Lsi03G003980 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G003980
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Zinc finger protein
Location	chr03 : 4564822 .. 4567175 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATTTTAAAAGTAGAAAATTTCGGGTCGGAGCTTCTGCTGGGTGGATCTAAACGGGAAGCCACGGGGTCGAGCCCCGATCAGGCGGTTTCGTCGATTCGTTGAAGGTTGATTAGAGTCCCTTTGGCCTTCAGCCGTTCAAAGTTCAAACCAAAATTGAAAAAAAAAAAATCTTTCGTCTGCAACGGTCCATTTCCCTGCCATGGAAGTTGAATCACAATCAGAGTTCCCGTACTGGAAGCCTTTCCAACGGAGGTTCGATCCCGATTCTCCGTTCTTTGCCTCTGGAAATGTCGAGCGGGAAATCTTAGCCAAACAGGTTTTTCTCTCTTTTGTTTACCCATATTGTTGCCCTTCTTCTAAATGCGTCTGTTTATTGCTAATTTTATCTGGTATTGTTGTCGTAACATGATTATCAGTATGTATGTCTGTTTGATGATGGAGCTTGCTAGGTTATCAGTTTTCTGTTTGTCGATTTCCAGTATTTTCATTATAATCCCTAAGGTTAACGCTCATGATATTCCATTTGTTCAATTTTGAAGGTTGCCTTGGATTTAACCGAAGATGAAAAGCTACAGCTGCATAATATGGCAGTTGATGCTAGCAGGTAAAGGTTTAATTTGCTATCTGCTCATATATTACCAAGTCTAAAGGACTCTTTAGAAGAGGAAAATTCATAGCGAAGTTTGAACTAGTTAGTTGTGATATTTATTAACTGTTTCTTTCTTTATTTTCAATAGTGTTTCGTTATTGAAATTGTTATCTGTATAGTGAAATCTTTTGCCCAATTGTTGGTTGCGGTGCACACTTGAAATCTCTGGATGACTTTGAAGATCATTACAATTCACGGCATACTGCCTCTTGTTCAGTTTGCCCTAGAGTTTACCCGACATCACGCTTACTTAGTTTACATGTGTCTGAGGCGCATGACGCGTTCTTTCAAGCAAAAGTTGCGCGTGGCTATGACATGGTATGTATCTTGAACTTGTTATCCTTCATATATTTCTGTGGTGCAGCCGTAATGCTTCTTACCTTACCGATCTATATATATATACAGAGAATTAGTTATGCTTCACATTGTCATTTTATCCAAGTTGGGGCTTTGATGCCTCCTGTGAAAGTTTCAATGGTTCATATATTATTCTTGCTCTGTATGATTATGATAGCAGCCTTGAGCATGAAACTTCTAACCATGGTTAGTGGGGAGGGATCAAAGCTTTAGATTTCATTGACTGAGCTACTAATGTTATTGTAATTAGATTTATTTTTCCAAATTCTTGGTCGAGAGTAACACCGAACTAGAAAAAAAACCAGCATTATTGTAACTGGATGACTGGATAAGTCATATGATCCCATCACTTTTGTAGGTAATATTATCACATCACTTGAAATTGGCTACTGGTTAATGTAACTTGAAACATTTAGCGTGTTCTTGTTAAATGGGTACCACTTTGGTTCATTGTCATTTTGTCTGATATAAAAGTATACCGTATGTCACAGTATGAATGCCTGGTGGAAGGTTGTGGTTTGAAGTTCAAAAGCTACAAAAGCAGACAGCAGCATCTAGTGGATAAGCATAAATTTTCTGCTTCATTTGAATTCTTTAAGAAAGCTCATCCATCTAAGAAACAAAGACAGAAATTACATCGTAAACAAGCCGTTCAAGGAAGGGAAGAAACCTCCGAAATGGAAGTTGAGAAGGAAACTATAGATGGCCTCATTTCAGGAGTATCTAAACTAAGTACTTCAGACTCAACTCCTTCGACAATCAGCTTTGGCCGGAGGCACACTCGAGGGTTAACATTTGTTCCTCGATCAGTTCAGCGAGAAAAAGTGTCAGACTCCTCAACAGCTGGAACGAAGAGATGAAAGTAGTGTATGTAGACCAAGTATGTCTGTCGTTTCTAGCATATCTGATTCCAACTTTTGCTGCATTACTGCATAGTTTTCATTGTTGGCCCTTCTCAAGGATATCTGGTTTTGCGGCATTTCAGAGTTGGATTTTTCTTTTTCTTTTCTTTTTTTTAATTTTCCATTTAATATTTGATCATTGACCTCATCGATGGTTGATTAATAGTCATTTTGTAGTTGGGATGTAACTTGAGATCATATGGGAAATGATAGGAAGATATTGAGTTTCAAGATGGCAGAACTCAAGATAACGATGTATCTAGATGGATTAGGGAGGATTAGTTGCTTTGTTATGTACTTCCAATAGACTGAACAATGAAGAAAATATTGGTACTATAAATGTTGGCTCTTAAAAGAGCTTGTGGAGACATAATGAGGAAGGTGTTTAGCTTATCAATTCAATTGAGATATAGAATACCAAGAAATAGAACTTCATTAAGTTG

