Lsi03G004320 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G004320
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_8
Location	chr03 : 4898019 .. 4898909 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATCAATTCCAGATCGTTTCTGTTTCCTCTTCTTCGCCTCTACTTCCCTTTCTTGCTCCTCACCTCTCCTGCTTTCTCTTCCTCTGCTTATGGTGAATTTAAATGGTACTTCAACTGCAATGATCGTGCTCCGTCGAAATGCGAGAGTATTAGTTCGATGGAAATTCCTCTCTGGAGAAATAATGGAACAGATATTTGCGGTGGTCATCTCGAGTCAATGAAGATGAAATGCGATGGAGACCGTGCAACCATAGAAATTGTGGGAGAAAACTACGAACTCCTGGGTTTTAGTATAAACGATCAAATTCTTCTAATAGCTGAATTCGGCTTTTCAGATCGATTTTGCTTGCGAGAAAAAAATATTTCGTCAAGTTCCATCAATGCGATGATTCCTGTATCTAATGACTGCGGGCATCCCCAAACAGCAGTCAAACCTGCTTGTTCTGGAACTGAATTTGTGTACAAGCCATTGCCAATTCCATTTGGAAACAACAAAGGGAAAAACCCTGATGAATATTGTTGGTTAAGTGCAGTAGTGCCAATTTCACAACGGATGCTAAAAGAAGTTGGTGATGATTGGCAAGAGGTAGCGCAGCATATCATAAAAGAGTTTAACTCAGACCGGAAGGTAGCCGGTCATGTATGTAGCAATAGCAACTGCAAAGATCCTGGTGGTGTTTATGTTTATGACTTGCAATCGAATCAAACAAGATGCTGCTGTCCATCTTCAGTTAATGGGATTGAACACTGTCTTTCCTCACCTGTTACTGAATCGCCAAAAAAGGCTGATGCGCCAAAAACAGCACCTCCCTACGGTACGTACACAAACTTTATCCTCAACTGTTCTTGTTTTCCCTTCAAAATTTATGCAATAGTACTGTTCTAA

mRNA sequence

ATGGAGATCAATTCCAGATCGTTTCTGTTTCCTCTTCTTCGCCTCTACTTCCCTTTCTTGCTCCTCACCTCTCCTGCTTTCTCTTCCTCTGCTTATGGTGAATTTAAATGGTACTTCAACTGCAATGATCGTGCTCCGTCGAAATGCGAGAGTATTAGTTCGATGGAAATTCCTCTCTGGAGAAATAATGGAACAGATATTTGCGGTGGTCATCTCGAGTCAATGAAGATGAAATGCGATGGAGACCGTGCAACCATAGAAATTGTGGGAGAAAACTACGAACTCCTGGGTTTTAGTATAAACGATCAAATTCTTCTAATAGCTGAATTCGGCTTTTCAGATCGATTTTGCTTGCGAGAAAAAAATATTTCGTCAAGTTCCATCAATGCGATGATTCCTGTATCTAATGACTGCGGGCATCCCCAAACAGCAGTCAAACCTGCTTGTTCTGGAACTGAATTTGTGTACAAGCCATTGCCAATTCCATTTGGAAACAACAAAGGGAAAAACCCTGATGAATATTGTTGGTTAAGTGCAGTAGTGCCAATTTCACAACGGATGCTAAAAGAAGTTGGTGATGATTGGCAAGAGGTAGCGCAGCATATCATAAAAGAGTTTAACTCAGACCGGAAGGTAGCCGGTCATGTATGTAGCAATAGCAACTGCAAAGATCCTGGTGGTGTTTATGTTTATGACTTGCAATCGAATCAAACAAGATGCTGCTGTCCATCTTCAGTTAATGGGATTGAACACTGTCTTTCCTCACCTGTTACTGAATCGCCAAAAAAGGCTGATGCGCCAAAAACAGCACCTCCCTACGGTACGTACACAAACTTTATCCTCAACTGTTCTTGTTTTCCCTTCAAAATTTATGCAATAGTACTGTTCTAA

Coding sequence (CDS)

