Lsi03G002280 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi03G002280
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr03 : 2857566 .. 2860561 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCGCACGTTGAAGCTAAAAGTAATGAGAATGACGTCGATTAATGAAGTTGAGGGGCGCAATAGTGGTAAGAATCATTAATTTATCTCTAGTTGGTGTTGGATTAATTTTGTAACTTTTGAATGATTTTTTAAAACTAATTTTTACTTTATATTGAATTGCATAGGGTTAATAGTCATCTCTTGTTAGTCATATTGATTGTTGTTTGATATACTAGAGTCACTCTTTTATCTGAAAGAAAAAAGTGGCATTTTTTAGTATATTGAAAGAATAAGGACACATGGTTATAGTAATAGCTGAAGGTGGAGGACAAGAGCTTGTTTCCAAAAACACAAAACAATTGGATGCTTCTAAAAATAAGCTACACGAAGATATCGGTTCTTGGATATCCCAATAAATTAAAGTTTGTTGATCTTACTTATATGATTCGTGTAGTATCTAGCATTGTAGATAACATCTTTTGCACATTTCTTGTTCACAGAGCTATTCACGATGCAATGACAGGATACACAGAATTCACAAGGTCTAGTAAATGAAAAACAAGCTTACATATCATTTCATGTAAGCCTAAAATTAAAAAAAAAAATTTCCACATTTAGTTACTTTTGACTAATTGTTAATAAACATGATGAAAAGATGTTAAATATCTCAACATAGATCAAACTTATGTTGCCCTTATATGTGCAACGAATAAGTGAAAGAGATAGAATAAAGTTGTGATAAACGAAGTGGATGAGACTATTGTCTTCTACCAACCAACCAACTTTCTTGAATTTTAGACAAGTCAGCGTTGACAAAAATAACAGTACTATACCAAGAGATAATATTACAATATTATATAAAAATTAAGTCTAAAAGTCTATAATATTCCATTAATTTCTAGTTTTTTTAATAAAAAAATAAAAAGACACAAATATGGAAAAGAAAATATGAAAATCATGTGCATAATCTTTTCTGAATTTTCAAAACCATCACAAAAAGAAATTTCCATTTTCATTAAATTTAAGAGATTTTATTTCTTCCTTAATTTGTCTTACAAATTTTTTTTTTACAAATTTTAAATTTTGACTTAAAATTCAGAATCCTCAAATTAGTGGATTGCATTTAATACATAATTATAATACCAAATTTTGGTTTTTATTTAATTTTTTAAGGTTTATTTAAAATATATACGACGTTATTTCAAATATATACAATGTTTATTTAAAATATATTTAGAACAATTATAAATTTTAGGTTATATAATATATAGGGGTCTTTTCACAAATAGAAAAAAAAATAAAACTAATTACACATATAGAAAAAAAGTGGAAAATAGAAAAGCATGGGGTGCACTTTTTTCTATATGTGTAATTAATTTTGTTTTTTTTTTCTATACACAATAATTTCCCTAATATTATACTCTATATTATAATTTTGGTCTCATTTCTTTTAAGATATATATTTCATTTACTTTGTCAATATTTAGTCATTTTGCAAATATATGTCACATATTATATAATAATAATGTTAGGAAAAATTAAAAAAAATCAATACTTGGGATTTTCACCTAAAATACTTTGTTTGAAGAAGTTTCACAGCAAATAATTTTGGAAACCCATCACATATTCTTAAGATTTGGAGATATATAACATATCTGTTAACGAAGAAAATAAGAAATAACTAAATGGAAAACATATGATGATATATTTCGTAATTAGTAATTAATAATTAATAAAAAAAATCTCTAAATAATTAATATTAAATTTATTTTGTCTTCTTTTAATATTCTAATTATAAAATATTATAAAAATTAATAAGCGAAAGAATATACTATAAGGTTAAATTTGTCCAAAAATATAAAAATCTAGATATAAAATATCGTTCAAGTTTAGATTATTTATGAAGTATTAGTGATGGAGTAGGTTAATTATTTAAATTTTATTGGGTAGATTTGGGCCCATTTTGAAATTTAGTAAACATTTTGGCTCCAGTTTCCCAAAATATACACATATATAAATGGCCCCGAAGAACGTGCGAATATTATGATCACCGTTATTGGCCGTCCGAGTTGAAAACGAAGAAGCTGCCTCTCCTCCATCGCGCACTTCTCTGTTTTTGCTGCCTCTGATTTTGCCGTCACATCTCGCCGCCGCCGGATCTCGCCCCTGATCCTCTCTGTGTTTTGTGGTGCGTTCTTCCCTCTCTCAGTTTCTTCTCTATTTACATACATTCTTCTAATTTCAGACGGTGGTTGAATCTTCAACAGTAGGATTTGGTATTCATTTCCGTTCTCCAAGATTACGAATCTCTTCTTTTCTAAATTTCTAATCTAGGTATACGTTTCACCATTCTCAGTTAAAGTTACATTGCTGTTTAGGCATTTAGTTAGGGCCCAATTGCCCCTCTCTGTTCTCAAAAATTGCTGATTATTTTATAGTTAATACAAAGTTGATTTGGATGGAGTTTTTGCAATGTGAATTAAAGGTTTAATGTTCCTAGGGTTCATAAAGTATATTACAAAATTTAAACTTCGTTTGATTTATGGGAAACCTTGATAGAAATCATGAGACACAAGAAAGTAGTAATGTATTTTATGAGTTACATCACGAGGACAATTTTCTAATGTTATAGGCTAAATCCAGTAAAAGTGCATGAAAGAATCTCTTGTGTCGTACCTTATTCAAAGTATTCTTTCTTAAGGTTATCAATTTTATGTGTAGTTAGTTGCTGGCTTTGAATTTTCCCTTCTCTTACTATACTTCTGAATCTCTGATGCCTTGCAATTTGGTCGGGTAATTTGTTGTTTGGGATGGTATTTTGATTTATTAGTGTAGCTTCGCGAGCAGTTTTTGTAATATCATTTATGTAGATTTAGTTTTGATCTTGATCTACTCGTTCCCATATATTGTAGGTTGGACAAATCTCTAACTTCAAGCATGTCTGGAGAAGAAGAAGAAAATGCTGCGGAGCTTAAAATTGGGGATGGTACCAATCTTTCTGTACATCTCTGA