mRNA sequence

ATAATTTTAAAAGTAGAAAATTTCGGGTCGGAGCTTCTGCTGGGTGGATCTAAACGGGAAGCCACGGGGTCGAGCCCCGATCAGGCGGTTTCGTCGATTCGTTGAAGGTTGATTAGAGTCCCTTTGGCCTTCAGCCGTTCAAAGTTCAAACCAAAATTGAAAAAAAAAAAATCTTTCGTCTGCAACGGTCCATTTCCCTGCCATGGAAGTTGAATCACAATCAGAGTTCCCGTACTGGAAGCCTTTCCAACGGAGGTTCGATCCCGATTCTCCGTTCTTTGCCTCTGGAAATGTCGAGCGGGAAATCTTAGCCAAACAGGTTGCCTTGGATTTAACCGAAGATGAAAAGCTACAGCTGCATAATATGGCAGTTGATGCTAGCAGTGAAATCTTTTGCCCAATTGTTGGTTGCGGTGCACACTTGAAATCTCTGGATGACTTTGAAGATCATTACAATTCACGGCATACTGCCTCTTGTTCAGTTTGCCCTAGAGTTTACCCGACATCACGCTTACTTAGTTTACATGTGTCTGAGGCGCATGACGCGTTCTTTCAAGCAAAAGTTGCGCGTGGCTATGACATGTATGAATGCCTGGTGGAAGGTTGTGGTTTGAAGTTCAAAAGCTACAAAAGCAGACAGCAGCATCTAGTGGATAAGCATAAATTTTCTGCTTCATTTGAATTCTTTAAGAAAGCTCATCCATCTAAGAAACAAAGACAGAAATTACATCGTAAACAAGCCGTTCAAGGAAGGGAAGAAACCTCCGAAATGGAAGTTGAGAAGGAAACTATAGATGGCCTCATTTCAGGAGTATCTAAACTAAGTACTTCAGACTCAACTCCTTCGACAATCAGCTTTGGCCGGAGGCACACTCGAGGGTTAACATTTGTTCCTCGATCAGTTCAGCGAGAAAAAGTGTCAGACTCCTCAACAGCTGGAACGAAGAGATGAAAGTAGTGTATGTAGACCAAGTATGTCTGTCGTTTCTAGCATATCTGATTCCAACTTTTGCTGCATTACTGCATAGTTTTCATTGTTGGCCCTTCTCAAGGATATCTGGTTTTGCGGCATTTCAGAGTTGGATTTTTCTTTTTCTTTTCTTTTTTTTAATTTTCCATTTAATATTTGATCATTGACCTCATCGATGGTTGATTAATAGTCATTTTGTAGTTGGGATGTAACTTGAGATCATATGGGAAATGATAGGAAGATATTGAGTTTCAAGATGGCAGAACTCAAGATAACGATGTATCTAGATGGATTAGGGAGGATTAGTTGCTTTGTTATGTACTTCCAATAGACTGAACAATGAAGAAAATATTGGTACTATAAATGTTGGCTCTTAAAAGAGCTTGTGGAGACATAATGAGGAAGGTGTTTAGCTTATCAATTCAATTGAGATATAGAATACCAAGAAATAGAACTTCATTAAGTTG

Coding sequence (CDS)

ATGGAAGTTGAATCACAATCAGAGTTCCCGTACTGGAAGCCTTTCCAACGGAGGTTCGATCCCGATTCTCCGTTCTTTGCCTCTGGAAATGTCGAGCGGGAAATCTTAGCCAAACAGGTTGCCTTGGATTTAACCGAAGATGAAAAGCTACAGCTGCATAATATGGCAGTTGATGCTAGCAGTGAAATCTTTTGCCCAATTGTTGGTTGCGGTGCACACTTGAAATCTCTGGATGACTTTGAAGATCATTACAATTCACGGCATACTGCCTCTTGTTCAGTTTGCCCTAGAGTTTACCCGACATCACGCTTACTTAGTTTACATGTGTCTGAGGCGCATGACGCGTTCTTTCAAGCAAAAGTTGCGCGTGGCTATGACATGTATGAATGCCTGGTGGAAGGTTGTGGTTTGAAGTTCAAAAGCTACAAAAGCAGACAGCAGCATCTAGTGGATAAGCATAAATTTTCTGCTTCATTTGAATTCTTTAAGAAAGCTCATCCATCTAAGAAACAAAGACAGAAATTACATCGTAAACAAGCCGTTCAAGGAAGGGAAGAAACCTCCGAAATGGAAGTTGAGAAGGAAACTATAGATGGCCTCATTTCAGGAGTATCTAAACTAAGTACTTCAGACTCAACTCCTTCGACAATCAGCTTTGGCCGGAGGCACACTCGAGGGTTAACATTTGTTCCTCGATCAGTTCAGCGAGAAAAAGTGTCAGACTCCTCAACAGCTGGAACGAAGAGATGA