ATGGAGATCAATTCCAGATCGTTTCTGTTTCCTCTTCTTCGCCTCTACTTCCCTTTCTTGCTCCTCACCTCTCCTGCTTTCTCTTCCTCTGCTTATGGTGAATTTAAATGGTACTTCAACTGCAATGATCGTGCTCCGTCGAAATGCGAGAGTATTAGTTCGATGGAAATTCCTCTCTGGAGAAATAATGGAACAGATATTTGCGGTGGTCATCTCGAGTCAATGAAGATGAAATGCGATGGAGACCGTGCAACCATAGAAATTGTGGGAGAAAACTACGAACTCCTGGGTTTTAGTATAAACGATCAAATTCTTCTAATAGCTGAATTCGGCTTTTCAGATCGATTTTGCTTGCGAGAAAAAAATATTTCGTCAAGTTCCATCAATGCGATGATTCCTGTATCTAATGACTGCGGGCATCCCCAAACAGCAGTCAAACCTGCTTGTTCTGGAACTGAATTTGTGTACAAGCCATTGCCAATTCCATTTGGAAACAACAAAGGGAAAAACCCTGATGAATATTGTTGGTTAAGTGCAGTAGTGCCAATTTCACAACGGATGCTAAAAGAAGTTGGTGATGATTGGCAAGAGGTAGCGCAGCATATCATAAAAGAGTTTAACTCAGACCGGAAGGTAGCCGGTCATGTATGTAGCAATAGCAACTGCAAAGATCCTGGTGGTGTTTATGTTTATGACTTGCAATCGAATCAAACAAGATGCTGCTGTCCATCTTCAGTTAATGGGATTGAACACTGTCTTTCCTCACCTGTTACTGAATCGCCAAAAAAGGCTGATGCGCCAAAAACAGCACCTCCCTACGGTACGTACACAAACTTTATCCTCAACTGTTCTTGTTTTCCCTTCAAAATTTATGCAATAGTACTGTTCTAA

Protein sequence

MEINSRSFLFPLLRLYFPFLLLTSPAFSSSAYGEFKWYFNCNDRAPSKCESISSMEIPLWRNNGTDICGGHLESMKMKCDGDRATIEIVGENYELLGFSINDQILLIAEFGFSDRFCLREKNISSSSINAMIPVSNDCGHPQTAVKPACSGTEFVYKPLPIPFGNNKGKNPDEYCWLSAVVPISQRMLKEVGDDWQEVAQHIIKEFNSDRKVAGHVCSNSNCKDPGGVYVYDLQSNQTRCCCPSSVNGIEHCLSSPVTESPKKADAPKTAPPYGTYTNFILNCSCFPFKIYAIVLF

Homology

[Close]

BLAST of Lsi03G004320 vs. TrEMBL
Match: A0A0A0LQ35_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404850 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.6e-61
Identity = 149/275 (54.18%), Postives = 172/275 (62.55%), Query Frame = 1


Query: 1   MEINSRSFLFPLLRLYFPFLLLTSPAFSSSAYGEFKWYFNCNDRAPSKCESISSMEIPL- 60
           MEIN    LF  L L+   LLLTSPA SSS Y +  W+FNC  + P  C SI     PL 
Sbjct: 1   MEINP---LFSPLFLFIT-LLLTSPASSSSVYDQ--WFFNC--QYPFNCGSILHNRYPLL 60

Query: 61  WRNNGTDICGGHLESMKMKCDGDRATIEIVGENYELLGFSINDQILLIAEFGFSDRFCLR 120
           WR NGT+ CGG+ E MK+ CD    TIEIVG NYE+LGFS+NDQIL+IAE G+S RFC  
Sbjct: 61  WRYNGTEFCGGYPEPMKLNCDRSPVTIEIVGANYEILGFSMNDQILIIAEIGYSYRFCSL 120

Query: 121 EKNISSSSINAMIPVSNDCGHPQTAVKPACSGTEFVYKPLPIPFGNNKGKNPD-EYCWLS 180
             N  S+SI A+IPVS DC +PQ+  +P CS  EF Y P           NPD  YCWLS
Sbjct: 121 GNNSLSTSIYAIIPVSYDCPNPQSE-RPTCSRNEFRYMPF----------NPDVNYCWLS 180

