Lsi03G004390 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi03G004390
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCopper-binding periplasmic protein
Locationchr03 : 4930548 .. 4931597 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTATTGCCCTTTAATTTTGCCATGAAAACAAATAATTGGTTTAAAAAATTCCACCACGACCGGTTCTTATTAAACTCTCTGTGTTTCTCACAGTTGCTCTTCACCCAACAAAGTTTGATTACGAAAATTTGGTCTCTGAATAAGCCTTCAAAATCTGTTAATTTGGTCGCTTCTCAATTTTCTCCATCTTCATCTTCATCTTCATCTTCATCTTCTTCCTTCCTTCTTCATACATTCTTCTTCATTTTTATGCTCATCATCATTCCCCATTCCAATTCCATGGCGATCGACGCCGTTTCTCCTGATATTCCCGTTGCCGCAATGAGCCCTAGAATTTCATTCTCTCACGATTTCTGCCACAACGAAGCTATTCCCGTCGAACAACGCCCTAATTCCCGATCCAAGTCCTCCGGTTTCAATTCCAGCTTCGATTTCGATTTCTGCATTCCTGAGTGTTCTGATCAGGAATCCTCCTCCGCCGATGAATTTTTCTCCCACGGCAAAATTCTTCCTCTCGAAATCAAGAAGAAACCGGAAGAGAGACTCGATCACTTTTCTTCTCCTTCATTGACGCGTACGAAATCGCTCGATCTCAATGCGGAGAAATGTTTGAAGAAAGATCGATCGTTGAAGGAAATCAAGGCTACGAGTAGTGATTCTGAAGAGAAACAAAGTTCTAATTCCAATTCTAAATCCTTTTGGCGTTTCAAAAGAAGCAGTAGTTGTGGCTCTGGTTATACTCGTAGCTTATGTCCTTTGCCGCTTCTCTCACGAAGCAATTCGACTGGCTCTGCGTCGAATATTAAGCGAACGCCATTATCCAAGGACGGTGTAAATCAAAAACAAAGCTCTCATAGAAATGCATCAAAAAATTCGTTGCAGTGTTCGTCTTCATTCGGATATCAGAAACCTCCATTGAAGAAGGTACATGGTTCGTACGGTAATGGAGTTCAAGTAAACCCTATTCTAAATGTTCATTCCGGGAATCTTTTCGGTTTAGGCTCAATATTCTCCTCTGCCAAGGATAGAAGCAAGAAAAAGTGA

mRNA sequence

ATGGATTTATTGCCCTTTAATTTTGCCATGAAAACAAATAATTGGTTTAAAAAATTCCACCACGACCGGTTCTTATTAAACTCTCTGTGTTTCTCACAGTTGCTCTTCACCCAACAAAGTTTGATTACGAAAATTTGGTCTCTGAATAAGCCTTCAAAATCTGTTAATTTGGTCGCTTCTCAATTTTCTCCATCTTCATCTTCATCTTCATCTTCATCTTCTTCCTTCCTTCTTCATACATTCTTCTTCATTTTTATGCTCATCATCATTCCCCATTCCAATTCCATGGCGATCGACGCCGTTTCTCCTGATATTCCCGTTGCCGCAATGAGCCCTAGAATTTCATTCTCTCACGATTTCTGCCACAACGAAGCTATTCCCGTCGAACAACGCCCTAATTCCCGATCCAAGTCCTCCGGTTTCAATTCCAGCTTCGATTTCGATTTCTGCATTCCTGAGTGTTCTGATCAGGAATCCTCCTCCGCCGATGAATTTTTCTCCCACGGCAAAATTCTTCCTCTCGAAATCAAGAAGAAACCGGAAGAGAGACTCGATCACTTTTCTTCTCCTTCATTGACGCGTACGAAATCGCTCGATCTCAATGCGGAGAAATGTTTGAAGAAAGATCGATCGTTGAAGGAAATCAAGGCTACGAGTAGTGATTCTGAAGAGAAACAAAGTTCTAATTCCAATTCTAAATCCTTTTGGCGTTTCAAAAGAAGCAGTAGTTGTGGCTCTGGTTATACTCGTAGCTTATGTCCTTTGCCGCTTCTCTCACGAAGCAATTCGACTGGCTCTGCGTCGAATATTAAGCGAACGCCATTATCCAAGGACGGTGTAAATCAAAAACAAAGCTCTCATAGAAATGCATCAAAAAATTCGTTGCAGTGTTCGTCTTCATTCGGATATCAGAAACCTCCATTGAAGAAGGTACATGGTTCGTACGGTAATGGAGTTCAAGTAAACCCTATTCTAAATGTTCATTCCGGGAATCTTTTCGGTTTAGGCTCAATATTCTCCTCTGCCAAGGATAGAAGCAAGAAAAAGTGA

Coding sequence (CDS)