Protein sequence

MEVESQSEFPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDASSEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDAFFQAKVARGYDMYECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQAVQGREETSEMEVEKETIDGLISGVSKLSTSDSTPSTISFGRRHTRGLTFVPRSVQREKVSDSSTAGTKR

Homology

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BLAST of Lsi03G003980 vs. Swiss-Prot
Match: ZN511_DANRE (Zinc finger protein 511 OS=Danio rerio GN=znf511 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-24
Identity = 76/237 (32.07%), Postives = 119/237 (50.21%), Query Frame = 1


Query: 2   EVESQSEFPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDASS 61
           E ++ S F + +P + RF  +  +F  G++ R +  + +     +D++           S
Sbjct: 43  EEKAVSPFEF-RPQRLRFAVEDEYFEDGDINRHMYLQNIVTSFVDDKQ-------PPTIS 102

Query: 62  EIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDAFFQAKV 121
           E  C I GC     +L+ +E HYN+ H   CS C R +P++RLL +H+ E HD+ FQ  +
Sbjct: 103 EFRCHIAGCKQLFDTLEGYEHHYNALHRNVCSNCKRSFPSNRLLEIHILEWHDSLFQI-M 162

Query: 122 ARGYDMYECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQ-- 181
           A    MYECLVEGCGLKFK+ K R+ HL+  H + A F F K     +   +K  +K+  
Sbjct: 163 AEKQCMYECLVEGCGLKFKTSKERKDHLIRTHSYPADFRFDKSKKIGRTTEKKTQQKKDA 222

Query: 182 -----AVQGREETSE-----MEVEKETIDGLISGVSKLSTSDSTPSTISFGRRHTRG 227
                A   ++E+SE     +  E    + + +   K   S   PS+I FG+   RG
Sbjct: 223 HMEVSATVLQQESSESMDFSLTPEPVETEPMQAANLKPRYSYKVPSSICFGQGSVRG 270

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BLAST of Lsi03G003980 vs. Swiss-Prot
Match: ZN511_MOUSE (Zinc finger protein 511 OS=Mus musculus GN=Znf511 PE=2 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 3.2e-21
Identity = 53/157 (33.76%), Postives = 85/157 (54.14%), Query Frame = 1


Query: 8   EFPY-WKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDASSEIFCP 67
           E P+ + P   RF  D  FF  G+V+R +  + +   ++E  +  +         E  C 
Sbjct: 31  EAPFRFAPRAVRFPRDHEFFEDGDVQRHLYLQDMLTQVSETPEKSM-------VPEFTCQ 90

Query: 68  IVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDAFFQAKVARGYD 127
           + GC     +++D++ HY+  H  +CS C R +P+  LL +H+ E HD+ FQ  +A+  D
Sbjct: 91  VAGCCQVFAAIEDYQHHYHMMHGNTCSFCNRAFPSGHLLDVHILEWHDSLFQI-LAQRQD 150

Query: 128 MYECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFK 164
           MY+CLVE C  KFK+ + R+ H+V  H + A F F K
Sbjct: 151 MYQCLVESCPEKFKTSQDRKDHMVRLHLYPADFRFDK 179

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BLAST of Lsi03G003980 vs. Swiss-Prot
Match: ZN511_HUMAN (Zinc finger protein 511 OS=Homo sapiens GN=ZNF511 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.6e-20
Identity = 62/182 (34.07%), Postives = 92/182 (50.55%), Query Frame = 1


Query: 18  RFDPDSPFFASGNVEREILAKQVALDLTE-DEKLQLHNMAVDASSEIFCPIVGCGAHLKS 77
           RF  +  FF  G+V+R +  + V + + +  EK ++   A        C + GC     +
Sbjct: 42  RFPREHQFFEDGDVQRHLYLQDVIMQVADVPEKPRVPAFA--------CQVAGCCQVFDA 101

Query: 78  LDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDAFFQAKVARGYDMYECLVEGCG 137
           LDD+E HY++ H   CS C R +P+  LL  H+ E HD+ FQ  ++   DMY+CLVEGC 
Sbjct: 102 LDDYEHHYHTLHGNVCSFCKRAFPSGHLLDAHILEWHDSLFQI-LSERQDMYQCLVEGCT 161

Query: 138 LKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQAVQG-REETSEMEVEKE 197
            KFK+ + R+ H+V  H + A F F K   P K +           G R E   ME+  E
Sbjct: 162 EKFKTSRDRKDHMVRMHLYPADFRFDK---PKKSRSPASAEAPGDSGERSEGEAMEICSE 211

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BLAST of Lsi03G003980 vs. Swiss-Prot
Match: L2K1_DROME (Protein lethal(2)k10201 OS=Drosophila melanogaster GN=l(2)k10201 PE=4 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 1.0e-11
Identity = 48/163 (29.45%), Postives = 77/163 (47.24%), Query Frame = 1


Query: 82  DHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDAFFQAKVARG-YDMYECLVEGCGLKFK 141
           D+ +   + SC  C ++ PT+ LL LH++E HD +F A V RG   M+ C +E C +KF 
Sbjct: 66  DNIDKEQSYSCVECRKMLPTAHLLDLHITEQHDCYFAASVERGDKPMFSCFLEECTIKFH 125

