Lsi03G002350 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G002350
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Regulator of chromosome condensation (RCC1) family protein
Location	chr03 : 2939649 .. 2946665 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCCGTACGATATTCGCATTTCTCCTCTCTTTTTGCTTGTGTTTCACTTTCACTCACCTTTTTGCTTTTTCAATTTCATCTTTATCTCTTTCTCAAAAGATTTTCATCTTTATTTTATTCGCATTTCTTAATTAGAAGCAGATTCTACTCGGATTTGTTTAGCTCAAATTCCTGATTTAGGACGCCAGACACTGCTCGAGCTTTGTATCTCGCTTTTCAATGGCTGCCGATACTGCTATTATTGCTTGGTCCGTAATCATGGTTGTCTCTAATTTTGTGCTGTAGTTGTCAAAGATTGATAGCAACTGAATTGATTGACCAAAATGTAAACGAATTGTCAGGGGTTCAGGAGAAGATGGGCAATTGGGATTGGGGAATAACGAAGAAAGTGAATGGGTTTGCGCCATTAAAGCTCTTGAGTCTCAGAATGTCTGTTCTGTTGTTGCTGGTAGCCGGAACTCCCTCGCCATATGCGAAGATGGGAAAGTCAGTTACATTTTATTCGAATCGCTCTCTTTAAGCTTCTGTTTTAATTCACTTCTGTTCGTTTTGTCTTCTCGTATTTCTTTGTTTTGGTTTTAAATTTGTGGGGAATTTGTAGCTGTTTACATGGGGTTGGAATCAGAGAGGAACTCTTGGGCACCCAGCAGGAACCAAAGCTGAGAATGTTCCGAGCCAGGTGAAAGCTCTTGGTAATGTTAAGATTGTACAGGTAATCAATCTAAGTGTAGTTTTTAATTTTAGTGCTGAAGAACTTCTGTGTACTATTTGGTTAGTGTTTTAGAGAGAGTTTCATATGGTGGTCCTGTTTTTTAGGCGGCGATTGGTGGATGGCACTGTCTTGCTGTGGATGATCAAGGCCGAGCTTATGCCTGGGGTACTTAAAATTCCTTTCCTTGGCTAACTGTGTGACTGGGAATACTGACCATGAAATTTTTACAGTACTAGTTATCAATGTTTTAAAAATGTCAAAGAGGCATATAAACCTTTTATCTTGAAGAGGCAAGACTTAAACTTATTTGGGAGCATTTATAGAAGTGCTAAAACGACAAAGTCACGTATCAATCAATTGTTATCACCTTAAATAAACATTGCTATAGTTGTTTTCAATATTGTCATCACAGTCACTGATTGAGGATTCACAAAATCCTTTAACTATTTTCTTTAATACTTTTTTGAAAGCTTTAGCAGTAAAATAATAATGGGCTAAAGTACCAATGTCAATTTTGTATTGGTATGACATATACTGGTGAACTTTATTTCATAGAAAAATAGATGGGAGTTGATATTATCATTCTATTTCTCAAATGTGTTTTCTCATTAAAACTACCAGATCGGTACTTAAACAATGCTTCACCAAATATTATCATTCTATTTCTAAGGGTTACAATTTACACAAAGACTACAACTTAGCATGTAATCATAGATCGTGAACTTTTTATGTATGGAGGGGATAAATCTCTTGTGAATCTTAGAAGACAAATATTAAGGGTTAAAAACTCGTGGCTGCCTCAGAGTGCAAGTTTCAGAATCTTTTTGAAAGAATGTTAGTCTTGTATTTACAATCATTTACCATCTGGGAGAGATAACAAATTTTACGTCTTTGGATTAAGTTTTAACGTTGTCTGTATTCTGTACTAGCTTCATTTGTGCATGACAGTATGAGTAACAACAGAGCAGAAGTCGTTATACTTAGTTAGAGGGTTATTTGGAACTGGAACTTGTTTGGGGAAAGTTTTCCTGGCGCCTCATATTTTAGATCAAGCTAGGCAAGTAAGCATGTAAAGTTTGTATGGTGCAGGTGGTAATGAATATGGTCAGTGTGGTGAAGAACCTGAGAAGAAAGATGACACTGGGAGGCCACCGAGAAGAGATATAGCAATTCCTCAACGATGTGCTCCAAAACTAATAGTTCAACAGGTAACATATTTGTGAGCATTTATTTTGGATCATGTTCATGTATTATGCAGATACTCATAGATGCTATGCACAATACAGCTTTTACTTACTGTGTTCACATGATCACAATATTGTAGCCCTTTCATTTAAGCACGTCTGCTTGAATTCCTGGAAATGAACCATTTGGTGCATTACCAGGAAAACATATTTTTTCCTATGTTCGATAATTTATCTAATCAAATAATTCTTAAGAGTGATAGCTATTTTCAATATGATCTTTATAGTCTTATCTCTAATGAACATGGCAAAATGCCACTTAAAGATATCTACATATACCAAACCGAGCAATTGTGATAATGATATTGAAACTGGAGAGCAAGTCCTGGTATGGGCCAGACTAATTCATGGTTGTCCTTCTCCAGAAAACTATCATAAACTTTCATGGTTATCTTATCTTGTAAAGAACATTGCCGTTAACTGGAACATGATGACATTTCTCTCGTAGATCTCTGCTTTCTAATTGGTCAACTTCGTAGTCAGTGTTCTCCTCTTTCTTGATTGTCAAAGATATTGTGGAGAATGAAAAATATCCCCGTCCCCCCAAATAAGAAAGCAGTATTTATTTGGTTCTTGGTACTGGGATGAAAATGAATTAATACCAAAGATACTAATTCGACAAGAAATCTCCATCAACAGCTTTCCCTTAACTGGTGTTATATGTCCAAAAAAATGTAAGGAAGATGCCAACCAGCTCTTTTTCATCCTTCCATGGCTATAGGTTTACGGAATAAGGTATTGTTGGCTTTCAAAGTCCAGTTGATGCTTGCCTAATTAATACCAAAAATTTCATTATTGAGTCTGTGGGGCTTGTTTCCTCGTTAAAGTCTAAGCTAAAACTTTGTGAAATAAAAATGCTATGGTGAGATTCGTGGTTTGTCTAAGGTAGCTTCTCCTGAATCTAATGGATACATAGCTAGACATTTGTGTTTTTGTTCAGTGGACAAATAAGTTCACTTTTGCATCAAATTGTGGAGCGGGATTATATGTCTCCAGATTTGATAGATTGGACGAGCAGACCAAGCTTGACTGCCTGAGCAATTTTCCTGACATTATGACTGGTGACCACGATTGATGAAGGGAAATAAAATGTTCTCAAAATTTTTAATAACCATGTCTGAGAGTAGCTTATAAATTCTTTGACTAACCTCATGACAAAAATGCTCAGTTTTACAACATTTAGTCCCAAAGAACTTCCAGATTACTTAACATCCTAATGATATGGCTAATGTGGTTTTAAGTCAATGACTTCAATGTCATTTGAATTTGAAGCTTGCTAGTGAGATGACAAGGCTTCCAAGGTCCAGATTATTCTTGATCTTATTACATTTGGCACAGTTTGTTCTTGAAATTACATGCAAGTAGGTAGACACAAATCAAAGATCCGGTTTGATTTTGACTTGACCCTTTTTAATCTCTGGGCTCTGTCTTGAATGCATATTTTATGGAAGATTGTTTTATGCTCATCTCAAGTTGGTTGAGAAACGTACTCCTTTTTCTCTGTCATAGGTTGCTGCAGGAGGTACACACTCTGTGGTACTTACACGTGAAGGACATGTATGGACGTGGGGCCAACCATGGCCACCTGGAGATATGTATGGTCTCATAACTTTTAATTATAATATCACTGAACACTTCTATTCTGTTTACTTATTTTGAACTATAATGGACATTTTTGCACTGGCATAGTCATCCATATAGATATGTTCGTTAATTAGGTTTGCTTATTTTAAACTACAATGACCATCTTTCCACTGTCGTGGACGTTTTTTTTTCTTTTTCACAACCAGTCTTGTCAGTGTCACTATCGTTATTCTAACATATTTAACTAGAATTGTTTCTAGTACTTGGTCTGTTTTCATTGTATGCAGTGATGCTAATATATTGAGAGTGTATTGTTTGCAGAAAGCAAATTTCTGGTTCATTGTATGCAGTGATGCTAATATATTGAGAGTGTATTGTTTGCAGAAAGCAAATTTCTGTTCCTGTACGAGTTCAAGGTCTCGATATGGTGAGGCTTATTGCAGTTGGGGCATTTCATAATTTAGCTCTCCAAGAAGATGGAACTTTATGGGCATGGGGTAATAATGAATATGGACAACTTGGAACTGGTGACACACAACCAAGATCACAGCCAATTCCTGTCCAAGGGCTTTCTGGTCTTAATTTGGTTTGTGTTCCATATTCTATTTTTTTTCTAAATTTTATTTTAAATAAAAAAAACTCAAAGACGTATTTTCTATGTTTAGCCATGAAAATAAAAGCAGCTTATATGGCTACCTTGTTAATTAATTTACCACATCTTTATCCAAAGGTTGACATTGCAGCTGGAGGATGGCATTCAACTGCATTGACAGATAGCGGAGAGGTGAGTGTTCACTCTCTCTCTCCACTTAATGCTGAGGGGTTCTCTATGCCAATATATATTGTAGTACACTGATATCAATACATGTTTTGAGAGAAGTCGATCTCCATAGAGGCTAGAGCTGTATAACTATTGGTGTTTGATAGTGCTAGTGCATTTGCAAAGAAATACCTTCTACAATTCCATGAAGCCATGAAACTTCTATCATTTTGGCCTGGCATTGATTCTAGTACAAACTACGAACATGAAACAATGTGTAGTGTGTCCTTGCGTTGGTTGTGTTTAAGTGCTTATATGTTAAACACTGATCTGCACGATAATCTGTCAAATCCATATTTTCTTGAGATTTGAGAAGACAAAAGTTTTATTTCATAGTTGAAGTAGCAGTGCTTATGTCTTCGATAAGCATGGTTTACATGCTTGGTAAAATTTGCTGATGAATTACGAACTCGGTCAAGATCGAATGATGCATCCTCCATTGTCTGTGTTTGAGTAGAAAGAGTAAGCTTACTGCTATTGCAGGTTTATGGATGGGGGCGAGGAGAACATGGGAGGCTTGGGTTTGGAGATAATGACAAGAGCAGCAAAATGGTTCCCCAGAAGGTTCAACTTCTGTCTGGAGAGGACATTGTTCAGGTACAAATCATGCCATTTTTATAATTGTGCCCCGCAACTTCTGCCTAAAGCTGAGAAATGTCTTAAAGGCTGGATGAATTTAGATTTTAGAAGGTCGTTGTAATGGAAGTATGGATATAATGTTCTATTGACATGATATTTAGTTTGATGCACGAATGGGAAAACAAACATTTCCCTTTGGTTTCATACATTCGACCTTCTATAAAATAATCCTTCATCGGTAAGCTGATATAATTCTAGTTTGAAAAGGATAAGAGTATCTTGGATAAACCTGTCGAACAAATAGTTCCTTAATAAATAAAAAGAGAGTATTCTATGTTTCAATTTTGGCTTGCACCCCTAGACAACAGAGTGATTACCAAAAGGAAATAACTATCGTTGGCGTTTTATTCTTGAAAAAAAGAAAATACACTTGAATTAAATTTCAGGATCCCTCTGAGAATTAAGGATTAGAGTTAGAGATGCAGTTTTTATTTGACAAAAGTAGAAATCTTTTGAATATGCAATAATCTCATTCATTGGTACAGGTATCATGTGGAGGCACACACTCAGTTGCAGTAACCAGTGACGGCCGCATGTTTTCGGTTAGTCTTAATCAACAACCTTGTTTGAGACATCATCATATGATGAAACCGGTTATGGATTTTTGTTTTTTTAATGTGTTTTTCCAAAATAATTTAAAAACTAATACATTTTTAAAAGTACTGATGGAGATGGTTGATTCAAAATCTTCTTTCTAATAGGCTATTTTAGGGATAAATCATTACATTACTTAAGTTTTGACGTTATCTTGATCCATCAGCTTTCAGCTTATTCTACTTTTGTCTCCTTTAACTCTCAAACATTCTAAACTTCGTACGATTTGTTTCGATCCTTGTTATGTTCTTATACATTAGTTAATTGAAACTTGTGACAGATATTTATTTGTCTAGACAAGTAAACCACATGTAGACATGTGGTGGGTTAAGTACTAGATTATGAAACAACTTTAGATGTTTTTGTAAAATGGTTAATGAGAGATTTAAAATAATTCTTTTTATGCATAGTTCATGGACTAAAGCAAAATAAATAAAATTTGAGCCCCCCCCCCCCAAAAAAAAAAAAGAAAAAAAAGAAAAAAAAAAAAGCTACATTACATAATGTACCCTTGAACTTTTCCATTTGTTTTAAAAAATACACTTATTCTTTCAAAAATTACAATATTACCCTTGACCTTTGATAAACGTTTCAAAACTACATTTGGAGTAGGAATCTGTTAGAATGTTGAGAAGAAATCAATTAGAATGTTGAGACTTGGAATAGTGTGGTGTTGGCGTGGAATGAGAGGTGGACCCTAAACACTGCCACACCCATTTCATGTCCCAATTTTCATCCAAAATTCTAATGAATTTCTACTCTAACGATCGTTTTGAGAAACTTTAATAGAAGTTAGGAGCAGCGTCCGCAATTTGGCCAAATAAAAAGTATGAAAAGTTGAAGGATCACAGTGGTGTTTCAAGTCACTATTATCCAAAATCATTGCCTTAGATACACTTTTACTCTAGATTTAGAACTATTTTGAAATCCACCTCTTCTCATTAAATTTGTTCTGAAAGCTCATTGTCAAGTCTTTGTTATATTTCCAAGTCTTTGTTATATTTCTTCTACCTTGTTTATATGTGTATGACAGTTTGGGCGAGGCGACCATGGGCGGCTTGGATATGGAAGGAAGGTAACAACTGGGCAACCAGAGGAAGTTCCGATTGACATTGCACCTCCTCGTGGGAGGACTGAGCATGGCCGTTGGATTGCCAAACTTGTTGCCTGCGGTGGCCGCCATACATTAGCTCTGGTACAATGGAAACCTGAGGATTAAGCTAAATAATTAATGGTTGTTAGATTCTTAAGATGATCATCTTCTTTCTTTCTATAATAATTATGGGACAAGACAATATCGATTTGCAGGTTTGGTCTTTGTCAAGTCTGGAAGAATGGGTTGTGCATTCTTGATTGTTCAATCTATTCTCTGTAGTAAACTTCCATGAATCAAATCTACGTAATAAAAAATCAGTTTAGTATCA