ATGGATTTATTGCCCTTTAATTTTGCCATGAAAACAAATAATTGGTTTAAAAAATTCCACCACGACCGGTTCTTATTAAACTCTCTGTGTTTCTCACAGTTGCTCTTCACCCAACAAAGTTTGATTACGAAAATTTGGTCTCTGAATAAGCCTTCAAAATCTGTTAATTTGGTCGCTTCTCAATTTTCTCCATCTTCATCTTCATCTTCATCTTCATCTTCTTCCTTCCTTCTTCATACATTCTTCTTCATTTTTATGCTCATCATCATTCCCCATTCCAATTCCATGGCGATCGACGCCGTTTCTCCTGATATTCCCGTTGCCGCAATGAGCCCTAGAATTTCATTCTCTCACGATTTCTGCCACAACGAAGCTATTCCCGTCGAACAACGCCCTAATTCCCGATCCAAGTCCTCCGGTTTCAATTCCAGCTTCGATTTCGATTTCTGCATTCCTGAGTGTTCTGATCAGGAATCCTCCTCCGCCGATGAATTTTTCTCCCACGGCAAAATTCTTCCTCTCGAAATCAAGAAGAAACCGGAAGAGAGACTCGATCACTTTTCTTCTCCTTCATTGACGCGTACGAAATCGCTCGATCTCAATGCGGAGAAATGTTTGAAGAAAGATCGATCGTTGAAGGAAATCAAGGCTACGAGTAGTGATTCTGAAGAGAAACAAAGTTCTAATTCCAATTCTAAATCCTTTTGGCGTTTCAAAAGAAGCAGTAGTTGTGGCTCTGGTTATACTCGTAGCTTATGTCCTTTGCCGCTTCTCTCACGAAGCAATTCGACTGGCTCTGCGTCGAATATTAAGCGAACGCCATTATCCAAGGACGGTGTAAATCAAAAACAAAGCTCTCATAGAAATGCATCAAAAAATTCGTTGCAGTGTTCGTCTTCATTCGGATATCAGAAACCTCCATTGAAGAAGGTACATGGTTCGTACGGTAATGGAGTTCAAGTAAACCCTATTCTAAATGTTCATTCCGGGAATCTTTTCGGTTTAGGCTCAATATTCTCCTCTGCCAAGGATAGAAGCAAGAAAAAGTGA

Protein sequence

MDLLPFNFAMKTNNWFKKFHHDRFLLNSLCFSQLLFTQQSLITKIWSLNKPSKSVNLVASQFSPSSSSSSSSSSSFLLHTFFFIFMLIIIPHSNSMAIDAVSPDIPVAAMSPRISFSHDFCHNEAIPVEQRPNSRSKSSGFNSSFDFDFCIPECSDQESSSADEFFSHGKILPLEIKKKPEERLDHFSSPSLTRTKSLDLNAEKCLKKDRSLKEIKATSSDSEEKQSSNSNSKSFWRFKRSSSCGSGYTRSLCPLPLLSRSNSTGSASNIKRTPLSKDGVNQKQSSHRNASKNSLQCSSSFGYQKPPLKKVHGSYGNGVQVNPILNVHSGNLFGLGSIFSSAKDRSKKK
Homology
[Close]
BLAST of Lsi03G004390 vs. TrEMBL
Match: A0A0A0LMU8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404800 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 2.6e-108
Identity = 221/263 (84.03%), Postives = 232/263 (88.21%), Query Frame = 1 

Query: 96  MAID-AVSPDIPVAAMSPRISFSHDFCHNEAIPVEQRPNSRSKSSGFNSSFDFDFCIPEC 155
           MAI+ AVS DIPV AMSPRISFSHDF H E IPVEQRPNSRSKSSGF SSFDFDFCIPEC
Sbjct: 1   MAIETAVSSDIPVPAMSPRISFSHDFSHTEPIPVEQRPNSRSKSSGFGSSFDFDFCIPEC 60

Query: 156 SDQESSSADEFFSHGKILPLEIKKKPE-ERLDHFS----SPSLTRTKSLDLNAEKCLKKD 215
           SD ESSSADE FS GKILPLEIKKKPE +RL+H S    SP LTRTKSLDLN EKCLKK+
Sbjct: 61  SDHESSSADEIFSQGKILPLEIKKKPEDQRLEHSSLNHHSPPLTRTKSLDLNPEKCLKKN 120

Query: 216 RSLKEIKATSSDSEEKQSSNSNSKSFWRFKRSSSCGSGYTRSLCPLPLLSRSNSTGSAS- 275
            SLKEIK T SDSEEKQ++NSNSKSFWRFKRSSSCGSGYTRSLCPLPLLSRSNSTGSAS 
Sbjct: 121 PSLKEIKGTGSDSEEKQNTNSNSKSFWRFKRSSSCGSGYTRSLCPLPLLSRSNSTGSASN 180

Query: 276 NIKRTPLSKDGVNQKQSSHRNASKNSLQC--SSSFGYQKPPLKKVHGSYGNGVQVNPILN 335
           N+KR+PLSKDGVNQKQSSHRN  KNS QC  SSS G+QKPPL KVHGSYGNG++VNPILN
Sbjct: 181 NMKRSPLSKDGVNQKQSSHRNGLKNSQQCSSSSSTGFQKPPLNKVHGSYGNGIKVNPILN 240

Query: 336 VHSGNLFGLGSIFSSAKDRSKKK 350
           VHS NLFGLGSIFSSA DRSKKK
Sbjct: 241 VHSANLFGLGSIFSSAIDRSKKK 263

[Close]
BLAST of Lsi03G004390 vs. TrEMBL
Match: E5GB42_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 5.7e-108
Identity = 222/263 (84.41%), Postives = 232/263 (88.21%), Query Frame = 1 