Query: 142 SYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQAVQGREETSEMEVEKETIDGL 201
           + + R+ H +  HK  A++ F            K   KQ  QG+ + + MEV+ E I+  
Sbjct: 126 TARQRKDHCIITHKLPANYRF---------DHSKNRGKQKHQGKSKPNSMEVD-EVIEET 185

Query: 202 --ISGVSKLSTSDSTPSTISFGRRHTRGLTFVPRSVQREKVSD 242
             +  V   S    T  +   G+    G T       +E ++D
Sbjct: 186 KSLPYVKAFSFGHQTQRSFYTGKDQRSGKTLDDVQAMKEAIND 218

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BLAST of Lsi03G003980 vs. TrEMBL
Match: A0A0A0LMY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G406660 PE=4 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 2.5e-129
Identity = 235/249 (94.38%), Postives = 241/249 (96.79%), Query Frame = 1


Query: 1   MEVESQSEFPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDAS 60
           MEVESQSEFP WKP QRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDA 
Sbjct: 1   MEVESQSEFPCWKPLQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDAR 60

Query: 61  SEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDAFFQAK 120
           SEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHD+FFQAK
Sbjct: 61  SEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDSFFQAK 120

Query: 121 VARGYDMYECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQA 180
           VARGYDMYECLVEGCGLKFKSYKSR QHLVDKHKFSASFEFFKKAHPSKKQRQK +RKQA
Sbjct: 121 VARGYDMYECLVEGCGLKFKSYKSRHQHLVDKHKFSASFEFFKKAHPSKKQRQKTYRKQA 180

Query: 181 VQGREETSEMEVEKETIDGLISGVSKLSTSDSTPSTISFGRRHTRGLTFVPRSVQREKVS 240
            QGREETS+MEVE E +DGLISGVSKLSTSDSTPS+ISFGRRHTRGLTFVPR+VQREKVS
Sbjct: 181 SQGREETSKMEVENEIMDGLISGVSKLSTSDSTPSSISFGRRHTRGLTFVPRAVQREKVS 240

Query: 241 DSSTAGTKR 250
           DSSTAGTKR
Sbjct: 241 DSSTAGTKR 249

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BLAST of Lsi03G003980 vs. TrEMBL
Match: V4W2X6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016370mg PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 8.8e-103
Identity = 186/249 (74.70%), Postives = 214/249 (85.94%), Query Frame = 1


Query: 1   MEVESQSEFPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDAS 60
           ++   +SEFP+W   +RRF PDSPFFASGN+ERE+LAKQVALD +EDEK QL NM  +  
Sbjct: 5   LDANFESEFPHWASVRRRFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDG 64

Query: 61  SEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDAFFQAK 120
             + CPIVGC A L+SL++FEDHYN+RHTASCSVC RVYPTSRLLS+HVSEAHD+FFQAK
Sbjct: 65  RRVCCPIVGCNARLRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAK 124

Query: 121 VARGYDMYECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQA 180
           VARGY MYECLVEGCGLKFK+YKSRQQHLVDKHKF  SFEFFKKAHPSKKQRQK  RKQA
Sbjct: 125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQKNQRKQA 184

Query: 181 VQGREETSEMEVEKETIDGLISGVSKLSTSDSTPSTISFGRRHTRGLTFVPRSVQREKVS 240
           +Q +E +S MEVE ETI+GL+S VSKLSTSDSTPS++SFGRRHTRGLT VPR+VQRE+  
Sbjct: 185 LQKKEASSSMEVEDETINGLVSAVSKLSTSDSTPSSVSFGRRHTRGLTLVPRAVQRERKP 244

Query: 241 DSSTAGTKR 250
           DS++  TKR
Sbjct: 245 DSTSMQTKR 253

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BLAST of Lsi03G003980 vs. TrEMBL
Match: A0A061ECW8_THECC (Zinc ion binding,nucleic acid binding,zinc ion binding OS=Theobroma cacao GN=TCM_017228 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 2.2e-101
Identity = 187/251 (74.50%), Postives = 213/251 (84.86%), Query Frame = 1


Query: 1   MEVESQSEFPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDAS 60
           ++ +    FPYW   +RRFDPDSPFF+SGN+ERE+LAKQVALDLTEDE+ QL  M    +
Sbjct: 5   VDYQHDLSFPYWTSTRRRFDPDSPFFSSGNIERELLAKQVALDLTEDERNQLEKMVAKDA 64

Query: 61  SEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDAFFQAK 120
             +FCPIVGCGA L SL+DFEDHYN+RHTASCSVC RVYPTS LLS+HVSEAHD+FFQAK
Sbjct: 65  RGVFCPIVGCGARLISLEDFEDHYNARHTASCSVCSRVYPTSHLLSIHVSEAHDSFFQAK 124