Query: 181 AVVPISQRMLKEVGDDWQEVAQHIIKEFNS-DRKVAGHVCSNSNCKDPGGVYVYDLQSNQ 240
            VVP S   ++EV  D Q+VA H I EF    RKV G VC  S+CK+ GG+Y YDLQ  Q
Sbjct: 181 LVVPWS---VEEVRGDLQKVA-HDISEFKKPGRKVDGQVC--SHCKERGGLYFYDLQLGQ 240

Query: 241 TRCCCPSSVNGIEHCLSSPVTESPKKADAPKTAPP 273
           TRCCC  S  GI  C SS VT+SP  AD PKTA P
Sbjct: 241 TRCCCQFSSIGIASCSSSSVTQSPNYADEPKTALP 250

[Close]

BLAST of Lsi03G004320 vs. TrEMBL
Match: A0A059BR95_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02098 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.3e-07
Identity = 63/264 (23.86%), Postives = 100/264 (37.88%), Query Frame = 1


Query: 22  LTSPAFSSSAYGEFKWYFNCNDRAPSKCESISSMEIPLWRNNGTDICGGHLESMKMKCDG 81
           +T    +   Y +  + FNC +        I  +  P W  N  + CG    ++++ C+ 
Sbjct: 1   MTQSQGNDDLYSKCSYLFNCGN--------IQDVGFPFWGGNRPNSCGH--PALQLACED 60

Query: 82  DRATIEIVGENYELLGFSINDQILLIAEFGFSDRFCLREKNISS------SSIN--AMIP 141
           D A+I I    Y++L    N ++L IA   FS   C  +   ++      S +N  +   
Sbjct: 61  DAASITISNVKYKVLDIDHNSEVLNIAREDFSTGICSPDFTNTTFDPALFSMVNGYSNFT 120

Query: 142 VSNDC-GHPQTAVKPAC--SGTEFVYKPLPIPFGNNKGKNPDEYCWLSAVVPISQRMLKE 201
           +   C G P      +C  SG   +Y      +G      P   C  S V+PIS+ +L +
Sbjct: 121 IIYGCPGVPSARNSFSCTISGRGTIY-----GYGAPGALGPGS-CSESVVIPISRNLLSQ 180

Query: 202 VGDDWQEVAQHIIKEFNSDRKVAGHVCSNSNCKDPGGVYVYDLQSNQTRCCCPSSVNGIE 261
           +      +     + F    +V    C    C    GV  Y +  N T C C    +   
Sbjct: 181 LAYGMVSLEVTGKQGFEVRLEVDSATC--KRCAHSKGVCGYYISKNTTACYCADGSSASA 239

Query: 262 HCLSSPVTESPKKADAPKTAPPYG 275
            C       SP  AD P+  PP G
Sbjct: 241 IC-------SPSAADGPQGQPPQG 239

[Close]

BLAST of Lsi03G004320 vs. TrEMBL
Match: A0A067DKW0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023544mg PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.1e-06
Identity = 66/267 (24.72%), Postives = 95/267 (35.58%), Query Frame = 1


Query: 35  FKWYFNCNDRAPSKCESISSMEI------PLWRNNGTDICGGHLESMKMKCDGDRATIEI 94
           F  Y N ++ A SKC +  S  I      P WRN+  D CG      K+ C G+RATI+I
Sbjct: 24  FSGYVNVSEEAYSKCSASFSCGIFTGIGYPFWRNDQPDYCGH--PGFKLDCQGERATIDI 83

Query: 95  VGENYELLGFSINDQILLIAEFGFSDRFCLREKNISSSSINAM--------IPVSNDCGH 154
             + Y++       Q+L IA+  F    CL     S+   N            +  DC H
Sbjct: 84  NFQKYDINEIYHESQVLRIAKTDFMLNICLVSFINSTLDFNLFEYTLSDQNASLLYDCDH 143

Query: 155 -------PQTAVKPACSGTEFVYKPLPIPFGNNKGKNPDEYCWLSAVVPISQRMLKEVGD 214
                   Q    P  +     Y   P    +   +     C +S ++P+ +       +
Sbjct: 144 LTEEQPRKQEFTCPIDNRPSECYFTAPAISSDELSRR----CKISLLIPVLEIFADHFTN 203

Query: 215 DWQEVAQHIIKEFNSDRKVAGHVCSNSNCKDPGGVYVYDLQSNQTRCCCPSSVNGIEHCL 274
               + Q I + F     +    C   +C   GG   Y+   N   C CP   +      
Sbjct: 204 YLMTIDQVIKEGFEVRWIIDQEQC--RDCLISGGKCGYNRTINDFTCLCPYQPSPRTCFR 263