mRNA sequence

CGCCGTACGATATTCGCATTTCTCCTCTCTTTTTGCTTGTGTTTCACTTTCACTCACCTTTTTGCTTTTTCAATTTCATCTTTATCTCTTTCTCAAAAGATTTTCATCTTTATTTTATTCGCATTTCTTAATTAGAAGCAGATTCTACTCGGATTTGTTTAGCTCAAATTCCTGATTTAGGACGCCAGACACTGCTCGAGCTTTGTATCTCGCTTTTCAATGGCTGCCGATACTGCTATTATTGCTTGGGGTTCAGGAGAAGATGGGCAATTGGGATTGGGGAATAACGAAGAAAGTGAATGGGTTTGCGCCATTAAAGCTCTTGAGTCTCAGAATGTCTGTTCTGTTGTTGCTGGTAGCCGGAACTCCCTCGCCATATGCGAAGATGGGAAACTGTTTACATGGGGTTGGAATCAGAGAGGAACTCTTGGGCACCCAGCAGGAACCAAAGCTGAGAATGTTCCGAGCCAGGTGAAAGCTCTTGGTAATGTTAAGATTGTACAGGCGGCGATTGGTGGATGGCACTGTCTTGCTGTGGATGATCAAGGCCGAGCTTATGCCTGGGGTGGTAATGAATATGGTCAGTGTGGTGAAGAACCTGAGAAGAAAGATGACACTGGGAGGCCACCGAGAAGAGATATAGCAATTCCTCAACGATGTGCTCCAAAACTAATAGTTCAACAGGTTGCTGCAGGAGGTACACACTCTGTGGTACTTACACGTGAAGGACATGTATGGACGTGGGGCCAACCATGGCCACCTGGAGATATAAAGCAAATTTCTGTTCCTGTACGAGTTCAAGGTCTCGATATGGTGAGGCTTATTGCAGTTGGGGCATTTCATAATTTAGCTCTCCAAGAAGATGGAACTTTATGGGCATGGGGTAATAATGAATATGGACAACTTGGAACTGGTGACACACAACCAAGATCACAGCCAATTCCTGTCCAAGGGCTTTCTGGTCTTAATTTGGTTGACATTGCAGCTGGAGGATGGCATTCAACTGCATTGACAGATAGCGGAGAGGTTTATGGATGGGGGCGAGGAGAACATGGGAGGCTTGGGTTTGGAGATAATGACAAGAGCAGCAAAATGGTTCCCCAGAAGGTTCAACTTCTGTCTGGAGAGGACATTGTTCAGGTATCATGTGGAGGCACACACTCAGTTGCAGTAACCAGTGACGGCCGCATGTTTTCGTTTGGGCGAGGCGACCATGGGCGGCTTGGATATGGAAGGAAGGTAACAACTGGGCAACCAGAGGAAGTTCCGATTGACATTGCACCTCCTCGTGGGAGGACTGAGCATGGCCGTTGGATTGCCAAACTTGTTGCCTGCGGTGGCCGCCATACATTAGCTCTGGTACAATGGAAACCTGAGGATTAAGCTAAATAATTAATGGTTGTTAGATTCTTAAGATGATCATCTTCTTTCTTTCTATAATAATTATGGGACAAGACAATATCGATTTGCAGGTTTGGTCTTTGTCAAGTCTGGAAGAATGGGTTGTGCATTCTTGATTGTTCAATCTATTCTCTGTAGTAAACTTCCATGAATCAAATCTACGTAATAAAAAATCAGTTTAGTATCA

