 233

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BLAST of Lsi03G004400 vs. TrEMBL
Match: A0A067KA14_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12993 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 3.7e-114
Identity = 211/242 (87.19%), Postives = 224/242 (92.56%), Query Frame = 1


Query: 3   NWELRNCCQHDQVVFLVTIGVFTVVILALWRTFIITPFKLITVFLHEASHAIACKLTCGE 62
           NWEL+NCCQHDQVVFLVTIGVF+VVILALWRT ++TPFKLITVFLHEASHAIACKLTCG+
Sbjct: 4   NWELQNCCQHDQVVFLVTIGVFSVVILALWRTVLMTPFKLITVFLHEASHAIACKLTCGQ 63

Query: 63  VYAFSSFLFAMVEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLLTA 122
                      VEGI+VHANEGGVTQTRGG YWLILPAGYLGSSFWGM +ILASTNL TA
Sbjct: 64  -----------VEGIKVHANEGGVTQTRGGIYWLILPAGYLGSSFWGMLLILASTNLTTA 123

Query: 123 RIAAGCLGLALLVVLFIAKNWTLRGLCIGFIIFLAVVWVLQETTTVRILRYVILFIGVMN 182
           RIAAGC G+ALLVVLF+AKNWTLRGLCIGFIIFLAVVW+LQETT VRILRYVILFIGVMN
Sbjct: 124 RIAAGCFGVALLVVLFVAKNWTLRGLCIGFIIFLAVVWLLQETTKVRILRYVILFIGVMN 183

Query: 183 SLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGIGWGVIWGMISFIFLCASIYLGLVI 242
           SLFSVYDIYDDLISRRVNSSDAEKFAE+CPCPCNG+GWG+IWGMISFIFLC SIYLGLVI
Sbjct: 184 SLFSVYDIYDDLISRRVNSSDAEKFAEVCPCPCNGVGWGIIWGMISFIFLCGSIYLGLVI 234

Query: 243 LS 245
           LS
Sbjct: 244 LS 234

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BLAST of Lsi03G004400 vs. TrEMBL
Match: M5X6E3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010855mg PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 1.1e-113
Identity = 211/244 (86.48%), Postives = 226/244 (92.62%), Query Frame = 1


Query: 1   MPNWELRNCCQHDQVVFLVTIGVFTVVILALWRTFIITPFKLITVFLHEASHAIACKLTC 60
           MPNWEL++CC+HDQVVFL TIGVFTVVILALWRT I+TPFKLITVFLHEASHAIAC LTC
Sbjct: 1   MPNWELKSCCKHDQVVFLATIGVFTVVILALWRTIILTPFKLITVFLHEASHAIACILTC 60

Query: 61  GEVYAFSSFLFAMVEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLL 120
           G+           VEGIQVHANEGGVTQTRGG Y LILPAGYLGSSFWGMA+ILASTNLL
Sbjct: 61  GK-----------VEGIQVHANEGGVTQTRGGIYCLILPAGYLGSSFWGMALILASTNLL 120

Query: 121 TARIAAGCLGLALLVVLFIAKNWTLRGLCIGFIIFLAVVWVLQETTTVRILRYVILFIGV 180
           TARIAAGCLG+ALLVVLF+AKNWTLRGLCIGFI+FLA++WVLQETT VRILRYVILFIGV
Sbjct: 121 TARIAAGCLGVALLVVLFVAKNWTLRGLCIGFIVFLAIIWVLQETTKVRILRYVILFIGV 180

Query: 181 MNSLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGIGWGVIWGMISFIFLCASIYLGL 240
           MNSLFSVYDIYDDLISRRVNSSDAEKFAE+CPCPCNG+GWGVIWG+ISFIFL AS+YLGL
Sbjct: 181 MNSLFSVYDIYDDLISRRVNSSDAEKFAEVCPCPCNGVGWGVIWGLISFIFLSASVYLGL 233