Query: 275 SSPVTESPKKADAPKTAPPYGTYTNFI 281
             P   S   A  P TAP   T   FI
Sbjct: 264 MQPPANS--AAANPSTAPGMHTRYFFI 280

[Close]

BLAST of Lsi03G004320 vs. TrEMBL
Match: W9S0Y3_9ROSA (Putative receptor-like protein kinase OS=Morus notabilis GN=L484_027073 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 9.1e-06
Identity = 68/259 (26.25%), Postives = 110/259 (42.47%), Query Frame = 1


Query: 13  LRLYFPFLLLTSPAFSSSAYGEFKWYFNCNDRAPSKCESISSMEIPLWRNNGTDICGGHL 72
           L + F F LL       SA   F WY  C+++   +C +I + + P   +   + CG   
Sbjct: 12  LLVLFCFALLIFDKIPLSA--SFGWYTTCSNKY--RCGAIEA-DFPFVGDGRPEGCGH-- 71

Query: 73  ESMKMKCDGDRATIEIVGENYELLGFSINDQILLIAEFGFSDRFCLREKNISS--SSINA 132
             +K+ C+ + ATI I G  Y++L    N QI  IA   + +  C+ +   +S    +  
Sbjct: 72  PGLKLNCEKNNATIYIKGVKYQVLEVDQNAQIFKIARTDYMNGICVPQYGNTSLDPELFE 131

Query: 133 MIPVSND------CGHPQTA----VKPACSGTEFVYKPLPIPFGNNKGKNPDEYC--WLS 192
             P S D      C   + +       + SG  F+   LP   GN+     +  C   + 
Sbjct: 132 YAPASGDITLLYGCSPEKNSYIGGFNCSASGKGFI---LP---GNSTSGGAELVCRSRVI 191

Query: 193 AVVPISQRMLKEVGDDWQEVAQHIIKEFNSDRKVAGHVCSNSNCKDPGGVYVYDLQSNQT 252
           A VP   R   E+G +   +++ + + F    KV    C    CK+  GV  YD + NQT
Sbjct: 192 ARVPDPVRNYGELG-NVSVISKALAEGFPVKYKVDFEAC--EECKNSSGVCGYDGRLNQT 251

Query: 253 RCCCPSSVN-GIEHCLSSP 257
            C C + ++ G   C  +P
Sbjct: 252 TCYCQNELSLGNRTCPPTP 254

[Close]

BLAST of Lsi03G004320 vs. NCBI nr
Match: gi|700208015|gb|KGN63134.1| (hypothetical protein Csa_2G404850 [Cucumis sativus])

HSP 1 Score: 243.8 bits (621), Expect = 3.7e-61
Identity = 149/275 (54.18%), Postives = 172/275 (62.55%), Query Frame = 1


Query: 1   MEINSRSFLFPLLRLYFPFLLLTSPAFSSSAYGEFKWYFNCNDRAPSKCESISSMEIPL- 60
           MEIN    LF  L L+   LLLTSPA SSS Y +  W+FNC  + P  C SI     PL 
Sbjct: 1   MEINP---LFSPLFLFIT-LLLTSPASSSSVYDQ--WFFNC--QYPFNCGSILHNRYPLL 60

Query: 61  WRNNGTDICGGHLESMKMKCDGDRATIEIVGENYELLGFSINDQILLIAEFGFSDRFCLR 120
           WR NGT+ CGG+ E MK+ CD    TIEIVG NYE+LGFS+NDQIL+IAE G+S RFC  
Sbjct: 61  WRYNGTEFCGGYPEPMKLNCDRSPVTIEIVGANYEILGFSMNDQILIIAEIGYSYRFCSL 120

Query: 121 EKNISSSSINAMIPVSNDCGHPQTAVKPACSGTEFVYKPLPIPFGNNKGKNPD-EYCWLS 180
             N  S+SI A+IPVS DC +PQ+  +P CS  EF Y P           NPD  YCWLS
Sbjct: 121 GNNSLSTSIYAIIPVSYDCPNPQSE-RPTCSRNEFRYMPF----------NPDVNYCWLS 180