Coding sequence (CDS)

ATGGCTGCCGATACTGCTATTATTGCTTGGGGTTCAGGAGAAGATGGGCAATTGGGATTGGGGAATAACGAAGAAAGTGAATGGGTTTGCGCCATTAAAGCTCTTGAGTCTCAGAATGTCTGTTCTGTTGTTGCTGGTAGCCGGAACTCCCTCGCCATATGCGAAGATGGGAAACTGTTTACATGGGGTTGGAATCAGAGAGGAACTCTTGGGCACCCAGCAGGAACCAAAGCTGAGAATGTTCCGAGCCAGGTGAAAGCTCTTGGTAATGTTAAGATTGTACAGGCGGCGATTGGTGGATGGCACTGTCTTGCTGTGGATGATCAAGGCCGAGCTTATGCCTGGGGTGGTAATGAATATGGTCAGTGTGGTGAAGAACCTGAGAAGAAAGATGACACTGGGAGGCCACCGAGAAGAGATATAGCAATTCCTCAACGATGTGCTCCAAAACTAATAGTTCAACAGGTTGCTGCAGGAGGTACACACTCTGTGGTACTTACACGTGAAGGACATGTATGGACGTGGGGCCAACCATGGCCACCTGGAGATATAAAGCAAATTTCTGTTCCTGTACGAGTTCAAGGTCTCGATATGGTGAGGCTTATTGCAGTTGGGGCATTTCATAATTTAGCTCTCCAAGAAGATGGAACTTTATGGGCATGGGGTAATAATGAATATGGACAACTTGGAACTGGTGACACACAACCAAGATCACAGCCAATTCCTGTCCAAGGGCTTTCTGGTCTTAATTTGGTTGACATTGCAGCTGGAGGATGGCATTCAACTGCATTGACAGATAGCGGAGAGGTTTATGGATGGGGGCGAGGAGAACATGGGAGGCTTGGGTTTGGAGATAATGACAAGAGCAGCAAAATGGTTCCCCAGAAGGTTCAACTTCTGTCTGGAGAGGACATTGTTCAGGTATCATGTGGAGGCACACACTCAGTTGCAGTAACCAGTGACGGCCGCATGTTTTCGTTTGGGCGAGGCGACCATGGGCGGCTTGGATATGGAAGGAAGGTAACAACTGGGCAACCAGAGGAAGTTCCGATTGACATTGCACCTCCTCGTGGGAGGACTGAGCATGGCCGTTGGATTGCCAAACTTGTTGCCTGCGGTGGCCGCCATACATTAGCTCTGGTACAATGGAAACCTGAGGATTAA

Protein sequence

MAADTAIIAWGSGEDGQLGLGNNEESEWVCAIKALESQNVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAGTKAENVPSQVKALGNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDDTGRPPRRDIAIPQRCAPKLIVQQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEDIVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIAPPRGRTEHGRWIAKLVACGGRHTLALVQWKPED

Homology

[Close]

BLAST of Lsi03G002350 vs. Swiss-Prot
Match: UVR8_ARATH (Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.7e-51
Identity = 122/353 (34.56%), Postives = 191/353 (54.11%), Query Frame = 1


Query: 7   IIAWGSGEDGQLGLGNNEESEWVCAIKALESQNVCSVVAGSRNSLAICEDG-KLFTWGWN 66
           + +WG GEDGQLG G+ E+      + AL+   + SV  G+ +++A  + G ++++WGW 
Sbjct: 36  VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWG 95

Query: 67  QRGTLGHPAGTKAENVPSQVKALGNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 126
             G LGH   +     P  +KAL  ++I Q A G  HCLAV  +G   +WG N+ GQ G 
Sbjct: 96  DFGRLGH-GNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLG- 155

Query: 127 EPEKKDDTGRPPRRDIAIPQRCAP--KLIVQQVAAGGTHSVVLTREGHVWTWGQPWPP-- 186
                 DT      D  +PQ+      + ++ VAAG  H+  +T +G ++ WG  W    
Sbjct: 156 ----LGDT-----EDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWG--WGRYG 215

Query: 187 ----GDIKQISVPVRVQ--GLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQ 246
               GD     VP RV   G + + ++A G  H +++   G L+ +G ++YGQLG GD +
Sbjct: 216 NLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLE 275

Query: 247 PRSQPIPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDN-DKSSKMVP 306
               P  ++ LS   +  I+ G  H+ ALT  G++YGWG  + G++G G+N D+ S   P
Sbjct: 276 DHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS---P 335

Query: 307 QKVQLLSGEDIVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPE 348
            +V+    + +VQVSCG  H++AVT    +F++GRG +G+LG G  V    P+
Sbjct: 336 VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPK 372

[Close]

BLAST of Lsi03G002350 vs. Swiss-Prot
Match: HERC2_MOUSE (E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3)

HSP 1 Score: 194.9 bits (494), Expect = 1.6e-48
Identity = 126/389 (32.39%), Postives = 192/389 (49.36%), Query Frame = 1


Query: 7    IIAWGSGEDGQLGLGNNEESEWVCAIKALESQNVCSVVAGSRNSLAICEDGKLFTWGWNQ 66
            I  WG    GQLG     + +     +AL +     ++ G +   A+  DGKL+  G+  
Sbjct: 3956 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4015

Query: 67   RGTLGHPAGTKAENVPSQVKALGNVKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCG 126
             G LG   GT++ + P+ ++++ +V I + A+  GG HCLA+  +G  Y+WG  E G+ G
Sbjct: 4016 GGRLGI-GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075

Query: 127  EEPEKKDDTGRPPRRDIAIPQRCAPKLIVQQVAAGGTHSVVLTREGHVWTWGQP----WP 186
                   D  R       I         V  VAAGG HS  +T  G ++TWG+       
Sbjct: 4076 HGNRSPCDRPRVIESLRGIE--------VVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4135

Query: 187  PGDIKQISVPVRVQGLDMVRLIAV----GAFHNLALQEDGTLWAWGNNEYGQLGTGDTQP 246
              D +    P  V+ L   R+I +    G    L L +D T+W+WG+ +YG+LG G +  
Sbjct: 4136 HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4195

Query: 247  RSQPIPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 306
               P+ +  L+GL +V +  G   S ALT SG VY WG+G++ RLG G +D   +  P++
Sbjct: 4196 CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQ 4255

Query: 307  VQLLSGEDIVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIAPP 366
            VQ L G+ ++ ++ G  H V  T DG ++++G  D G+LG G    T    + P  +A  
Sbjct: 4256 VQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG----TTNAIQRPRLVAAL 4315

Query: 367  RGRTEHGRWIAKLVACGGRHTLALVQWKP 386
            +G+          VACG  HTLA    KP
Sbjct: 4316 QGKK------VNRVACGSAHTLAWSTSKP 4323

[Close]

BLAST of Lsi03G002350 vs. Swiss-Prot
Match: HERC2_HUMAN (E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2)

HSP 1 Score: 194.5 bits (493), Expect = 2.1e-48
Identity = 125/389 (32.13%), Postives = 192/389 (49.36%), Query Frame = 1


Query: 7    IIAWGSGEDGQLGLGNNEESEWVCAIKALESQNVCSVVAGSRNSLAICEDGKLFTWGWNQ 66
            I  WG    GQLG     + +     +AL +     ++ G +   A+  DGKL+  G+  
Sbjct: 3954 IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4013

Query: 67   RGTLGHPAGTKAENVPSQVKALGNVKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQCG 126
             G LG   GT++ + P+ ++++ +V I + A+  GG HCLA+  +G  Y+WG  E G+ G
Sbjct: 4014 GGRLGI-GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4073

Query: 127  EEPEKKDDTGRPPRRDIAIPQRCAPKLIVQQVAAGGTHSVVLTREGHVWTWGQP----WP 186
                   D  R       I         V  VAAGG HS  +T  G ++TWG+       
Sbjct: 4074 HGNRSPCDRPRVIESLRGIE--------VVDVAAGGAHSACVTAAGDLYTWGKGRYGRLG 4133

Query: 187  PGDIKQISVPVRVQGLDMVRLIAV----GAFHNLALQEDGTLWAWGNNEYGQLGTGDTQP 246
              D +    P  V+ L   R++ +    G    L L +D T+W+WG+ +YG+LG G +  
Sbjct: 4134 HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4193

Query: 247  RSQPIPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 306
               P+ +  L+GL +V +  G   S ALT SG VY WG+G++ RLG G +D   +  P++
Sbjct: 4194 CKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR--PRQ 4253