Query: 121 VARGYDMYECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQA 180
           VARGY +YECLVEGCGLKFKSYK RQQHLVDKHKF  SFEFFKKA PSKKQRQK HRKQA
Sbjct: 125 VARGYAVYECLVEGCGLKFKSYKGRQQHLVDKHKFPTSFEFFKKALPSKKQRQKNHRKQA 184

Query: 181 VQGREE--TSEMEVEKETIDGLISGVSKLSTSDSTPSTISFGRRHTRGLTFVPRSVQREK 240
           +  ++E  +S+MEVE ET+DGL+S VSKLSTSDS+PST+SFGR HTRGLTFVPRSVQ+EK
Sbjct: 185 MHKKDEEASSKMEVENETMDGLVSAVSKLSTSDSSPSTVSFGRHHTRGLTFVPRSVQQEK 244

Query: 241 VSDSSTAGTKR 250
            +DS  AG KR
Sbjct: 245 RADSRLAGAKR 255

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BLAST of Lsi03G003980 vs. TrEMBL
Match: A0A067FCN0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025436mg PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 2.8e-101
Identity = 183/248 (73.79%), Postives = 211/248 (85.08%), Query Frame = 1


Query: 1   MEVESQSEFPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDAS 60
           ++   +SEFP+W   +R F PDSPFFASGN+ERE+LAKQVALD +EDEK QL NM  +  
Sbjct: 5   LDANFESEFPHWASVRRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDG 64

Query: 61  SEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDAFFQAK 120
             + CPIVGC A ++SL++FEDHYN+RHTASCSVC RVYPTSRLLS+HVSEAHD+FFQAK
Sbjct: 65  RRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAK 124

Query: 121 VARGYDMYECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQA 180
           VARGY MYECLVEGCGLKFK+YKSRQQHLVDKHKF  SFEFFKKAHPSKKQRQK  RKQA
Sbjct: 125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQKNQRKQA 184

Query: 181 VQGREETSEMEVEKETIDGLISGVSKLSTSDSTPSTISFGRRHTRGLTFVPRSVQREKVS 240
           +Q +E +S MEVE ETIDGL+S VSKLSTSDSTPS++SFGRRHTRGLTFVPR+V  E+  
Sbjct: 185 LQKKEASSSMEVEDETIDGLVSAVSKLSTSDSTPSSVSFGRRHTRGLTFVPRAVHHERKP 244

Query: 241 DSSTAGTK 249
           DS++  TK
Sbjct: 245 DSTSMQTK 252

[Close]

BLAST of Lsi03G003980 vs. TrEMBL
Match: A0A067LCT1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10111 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 4.1e-100
Identity = 184/242 (76.03%), Postives = 212/242 (87.60%), Query Frame = 1


Query: 9   FPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDASSEIFCPIV 68
           FPYW P +RRFDPDSPFF  GN+ERE++AKQ+ALDLTEDEK +L N+  D   E+FCPIV
Sbjct: 15  FPYWTPVRRRFDPDSPFFDYGNIERELIAKQIALDLTEDEKHRLQNLVDDDDREVFCPIV 74

Query: 69  GCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDAFFQAKVARGYDMY 128
           GCGA L SL+DFEDHYN+RHTASCSVC RVYPTSRLL++HVSEAHD+FFQAKVARGY MY
Sbjct: 75  GCGARLTSLEDFEDHYNARHTASCSVCSRVYPTSRLLNIHVSEAHDSFFQAKVARGYAMY 134

Query: 129 ECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQAVQGREET- 188
           ECLVEGCGLKFK+YKSRQQHLVDKHKF ++FEFFKK HPSKK RQK  RKQAVQ REET 
Sbjct: 135 ECLVEGCGLKFKNYKSRQQHLVDKHKFPSTFEFFKKTHPSKKARQKHQRKQAVQKREETS 194

Query: 189 SEMEVEKETIDGLISGVSKLSTSDSTPSTISFGRRHTRGLTFVPRSVQREKVSDSSTAGT 248
           S+MEVE ETIDGL+S VS+L+TSDSTPS+ISFGRR+T GLTFVPR++++E    S+ +GT
Sbjct: 195 SKMEVEGETIDGLVSAVSRLTTSDSTPSSISFGRRNTHGLTFVPRAIRQE---SSAQSGT 253

Query: 249 KR 250
           KR
Sbjct: 255 KR 253

[Close]

BLAST of Lsi03G003980 vs. TAIR10
Match: AT5G14140.1 (AT5G14140.1 zinc ion binding;nucleic acid binding;zinc ion binding)

HSP 1 Score: 330.5 bits (846), Expect = 9.0e-91
Identity = 168/255 (65.88%), Postives = 199/255 (78.04%), Query Frame = 1


Query: 1   MEVESQSE--FPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVD 60
           M V++  E  FPYW P +RRF PDSPFFASGNVERE+LAKQV LD TEDE   LH     
Sbjct: 5   MAVDTVGELGFPYWNPIRRRFPPDSPFFASGNVERELLAKQVTLDFTEDEINHLHKFVEI 64