Query: 181 AVVPISQRMLKEVGDDWQEVAQHIIKEFNS-DRKVAGHVCSNSNCKDPGGVYVYDLQSNQ 240
            VVP S   ++EV  D Q+VA H I EF    RKV G VC  S+CK+ GG+Y YDLQ  Q
Sbjct: 181 LVVPWS---VEEVRGDLQKVA-HDISEFKKPGRKVDGQVC--SHCKERGGLYFYDLQLGQ 240

Query: 241 TRCCCPSSVNGIEHCLSSPVTESPKKADAPKTAPP 273
           TRCCC  S  GI  C SS VT+SP  AD PKTA P
Sbjct: 241 TRCCCQFSSIGIASCSSSSVTQSPNYADEPKTALP 250

[Close]

BLAST of Lsi03G004320 vs. NCBI nr
Match: gi|778673100|ref|XP_011649927.1| (PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X2 [Cucumis sativus])

HSP 1 Score: 243.8 bits (621), Expect = 3.7e-61
Identity = 149/275 (54.18%), Postives = 172/275 (62.55%), Query Frame = 1


Query: 1   MEINSRSFLFPLLRLYFPFLLLTSPAFSSSAYGEFKWYFNCNDRAPSKCESISSMEIPL- 60
           MEIN    LF  L L+   LLLTSPA SSS Y +  W+FNC  + P  C SI     PL 
Sbjct: 1   MEINP---LFSPLFLFIT-LLLTSPASSSSVYDQ--WFFNC--QYPFNCGSILHNRYPLL 60

Query: 61  WRNNGTDICGGHLESMKMKCDGDRATIEIVGENYELLGFSINDQILLIAEFGFSDRFCLR 120
           WR NGT+ CGG+ E MK+ CD    TIEIVG NYE+LGFS+NDQIL+IAE G+S RFC  
Sbjct: 61  WRYNGTEFCGGYPEPMKLNCDRSPVTIEIVGANYEILGFSMNDQILIIAEIGYSYRFCSL 120

Query: 121 EKNISSSSINAMIPVSNDCGHPQTAVKPACSGTEFVYKPLPIPFGNNKGKNPD-EYCWLS 180
             N  S+SI A+IPVS DC +PQ+  +P CS  EF Y P           NPD  YCWLS
Sbjct: 121 GNNSLSTSIYAIIPVSYDCPNPQSE-RPTCSRNEFRYMPF----------NPDVNYCWLS 180

Query: 181 AVVPISQRMLKEVGDDWQEVAQHIIKEFNS-DRKVAGHVCSNSNCKDPGGVYVYDLQSNQ 240
            VVP S   ++EV  D Q+VA H I EF    RKV G VC  S+CK+ GG+Y YDLQ  Q
Sbjct: 181 LVVPWS---VEEVRGDLQKVA-HDISEFKKPGRKVDGQVC--SHCKERGGLYFYDLQLGQ 240

Query: 241 TRCCCPSSVNGIEHCLSSPVTESPKKADAPKTAPP 273
           TRCCC  S  GI  C SS VT+SP  AD PKTA P
Sbjct: 241 TRCCCQFSSIGIASCSSSSVTQSPNYADEPKTALP 250

[Close]

BLAST of Lsi03G004320 vs. NCBI nr
Match: gi|659066768|ref|XP_008460391.1| (PREDICTED: uncharacterized protein LOC103499200 isoform X1 [Cucumis melo])

HSP 1 Score: 159.8 bits (403), Expect = 7.1e-36
Identity = 100/237 (42.19%), Postives = 136/237 (57.38%), Query Frame = 1


Query: 2   EINSRSFLFPLLRLYFPFLLL---TSPAFSSSAYGEFKWYFNCNDRAPSKCESISSMEIP 61
           +++SRSF F L +L    LLL    S   +S+ + E  W+FNCN    SKC      E+P
Sbjct: 41  KLDSRSFPFLLSQLSLALLLLILLNSAPANSAVHDE--WFFNCNS---SKC---ILNELP 100

Query: 62  LWRNNGTDICG--GHLESMKMKCDGDRATIEIVGENYELLGFSINDQILLIAEFGFSDRF 121
            WR NGT+ C   G+  +M ++CDG  A IEI G  Y++LG S  D+  ++AE GFSDRF
Sbjct: 101 FWRYNGTETCNRVGYDGTMALRCDGVLAIIEIKGVEYQILGHSRFDRFFILAEIGFSDRF 160