Query: 241 VILS 245
           VILS
Sbjct: 241 VILS 233

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BLAST of Lsi03G004400 vs. TrEMBL
Match: A0A022R129_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a012988mg PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 4.6e-112
Identity = 204/243 (83.95%), Postives = 223/243 (91.77%), Query Frame = 1


Query: 2   PNWELRNCCQHDQVVFLVTIGVFTVVILALWRTFIITPFKLITVFLHEASHAIACKLTCG 61
           PNWEL+NCCQH+QV+FL TIGVFT+VILALWRTF++TPFKLITVFLHEASHAIACKLTCG
Sbjct: 3   PNWELKNCCQHEQVMFLATIGVFTLVILALWRTFLLTPFKLITVFLHEASHAIACKLTCG 62

Query: 62  EVYAFSSFLFAMVEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLLT 121
           E           VEGI+VHANEGGVT+TRGG YWLILPAGYLGSSFWGM +ILASTNLL 
Sbjct: 63  E-----------VEGIEVHANEGGVTRTRGGIYWLILPAGYLGSSFWGMVLILASTNLLA 122

Query: 122 ARIAAGCLGLALLVVLFIAKNWTLRGLCIGFIIFLAVVWVLQETTTVRILRYVILFIGVM 181
           A+IA+GCL L+LL+VLFIAKNWTLRGLCIGFI+F+A+VWVLQE T VRILRY+ILFIGVM
Sbjct: 123 AKIASGCLILSLLIVLFIAKNWTLRGLCIGFIVFIALVWVLQEMTKVRILRYIILFIGVM 182

Query: 182 NSLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGIGWGVIWGMISFIFLCASIYLGLV 241
           NSLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNG+ WGVIWGMISF+FLC SIYLGLV
Sbjct: 183 NSLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGLAWGVIWGMISFVFLCGSIYLGLV 234

Query: 242 ILS 245
           ILS
Sbjct: 243 ILS 234

[Close]

BLAST of Lsi03G004400 vs. TrEMBL
Match: A0A068U2Q4_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00040265001 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 4.6e-112
Identity = 206/243 (84.77%), Postives = 222/243 (91.36%), Query Frame = 1


Query: 2   PNWELRNCCQHDQVVFLVTIGVFTVVILALWRTFIITPFKLITVFLHEASHAIACKLTCG 61
           PNWEL++CC HDQVVFLVTIGVFTVVILALWRT  +TPFKLITVFLHEASHAIACKLTCG
Sbjct: 3   PNWELKHCCNHDQVVFLVTIGVFTVVILALWRTIFLTPFKLITVFLHEASHAIACKLTCG 62

Query: 62  EVYAFSSFLFAMVEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLLT 121
           +V           EG+QVHANEGGVTQTRGG YWLILPAGYLGSSFWGMA+ILASTNL+T
Sbjct: 63  QV-----------EGMQVHANEGGVTQTRGGVYWLILPAGYLGSSFWGMALILASTNLVT 122

Query: 122 ARIAAGCLGLALLVVLFIAKNWTLRGLCIGFIIFLAVVWVLQETTTVRILRYVILFIGVM 181
           +RIAAGC  +ALLVVLFIAKNWTLRGLCIGFIIF+ +VWVLQE T VRILRYVILFIGVM
Sbjct: 123 SRIAAGCFIVALLVVLFIAKNWTLRGLCIGFIIFIGIVWVLQELTKVRILRYVILFIGVM 182

Query: 182 NSLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGIGWGVIWGMISFIFLCASIYLGLV 241
           NSLFSVYDIYDDLISRRV+SSDAEKFAELCPCPCNG+GWGVIWGMISF+FLC ++YLGLV
Sbjct: 183 NSLFSVYDIYDDLISRRVHSSDAEKFAELCPCPCNGVGWGVIWGMISFVFLCGAMYLGLV 234

Query: 242 ILS 245
           ILS
Sbjct: 243 ILS 234

[Close]

BLAST of Lsi03G004400 vs. TAIR10
Match: AT1G67060.1 (AT1G67060.1 unknown protein)