Query: 61  ASSEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDAFFQ 120
            +  I CPIVGC   LKSLD FEDHYN+RHTASCSVC RVYPTSRLLS+H+SEAHD+FFQ
Sbjct: 65  ETRRISCPIVGCPERLKSLDHFEDHYNARHTASCSVCSRVYPTSRLLSIHISEAHDSFFQ 124

Query: 121 AKVARGYDMYECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRK 180
           AKV+RGYDMYECLVEGCGLKFK+YK+R +HL+DKHKF  +FEFFKK   SKK+R+KL R+
Sbjct: 125 AKVSRGYDMYECLVEGCGLKFKTYKARHRHLIDKHKFPTTFEFFKKTQLSKKRREKLQRQ 184

Query: 181 QAVQGREE-------TSEMEVE-KETIDGLISGVSKLSTSDSTPSTISFGRRHTRGLTFV 240
              + + E       +  MEVE K ++DGL+S +S L+TSD+TPS +SFGRRH RGLTFV
Sbjct: 185 HVSKLKHEEDKEAASSDAMEVEDKGSLDGLVSALSSLTTSDTTPSNVSFGRRHGRGLTFV 244

Query: 241 PRSVQREKVSDSSTA 246
           PRSV REK ++SS+A
Sbjct: 245 PRSVHREKRTESSSA 259

[Close]

BLAST of Lsi03G003980 vs. NCBI nr
Match: gi|659081443|ref|XP_008441334.1| (PREDICTED: zinc finger protein 511 [Cucumis melo])

HSP 1 Score: 474.6 bits (1220), Expect = 1.1e-130
Identity = 236/249 (94.78%), Postives = 243/249 (97.59%), Query Frame = 1


Query: 1   MEVESQSEFPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDAS 60
           MEVESQSEFP WKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDAS
Sbjct: 1   MEVESQSEFPCWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDAS 60

Query: 61  SEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDAFFQAK 120
           SEIFCPIVGCGAHLKSLDDFEDHYNSRH ASCSVCPRVYPTSRLLSLHVSEAHD+FFQAK
Sbjct: 61  SEIFCPIVGCGAHLKSLDDFEDHYNSRHAASCSVCPRVYPTSRLLSLHVSEAHDSFFQAK 120

Query: 121 VARGYDMYECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQA 180
           VARGYDMYECLVEGCGLKFKSYKSR QHLVDKHKFSASFEFFKKAHPSKKQRQK++RKQA
Sbjct: 121 VARGYDMYECLVEGCGLKFKSYKSRHQHLVDKHKFSASFEFFKKAHPSKKQRQKMYRKQA 180

Query: 181 VQGREETSEMEVEKETIDGLISGVSKLSTSDSTPSTISFGRRHTRGLTFVPRSVQREKVS 240
           +QGREETS MEVE E +DGLISGVSKLSTSDSTPS+ISFGRRHTRGLTFVPR+VQREKVS
Sbjct: 181 IQGREETSRMEVENEIMDGLISGVSKLSTSDSTPSSISFGRRHTRGLTFVPRAVQREKVS 240

Query: 241 DSSTAGTKR 250
           DSSTAGTKR
Sbjct: 241 DSSTAGTKR 249

[Close]

BLAST of Lsi03G003980 vs. NCBI nr
Match: gi|449442046|ref|XP_004138793.1| (PREDICTED: zinc finger protein 511 [Cucumis sativus])

HSP 1 Score: 469.5 bits (1207), Expect = 3.5e-129
Identity = 235/249 (94.38%), Postives = 241/249 (96.79%), Query Frame = 1


Query: 1   MEVESQSEFPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDAS 60
           MEVESQSEFP WKP QRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDA 
Sbjct: 1   MEVESQSEFPCWKPLQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDAR 60

Query: 61  SEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDAFFQAK 120
           SEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHD+FFQAK
Sbjct: 61  SEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDSFFQAK 120

Query: 121 VARGYDMYECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQA 180
           VARGYDMYECLVEGCGLKFKSYKSR QHLVDKHKFSASFEFFKKAHPSKKQRQK +RKQA
Sbjct: 121 VARGYDMYECLVEGCGLKFKSYKSRHQHLVDKHKFSASFEFFKKAHPSKKQRQKTYRKQA 180

Query: 181 VQGREETSEMEVEKETIDGLISGVSKLSTSDSTPSTISFGRRHTRGLTFVPRSVQREKVS 240
            QGREETS+MEVE E +DGLISGVSKLSTSDSTPS+ISFGRRHTRGLTFVPR+VQREKVS
Sbjct: 181 SQGREETSKMEVENEIMDGLISGVSKLSTSDSTPSSISFGRRHTRGLTFVPRAVQREKVS 240

Query: 241 DSSTAGTKR 250
           DSSTAGTKR
Sbjct: 241 DSSTAGTKR 249

[Close]

BLAST of Lsi03G003980 vs. NCBI nr
Match: gi|567909471|ref|XP_006447049.1| (hypothetical protein CICLE_v10016370mg [Citrus clementina])

HSP 1 Score: 381.3 bits (978), Expect = 1.3e-102
Identity = 186/249 (74.70%), Postives = 214/249 (85.94%), Query Frame = 1