Query: 96  MAIDA-VSPDIPVAAMSPRISFSHDFCHNEAIPVEQRPNSRSKSSGFNSSFDFDFCIPEC 155
           MAI+A VSPDIPV AMSPRISFSHDF   E IPVEQRPNSRSKSSGF+SSFDFDFCIPEC
Sbjct: 1   MAIEAAVSPDIPVPAMSPRISFSHDFSLTEPIPVEQRPNSRSKSSGFSSSFDFDFCIPEC 60

Query: 156 SDQESSSADEFFSHGKILPLEIKKKPEER------LDHFSSPSLTRTKSLDLNAEKCLKK 215
           SD ESSSADE FSHGKILPLEIKKKPE++      L+H S P LTRTKSLDLN EKCLKK
Sbjct: 61  SDHESSSADEIFSHGKILPLEIKKKPEDQRLEHSSLNHHSPPPLTRTKSLDLNPEKCLKK 120

Query: 216 DRSLKEIKATSSDSEEKQSSNSNSKSFWRFKRSSSCGSGYTRSLCPLPLLSRSNSTGSAS 275
           D S KEIKAT SDSEEKQ++NSNSKSFWRFKRSSSCGSGYTRSLCPLPLLSRSNSTGS+S
Sbjct: 121 DPSFKEIKATGSDSEEKQNTNSNSKSFWRFKRSSSCGSGYTRSLCPLPLLSRSNSTGSSS 180

Query: 276 -NIKRTPLSKDGVNQKQSSHRNASKNSLQC-SSSFGYQKPPLKKVHGSYGNGVQVNPILN 335
            NIKRTPLSKDGVNQKQSS RN  KN  QC SSS G+QKPPLKKVHGSYGNGV+VNPILN
Sbjct: 181 NNIKRTPLSKDGVNQKQSS-RNGLKNLQQCSSSSTGFQKPPLKKVHGSYGNGVKVNPILN 240

Query: 336 VHSGNLFGLGSIFSSAKDRSKKK 350
           VHS NLFGLGSIFSSA DRSKKK
Sbjct: 241 VHSANLFGLGSIFSSAIDRSKKK 262

[Close]
BLAST of Lsi03G004390 vs. TrEMBL
Match: A0A061EHT9_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_019429 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.4e-61
Identity = 146/261 (55.94%), Postives = 188/261 (72.03%), Query Frame = 1 

Query: 96  MAIDAVSPDIPVAAMSPRISFSHDFCHNEAIPVEQRPNSRSKSSGFNSSFDFDFCIPECS 155
           MA++  S +   + MSPRISFSHD CH + +PVEQRP  RSKSSG NSS DFDFC+ E  
Sbjct: 1   MAVELCSEN---SGMSPRISFSHDLCHFDVVPVEQRP-LRSKSSGLNSSIDFDFCVRESL 60

Query: 156 DQESSSADEFFSHGKILPLEIKKK--PEERLDHFSSP-SLTRTKSL--DLNAEKCLKKDR 215
           D +SSSADE FS GKILP EIKKK  P +++D  ++P  L R+ S+  D N  +  KK+ 
Sbjct: 61  DLQSSSADELFSDGKILPTEIKKKNVPSKQIDQSTAPLPLPRSNSVHDDANINETSKKES 120

Query: 216 SLKEIKATSSDSEEKQSSNSNSKSFWRFKRSSS--CGSGYTRSLCPLPLLSRSNSTGSAS 275
           S KE K T  ++ ++     +SKSFWRFKRSSS  CGSGY RSLCPLPLLSRSNSTGS  
Sbjct: 121 S-KENKITRDETGDEVDEKQSSKSFWRFKRSSSLNCGSGYGRSLCPLPLLSRSNSTGSTP 180

Query: 276 NIKRTPLSKDGVNQKQSSHRNASKNSLQCSSSFGYQKPPLKKVHGSYGNGVQVNPILNVH 335
           N+K+  +SKD  + KQ++ ++A+ +S + S+S  YQKPPL+K +  YGN VQVNP+LNV 
Sbjct: 181 NVKQASISKDSHHHKQNAQKHATNSSYKPSTS--YQKPPLRKSYKPYGNAVQVNPVLNVP 240

Query: 336 SGNLFGLGSIFSSAKDRSKKK 350
           SGN+FGLGSIF + KD++ +K
Sbjct: 241 SGNMFGLGSIFFTGKDKNHRK 254

[Close]
BLAST of Lsi03G004390 vs. TrEMBL
Match: A0A0L9VMK0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g201400 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 3.8e-59
Identity = 141/266 (53.01%), Postives = 181/266 (68.05%), Query Frame = 1 

Query: 96  MAIDAVSPDIPVAAMSPRISFSHDFCHNEAIPVEQRPNSRSKSSGFNSSFDFDFCIPECS 155
           M ++  S +  V++MSPRISFSHDF  ++ IPVE+ P  RS SSG +SS DF+FC+ E  
Sbjct: 1   MVVELCSENCGVSSMSPRISFSHDFSQSDVIPVEKHP-LRSNSSGLSSSIDFNFCVQESL 60

Query: 156 DQESSSADEFFSHGKILPLEIKK--------KPEERLDHFSSPSLTRTKSLDLNAEKCLK 215
           + ESSSADE FSHG ILP +IKK        +  ++L   S P L  +K++  NA    +
Sbjct: 61  ELESSSADELFSHGVILPTQIKKGLNNVVLKQKSQQLAPPSQPPLPPSKAVCDNAPATTR 120