Query: 307  VQLLSGEDIVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIAPP 366
            VQ L G+ ++ ++ G  H V  T DG ++++G  D G+LG G    T    + P  +A  
Sbjct: 4254 VQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG----TTNAIQRPRLVAAL 4313

Query: 367  RGRTEHGRWIAKLVACGGRHTLALVQWKP 386
            +G+          VACG  HTLA    KP
Sbjct: 4314 QGKK------VNRVACGSAHTLAWSTSKP 4321

[Close]

BLAST of Lsi03G002350 vs. Swiss-Prot
Match: HERC2_DROME (Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster GN=HERC2 PE=1 SV=3)

HSP 1 Score: 189.9 bits (481), Expect = 5.2e-47
Identity = 125/393 (31.81%), Postives = 182/393 (46.31%), Query Frame = 1


Query: 5    TAIIAWGSGEDGQLGLGNNEESEWVCAIKALESQNVCSVVAGSRNSLAICEDGKLFTWGW 64
            + I  WG    GQLG       +     +AL       +  G ++  A+  DGKLF  G+
Sbjct: 4049 STIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGY 4108

Query: 65   NQRGTLGHPAGTKAENVPSQVKALGNVKIVQAAI--GGWHCLAVDDQGRAYAWGGNEYGQ 124
               G LG   G+ +  +P+ + +L +V + + A+  GG HCLA+  +G  YAWG  E G+
Sbjct: 4109 GSGGRLG-VGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGK 4168

Query: 125  CGEEPEKKDDTGRPPRRDIAIPQRCAPKLI-------VQQVAAGGTHSVVLTREGHVWTW 184
             G       D                PKL+       V  +A G  HS  +T  GHV TW
Sbjct: 4169 LGHGNRMSYD---------------RPKLVEHLNGMSVADIACGSAHSAAITASGHVLTW 4228

Query: 185  GQ----PWPPGDIKQISVPVRVQGLDMVRLIAV----GAFHNLALQEDGTLWAWGNNEYG 244
            G+        GD +    P  V+ L   R I +    G    L + +D  +W+WG+ +YG
Sbjct: 4229 GKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYG 4288

Query: 245  QLGTGDTQPRSQPIPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDND 304
            +LG G +     P  ++ L+GL +V +  G   S ALT SG VY WG+G+  RLG G  D
Sbjct: 4289 KLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4348

Query: 305  KSSKMVPQKVQLLSGEDIVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPE 364
               +  P+KV  L G+ I+ ++ G  H VA +  G ++++G  D G+LG G      +P 
Sbjct: 4349 HVRR--PKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPR 4408

Query: 365  EVPIDIAPPRGRTEHGRWIAKLVACGGRHTLAL 381
             V             G+ I K V CG  HTLAL
Sbjct: 4409 LV---------AALQGKHIVK-VTCGSAHTLAL 4413

[Close]

BLAST of Lsi03G002350 vs. Swiss-Prot
Match: HERC4_RAT (Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus GN=Herc4 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 5.1e-42
Identity = 116/346 (33.53%), Postives = 177/346 (51.16%), Query Frame = 1


Query: 7   IIAWGSGEDGQLGLGNNEESEWVCAIKA--LESQNVCSVVAGSRNSLAICEDGKLFTWGW 66
           ++ WG+   GQLGLG  +E   +   K+    ++ V  V  G R+++ + +DG ++T G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 67  NQRGTLGHPAGTKAENVPSQVKALGNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 126
           N  G LGH    K+   P QV AL    IV  + G  H LA++D+G+ YAWG +  GQ G
Sbjct: 61  NDLGQLGHE---KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 120

Query: 127 EEPEKKDDTGRPPRRDIAIPQRCAPKLIVQQVAAGGTHSVVLTREGHVWTWGQPWPPGDI 186
              +  ++  R PR   ++       + + QVA G  HS+ L++   V+ WGQ       
Sbjct: 121 --LQGSEECIRVPRNIKSLSD-----IQIVQVACGYYHSLALSKASEVFCWGQ----NKY 180

Query: 187 KQISVPVRVQGLDMVRLI-----------AVGAFHNLALQEDGTLWAWGNNEYGQLGTGD 246
            Q+ + +  Q     +LI           A G  H+  L   G ++ WG N++GQLG  D
Sbjct: 181 GQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 240

Query: 247 TQPRSQPIPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDNDKSSKMV 306
              R  P  ++ L    +V I  G  H+ ALT  G V+ +G G +G+L  G N  S ++ 
Sbjct: 241 ENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQL--GHNSTSHEIN 300

Query: 307 PQKVQLLSGEDIVQVSCGGTHSVA-VTSDGRMFSFGRGDHGRLGYG 339
           P+KV  L G  + Q++CG  H+ A V S GR++SFG G +G+LG G
Sbjct: 301 PRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

[Close]

BLAST of Lsi03G002350 vs. TrEMBL
Match: A0A0A0KXQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G644530 PE=4 SV=1)

HSP 1 Score: 786.9 bits (2031), Expect = 1.1e-224
Identity = 371/387 (95.87%), Postives = 378/387 (97.67%), Query Frame = 1


Query: 1   MAADTAIIAWGSGEDGQLGLGNNEESEWVCAIKALESQNVCSVVAGSRNSLAICEDGKLF 60
           MAA TAIIAWGSGEDGQLGLGNNEE EWVCAIKALESQNVCSVVAGSRNSLAI EDGKLF
Sbjct: 1   MAAGTAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLF 60

Query: 61  TWGWNQRGTLGHPAGTKAENVPSQVKALGNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
           TWGWNQRGTLGHPAGTK+ENVPSQVKAL NVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY
Sbjct: 61  TWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 121 GQCGEEPEKKDDTGRPPRRDIAIPQRCAPKLIVQQVAAGGTHSVVLTREGHVWTWGQPWP 180
           GQCGEEPEKKD+TGRPPRRDIAIPQRCAPKLIV+QVAAGGTHSVVLTREGHVWTWGQPWP
Sbjct: 121 GQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 180

Query: 181 PGDIKQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240
           PGDI QISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP
Sbjct: 181 PGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240

Query: 241 IPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLL 300
           IPVQGLSGL LVDIAAGGWHSTALTD+GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLL
Sbjct: 241 IPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLL 300

Query: 301 SGEDIVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIAPPRGRT 360
           SGE+IVQ+SCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDI PPRGRT
Sbjct: 301 SGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRT 360

Query: 361 EHGRWIAKLVACGGRHTLALVQWKPED 388
           E+G WIAKLVACGGRHTLALVQWK ED
Sbjct: 361 ENGHWIAKLVACGGRHTLALVQWKSED 387

[Close]

BLAST of Lsi03G002350 vs. TrEMBL
Match: A0A067K9Z1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12968 PE=4 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 5.0e-206
Identity = 337/389 (86.63%), Postives = 361/389 (92.80%), Query Frame = 1


Query: 1   MAADTAIIAWGSGEDGQLGLGNNEESEWVCAIKALESQNVCSVVAGSRNSLAICEDGKLF 60
           MA  T++IAWGSGEDGQLGLG NEE EWVC ++ALE   V SVVAGSRNSLAIC+DGKLF
Sbjct: 1   MATHTSLIAWGSGEDGQLGLGTNEEKEWVCVVEALEPYKVRSVVAGSRNSLAICDDGKLF 60

Query: 61  TWGWNQRGTLGHPAGTKAENVPSQVKALGNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
           TWGWNQRGTLGHP+GTK ENVPSQVKAL +V IVQAAIGGWHCLAVDDQGRAYAWGGNEY
Sbjct: 61  TWGWNQRGTLGHPSGTKTENVPSQVKALASVSIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 121 GQCGEEPEKKDDTGRPPRRDIAIPQRCAPKLIVQQVAAGGTHSVVLTREGHVWTWGQPWP 180
           GQCGEEPE+K+DTG+P RRDI IPQRCAPKL+V+QVAAGGTHSVVLT EGHVWTWGQPWP
Sbjct: 121 GQCGEEPERKEDTGKPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTCEGHVWTWGQPWP 180

Query: 181 PGDIKQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240
           PGDIKQISVPVRVQGL+ V+LIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP
Sbjct: 181 PGDIKQISVPVRVQGLERVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240

Query: 241 IPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLL 300
           IPVQGL+GLNLVDIAAGGWHSTALTD GEVYGWGRGEHGRLGFGDNDKSSKM+PQ+VQLL
Sbjct: 241 IPVQGLAGLNLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMLPQRVQLL 300

Query: 301 SGEDIVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIAPPR--- 360
           +GEDIVQVSCGGTHSVA+T DGRMFSFGRGDHGRLGYGRKVTTGQP EVPIDI+PPR   
Sbjct: 301 AGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPMEVPIDISPPRSLS 360

Query: 361 GRTEHGRWIAKLVACGGRHTLALVQWKPE 387
           G    G WIAKLVACGGRHTLA+V+W+ +
Sbjct: 361 GTEAEGHWIAKLVACGGRHTLAIVEWQTD 389