Query: 1   MEVESQSEFPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDAS 60
           ++   +SEFP+W   +RRF PDSPFFASGN+ERE+LAKQVALD +EDEK QL NM  +  
Sbjct: 5   LDANFESEFPHWASVRRRFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDG 64

Query: 61  SEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDAFFQAK 120
             + CPIVGC A L+SL++FEDHYN+RHTASCSVC RVYPTSRLLS+HVSEAHD+FFQAK
Sbjct: 65  RRVCCPIVGCNARLRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAK 124

Query: 121 VARGYDMYECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQA 180
           VARGY MYECLVEGCGLKFK+YKSRQQHLVDKHKF  SFEFFKKAHPSKKQRQK  RKQA
Sbjct: 125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQKNQRKQA 184

Query: 181 VQGREETSEMEVEKETIDGLISGVSKLSTSDSTPSTISFGRRHTRGLTFVPRSVQREKVS 240
           +Q +E +S MEVE ETI+GL+S VSKLSTSDSTPS++SFGRRHTRGLT VPR+VQRE+  
Sbjct: 185 LQKKEASSSMEVEDETINGLVSAVSKLSTSDSTPSSVSFGRRHTRGLTLVPRAVQRERKP 244

Query: 241 DSSTAGTKR 250
           DS++  TKR
Sbjct: 245 DSTSMQTKR 253

[Close]

BLAST of Lsi03G003980 vs. NCBI nr
Match: gi|1009151955|ref|XP_015893832.1| (PREDICTED: zinc finger protein 511 [Ziziphus jujuba])

HSP 1 Score: 378.6 bits (971), Expect = 8.2e-102
Identity = 187/241 (77.59%), Postives = 210/241 (87.14%), Query Frame = 1


Query: 9   FPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDASSEIFCPIV 68
           FPYWKP QRRFDP+SPFFASGN+ERE+LAKQVALDL+EDEK  L N   + S  +FCPIV
Sbjct: 12  FPYWKPIQRRFDPESPFFASGNIERELLAKQVALDLSEDEKHYLRNSLGEDSRGVFCPIV 71

Query: 69  GCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDAFFQAKVARGYDMY 128
           GCGA L SL+DFEDHYN+RHTASCSVC RVYPTS LLS+HVSEAHD+FFQAKVARGY MY
Sbjct: 72  GCGACLTSLEDFEDHYNARHTASCSVCSRVYPTSHLLSIHVSEAHDSFFQAKVARGYAMY 131

Query: 129 ECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQAVQGREETS 188
           ECLVEGCGLKFK+YK RQQHLVDKHKF  SFEF KK HPSKKQRQK +R+QAV  + + S
Sbjct: 132 ECLVEGCGLKFKNYKGRQQHLVDKHKFPTSFEFLKKTHPSKKQRQKNYRRQAVHKKADAS 191

Query: 189 EMEVEKETIDGLISGVSKLSTSDSTPSTISFGRRHTRGLTFVPRSVQREKVSDSSTAGTK 248
            MEVE ETIDGL+S VSKLSTSDS PS+ISFGRRHTRGLT+VPR+VQREK  D+++AGT+
Sbjct: 192 SMEVENETIDGLVSAVSKLSTSDS-PSSISFGRRHTRGLTYVPRAVQREKKPDTTSAGTR 251

Query: 249 R 250
           R
Sbjct: 252 R 251

[Close]

BLAST of Lsi03G003980 vs. NCBI nr
Match: gi|590647428|ref|XP_007031899.1| (Zinc ion binding,nucleic acid binding,zinc ion binding [Theobroma cacao])

HSP 1 Score: 376.7 bits (966), Expect = 3.1e-101
Identity = 187/251 (74.50%), Postives = 213/251 (84.86%), Query Frame = 1


Query: 1   MEVESQSEFPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDAS 60
           ++ +    FPYW   +RRFDPDSPFF+SGN+ERE+LAKQVALDLTEDE+ QL  M    +
Sbjct: 5   VDYQHDLSFPYWTSTRRRFDPDSPFFSSGNIERELLAKQVALDLTEDERNQLEKMVAKDA 64

Query: 61  SEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDAFFQAK 120
             +FCPIVGCGA L SL+DFEDHYN+RHTASCSVC RVYPTS LLS+HVSEAHD+FFQAK
Sbjct: 65  RGVFCPIVGCGARLISLEDFEDHYNARHTASCSVCSRVYPTSHLLSIHVSEAHDSFFQAK 124

Query: 121 VARGYDMYECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQA 180
           VARGY +YECLVEGCGLKFKSYK RQQHLVDKHKF  SFEFFKKA PSKKQRQK HRKQA
Sbjct: 125 VARGYAVYECLVEGCGLKFKSYKGRQQHLVDKHKFPTSFEFFKKALPSKKQRQKNHRKQA 184