Query: 122 CLREKNISSSSINAMIPVSNDCG--HPQTAVKPACSGTEFVYKPLPIPFGNNKGKNPDEY 181
           C  +KNISSSS+   I + ++CG   P     P CS  E+ Y    IP  NN   + D  
Sbjct: 161 CSPDKNISSSSMFLTISLYSNCGSSQPLPPYTPTCSEAEYSY----IPDENNVLLSND-M 220

Query: 182 CWLSAVVPISQRMLKEVGDDWQEVAQHIIKEFNSDRKVAGHVCSNSNCKDPGGVYVY 232
           CW+S V PI Q +LK+VGDD+Q+VAQHI   F S R V  +   + +   P  V++Y
Sbjct: 221 CWISVVAPIPQWLLKQVGDDFQKVAQHITAHFKSGRTV--NAQQHHDLLHPDRVFIY 262

[Close]

BLAST of Lsi03G004320 vs. NCBI nr
Match: gi|659066772|ref|XP_008460514.1| (PREDICTED: uncharacterized protein LOC103499200 isoform X2 [Cucumis melo])

HSP 1 Score: 143.3 bits (360), Expect = 6.9e-31
Identity = 88/203 (43.35%), Postives = 119/203 (58.62%), Query Frame = 1


Query: 2   EINSRSFLFPLLRLYFPFLLL---TSPAFSSSAYGEFKWYFNCNDRAPSKCESISSMEIP 61
           +++SRSF F L +L    LLL    S   +S+ + E  W+FNCN    SKC      E+P
Sbjct: 41  KLDSRSFPFLLSQLSLALLLLILLNSAPANSAVHDE--WFFNCNS---SKC---ILNELP 100

Query: 62  LWRNNGTDICG--GHLESMKMKCDGDRATIEIVGENYELLGFSINDQILLIAEFGFSDRF 121
            WR NGT+ C   G+  +M ++CDG  A IEI G  Y++LG S  D+  ++AE GFSDRF
Sbjct: 101 FWRYNGTETCNRVGYDGTMALRCDGVLAIIEIKGVEYQILGHSRFDRFFILAEIGFSDRF 160

Query: 122 CLREKNISSSSINAMIPVSNDCG--HPQTAVKPACSGTEFVYKPLPIPFGNNKGKNPDEY 181
           C  +KNISSSS+   I + ++CG   P     P CS  E+ Y    IP  NN   + D  
Sbjct: 161 CSPDKNISSSSMFLTISLYSNCGSSQPLPPYTPTCSEAEYSY----IPDENNVLLSND-M 220

Query: 182 CWLSAVVPISQRMLKEVGDDWQE 198
           CW+S V PI Q +LK+VGDD+Q+
Sbjct: 221 CWISVVAPIPQWLLKQVGDDFQK 230

[Close]

BLAST of Lsi03G004320 vs. NCBI nr
Match: gi|1009126063|ref|XP_015879948.1| (PREDICTED: probable receptor-like protein kinase At1g67000 [Ziziphus jujuba])

HSP 1 Score: 76.6 bits (187), Expect = 7.9e-11
Identity = 86/291 (29.55%), Postives = 124/291 (42.61%), Query Frame = 1


Query: 3   INSR--SFLFPLLRLYFPFLLLTSPAFSSSAYGEFKWYFNCNDRAPSKCESISSMEIPLW 62
           +NSR  S  FPL  L F  LL+T   F  S   E+ W+ +C +R    C +I+ ++ P W
Sbjct: 1   MNSRLPSSSFPLHLLSFCLLLVTIK-FPPSWSLEY-WFRDCLNRF--NCGNITGVDYPFW 60

Query: 63  RNNGTDICGGHLESMKMKCDGDRATIEIVGENYELLGFSINDQILLIAEFGFSDR-FCLR 122
               T+ CG     + ++C+  ++TIEI+   Y++LG   N QIL I    FS+  FC  
Sbjct: 61  GVGRTEGCG--YPHLHLQCNESKSTIEIMDVKYKILGIDQNAQILQITREDFSNNLFCSP 120