Query: 216 KDRSLKEIKATSSDSEEKQSSNSNSKSFWRFKRSSSCGSGYTRSLCPLPLLSRSNSTGSA 275
           K  S KE    S D  E+     +SKSFWRFKRSSSCGSGY RSLCPLPLLSRSNSTGS+
Sbjct: 121 KS-SKKESHKDSKDLNEEADEKHSSKSFWRFKRSSSCGSGYGRSLCPLPLLSRSNSTGSS 180

Query: 276 SNIKRTPLSKDGVNQKQSSHRNASKNS----LQCSSSFGYQKPPLKKVHGSYGNGVQVNP 335
            ++KR PLSK+G + KQ+S + +S  S       +S   +QKPPLK+ HGSY NG++V+P
Sbjct: 181 PSVKRIPLSKEGHHVKQNSQKRSSSISRSHPQSLASHNNHQKPPLKRSHGSYANGIRVSP 240

Query: 336 ILNVHSGNLFGLGSIFSSAKDRSKKK 350
           +LNV S NLFG GSIFS+ +D+SKKK
Sbjct: 241 VLNVPSANLFGFGSIFSNNRDKSKKK 264

[Close]
BLAST of Lsi03G004390 vs. TrEMBL
Match: A0A0S3T9Q9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G092200 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 3.8e-59
Identity = 141/266 (53.01%), Postives = 181/266 (68.05%), Query Frame = 1 

Query: 96  MAIDAVSPDIPVAAMSPRISFSHDFCHNEAIPVEQRPNSRSKSSGFNSSFDFDFCIPECS 155
           M ++  S +  V++MSPRISFSHDF  ++ IPVE+ P  RS SSG +SS DF+FC+ E  
Sbjct: 1   MVVELCSENCGVSSMSPRISFSHDFSQSDVIPVEKHP-LRSNSSGLSSSIDFNFCVQESL 60

Query: 156 DQESSSADEFFSHGKILPLEIKK--------KPEERLDHFSSPSLTRTKSLDLNAEKCLK 215
           + ESSSADE FSHG ILP +IKK        +  ++L   S P L  +K++  NA    +
Sbjct: 61  ELESSSADELFSHGVILPTQIKKGLNNVVLKQKSQQLAPPSQPPLPPSKAVCDNAPATTR 120

Query: 216 KDRSLKEIKATSSDSEEKQSSNSNSKSFWRFKRSSSCGSGYTRSLCPLPLLSRSNSTGSA 275
           K  S KE    S D  E+     +SKSFWRFKRSSSCGSGY RSLCPLPLLSRSNSTGS+
Sbjct: 121 KS-SKKESHKDSKDLNEEADEKHSSKSFWRFKRSSSCGSGYGRSLCPLPLLSRSNSTGSS 180

Query: 276 SNIKRTPLSKDGVNQKQSSHRNASKNS----LQCSSSFGYQKPPLKKVHGSYGNGVQVNP 335
            ++KR PLSK+G + KQ+S + +S  S       +S   +QKPPLK+ HGSY NG++V+P
Sbjct: 181 PSVKRIPLSKEGHHVKQNSQKRSSSISRSHPQSLASHNNHQKPPLKRSHGSYANGIRVSP 240

Query: 336 ILNVHSGNLFGLGSIFSSAKDRSKKK 350
           +LNV S NLFG GSIFS+ +D+SKKK
Sbjct: 241 VLNVPSANLFGFGSIFSNNRDKSKKK 264

[Close]
BLAST of Lsi03G004390 vs. TAIR10
Match: AT1G67050.1 (AT1G67050.1 unknown protein)

HSP 1 Score: 188.0 bits (476), Expect = 1.0e-47
Identity = 128/275 (46.55%), Postives = 171/275 (62.18%), Query Frame = 1 

Query: 96  MAIDAVSPDIPVAAMSPRISFSHDFCHNEAIPVEQRP--NSRSKSSGFNSSFDFDFCIP- 155
           MA+D +S +   + MSPRISFS DFC ++AIP+E+RP  +S SK S  NSS DFDFCIP 
Sbjct: 1   MAVDLLSEN---SNMSPRISFSRDFCQSDAIPIEKRPLRSSNSKPSSLNSSIDFDFCIPG 60

Query: 156 -----ECSDQESSSADEFFSHGKILPLEIKKKPEERLDHFSSPSLTRTKSLDLNAEKCLK 215
                E  DQ S SADE FS+GKILP EIKKKPE        P     +   + ++   +
Sbjct: 61  GVNSGESFDQGSWSADELFSNGKILPTEIKKKPE--------PGKKEPEPKPVKSKPDSR 120

Query: 216 KDRSLKEIKATSSDSEEKQSSNSNSKSFWRFKRSSS--CGSGYTRSLCPLPLLSRSNSTG 275
           K R     +    D        +N+KSFW FKRSSS  CGS Y RSLCPLPLL+RSNSTG
Sbjct: 121 KQRKQPNEEQQEDDVIITTEEKTNTKSFWGFKRSSSLNCGSTYGRSLCPLPLLNRSNSTG 180

Query: 276 SASNIKRTPLSK---DGVNQKQSSHRNASKNSLQCSSSFGYQKPPLKKVHGSY------G 335
           S S+ ++   S+   + V  +QSS  ++S ++    S+ G+ KPPLKK +G Y      G
Sbjct: 181 STSSKQKQSSSRKHNEHVKLQQSSSLSSSSSASSSLSNNGFSKPPLKKSYGGYSYGSHGG 240