HSP 1 Score: 387.5 bits (994), Expect = 6.1e-108
Identity = 198/243 (81.48%), Postives = 215/243 (88.48%), Query Frame = 1


Query: 2   PNWELRNCCQHDQVVFLVTIGVFTVVILALWRTFIITPFKLITVFLHEASHAIACKLTCG 61
           PNWELR CC  +Q  FL+TIGVFTVVIL LWRTF++TPFKLITVFLHEASHA+ACKLTCG
Sbjct: 4   PNWELRGCCNRNQNTFLITIGVFTVVILLLWRTFLLTPFKLITVFLHEASHAVACKLTCG 63

Query: 62  EVYAFSSFLFAMVEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLLT 121
           +V           EG++V+ANEGG T TRGG YWLILPAGYLGSSFWGMA+ILASTNLLT
Sbjct: 64  DV-----------EGMEVNANEGGSTTTRGGIYWLILPAGYLGSSFWGMALILASTNLLT 123

Query: 122 ARIAAGCLGLALLVVLFIAKNWTLRGLCIGFIIFLAVVWVLQETTTVRILRYVILFIGVM 181
           ARIAA  LGLAL +VLFIAKNWTLRGLCIGFI+FLAV+WVLQE TTV+ILRYVILFIGVM
Sbjct: 124 ARIAAAGLGLALFIVLFIAKNWTLRGLCIGFIVFLAVIWVLQELTTVKILRYVILFIGVM 183

Query: 182 NSLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGIGWGVIWGMISFIFLCASIYLGLV 241
           NSLFSVYDIYDDLISRRV+SSDAEKFAE+CPC C G GWGVIWGMISF FLCAS+YLGLV
Sbjct: 184 NSLFSVYDIYDDLISRRVHSSDAEKFAEICPC-CTGCGWGVIWGMISFAFLCASLYLGLV 234

Query: 242 ILS 245
           ILS
Sbjct: 244 ILS 234

[Close]

BLAST of Lsi03G004400 vs. NCBI nr
Match: gi|659081289|ref|XP_008441253.1| (PREDICTED: uncharacterized protein LOC103485439 [Cucumis melo])

HSP 1 Score: 449.1 bits (1154), Expect = 4.8e-123
Identity = 231/244 (94.67%), Postives = 232/244 (95.08%), Query Frame = 1


Query: 1   MPNWELRNCCQHDQVVFLVTIGVFTVVILALWRTFIITPFKLITVFLHEASHAIACKLTC 60
           MPNWELRNCC HDQVVFLVTIGVFTVVILALWRTFIITPFKLITVFLHEASHAIACKLTC
Sbjct: 1   MPNWELRNCCHHDQVVFLVTIGVFTVVILALWRTFIITPFKLITVFLHEASHAIACKLTC 60

Query: 61  GEVYAFSSFLFAMVEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLL 120
           GE           VEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLL
Sbjct: 61  GE-----------VEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLL 120

Query: 121 TARIAAGCLGLALLVVLFIAKNWTLRGLCIGFIIFLAVVWVLQETTTVRILRYVILFIGV 180
           TARIAAGCLGLALLVVLFIAKNWTLRGLC+GFIIFLAVVWVLQETTTVRILRYVILFIGV
Sbjct: 121 TARIAAGCLGLALLVVLFIAKNWTLRGLCVGFIIFLAVVWVLQETTTVRILRYVILFIGV 180

Query: 181 MNSLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGIGWGVIWGMISFIFLCASIYLGL 240
           MNSLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGIGWGVIWGMISFIFLCASIYLGL
Sbjct: 181 MNSLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGIGWGVIWGMISFIFLCASIYLGL 233

Query: 241 VILS 245
           VILS
Sbjct: 241 VILS 233

[Close]

BLAST of Lsi03G004400 vs. NCBI nr
Match: gi|449441740|ref|XP_004138640.1| (PREDICTED: uncharacterized protein LOC101216469 [Cucumis sativus])