Query: 123 EKNISSSSIN--------AMIPVSNDC---------GH----PQTAVKPACSGTEFVYKP 182
           +   ++  ++        A I +  DC         GH     Q+  K    GTE     
Sbjct: 121 KYPNTTFDLHQFEYAPDFAEITIYYDCPPALQGNMTGHFNCTDQSTYKDGFIGTE----- 180

Query: 183 LPIPFGNNKGKNPDEYCWLSAVVPISQRMLKEVGDDWQEVAQHIIKEFNSDRKVAGHVCS 242
                 NN G      C  S    I Q    ++G D   + + +I  F    KV   +C 
Sbjct: 181 ----PQNNMG------CNSSLKFGIRQSYFGDIG-DLPIMREALIDGFGLKYKVDTGLC- 240

Query: 243 NSNCKDPGGVYVYDLQSNQTRCCCPSSVNGIEHC-LSSPVTESPKKADAPK 269
            +NC   GG   YDL S Q  C C    +G   C   SP T   K +D+ K
Sbjct: 241 -NNCTKSGGACGYDLDSKQPTCYCEGGSSGQRPCPPPSPTTAQKKGSDSIK 267

The following BLAST results are available for this feature:

BLAST of Lsi03G004320 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi03G004320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ35_CUCSA	2.6e-61	54.18	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404850 PE=4 SV=1	[more]
A0A059BR95_EUCGR	1.3e-07	23.86	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02098 PE=4 SV=1	[more]
A0A067DKW0_CITSI	4.1e-06	24.72	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023544mg PE=4 SV=1	[more]
W9S0Y3_9ROSA	9.1e-06	26.25	Putative receptor-like protein kinase OS=Morus notabilis GN=L484_027073 PE=4 SV=...	[more]

BLAST of Lsi03G004320 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Lsi03G004320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700208015\|gb\|KGN63134.1\|	3.7e-61	54.18	hypothetical protein Csa_2G404850 [Cucumis sativus]	[more]
gi\|778673100\|ref\|XP_011649927.1\|	3.7e-61	54.18	PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X2 [Cucumi...	[more]
gi\|659066768\|ref\|XP_008460391.1\|	7.1e-36	42.19	PREDICTED: uncharacterized protein LOC103499200 isoform X1 [Cucumis melo]	[more]
gi\|659066772\|ref\|XP_008460514.1\|	6.9e-31	43.35	PREDICTED: uncharacterized protein LOC103499200 isoform X2 [Cucumis melo]	[more]
gi\|1009126063\|ref\|XP_015879948.1\|	7.9e-11	29.55	PREDICTED: probable receptor-like protein kinase At1g67000 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G004320.1	Lsi03G004320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.90.75.10		coord: 205..252 score: 8.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi03G004320	CSPI02G25280	Wild cucumber (PI 183967)	cpilsiB113
Lsi03G004320	CmaCh15G000530	Cucurbita maxima (Rimu)	cmalsiB276
Lsi03G004320	CmoCh15G000540	Cucurbita moschata (Rifu)	cmolsiB265
Lsi03G004320	Cla011871	Watermelon (97103) v1	lsiwmB275
Lsi03G004320	MELO3C008148	Melon (DHL92) v3.5.1	lsimeB259
Lsi03G004320	Bhi04G002025	Wax gourd	lsiwgoB322
Lsi03G004320	Carg22844	Silver-seed gourd	carlsiB986

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G004320	Melon (DHL92) v3.6.1	lsimedB272
Lsi03G004320	Silver-seed gourd	carlsiB017
Lsi03G004320	Cucumber (Chinese Long) v3	cuclsiB127
Lsi03G004320	Watermelon (97103) v2	lsiwmbB224
Lsi03G004320	Cucumber (Gy14) v1	cgylsiB098
Lsi03G004320	Cucurbita maxima (Rimu)	cmalsiB656
Lsi03G004320	Cucurbita moschata (Rifu)	cmolsiB645
Lsi03G004320	Cucurbita pepo (Zucchini)	cpelsiB143
Lsi03G004320	Cucurbita pepo (Zucchini)	cpelsiB339
Lsi03G004320	Cucumber (Chinese Long) v2	culsiB115
Lsi03G004320	Watermelon (Charleston Gray)	lsiwcgB227
Lsi03G004320	Cucumber (Gy14) v2	cgyblsiB102