Query: 336 NGVQVNPILN-VHSGNLFGLGSIFS-SAKDRSKKK 350
            G++V+P++N V SGNLFG GS+FS + +D++KK+
Sbjct: 241 GGIRVSPVINVVPSGNLFGFGSMFSGNGRDKNKKR 264

[Close]
BLAST of Lsi03G004390 vs. TAIR10
Match: AT1G48780.1 (AT1G48780.1 unknown protein)

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-17
Identity = 88/247 (35.63%), Postives = 124/247 (50.20%), Query Frame = 1 

Query: 113 RISFSHDFCHNEAIPVEQRPNS----RSKSSGFNSSFDFDFCIPECSDQ-ESSSADEFFS 172
           RISFS D   ++  P      S    R ++   +S+ DF+F I    D  +SS ADE F+
Sbjct: 9   RISFSSDLGQSDKAPPPVIEPSGLIRRDETLLDSSNSDFEFHISNSFDPGDSSPADEIFA 68

Query: 173 HGKILPLEIKKKPE--ERLDHFSSPSLTRTKSLDLNAEKCLKKDRSLKEIKATSSDSEEK 232
            G ILP  +       +RL  +  P +T + S    + + L    S KE    +S +   
Sbjct: 69  DGMILPFHVTAASTVPKRLYKYELPPITSSLSPSPLSPQPLPTKHSEKETNGRASGANSD 128

Query: 233 QSSNSNSKSFWRFKRSSSCGSGYTRSL-CPLPLLSRSNSTGSASNIKRTPLSKDGVNQKQ 292
             +  +SKSFW FKRSSS      +SL C  P L+RSNSTGS +N KR  L      +  
Sbjct: 129 SEAEKSSKSFWSFKRSSSLNCDIKKSLICSFPRLTRSNSTGSVTNSKRAML------RDV 188

Query: 293 SSHRNASKNSLQCSSSFGYQKPPLKKVHGSYGNGVQVNPILNVHSGNLFGLGSIF--SSA 350
           ++HR +S++S   +  F  QK   KK  G  G    V P+LN    + FGLGSI   S++
Sbjct: 189 NNHRPSSRSSCCNAYQFRPQKHTGKK--GEGGGSFSVIPVLN--GPSTFGLGSILRHSNS 245

[Close]
BLAST of Lsi03G004390 vs. TAIR10
Match: AT5G38320.1 (AT5G38320.1 unknown protein)

HSP 1 Score: 68.9 bits (167), Expect = 6.9e-12
Identity = 55/142 (38.73%), Postives = 81/142 (57.04%), Query Frame = 1 

Query: 111 SPRISFSHDFCHNEAIPVEQRPN-SRSKSSGFNSSFDFDFCIPE--CSDQESSSADEFFS 170
           SPRISFS+DFCH+E+IP+EQR + S    S F   F  +F IP    S + S SA+EFF+
Sbjct: 8   SPRISFSNDFCHHESIPIEQRTSQSPYDISNFYWGFPLEFSIPRGAISGESSWSAEEFFN 67

Query: 171 HGKILPLEIKKKPE----ERLDHFSS----PSLTRTKSLD--LNAEKCLKKDRSLK---- 230
            GKILP+E+KK PE     + D + +    P +   +  +  L  E+   ++  +K    
Sbjct: 68  DGKILPIEMKKIPEPIYRSKTDKYKTGLPRPEIIPIEDFEPVLEIEEIGDQEYEVKLPLL 127

Query: 231 EIKATSSDSEEKQSSNSNSKSF 236
              +T S+S + Q S+S+S SF
Sbjct: 128 PYNSTGSNSIKSQVSSSSSSSF 149

[Close]
BLAST of Lsi03G004390 vs. TAIR10
Match: AT1G68330.1 (AT1G68330.1 unknown protein)

HSP 1 Score: 67.0 bits (162), Expect = 2.6e-11
Identity = 87/255 (34.12%), Postives = 121/255 (47.45%), Query Frame = 1 

Query: 96  MAIDAVSPDIPVAAMSPRISFSHDFCHNEAIPVEQRPNSRSKSSGFNSSFDFDFCI-PEC 155
           MAID    +   + +SPRISFS+D    +   V      R  S+  +S  +FDFC    C
Sbjct: 1   MAIDVCCSEASGSGISPRISFSYDLDSTDDGEV------RLDSTLLDSGSEFDFCFGSSC 60

Query: 156 SDQESSSADEFFSHGKILPLEIKKKPEERLDHFSSPSLTRTKSL---------DLNAEKC 215
           S QE S ADE FS GKILP++IKK  EE L    +  + R+ SL           ++ + 
Sbjct: 61  SVQEVSPADELFSEGKILPVQIKK--EESLPQTVTFRVPRSASLSSSSSSSSSSSSSSRA 120

Query: 216 LKKDRSLKEIKAT-SSDSEEKQSSNSNSKSFWRFKRSSSCGSGYTRS----LCPLPLLSR 275
            +K   LKE+     SD E+K         F +FKRS S     +R+    +     LSR
Sbjct: 121 PEKKMRLKELLLNPESDFEDKPRG-----LFLQFKRSISLNYDKSRNSKGLIRSFHFLSR 180

Query: 276 SNSTGSASNIKRTPLSKDGVNQKQSSHRNASKNSLQCSSSFG------YQKPPLKKVHGS 327
           SNST    N     L K+  +  ++ +    K  L+ SSS        Y K PL +   S
Sbjct: 181 SNST---PNPNLDLLPKETHHPHKTHNLPKHKPPLRRSSSLSSSSVPFYSKKPLGR--NS 237