HSP 1 Score: 443.7 bits (1140), Expect = 2.0e-121
Identity = 228/244 (93.44%), Postives = 231/244 (94.67%), Query Frame = 1


Query: 1   MPNWELRNCCQHDQVVFLVTIGVFTVVILALWRTFIITPFKLITVFLHEASHAIACKLTC 60
           MPNWELRNCC  DQV+FLVTIGVFT+VILALWRTFIITPFKLITVFLHEASHAIACKLTC
Sbjct: 1   MPNWELRNCCHRDQVLFLVTIGVFTLVILALWRTFIITPFKLITVFLHEASHAIACKLTC 60

Query: 61  GEVYAFSSFLFAMVEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLL 120
           GE           VEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLL
Sbjct: 61  GE-----------VEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLL 120

Query: 121 TARIAAGCLGLALLVVLFIAKNWTLRGLCIGFIIFLAVVWVLQETTTVRILRYVILFIGV 180
           TARIAAGCLGLALLVVLFIAKNWTLRGLC+GFIIFLAVVWVLQETTTVRILRYVILFIGV
Sbjct: 121 TARIAAGCLGLALLVVLFIAKNWTLRGLCVGFIIFLAVVWVLQETTTVRILRYVILFIGV 180

Query: 181 MNSLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGIGWGVIWGMISFIFLCASIYLGL 240
           MNSLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGIGWGVIWGMISFIFLCASIYLGL
Sbjct: 181 MNSLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGIGWGVIWGMISFIFLCASIYLGL 233

Query: 241 VILS 245
           VILS
Sbjct: 241 VILS 233

[Close]

BLAST of Lsi03G004400 vs. NCBI nr
Match: gi|1000942753|ref|XP_015582169.1| (PREDICTED: uncharacterized protein LOC8269351 isoform X1 [Ricinus communis])

HSP 1 Score: 424.5 bits (1090), Expect = 1.3e-115
Identity = 213/244 (87.30%), Postives = 227/244 (93.03%), Query Frame = 1


Query: 1   MPNWELRNCCQHDQVVFLVTIGVFTVVILALWRTFIITPFKLITVFLHEASHAIACKLTC 60
           MPNWEL+NCCQHDQVVFLVTIGVF++VILALWRT ++TPFKLITVFLHEASHA+ACKLTC
Sbjct: 1   MPNWELKNCCQHDQVVFLVTIGVFSLVILALWRTILMTPFKLITVFLHEASHAVACKLTC 60

Query: 61  GEVYAFSSFLFAMVEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLL 120
           G+           VEGIQVHANEGGVTQTRGG YW+ILPAGYLGSSFWGMA+ILASTNL 
Sbjct: 61  GD-----------VEGIQVHANEGGVTQTRGGIYWVILPAGYLGSSFWGMALILASTNLT 120

Query: 121 TARIAAGCLGLALLVVLFIAKNWTLRGLCIGFIIFLAVVWVLQETTTVRILRYVILFIGV 180
           TARIAAGCLG+ALLVVLFIA+NWTLRGLCIGFIIFLAVVW+LQETTTVRILRYVILFIGV
Sbjct: 121 TARIAAGCLGVALLVVLFIAQNWTLRGLCIGFIIFLAVVWILQETTTVRILRYVILFIGV 180

Query: 181 MNSLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGIGWGVIWGMISFIFLCASIYLGL 240
           MNSLFSVYDIYDDLISRRV+SSDAEKFAELCPCPC G+GWGVIWGMISF FLC SIYLGL
Sbjct: 181 MNSLFSVYDIYDDLISRRVHSSDAEKFAELCPCPCTGVGWGVIWGMISFTFLCGSIYLGL 233

Query: 241 VILS 245
           VILS
Sbjct: 241 VILS 233

[Close]

BLAST of Lsi03G004400 vs. NCBI nr
Match: gi|747102751|ref|XP_011099548.1| (PREDICTED: uncharacterized protein LOC105177934 [Sesamum indicum])

HSP 1 Score: 419.9 bits (1078), Expect = 3.1e-114
Identity = 208/243 (85.60%), Postives = 227/243 (93.42%), Query Frame = 1