mRNA sequence

ATGTTGCGCACGTTGAAGCTAAAAGTAATGAGAATGACGTCGATTAATGAAGTTGAGGGGCGCAATAGTGTATCTAGCATTGTAGATAACATCTTTTGCACATTTCTTGTTCACAGAGCTATTCACGATGCAATGACAGGATACACAGAATTCACAAGGTTGGACAAATCTCTAACTTCAAGCATGTCTGGAGAAGAAGAAGAAAATGCTGCGGAGCTTAAAATTGGGGATGGTACCAATCTTTCTGTACATCTCTGA

Coding sequence (CDS)

ATGTTGCGCACGTTGAAGCTAAAAGTAATGAGAATGACGTCGATTAATGAAGTTGAGGGGCGCAATAGTGTATCTAGCATTGTAGATAACATCTTTTGCACATTTCTTGTTCACAGAGCTATTCACGATGCAATGACAGGATACACAGAATTCACAAGGTTGGACAAATCTCTAACTTCAAGCATGTCTGGAGAAGAAGAAGAAAATGCTGCGGAGCTTAAAATTGGGGATGGTACCAATCTTTCTGTACATCTCTGA

Protein sequence

MLRTLKLKVMRMTSINEVEGRNSVSSIVDNIFCTFLVHRAIHDAMTGYTEFTRLDKSLTSSMSGEEEENAAELKIGDGTNLSVHL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G002280.1Lsi03G002280.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi03G002280Cucurbita maxima (Rimu)cmalsiB276
Lsi03G002280Cucurbita maxima (Rimu)cmalsiB656
Lsi03G002280Cucurbita maxima (Rimu)cmalsiB668
Lsi03G002280Cucurbita moschata (Rifu)cmolsiB265
Lsi03G002280Cucurbita moschata (Rifu)cmolsiB363
Lsi03G002280Cucurbita moschata (Rifu)cmolsiB645
Lsi03G002280Cucurbita moschata (Rifu)cmolsiB657
Lsi03G002280Cucurbita pepo (Zucchini)cpelsiB143
Lsi03G002280Cucurbita pepo (Zucchini)cpelsiB339
Lsi03G002280Cucurbita pepo (Zucchini)cpelsiB350
Lsi03G002280Wild cucumber (PI 183967)cpilsiB357
Lsi03G002280Wild cucumber (PI 183967)cpilsiB362
Lsi03G002280Cucumber (Chinese Long) v2culsiB353
Lsi03G002280Cucumber (Chinese Long) v2culsiB359
Lsi03G002280Melon (DHL92) v3.5.1lsimeB232
Lsi03G002280Melon (DHL92) v3.5.1lsimeB233
Lsi03G002280Melon (DHL92) v3.5.1lsimeB238
Lsi03G002280Watermelon (Charleston Gray)lsiwcgB245
Lsi03G002280Watermelon (Charleston Gray)lsiwcgB226
Lsi03G002280Watermelon (97103) v1lsiwmB258
Lsi03G002280Watermelon (97103) v1lsiwmB278
Lsi03G002280Cucumber (Gy14) v2cgyblsiB325
Lsi03G002280Melon (DHL92) v3.6.1lsimedB243
Lsi03G002280Melon (DHL92) v3.6.1lsimedB249
Lsi03G002280Silver-seed gourdcarlsiB017
Lsi03G002280Silver-seed gourdcarlsiB019
Lsi03G002280Silver-seed gourdcarlsiB236
Lsi03G002280Cucumber (Chinese Long) v3cuclsiB378
Lsi03G002280Cucumber (Chinese Long) v3cuclsiB384
Lsi03G002280Watermelon (97103) v2lsiwmbB222
Lsi03G002280Watermelon (97103) v2lsiwmbB238
Lsi03G002280Wax gourdlsiwgoB310
Lsi03G002280Wax gourdlsiwgoB322
Lsi03G002280Wax gourdlsiwgoB342
Lsi03G002280Cucumber (Gy14) v1cgylsiB387
Lsi03G002280Cucumber (Gy14) v1cgylsiB464