Query: 181 VQGREE--TSEMEVEKETIDGLISGVSKLSTSDSTPSTISFGRRHTRGLTFVPRSVQREK 240
           +  ++E  +S+MEVE ET+DGL+S VSKLSTSDS+PST+SFGR HTRGLTFVPRSVQ+EK
Sbjct: 185 MHKKDEEASSKMEVENETMDGLVSAVSKLSTSDSSPSTVSFGRHHTRGLTFVPRSVQQEK 244

Query: 241 VSDSSTAGTKR 250
            +DS  AG KR
Sbjct: 245 RADSRLAGAKR 255

The following BLAST results are available for this feature:

BLAST of Lsi03G003980 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ZN511_DANRE	1.1e-24	32.07	Zinc finger protein 511 OS=Danio rerio GN=znf511 PE=2 SV=1	[more]
ZN511_MOUSE	3.2e-21	33.76	Zinc finger protein 511 OS=Mus musculus GN=Znf511 PE=2 SV=2	[more]
ZN511_HUMAN	1.6e-20	34.07	Zinc finger protein 511 OS=Homo sapiens GN=ZNF511 PE=1 SV=1	[more]
L2K1_DROME	1.0e-11	29.45	Protein lethal(2)k10201 OS=Drosophila melanogaster GN=l(2)k10201 PE=4 SV=2	[more]

BLAST of Lsi03G003980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMY3_CUCSA	2.5e-129	94.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G406660 PE=4 SV=1	[more]
V4W2X6_9ROSI	8.8e-103	74.70	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016370mg PE=4 SV=1	[more]
A0A061ECW8_THECC	2.2e-101	74.50	Zinc ion binding,nucleic acid binding,zinc ion binding OS=Theobroma cacao GN=TCM...	[more]
A0A067FCN0_CITSI	2.8e-101	73.79	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025436mg PE=4 SV=1	[more]
A0A067LCT1_JATCU	4.1e-100	76.03	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10111 PE=4 SV=1	[more]

BLAST of Lsi03G003980 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G14140.1	9.0e-91	65.88	zinc ion binding;nucleic acid binding;zinc ion binding	[more]

BLAST of Lsi03G003980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081443\|ref\|XP_008441334.1\|	1.1e-130	94.78	PREDICTED: zinc finger protein 511 [Cucumis melo]	[more]
gi\|449442046\|ref\|XP_004138793.1\|	3.5e-129	94.38	PREDICTED: zinc finger protein 511 [Cucumis sativus]	[more]
gi\|567909471\|ref\|XP_006447049.1\|	1.3e-102	74.70	hypothetical protein CICLE_v10016370mg [Citrus clementina]	[more]
gi\|1009151955\|ref\|XP_015893832.1\|	8.2e-102	77.59	PREDICTED: zinc finger protein 511 [Ziziphus jujuba]	[more]
gi\|590647428\|ref\|XP_007031899.1\|	3.1e-101	74.50	Zinc ion binding,nucleic acid binding,zinc ion binding [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR015880	Zinc finger, C2H2-like
IPR007087	Zinc finger, C2H2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G003980.1	Lsi03G003980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 65..88 score: -coord: 92..113 score: -coord: 130..153 scor
IPR015880	Zinc finger, C2H2-like	SMART	SM00355	c2h2final6	coord: 63..88 score: 0.37coord: 90..113 score: 5.3coord: 128..153 score: 0
None	No IPR available	PANTHER	PTHR21354	UNCHARACTERIZED	coord: 9..248 score: 5.1
None	No IPR available	PANTHER	PTHR21354:SF0	ZINC FINGER PROTEIN 511	coord: 9..248 score: 5.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi03G003980	Csa2G406660	Cucumber (Chinese Long) v2	culsiB115
Lsi03G003980	CSPI02G25610	Wild cucumber (PI 183967)	cpilsiB113
Lsi03G003980	Cucsa.087750	Cucumber (Gy14) v1	cgylsiB098
Lsi03G003980	Cla006505	Watermelon (97103) v1	lsiwmB277
Lsi03G003980	MELO3C008189	Melon (DHL92) v3.5.1	lsimeB259
Lsi03G003980	ClCG11G007130	Watermelon (Charleston Gray)	lsiwcgB226
Lsi03G003980	MELO3C008189.2	Melon (DHL92) v3.6.1	lsimedB272
Lsi03G003980	Bhi04G001987	Wax gourd	lsiwgoB322
Lsi03G003980	Cp4.1LG01g25710	Cucurbita pepo (Zucchini)	cpelsiB339
Lsi03G003980	CsGy2G025240	Cucumber (Gy14) v2	cgyblsiB102
Lsi03G003980	Carg06049	Silver-seed gourd	carlsiB017
Lsi03G003980	CsaV3_2G034120	Cucumber (Chinese Long) v3	cuclsiB127

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G003980	Cucurbita maxima (Rimu)	cmalsiB276
Lsi03G003980	Cucurbita maxima (Rimu)	cmalsiB656
Lsi03G003980	Cucurbita moschata (Rifu)	cmolsiB265
Lsi03G003980	Cucurbita moschata (Rifu)	cmolsiB645
Lsi03G003980	Cucurbita pepo (Zucchini)	cpelsiB143
Lsi03G003980	Silver-seed gourd	carlsiB924