[Close]

BLAST of Lsi03G002350 vs. TrEMBL
Match: M5X594_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006886mg PE=4 SV=1)

HSP 1 Score: 723.8 bits (1867), Expect = 1.1e-205
Identity = 333/387 (86.05%), Postives = 357/387 (92.25%), Query Frame = 1


Query: 1   MAADTAIIAWGSGEDGQLGLGNNEESEWVCAIKALESQNVCSVVAGSRNSLAICEDGKLF 60
           MA+D AI+ WGSGEDGQLG+GNNEE EWVC ++AL+S+ V SVVAGSRNSLAIC+DGKLF
Sbjct: 1   MASDAAIVTWGSGEDGQLGIGNNEEMEWVCVVEALQSRTVRSVVAGSRNSLAICDDGKLF 60

Query: 61  TWGWNQRGTLGHPAGTKAENVPSQVKALGNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
           TWGWNQRGTLGHP  TK EN+PSQVKAL N KIVQAAIGGWHCLAVDDQGRAYAWGGNEY
Sbjct: 61  TWGWNQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 121 GQCGEEPEKKDDTGRPPRRDIAIPQRCAPKLIVQQVAAGGTHSVVLTREGHVWTWGQPWP 180
           GQC EEPE+KDDTGRP RRDI IPQRCAPKL+V+QVAAGGTHSVVLTR+G VWTWGQPWP
Sbjct: 121 GQCSEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTRDGQVWTWGQPWP 180

Query: 181 PGDIKQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240
           PGDIKQIS PVRVQGLD V+LIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP
Sbjct: 181 PGDIKQISTPVRVQGLDAVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240

Query: 241 IPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLL 300
           IPVQGLSGL LVDIAAGGWHST+LTD GEVYGWGRGEHGRLGFGDNDKSSKMVPQ+V LL
Sbjct: 241 IPVQGLSGLTLVDIAAGGWHSTSLTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVHLL 300

Query: 301 SGEDIVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIAPPRGRT 360
           +GEDIVQVSCGGTHSVA+T DGRMFSFGRGDHGRLGYGRKVTTGQP EVPI+I P  G  
Sbjct: 301 AGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPMEVPINIPPRNGTE 360

Query: 361 EHGRWIAKLVACGGRHTLALVQWKPED 388
           ++G WIAKLVACGGRHTLA+V WK ++
Sbjct: 361 DNGHWIAKLVACGGRHTLAIVDWKADE 387

[Close]

BLAST of Lsi03G002350 vs. TrEMBL
Match: M5WSN4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006886mg PE=4 SV=1)

HSP 1 Score: 722.2 bits (1863), Expect = 3.3e-205
Identity = 332/387 (85.79%), Postives = 356/387 (91.99%), Query Frame = 1


Query: 1   MAADTAIIAWGSGEDGQLGLGNNEESEWVCAIKALESQNVCSVVAGSRNSLAICEDGKLF 60
           MA+D AI+ WGSGEDGQLG+GNNEE EWVC ++AL+S+ V SVVAGSRNSLAIC+DGKLF
Sbjct: 1   MASDAAIVTWGSGEDGQLGIGNNEEMEWVCVVEALQSRTVRSVVAGSRNSLAICDDGKLF 60

Query: 61  TWGWNQRGTLGHPAGTKAENVPSQVKALGNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
           TWGWNQRGTLGHP  TK EN+PSQVKAL N KIVQAAIGGWHCLAVDDQGRAYAWGGNEY
Sbjct: 61  TWGWNQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 121 GQCGEEPEKKDDTGRPPRRDIAIPQRCAPKLIVQQVAAGGTHSVVLTREGHVWTWGQPWP 180
           GQC EEPE+KDDTGRP RRDI IPQRCAPKL+V+QV AGGTHSVVLTR+G VWTWGQPWP
Sbjct: 121 GQCSEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVTAGGTHSVVLTRDGQVWTWGQPWP 180

Query: 181 PGDIKQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240
           PGDIKQIS PVRVQGLD V+LIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP
Sbjct: 181 PGDIKQISTPVRVQGLDAVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240

Query: 241 IPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLL 300
           IPVQGLSGL LVDIAAGGWHST+LTD GEVYGWGRGEHGRLGFGDNDKSSKMVPQ+V LL
Sbjct: 241 IPVQGLSGLTLVDIAAGGWHSTSLTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVHLL 300

Query: 301 SGEDIVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIAPPRGRT 360
           +GEDIVQVSCGGTHSVA+T DGRMFSFGRGDHGRLGYGRKVTTGQP EVPI+I P  G  
Sbjct: 301 AGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPMEVPINIPPRNGTE 360

Query: 361 EHGRWIAKLVACGGRHTLALVQWKPED 388
           ++G WIAKLVACGGRHTLA+V WK ++
Sbjct: 361 DNGHWIAKLVACGGRHTLAIVDWKADE 387

[Close]

BLAST of Lsi03G002350 vs. TrEMBL
Match: V4SY78_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011926mg PE=4 SV=1)

HSP 1 Score: 719.2 bits (1855), Expect = 2.8e-204
Identity = 339/389 (87.15%), Postives = 356/389 (91.52%), Query Frame = 1


Query: 1   MAADTAIIAWGSGEDGQLGLGNNEESEWVCAIKALESQNVCSVVAGSRNSLAICEDGKLF 60
           MA+ T+IIAWGSGEDGQLG+GNNEE EWVC +KALE   V SVVAGSRNSLAIC+DGKLF
Sbjct: 1   MASTTSIIAWGSGEDGQLGIGNNEEREWVCVVKALEPYKVRSVVAGSRNSLAICDDGKLF 60

Query: 61  TWGWNQRGTLGHPAGTKAENVPSQVKALGNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
           TWGWNQRGTLGHP  TK ENVPSQV AL N KIVQAAIGGWHCLAVDDQGRAYAWGGNEY
Sbjct: 61  TWGWNQRGTLGHPPETKTENVPSQVNALSNTKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 121 GQCGEEPEKKDDTGRPPRRDIAIPQRCAPKLIVQQVAAGGTHSVVLTREGHVWTWGQPWP 180
           GQCGEEPE+KDDTGR  RRDI IPQRCAPKLIV+QVAAGGTHSVVLTREGHVWTWGQPWP
Sbjct: 121 GQCGEEPERKDDTGRILRRDIVIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 180

Query: 181 PGDIKQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240
           PGDIKQISVPVRVQGL+ V+LIAVGAFHNLALQEDG LWAWGNNEYGQLGTGDTQPRSQP
Sbjct: 181 PGDIKQISVPVRVQGLEQVKLIAVGAFHNLALQEDGALWAWGNNEYGQLGTGDTQPRSQP 240

Query: 241 IPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLL 300
           IPVQGLSGL LVDIAAGGWHSTALTD GEVYGWGRGEHGRLGFGDNDKSSKMVPQKV LL
Sbjct: 241 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLL 300

Query: 301 SGEDIVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIAPPR--G 360
           +GEDIVQVSCGGTHSVA+T DG +FSFGRGDHGRLGYGRKVTTGQP EVPI+I  PR  G
Sbjct: 301 AGEDIVQVSCGGTHSVALTRDGHIFSFGRGDHGRLGYGRKVTTGQPMEVPINIPAPRNAG 360

Query: 361 RTEHGRWIAKLVACGGRHTLALVQWKPED 388
               GRWIAKLVACGGRHTLA+V+W+ E+
Sbjct: 361 DGVDGRWIAKLVACGGRHTLAIVEWQTEE 389

[Close]

BLAST of Lsi03G002350 vs. TAIR10
Match: AT5G16040.1 (AT5G16040.1 Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 675.2 bits (1741), Expect = 2.3e-194
Identity = 320/390 (82.05%), Postives = 345/390 (88.46%), Query Frame = 1


Query: 1   MAADTAIIAWGSGEDGQLGLGNNEESEWVCAIKALESQNVCSVVAGSRNSLAICEDGKLF 60
           MA+ T++IAWGSGEDGQLGLG +EE E    + ALE  NV SVV GSRNSLAIC+DGKLF
Sbjct: 1   MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLF 60

Query: 61  TWGWNQRGTLGHPAGTKAENVPSQVKALGNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
           TWGWNQRGTLGHP  TK E+ PS VK+L NVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY
Sbjct: 61  TWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 121 GQCGEEPEKKDDTGRPPRRDIAIPQRCAPKLIVQQVAAGGTHSVVLTREGHVWTWGQPWP 180
           GQCGEEP K D+TGRP RRDI IP+RCA +L V+QVAAGGTHSVVLTREG+VWTWGQPWP
Sbjct: 121 GQCGEEPSK-DETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWP 180

Query: 181 PGDIKQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240
           PGDIKQISVPVRVQGL+ VRLIAVGAFHNLAL+EDGTLWAWGNNEYGQLGTGDTQPRS P
Sbjct: 181 PGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYP 240

Query: 241 IPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLL 300
           IPVQGL  L LVDIAAGGWHSTALT+ GEVYGWGRGEHGRLGFGDNDKSSKM+PQKV LL
Sbjct: 241 IPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLL 300