[Close]
BLAST of Lsi03G004390 vs. TAIR10
Match: AT3G18300.1 (AT3G18300.1 unknown protein)

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-10
Identity = 91/277 (32.85%), Postives = 125/277 (45.13%), Query Frame = 1 

Query: 113 RISFSHDFCHNE-AIPVEQRPNS---RSKSSGFNSSFDFDFCIPECSDQ-ESSSADEFFS 172
           R SF+ D   ++   P+EQ+P+    R  +   +S+ DF+F I    D  +SS ADE F+
Sbjct: 10  RFSFAGDLGQSDKGTPMEQQPSGPVRRDTTLLDSSNSDFEFHISSNFDPGDSSPADEIFA 69

Query: 173 HGKILPL-----EIKKKPEERLDHFSSPSLTRTKSLDLNAEKCL------KKDRSLKEIK 232
            G ILP+            +RL  +  P +    +L               +  S+KE +
Sbjct: 70  DGMILPVLPFQVTATSTMPKRLYKYELPPIVSAPTLSSYLPPLPLPLPEHSRKYSVKETR 129

Query: 233 AT--------SSDSEEKQSSNSNSKSFWRFKRSSSCGSGYTRSL-CPLPLLSRSNSTGSA 292
            +        +SDSE ++SS    KSFW FKRSSS      +SL C  P L+RSNSTGS 
Sbjct: 130 GSLNGRGSGANSDSEAEKSS----KSFWSFKRSSSLNCDIKKSLICSFPRLTRSNSTGSV 189

Query: 293 SNIKRTPL-------------SKDGVNQKQSSHRNASKNSLQCSSSFGYQKPPLK---KV 349
           +  KR  L              + GVN   SSH     +S  CSS   YQ  P K   K 
Sbjct: 190 AISKREMLRDINKHSSQRHGVPRPGVN--PSSHMR-PPSSFCCSS---YQFRPQKHAGKN 249

[Close]
BLAST of Lsi03G004390 vs. NCBI nr
Match: gi|449441734|ref|XP_004138637.1| (PREDICTED: uncharacterized protein LOC101215741 [Cucumis sativus])

HSP 1 Score: 400.2 bits (1027), Expect = 3.7e-108
Identity = 221/263 (84.03%), Postives = 232/263 (88.21%), Query Frame = 1 

Query: 96  MAID-AVSPDIPVAAMSPRISFSHDFCHNEAIPVEQRPNSRSKSSGFNSSFDFDFCIPEC 155
           MAI+ AVS DIPV AMSPRISFSHDF H E IPVEQRPNSRSKSSGF SSFDFDFCIPEC
Sbjct: 1   MAIETAVSSDIPVPAMSPRISFSHDFSHTEPIPVEQRPNSRSKSSGFGSSFDFDFCIPEC 60

Query: 156 SDQESSSADEFFSHGKILPLEIKKKPE-ERLDHFS----SPSLTRTKSLDLNAEKCLKKD 215
           SD ESSSADE FS GKILPLEIKKKPE +RL+H S    SP LTRTKSLDLN EKCLKK+
Sbjct: 61  SDHESSSADEIFSQGKILPLEIKKKPEDQRLEHSSLNHHSPPLTRTKSLDLNPEKCLKKN 120

Query: 216 RSLKEIKATSSDSEEKQSSNSNSKSFWRFKRSSSCGSGYTRSLCPLPLLSRSNSTGSAS- 275
            SLKEIK T SDSEEKQ++NSNSKSFWRFKRSSSCGSGYTRSLCPLPLLSRSNSTGSAS 
Sbjct: 121 PSLKEIKGTGSDSEEKQNTNSNSKSFWRFKRSSSCGSGYTRSLCPLPLLSRSNSTGSASN 180

Query: 276 NIKRTPLSKDGVNQKQSSHRNASKNSLQC--SSSFGYQKPPLKKVHGSYGNGVQVNPILN 335
           N+KR+PLSKDGVNQKQSSHRN  KNS QC  SSS G+QKPPL KVHGSYGNG++VNPILN
Sbjct: 181 NMKRSPLSKDGVNQKQSSHRNGLKNSQQCSSSSSTGFQKPPLNKVHGSYGNGIKVNPILN 240

Query: 336 VHSGNLFGLGSIFSSAKDRSKKK 350
           VHS NLFGLGSIFSSA DRSKKK
Sbjct: 241 VHSANLFGLGSIFSSAIDRSKKK 263

[Close]
BLAST of Lsi03G004390 vs. NCBI nr
Match: gi|659081291|ref|XP_008441254.1| (PREDICTED: uncharacterized protein LOC103485440 [Cucumis melo])

HSP 1 Score: 399.1 bits (1024), Expect = 8.2e-108
Identity = 222/263 (84.41%), Postives = 232/263 (88.21%), Query Frame = 1 

Query: 96  MAIDA-VSPDIPVAAMSPRISFSHDFCHNEAIPVEQRPNSRSKSSGFNSSFDFDFCIPEC 155
           MAI+A VSPDIPV AMSPRISFSHDF   E IPVEQRPNSRSKSSGF+SSFDFDFCIPEC
Sbjct: 1   MAIEAAVSPDIPVPAMSPRISFSHDFSLTEPIPVEQRPNSRSKSSGFSSSFDFDFCIPEC 60