Query: 2   PNWELRNCCQHDQVVFLVTIGVFTVVILALWRTFIITPFKLITVFLHEASHAIACKLTCG 61
           PNWEL+NCCQH+QVVFL TIG+FTVVILALWRTF++TPFKLITVFLHEASHAIACKLTCG
Sbjct: 3   PNWELKNCCQHEQVVFLATIGIFTVVILALWRTFLLTPFKLITVFLHEASHAIACKLTCG 62

Query: 62  EVYAFSSFLFAMVEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLLT 121
           EV           EG+QVHA+EGG+TQTRGG YWLILPAGYLGSSFWGMA+ILASTNLLT
Sbjct: 63  EV-----------EGMQVHADEGGMTQTRGGVYWLILPAGYLGSSFWGMALILASTNLLT 122

Query: 122 ARIAAGCLGLALLVVLFIAKNWTLRGLCIGFIIFLAVVWVLQETTTVRILRYVILFIGVM 181
           +RIAAGCL L+LL+VLFIAKNWTLRGLCIGF+IF+AV+WVLQETT  RILRY+ILFIGVM
Sbjct: 123 SRIAAGCLILSLLIVLFIAKNWTLRGLCIGFVIFIAVIWVLQETTKARILRYLILFIGVM 182

Query: 182 NSLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGIGWGVIWGMISFIFLCASIYLGLV 241
           NSLFSVYDIYDDLISRRV+SSDAEKFAELCPCPCNG+GWGVIWGMISFIFLCA+IYLGLV
Sbjct: 183 NSLFSVYDIYDDLISRRVHSSDAEKFAELCPCPCNGVGWGVIWGMISFIFLCAAIYLGLV 234

Query: 242 ILS 245
           ILS
Sbjct: 243 ILS 234

[Close]

BLAST of Lsi03G004400 vs. NCBI nr
Match: gi|802634420|ref|XP_012077989.1| (PREDICTED: uncharacterized protein LOC105638740 [Jatropha curcas])

HSP 1 Score: 419.1 bits (1076), Expect = 5.4e-114
Identity = 211/242 (87.19%), Postives = 224/242 (92.56%), Query Frame = 1


Query: 3   NWELRNCCQHDQVVFLVTIGVFTVVILALWRTFIITPFKLITVFLHEASHAIACKLTCGE 62
           NWEL+NCCQHDQVVFLVTIGVF+VVILALWRT ++TPFKLITVFLHEASHAIACKLTCG+
Sbjct: 4   NWELQNCCQHDQVVFLVTIGVFSVVILALWRTVLMTPFKLITVFLHEASHAIACKLTCGQ 63

Query: 63  VYAFSSFLFAMVEGIQVHANEGGVTQTRGGAYWLILPAGYLGSSFWGMAMILASTNLLTA 122
                      VEGI+VHANEGGVTQTRGG YWLILPAGYLGSSFWGM +ILASTNL TA
Sbjct: 64  -----------VEGIKVHANEGGVTQTRGGIYWLILPAGYLGSSFWGMLLILASTNLTTA 123

Query: 123 RIAAGCLGLALLVVLFIAKNWTLRGLCIGFIIFLAVVWVLQETTTVRILRYVILFIGVMN 182
           RIAAGC G+ALLVVLF+AKNWTLRGLCIGFIIFLAVVW+LQETT VRILRYVILFIGVMN
Sbjct: 124 RIAAGCFGVALLVVLFVAKNWTLRGLCIGFIIFLAVVWLLQETTKVRILRYVILFIGVMN 183

Query: 183 SLFSVYDIYDDLISRRVNSSDAEKFAELCPCPCNGIGWGVIWGMISFIFLCASIYLGLVI 242
           SLFSVYDIYDDLISRRVNSSDAEKFAE+CPCPCNG+GWG+IWGMISFIFLC SIYLGLVI
Sbjct: 184 SLFSVYDIYDDLISRRVNSSDAEKFAEVCPCPCNGVGWGIIWGMISFIFLCGSIYLGLVI 234