Query: 301 SGEDIVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIAPPRGRT 360
           +GEDI+QVSCGGTHSVA+T DGR+FSFGRGDHGRLGYGRKVTTGQP E+PI I PP GR 
Sbjct: 301 AGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRF 360

Query: 361 EH------GRWIAKLVACGGRHTLALVQWK 385
            H      G+WIAK VACGGRHTLA+V+WK
Sbjct: 361 NHTDEEDDGKWIAKHVACGGRHTLAIVEWK 389

[Close]

BLAST of Lsi03G002350 vs. TAIR10
Match: AT3G02510.1 (AT3G02510.1 Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 672.5 bits (1734), Expect = 1.5e-193
Identity = 315/393 (80.15%), Postives = 341/393 (86.77%), Query Frame = 1


Query: 1   MAADTAIIAWGSGEDGQLGLGNNEESEWVCAIKALESQNVCSVVAGSRNSLAICEDGKLF 60
           M   T+IIAWGSGEDGQLG+G NEE EW C ++ALE  +V SVV+GSRNSLAIC+DG +F
Sbjct: 1   MVTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMF 60

Query: 61  TWGWNQRGTLGHPAGTKAENVPSQVKALGNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
           TWGWNQRGTLGH   TK EN+PS+VKAL NVKI QAAIGGWHCLAVDDQGRAYAWGGNEY
Sbjct: 61  TWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 121 GQCGEEPEKKDDTGRPPRRDIAIPQRCAPKLIVQQVAAGGTHSVVLTREGHVWTWGQPWP 180
           GQCGEEP  KD+ GRP RRDI IP+RCAPKL V+QVAAGGTHSVVLTREGHVWTWGQPWP
Sbjct: 121 GQCGEEP-LKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWP 180

Query: 181 PGDIKQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240
           PGDIKQISVPVRVQGL+ VRLIAVGAFHNLAL+EDG L AWGNNEYGQLGTGDTQP S P
Sbjct: 181 PGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHP 240

Query: 241 IPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLL 300
           +PVQGL  L LVDIAAGGWHSTALTD GEVYGWGRGEHGRLG GDNDKSSKMVPQKV LL
Sbjct: 241 VPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLL 300

Query: 301 SGEDIVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIAPPRGRT 360
           + EDI+QVSCGGTHSVA+T DGR+FSFGRGDHGRLGYGRKVTTGQP E+PI I PP G  
Sbjct: 301 AEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSF 360

Query: 361 EH------GRWIAKLVACGGRHTLALVQWKPED 388
            H      G+W AK +ACGGRHTLA+V+WK +D
Sbjct: 361 NHTDEEEEGKWSAKSIACGGRHTLAIVEWKSDD 392

[Close]

BLAST of Lsi03G002350 vs. TAIR10
Match: AT5G63860.1 (AT5G63860.1 Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 204.1 bits (518), Expect = 1.5e-52
Identity = 122/353 (34.56%), Postives = 191/353 (54.11%), Query Frame = 1


Query: 7   IIAWGSGEDGQLGLGNNEESEWVCAIKALESQNVCSVVAGSRNSLAICEDG-KLFTWGWN 66
           + +WG GEDGQLG G+ E+      + AL+   + SV  G+ +++A  + G ++++WGW 
Sbjct: 36  VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWG 95

Query: 67  QRGTLGHPAGTKAENVPSQVKALGNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 126
             G LGH   +     P  +KAL  ++I Q A G  HCLAV  +G   +WG N+ GQ G 
Sbjct: 96  DFGRLGH-GNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLG- 155

Query: 127 EPEKKDDTGRPPRRDIAIPQRCAP--KLIVQQVAAGGTHSVVLTREGHVWTWGQPWPP-- 186
                 DT      D  +PQ+      + ++ VAAG  H+  +T +G ++ WG  W    
Sbjct: 156 ----LGDT-----EDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWG--WGRYG 215

Query: 187 ----GDIKQISVPVRVQ--GLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQ 246
               GD     VP RV   G + + ++A G  H +++   G L+ +G ++YGQLG GD +
Sbjct: 216 NLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLE 275

Query: 247 PRSQPIPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDN-DKSSKMVP 306
               P  ++ LS   +  I+ G  H+ ALT  G++YGWG  + G++G G+N D+ S   P
Sbjct: 276 DHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS---P 335

Query: 307 QKVQLLSGEDIVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPE 348
            +V+    + +VQVSCG  H++AVT    +F++GRG +G+LG G  V    P+
Sbjct: 336 VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPK 372

[Close]

BLAST of Lsi03G002350 vs. TAIR10
Match: AT5G60870.1 (AT5G60870.1 Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-39
Identity = 105/335 (31.34%), Postives = 170/335 (50.75%), Query Frame = 1


Query: 1   MAADTAIIAWGSGEDGQLGLGNNEESEWVCAIKAL-ESQNVCSVVAGSRNSLAICEDGKL 60
           +  D  +  WG G+ G+LG G  E S +V  +  L E  ++  +  G  +S+A+   G +
Sbjct: 115 LTIDGDLWIWGKGDGGRLGFGQ-ENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDV 174

Query: 61  FTWGWNQRGTLGHPAGTKAENVPSQVKALGNVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 120
           FTWG+   G LGH   T+ E VP +V    + KI   A  G H  A+ + G  Y WG  E
Sbjct: 175 FTWGYGGFGALGHKVYTR-ELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREE 234

Query: 121 Y-GQCGEEPEKKDDTGRPPRRDIAIPQRCAPKLI-VQQVAAGGTHSVVLTREGHVWTWGQ 180
             G+ G  P +  + G      +++P +     + V  V+ GG  ++ LT+EG +W WG 
Sbjct: 235 GDGRLGLGPGRGPNEGG----GLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGA 294

Query: 181 ----PWPPGDIKQISVPVRVQGLDMVRL--IAVGAFHNLALQEDGTLWAWGNNEYGQLGT 240
                   GD      P+ V  L+ VR+  IA G +H+LAL E+G + +WG+  +GQLG+
Sbjct: 295 NSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGS 354

Query: 241 GDTQPRSQPIPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDNDKSSK 300
              + +  P  ++ L+   +V IA+GG  S A+TD GE++ WG  +  +LG        +
Sbjct: 355 SSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGV-PGLPEIQ 414

Query: 301 MVPQKVQLLSGED------IVQVSCGGTHSVAVTS 321
             P +V  L+ ED      ++ +S G +H++ + S
Sbjct: 415 TTPVEVNFLTEEDECQPHKVISISIGASHALCLVS 442

[Close]

BLAST of Lsi03G002350 vs. TAIR10
Match: AT3G02300.1 (AT3G02300.1 Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-35
Identity = 109/370 (29.46%), Postives = 169/370 (45.68%), Query Frame = 1


Query: 50  SLAICEDGKLFTWGWNQRGTLGHPAGTKAENVPSQVK-------ALGNVKIVQAAIGGWH 109
           S++I     ++ WG+NQ G  G     K   +P Q+        A  N + +  + G  H
Sbjct: 13  SVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREH 72

Query: 110 CLAVDDQGRAYAWGGNEYGQCGEEPEKKDDTGRPPRRDIAIPQRCAPKLIVQQVAAGGTH 169
             AV   G  +AWG NEYGQ G+  E     GR   + +   Q    K +     A  T 
Sbjct: 73  TAAVASDGSLFAWGANEYGQLGDGTE----VGRKHPKKVKQLQSEFVKFV--SCGAFCTA 132

Query: 170 SVVLTREG-------HVWTWGQPWPPGDIKQISVPVRVQGL----DMVRLIAVGAFHNLA 229
           ++   RE         +W WGQ       +  ++P    G       +R ++ G  H +A
Sbjct: 133 AIAEPRENDGTLSTSRLWVWGQN------QGSNLPRLFSGAFPATTAIRQVSCGTAHVVA 192

Query: 230 LQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPV---------QGLSGLNLVDIAAGGWHST 289
           L E+G L AWG NE GQLG G T    Q   V         +    + ++ ++ G +H+ 
Sbjct: 193 LSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHTA 252

Query: 290 ALTDSGEVYGWGRGEHGRLGFGDNDKSSK-MVPQKVQLLSGEDIVQVSCGGTHSVAVTSD 349
           AL+D+GEVY WG G  G+LG        K ++P++V  L G  + +V+CGG H+ A++ +
Sbjct: 253 ALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSLE 312

Query: 350 GRMFSFGRGDHGRLGYGRK------VTTGQP---EEVPIDIAPPRGRTEHGRWIAKLVAC 383
           G ++++G G  G+LG G +      V+ G       VP+ + P            +LVAC
Sbjct: 313 GALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTD---------VRLVAC 361

[Close]

BLAST of Lsi03G002350 vs. NCBI nr
Match: gi|659119080|ref|XP_008459465.1| (PREDICTED: ultraviolet-B receptor UVR8 [Cucumis melo])