Query: 156 SDQESSSADEFFSHGKILPLEIKKKPEER------LDHFSSPSLTRTKSLDLNAEKCLKK 215
           SD ESSSADE FSHGKILPLEIKKKPE++      L+H S P LTRTKSLDLN EKCLKK
Sbjct: 61  SDHESSSADEIFSHGKILPLEIKKKPEDQRLEHSSLNHHSPPPLTRTKSLDLNPEKCLKK 120

Query: 216 DRSLKEIKATSSDSEEKQSSNSNSKSFWRFKRSSSCGSGYTRSLCPLPLLSRSNSTGSAS 275
           D S KEIKAT SDSEEKQ++NSNSKSFWRFKRSSSCGSGYTRSLCPLPLLSRSNSTGS+S
Sbjct: 121 DPSFKEIKATGSDSEEKQNTNSNSKSFWRFKRSSSCGSGYTRSLCPLPLLSRSNSTGSSS 180

Query: 276 -NIKRTPLSKDGVNQKQSSHRNASKNSLQC-SSSFGYQKPPLKKVHGSYGNGVQVNPILN 335
            NIKRTPLSKDGVNQKQSS RN  KN  QC SSS G+QKPPLKKVHGSYGNGV+VNPILN
Sbjct: 181 NNIKRTPLSKDGVNQKQSS-RNGLKNLQQCSSSSTGFQKPPLKKVHGSYGNGVKVNPILN 240

Query: 336 VHSGNLFGLGSIFSSAKDRSKKK 350
           VHS NLFGLGSIFSSA DRSKKK
Sbjct: 241 VHSANLFGLGSIFSSAIDRSKKK 262

[Close]
BLAST of Lsi03G004390 vs. NCBI nr
Match: gi|590652784|ref|XP_007033242.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 245.0 bits (624), Expect = 2.0e-61
Identity = 146/261 (55.94%), Postives = 188/261 (72.03%), Query Frame = 1 

Query: 96  MAIDAVSPDIPVAAMSPRISFSHDFCHNEAIPVEQRPNSRSKSSGFNSSFDFDFCIPECS 155
           MA++  S +   + MSPRISFSHD CH + +PVEQRP  RSKSSG NSS DFDFC+ E  
Sbjct: 1   MAVELCSEN---SGMSPRISFSHDLCHFDVVPVEQRP-LRSKSSGLNSSIDFDFCVRESL 60

Query: 156 DQESSSADEFFSHGKILPLEIKKK--PEERLDHFSSP-SLTRTKSL--DLNAEKCLKKDR 215
           D +SSSADE FS GKILP EIKKK  P +++D  ++P  L R+ S+  D N  +  KK+ 
Sbjct: 61  DLQSSSADELFSDGKILPTEIKKKNVPSKQIDQSTAPLPLPRSNSVHDDANINETSKKES 120

Query: 216 SLKEIKATSSDSEEKQSSNSNSKSFWRFKRSSS--CGSGYTRSLCPLPLLSRSNSTGSAS 275
           S KE K T  ++ ++     +SKSFWRFKRSSS  CGSGY RSLCPLPLLSRSNSTGS  
Sbjct: 121 S-KENKITRDETGDEVDEKQSSKSFWRFKRSSSLNCGSGYGRSLCPLPLLSRSNSTGSTP 180

Query: 276 NIKRTPLSKDGVNQKQSSHRNASKNSLQCSSSFGYQKPPLKKVHGSYGNGVQVNPILNVH 335
           N+K+  +SKD  + KQ++ ++A+ +S + S+S  YQKPPL+K +  YGN VQVNP+LNV 
Sbjct: 181 NVKQASISKDSHHHKQNAQKHATNSSYKPSTS--YQKPPLRKSYKPYGNAVQVNPVLNVP 240

Query: 336 SGNLFGLGSIFSSAKDRSKKK 350
           SGN+FGLGSIF + KD++ +K
Sbjct: 241 SGNMFGLGSIFFTGKDKNHRK 254

[Close]
BLAST of Lsi03G004390 vs. NCBI nr
Match: gi|950930908|ref|XP_014505678.1| (PREDICTED: uncharacterized protein LOC106765526 [Vigna radiata var. radiata])

HSP 1 Score: 237.3 bits (604), Expect = 4.1e-59
Identity = 144/268 (53.73%), Postives = 182/268 (67.91%), Query Frame = 1 

Query: 96  MAIDAVSPDIPVAAMSPRISFSHDFCHNEAIPVEQRPNSRSKSSGFNSSFDFDFCIPECS 155
           M ++  S +  V++MSPRISFSHDF  ++ IPVE+ P  RS SSG +SS DF+FC+ E  
Sbjct: 1   MVVELCSENCGVSSMSPRISFSHDFSQSDVIPVEKHP-LRSNSSGLSSSIDFNFCVQESL 60

Query: 156 DQESSSADEFFSHGKILPLEIKKK---------PEERLDHFSSPSLTRTKSLDLNAEKCL 215
           + ESSSADE FSHG ILP +IKKK           ++L   S P L  +K++  NA    
Sbjct: 61  ELESSSADELFSHGVILPTQIKKKGLSNVVMKQKSQQLAPPSQPPLPPSKAICENAPATT 120