Query: 243 LS 245
           LS
Sbjct: 244 LS 234

The following BLAST results are available for this feature:

BLAST of Lsi03G004400 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi03G004400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQR0_CUCSA	1.4e-121	93.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404790 PE=4 SV=1	[more]
A0A067KA14_JATCU	3.7e-114	87.19	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12993 PE=4 SV=1	[more]
M5X6E3_PRUPE	1.1e-113	86.48	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010855mg PE=4 SV=1	[more]
A0A022R129_ERYGU	4.6e-112	83.95	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a012988mg PE=4 SV=1	[more]
A0A068U2Q4_COFCA	4.6e-112	84.77	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00040265001 PE=4 SV=1	[more]

BLAST of Lsi03G004400 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G67060.1	6.1e-108	81.48	unknown protein	[more]

BLAST of Lsi03G004400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081289\|ref\|XP_008441253.1\|	4.8e-123	94.67	PREDICTED: uncharacterized protein LOC103485439 [Cucumis melo]	[more]
gi\|449441740\|ref\|XP_004138640.1\|	2.0e-121	93.44	PREDICTED: uncharacterized protein LOC101216469 [Cucumis sativus]	[more]
gi\|1000942753\|ref\|XP_015582169.1\|	1.3e-115	87.30	PREDICTED: uncharacterized protein LOC8269351 isoform X1 [Ricinus communis]	[more]
gi\|747102751\|ref\|XP_011099548.1\|	3.1e-114	85.60	PREDICTED: uncharacterized protein LOC105177934 [Sesamum indicum]	[more]
gi\|802634420\|ref\|XP_012077989.1\|	5.4e-114	87.19	PREDICTED: uncharacterized protein LOC105638740 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G004400.1	Lsi03G004400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33979	FAMILY NOT NAMED	coord: 1..243 score: 3.0E
None	No IPR available	PANTHER	PTHR33979:SF3	SUBFAMILY NOT NAMED	coord: 1..243 score: 3.0E
None	No IPR available	PFAM	PF13398	Peptidase_M50B	coord: 24..234 score: 6.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi03G004400	Csa2G404790	Cucumber (Chinese Long) v2	culsiB115
Lsi03G004400	CSPI02G25220	Wild cucumber (PI 183967)	cpilsiB113
Lsi03G004400	Cucsa.088110	Cucumber (Gy14) v1	cgylsiB098
Lsi03G004400	CmaCh04G029960	Cucurbita maxima (Rimu)	cmalsiB656
Lsi03G004400	CmoCh04G031170	Cucurbita moschata (Rifu)	cmolsiB645
Lsi03G004400	Cla011879	Watermelon (97103) v1	lsiwmB275
Lsi03G004400	MELO3C008142	Melon (DHL92) v3.5.1	lsimeB259
Lsi03G004400	ClCG11G007870	Watermelon (Charleston Gray)	lsiwcgB227
Lsi03G004400	MELO3C008142.2	Melon (DHL92) v3.6.1	lsimedB272
Lsi03G004400	Cla97C11G215600	Watermelon (97103) v2	lsiwmbB224
Lsi03G004400	Bhi04G002037	Wax gourd	lsiwgoB322
Lsi03G004400	Cp4.1LG01g25850	Cucurbita pepo (Zucchini)	cpelsiB339
Lsi03G004400	CsGy2G024880	Cucumber (Gy14) v2	cgyblsiB102
Lsi03G004400	Carg06068	Silver-seed gourd	carlsiB017
Lsi03G004400	CsaV3_2G033720	Cucumber (Chinese Long) v3	cuclsiB127

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G004400	Silver-seed gourd	carlsiB986
Lsi03G004400	Cucurbita maxima (Rimu)	cmalsiB276
Lsi03G004400	Cucurbita moschata (Rifu)	cmolsiB265
Lsi03G004400	Cucurbita pepo (Zucchini)	cpelsiB143