HSP 1 Score: 799.3 bits (2063), Expect = 3.0e-228
Identity = 377/387 (97.42%), Postives = 381/387 (98.45%), Query Frame = 1


Query: 1   MAADTAIIAWGSGEDGQLGLGNNEESEWVCAIKALESQNVCSVVAGSRNSLAICEDGKLF 60
           MAA TAIIAWGSGEDGQLGLGNNEE EWVCAIKALESQNVCSVVAGSRNSLAICEDGKLF
Sbjct: 1   MAAGTAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAICEDGKLF 60

Query: 61  TWGWNQRGTLGHPAGTKAENVPSQVKALGNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
           TWGWNQRGTLGHPAGTK+ENVPSQVKAL NVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY
Sbjct: 61  TWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 121 GQCGEEPEKKDDTGRPPRRDIAIPQRCAPKLIVQQVAAGGTHSVVLTREGHVWTWGQPWP 180
           GQCGEEPEKKDDTGRPPRRDIAIPQRCAPKLIV+QVAAGGTHSVVLTREGHVWTWGQPWP
Sbjct: 121 GQCGEEPEKKDDTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 180

Query: 181 PGDIKQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240
           PGDI QISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP
Sbjct: 181 PGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240

Query: 241 IPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLL 300
           IPVQGLSGL LVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLL
Sbjct: 241 IPVQGLSGLTLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLL 300

Query: 301 SGEDIVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIAPPRGRT 360
           SGE+IVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDI PPRGRT
Sbjct: 301 SGEEIVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRT 360

Query: 361 EHGRWIAKLVACGGRHTLALVQWKPED 388
           E+GRWIAKLVACGGRHTLALVQWKPED
Sbjct: 361 ENGRWIAKLVACGGRHTLALVQWKPED 387

[Close]

BLAST of Lsi03G002350 vs. NCBI nr
Match: gi|778707617|ref|XP_004141502.2| (PREDICTED: ultraviolet-B receptor UVR8 [Cucumis sativus])

HSP 1 Score: 786.9 bits (2031), Expect = 1.6e-224
Identity = 371/387 (95.87%), Postives = 378/387 (97.67%), Query Frame = 1


Query: 1   MAADTAIIAWGSGEDGQLGLGNNEESEWVCAIKALESQNVCSVVAGSRNSLAICEDGKLF 60
           MAA TAIIAWGSGEDGQLGLGNNEE EWVCAIKALESQNVCSVVAGSRNSLAI EDGKLF
Sbjct: 1   MAAGTAIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLF 60

Query: 61  TWGWNQRGTLGHPAGTKAENVPSQVKALGNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
           TWGWNQRGTLGHPAGTK+ENVPSQVKAL NVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY
Sbjct: 61  TWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 121 GQCGEEPEKKDDTGRPPRRDIAIPQRCAPKLIVQQVAAGGTHSVVLTREGHVWTWGQPWP 180
           GQCGEEPEKKD+TGRPPRRDIAIPQRCAPKLIV+QVAAGGTHSVVLTREGHVWTWGQPWP
Sbjct: 121 GQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWP 180

Query: 181 PGDIKQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240
           PGDI QISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP
Sbjct: 181 PGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240

Query: 241 IPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLL 300
           IPVQGLSGL LVDIAAGGWHSTALTD+GEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLL
Sbjct: 241 IPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLL 300

Query: 301 SGEDIVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIAPPRGRT 360
           SGE+IVQ+SCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDI PPRGRT
Sbjct: 301 SGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIPPPRGRT 360

Query: 361 EHGRWIAKLVACGGRHTLALVQWKPED 388
           E+G WIAKLVACGGRHTLALVQWK ED
Sbjct: 361 ENGHWIAKLVACGGRHTLALVQWKSED 387

[Close]

BLAST of Lsi03G002350 vs. NCBI nr
Match: gi|1009127205|ref|XP_015880570.1| (PREDICTED: ultraviolet-B receptor UVR8 [Ziziphus jujuba])

HSP 1 Score: 730.7 bits (1885), Expect = 1.3e-207
Identity = 340/390 (87.18%), Postives = 361/390 (92.56%), Query Frame = 1


Query: 1   MAADTAIIAWGSGEDGQLGLGNNEESEWVCAIKALESQNVCSVVAGSRNSLAICEDGKLF 60
           MA++T+II WGSGEDGQLG+G NEE EWVC +KALESQN+ SVVAGSRNSLAIC+DGKLF
Sbjct: 1   MASNTSIIVWGSGEDGQLGIGTNEEKEWVCVVKALESQNLRSVVAGSRNSLAICDDGKLF 60

Query: 61  TWGWNQRGTLGHPAGTKAENVPSQVKALGNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
           TWGWNQRGTLGHP  TK ENVPSQV AL N KIVQAAIGGWHCLAVDDQGRAYAWGGNEY
Sbjct: 61  TWGWNQRGTLGHPPETKTENVPSQVNALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 121 GQCGEEPEKKDDTGRPPRRDIAIPQRCAPKLIVQQVAAGGTHSVVLTREGHVWTWGQPWP 180
           GQCGEEPE+KDDTG+P RRDI IPQRCAPKL+V+QVAAGGTHSVVLTREGHVWTWGQPWP
Sbjct: 121 GQCGEEPERKDDTGKPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQPWP 180

Query: 181 PGDIKQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240
           PGDIKQIS+PVRVQGL+ VRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP
Sbjct: 181 PGDIKQISIPVRVQGLEEVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240

Query: 241 IPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLL 300
           IPVQGLSGL LVDIAAGGWHSTALTD GEVYGWGRGEHGRLGFGDNDKSSKMVPQ+VQLL
Sbjct: 241 IPVQGLSGLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVQLL 300

Query: 301 SGEDIVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIAPPR--- 360
           +GEDIVQVSCGGTHSVA+T DGRMFSFGRGDHGRLGYGRKVTTGQP EVPI+I PPR   
Sbjct: 301 AGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPMEVPINIPPPRNAS 360

Query: 361 GRTEHGRWIAKLVACGGRHTLALVQWKPED 388
           G    G WIAK VACGGRHTLA+V+WK ++
Sbjct: 361 GSEAEGHWIAKYVACGGRHTLAIVEWKVDE 390

[Close]

BLAST of Lsi03G002350 vs. NCBI nr
Match: gi|694332861|ref|XP_009357048.1| (PREDICTED: ultraviolet-B receptor UVR8 [Pyrus x bretschneideri])

HSP 1 Score: 729.6 bits (1882), Expect = 2.9e-207
Identity = 339/387 (87.60%), Postives = 359/387 (92.76%), Query Frame = 1


Query: 1   MAADTAIIAWGSGEDGQLGLGNNEESEWVCAIKALESQNVCSVVAGSRNSLAICEDGKLF 60
           MA+D AI  WGSGEDGQLG+GNNEE EWVCA+KALESQ + SVVAGSRNSLAIC+DGKLF
Sbjct: 1   MASDAAIATWGSGEDGQLGIGNNEEKEWVCAVKALESQTIRSVVAGSRNSLAICDDGKLF 60

Query: 61  TWGWNQRGTLGHPAGTKAENVPSQVKALGNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
           TWGWNQRGTLGHP  TK EN+PSQVKAL +VKIVQAAIGGWHCLAVDDQGRAYAWGGNEY
Sbjct: 61  TWGWNQRGTLGHPPETKTENIPSQVKALASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 121 GQCGEEPEKKDDTGRPPRRDIAIPQRCAPKLIVQQVAAGGTHSVVLTREGHVWTWGQPWP 180
           GQCGEEPE+KDDTGRP RRDIAIPQRCAPKL V+QVAAGGTHSVVLTR+G VWTWGQPWP
Sbjct: 121 GQCGEEPERKDDTGRPLRRDIAIPQRCAPKLKVRQVAAGGTHSVVLTRDGQVWTWGQPWP 180

Query: 181 PGDIKQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240
           PGDIKQIS PVRVQGLD VRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP
Sbjct: 181 PGDIKQISTPVRVQGLDAVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240

Query: 241 IPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLL 300
           IPVQGLSGLNLVDIAAGGWHSTALT+ GEVYGWGRGEHGRLGFGDNDKSSKMVPQ+V LL
Sbjct: 241 IPVQGLSGLNLVDIAAGGWHSTALTEEGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVHLL 300

Query: 301 SGEDIVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIAPPRGRT 360
           +GEDIVQVSCGGTHSVA+T DGRM+SFGRGDHGRLGYGRKVTTGQP EVPI I P  G  
Sbjct: 301 AGEDIVQVSCGGTHSVALTRDGRMYSFGRGDHGRLGYGRKVTTGQPMEVPISIPPRNGTA 360

Query: 361 EHGRWIAKLVACGGRHTLALVQWKPED 388
           ++G WIAKLVA GGRHTLA+V+WK +D
Sbjct: 361 DNGHWIAKLVASGGRHTLAIVEWKADD 387

[Close]