Query: 216 KKDRSLKEIKATSSDSEEKQSSNSNSKSFWRFKRSSSCGSGYTRSLCPLPLLSRSNSTGS 275
           +K  S KE    S D  E+     +SKSFWRFKRSSSCGSGY RSLCPLPLLSRSNSTGS
Sbjct: 121 RKS-SKKESHKDSKDLNEEADEKHSSKSFWRFKRSSSCGSGYGRSLCPLPLLSRSNSTGS 180

Query: 276 AS-NIKRTPLSKDGVNQKQSSHRNASKNSLQCSSSF----GYQKPPLKKVHGSYGNGVQV 335
           +S ++KR PLSK+G + KQ+S + +S  S   S S      +QKPPLK+ HGSY NG++V
Sbjct: 181 SSPSVKRIPLSKEGHHVKQNSQKRSSSISRSQSQSLASHNNHQKPPLKRSHGSYTNGIRV 240

Query: 336 NPILNVHSGNLFGLGSIFSSAKDRSKKK 350
           +P+LNV S NLFG GSIFS+ +D+SKKK
Sbjct: 241 SPVLNVPSANLFGFGSIFSNNRDKSKKK 266

[Close]
BLAST of Lsi03G004390 vs. NCBI nr
Match: gi|920716034|gb|KOM56122.1| (hypothetical protein LR48_Vigan10g201400 [Vigna angularis])

HSP 1 Score: 236.9 bits (603), Expect = 5.4e-59
Identity = 141/266 (53.01%), Postives = 181/266 (68.05%), Query Frame = 1 

Query: 96  MAIDAVSPDIPVAAMSPRISFSHDFCHNEAIPVEQRPNSRSKSSGFNSSFDFDFCIPECS 155
           M ++  S +  V++MSPRISFSHDF  ++ IPVE+ P  RS SSG +SS DF+FC+ E  
Sbjct: 1   MVVELCSENCGVSSMSPRISFSHDFSQSDVIPVEKHP-LRSNSSGLSSSIDFNFCVQESL 60

Query: 156 DQESSSADEFFSHGKILPLEIKK--------KPEERLDHFSSPSLTRTKSLDLNAEKCLK 215
           + ESSSADE FSHG ILP +IKK        +  ++L   S P L  +K++  NA    +
Sbjct: 61  ELESSSADELFSHGVILPTQIKKGLNNVVLKQKSQQLAPPSQPPLPPSKAVCDNAPATTR 120

Query: 216 KDRSLKEIKATSSDSEEKQSSNSNSKSFWRFKRSSSCGSGYTRSLCPLPLLSRSNSTGSA 275
           K  S KE    S D  E+     +SKSFWRFKRSSSCGSGY RSLCPLPLLSRSNSTGS+
Sbjct: 121 KS-SKKESHKDSKDLNEEADEKHSSKSFWRFKRSSSCGSGYGRSLCPLPLLSRSNSTGSS 180

Query: 276 SNIKRTPLSKDGVNQKQSSHRNASKNS----LQCSSSFGYQKPPLKKVHGSYGNGVQVNP 335
            ++KR PLSK+G + KQ+S + +S  S       +S   +QKPPLK+ HGSY NG++V+P
Sbjct: 181 PSVKRIPLSKEGHHVKQNSQKRSSSISRSHPQSLASHNNHQKPPLKRSHGSYANGIRVSP 240

Query: 336 ILNVHSGNLFGLGSIFSSAKDRSKKK 350
           +LNV S NLFG GSIFS+ +D+SKKK
Sbjct: 241 VLNVPSANLFGFGSIFSNNRDKSKKK 264

The following BLAST results are available for this feature:
BLAST of Lsi03G004390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi03G004390 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMU8_CUCSA2.6e-10884.03Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404800 PE=4 SV=1[more]
E5GB42_CUCME5.7e-10884.41Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A061EHT9_THECC1.4e-6155.94Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_019429 PE=4 SV=1[more]
A0A0L9VMK0_PHAAN3.8e-5953.01Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g201400 PE=4 SV=1[more]
A0A0S3T9Q9_PHAAN3.8e-5953.01Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G092200 PE=... [more]
BLAST of Lsi03G004390 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67050.11.0e-4746.55 unknown protein[more]
AT1G48780.11.9e-1735.63 unknown protein[more]
AT5G38320.16.9e-1238.73 unknown protein[more]
AT1G68330.12.6e-1134.12 unknown protein[more]
AT3G18300.11.7e-1032.85 unknown protein[more]
BLAST of Lsi03G004390 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449441734|ref|XP_004138637.1|3.7e-10884.03PREDICTED: uncharacterized protein LOC101215741 [Cucumis sativus][more]
gi|659081291|ref|XP_008441254.1|8.2e-10884.41PREDICTED: uncharacterized protein LOC103485440 [Cucumis melo][more]
gi|590652784|ref|XP_007033242.1|2.0e-6155.94Uncharacterized protein isoform 1 [Theobroma cacao][more]
gi|950930908|ref|XP_014505678.1|4.1e-5953.73PREDICTED: uncharacterized protein LOC106765526 [Vigna radiata var. radiata][more]
gi|920716034|gb|KOM56122.1|5.4e-5953.01hypothetical protein LR48_Vigan10g201400 [Vigna angularis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G004390.1Lsi03G004390.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31722FAMILY NOT NAMEDcoord: 74..349
score: 1.5
NoneNo IPR availablePANTHERPTHR31722:SF10F1O19.11 PROTEINcoord: 74..349
score: 1.5