BLAST of Lsi03G002350 vs. NCBI nr
Match: gi|645248649|ref|XP_008230391.1| (PREDICTED: ultraviolet-B receptor UVR8 [Prunus mume])

HSP 1 Score: 726.1 bits (1873), Expect = 3.3e-206
Identity = 335/387 (86.56%), Postives = 358/387 (92.51%), Query Frame = 1


Query: 1   MAADTAIIAWGSGEDGQLGLGNNEESEWVCAIKALESQNVCSVVAGSRNSLAICEDGKLF 60
           MA+D AI+ WGSGEDGQLG+GNNEE EWVC ++AL+S+ V SVVAGSRNSLAIC+DGKLF
Sbjct: 1   MASDAAIVTWGSGEDGQLGIGNNEEKEWVCVVEALQSRTVRSVVAGSRNSLAICDDGKLF 60

Query: 61  TWGWNQRGTLGHPAGTKAENVPSQVKALGNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
           TWGWNQRGTLGHP  TK EN+PSQVKAL NVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY
Sbjct: 61  TWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120

Query: 121 GQCGEEPEKKDDTGRPPRRDIAIPQRCAPKLIVQQVAAGGTHSVVLTREGHVWTWGQPWP 180
           GQC EEPE+KDDTGRP RRDI IPQRCAPKL+V+QVAAGGTHSVVLTR+G VWTWGQPWP
Sbjct: 121 GQCSEEPERKDDTGRPLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTRDGQVWTWGQPWP 180

Query: 181 PGDIKQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240
           PGDIKQIS PVRVQGLD V+LIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP
Sbjct: 181 PGDIKQISTPVRVQGLDAVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQP 240

Query: 241 IPVQGLSGLNLVDIAAGGWHSTALTDSGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLL 300
           IPVQGLSGL LVDIAAGGWHSTALTD GEVYGWGRGEHGRLGFGDNDKSSKMVPQ+V LL
Sbjct: 241 IPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVHLL 300

Query: 301 SGEDIVQVSCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPIDIAPPRGRT 360
           +GEDIVQVSCGGTHSVA+T DGRMFSFGRGDHGRLGYGRKVTTGQP EVPI+I P  G  
Sbjct: 301 AGEDIVQVSCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGQPMEVPINIPPRNGTE 360

Query: 361 EHGRWIAKLVACGGRHTLALVQWKPED 388
           ++G WIAKLVACGGRHTLA+V WK ++
Sbjct: 361 DNGHWIAKLVACGGRHTLAIVVWKADE 387

The following BLAST results are available for this feature:

BLAST of Lsi03G002350 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UVR8_ARATH	2.7e-51	34.56	Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1	[more]
HERC2_MOUSE	1.6e-48	32.39	E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3	[more]
HERC2_HUMAN	2.1e-48	32.13	E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2	[more]
HERC2_DROME	5.2e-47	31.81	Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster GN=HERC2 P...	[more]
HERC4_RAT	5.1e-42	33.53	Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus GN=Herc4 PE=2 SV...	[more]

BLAST of Lsi03G002350 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXQ1_CUCSA	1.1e-224	95.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G644530 PE=4 SV=1	[more]
A0A067K9Z1_JATCU	5.0e-206	86.63	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12968 PE=4 SV=1	[more]
M5X594_PRUPE	1.1e-205	86.05	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006886mg PE=4 SV=1	[more]
M5WSN4_PRUPE	3.3e-205	85.79	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006886mg PE=4 SV=1	[more]
V4SY78_9ROSI	2.8e-204	87.15	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011926mg PE=4 SV=1	[more]

BLAST of Lsi03G002350 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16040.1	2.3e-194	82.05	Regulator of chromosome condensation (RCC1) family protein	[more]
AT3G02510.1	1.5e-193	80.15	Regulator of chromosome condensation (RCC1) family protein	[more]
AT5G63860.1	1.5e-52	34.56	Regulator of chromosome condensation (RCC1) family protein	[more]
AT5G60870.1	1.1e-39	31.34	Regulator of chromosome condensation (RCC1) family protein	[more]
AT3G02300.1	1.3e-35	29.46	Regulator of chromosome condensation (RCC1) family protein	[more]

BLAST of Lsi03G002350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119080\|ref\|XP_008459465.1\|	3.0e-228	97.42	PREDICTED: ultraviolet-B receptor UVR8 [Cucumis melo]	[more]
gi\|778707617\|ref\|XP_004141502.2\|	1.6e-224	95.87	PREDICTED: ultraviolet-B receptor UVR8 [Cucumis sativus]	[more]
gi\|1009127205\|ref\|XP_015880570.1\|	1.3e-207	87.18	PREDICTED: ultraviolet-B receptor UVR8 [Ziziphus jujuba]	[more]
gi\|694332861\|ref\|XP_009357048.1\|	2.9e-207	87.60	PREDICTED: ultraviolet-B receptor UVR8 [Pyrus x bretschneideri]	[more]
gi\|645248649\|ref\|XP_008230391.1\|	3.3e-206	86.56	PREDICTED: ultraviolet-B receptor UVR8 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009091	RCC1/BLIP-II
IPR000408	Reg_chr_condens

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0019904	protein domain specific binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G002350.1	Lsi03G002350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000408	Regulator of chromosome condensation, RCC1	PRINTS	PR00633	RCCNDNSATION	coord: 6..22 score: 1.8E-19coord: 317..338 score: 1.8E-19coord: 40..53 score: 1.8E-19coord: 156..172 score: 1.8E-19coord: 59..75 score: 1.8
IPR000408	Regulator of chromosome condensation, RCC1	PFAM	PF00415	RCC1	coord: 321..380 score: 1.5E-12coord: 267..318 score: 1.1E-17coord: 9..53 score: 6.3E-7coord: 215..264 score: 9.5E-15coord: 110..166 score: 2.8E-9coord: 56..106 score: 2.7
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS00626	RCC1_2	coord: 370..380 scor
IPR000408	Regulator of chromosome condensation, RCC1	PROFILE	PS50012	RCC1_3	coord: 57..109 score: 14.725coord: 170..215 score: 9.318coord: 322..383 score: 12.936coord: 5..56 score: 12.313coord: 268..321 score: 19.69coord: 110..169 score: 15.006coord: 216..267 score: 17
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	GENE3D	G3DSA:2.130.10.30		coord: 3..382 score: 1.8E
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	unknown	SSF50985	RCC1/BLIP-II	coord: 5..177 score: 4.05E-41coord: 136..381 score: 6.67
None	No IPR available	PANTHER	PTHR22870	REGULATOR OF CHROMOSOME CONDENSATION	coord: 5..387 score: 4.5E
None	No IPR available	PANTHER	PTHR22870:SF206	SUBFAMILY NOT NAMED	coord: 5..387 score: 4.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi03G002350	Csa5G644530	Cucumber (Chinese Long) v2	culsiB353
Lsi03G002350	CSPI05G30050	Wild cucumber (PI 183967)	cpilsiB357
Lsi03G002350	Cucsa.238080	Cucumber (Gy14) v1	cgylsiB387
Lsi03G002350	CmaCh15G001870	Cucurbita maxima (Rimu)	cmalsiB276
Lsi03G002350	CmaCh04G028580	Cucurbita maxima (Rimu)	cmalsiB668
Lsi03G002350	CmoCh04G029860	Cucurbita moschata (Rifu)	cmolsiB657
Lsi03G002350	CmoCh15G002000	Cucurbita moschata (Rifu)	cmolsiB265
Lsi03G002350	Cla016451	Watermelon (97103) v1	lsiwmB278
Lsi03G002350	MELO3C022092	Melon (DHL92) v3.5.1	lsimeB233
Lsi03G002350	MELO3C022048	Melon (DHL92) v3.5.1	lsimeB232
Lsi03G002350	ClCG11G005390	Watermelon (Charleston Gray)	lsiwcgB226
Lsi03G002350	MELO3C022092.2	Melon (DHL92) v3.6.1	lsimedB243
Lsi03G002350	Cla97C11G212340	Watermelon (97103) v2	lsiwmbB222
Lsi03G002350	Bhi06G000089	Wax gourd	lsiwgoB310
Lsi03G002350	Cp4.1LG01g22110	Cucurbita pepo (Zucchini)	cpelsiB350
Lsi03G002350	Cp4.1LG13g07740	Cucurbita pepo (Zucchini)	cpelsiB143
Lsi03G002350	CsGy5G029430	Cucumber (Gy14) v2	cgyblsiB325
Lsi03G002350	Carg05934	Silver-seed gourd	carlsiB019
Lsi03G002350	Carg02178	Silver-seed gourd	carlsiB236
Lsi03G002350	CsaV3_5G039170	Cucumber (Chinese Long) v3	cuclsiB378

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G002350	Wax gourd	lsiwgoB322
Lsi03G002350	Cucurbita maxima (Rimu)	cmalsiB656
Lsi03G002350	Cucurbita moschata (Rifu)	cmolsiB645
Lsi03G002350	Cucurbita pepo (Zucchini)	cpelsiB339
Lsi03G002350	Silver-seed gourd	carlsiB017