Lsi03G002120 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCAACGTTTTGGCACAATATTCGATAAGATTTTGCTGCCACGTCCGTTTTCTTATGAATAACACATTGCCACGTGGTTATTTGATGGCTTTATTTCTTCAATAGTTTTTCCATCTAAATCTTTTTCTTGTGGAAAAGAAAAGTAGACCAAGCAACTAAAATAAATGAAAGGAAGGGAAATGGTAATAATCTTGAAAAATAGTAATAAAATCCAATCTAATTTTTTAAAATAAGGTTTATAAACACTATTTCACCCATAATTCTTCGTATGTTTTGATTGATTGTGACATATTTTGAACACTTTTTTAATTTGACAACTGATAAAAGTAATGTTGTATTTGATTGATAGGCAAGTTTCGTGGTGACTAAAGTGAGTGCAATTTGTCCATTGAGATTACTGGAGAGAGTTAGCGACTTATTAAGATGGCAACAAAAGAACCCTAGTTTCAATCTTCCATGGAAGCTCGAAACTTTGCCAATTTTCTCAGAATCAAGCCCTCTTTACCACACTCTTGAACAACCAAAACCCTTAACAAATGAAGAAGAAAAAAGCCTCCAAATGAGCCATGAAAGGCTAATGAAAATTTGTGAAAGTTGTGTTGATGCCAATATTCCTTTAGCCATTGATGCTGAACATACCAAAGTTCAACCAGCCATTGATTACTTCACTTATTCAGCTGCCATTATTCACAACAAAGACCACAATCCAATAGTTTATGGAACAATTCAAGCCTATCTAAAAGATGCAAAAGATAGACTTTTGTTAGTTACCAAAGAAGCTACCAAAATGAAAGTTCCACTTGGTATTAAGCTTGTGAGAGGTGCTTATATGTCAAGTGAATCCAAACTTGCTTCTTCTCTTGGCTTTGAATCTCCAATTCACAATACAATTCAAGATACACATTTTTGCTACAATACTTGTGCATCTTTCTTGCTTGACAACATCGCCAAAGGCTCGAGTGGAGCTATTCTTGCAACCCATAACATCGAATCAGGTAATGAATTATGCTCTATGCTCTATGCTCTTCTTATTTCCAAACCGACCCAGTTGTTTGATAACCATTTCGGTTTCTTTTGAATAGGGAAATTGGCAGCTAGTAAAGCATATGAGATAGGGATAGGAAAGTTGAAGCAAAAGCTTGAGTTTGCTCAATTGTATGGAATGTCAGAAGCACTTTCTTTTGGGTTGAGAAATGCAGGGTTTCAAGTGAGTAAATACATGCCATTTGGACCTGTGGATATGGTAATGCCATACCTTTTAAGAAGAGCTGAAGAGAATAGAGGTCTCTTATCAACTTCAAATTTGGATAGACAACTTATGAGGTAATTCAAAACATATTTAATTAATTTTCATATAGTATGTTGAAAATTTTGTTAAACTATTTACAGAAAAATAACAAAAAAAAAAAAAAAAAACACGGATAGACATTATCAACTTCTATCAGCATCTATCAGTGATAAAACTTCTATCATTTCTATCCGCGTCTATCACAACTATCTAAACATTTTACTATTTTGTGTAAATAGTTTTTTTTATTTTTTTATTTTTAAAAATTCTCTTAGTATATATATGGATTTGACACATTTGAAATTTCTTGATTCTTTGCAGAAGGGAGATGGGAAGGAGGATGAAAGAGTACTTTAGGTGAAAAGAAAGGGCCTTTTAGCAATTTCAACAACCTACAACACCAAGATTTGCAATTTTTGTTTATAGGATCACACATGGTTTTAAAAACCTACTTTGTTTTGTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTAAAATCAAACAAAAGTTAAATTGCAAAACCACTTTGGTGAACAAAAAATATAATGTTTACTTAAAATATATATGTGGTTAAGTTACAAATTTATAATTCTTTTTTAGGATAAAAATTATGATGTTGGAAATCAAATTTAGAACTGTTTTCAAATATAAAAAAATGAGTTAAATTATTTACGAATATAGAAATTTTTTACTACATATTAAGGATAAACCGATTATAAAACTTGAACAATAAATAAGAATAGTCAAGTCAGTGAAATTTTTTAATATTTATAAATAATCTGATTTTTTTTGTTTAACAGTAATTTCTCAAAAAAAGTAAAAAAAGCGGTTGTGAGTTCAATCTATAGTGGCCATATTTAATATCCTACGATAAGTTGGCAGGCTGCCTGTTATAGGGTCGGGTGGATTGTCTCGTGAGATTAATAGAGATGGGCGTAAGTTGTCCAGACACTCACGGATATAAAAAAAGAAAAAACACATTAATTTCCCACAAAAACACAGTAATTTCCCACAAAATTAAGTATATTTATCATAAATAATTTAATTCTTAATTTAACTGAAAAAATATTCTCACCCACTCTTCTTCCCAACCCGTCTGAAATCGGACGCTCTCTCTGCTCTCTCTCCCTCCTTAACTTACCGCCGGCCGCCTTCTCTCTCCGTCTCCGGCATTCAGGGATCAGTTTCTCCTGTCTCTCAAGAAACCGATCGCTTCACAGAATACAGCAACCAACAGTAAGTCCTACAAATAGAATAATCGGAAGCATTTTTTAATAATTTTACTTCAATTGAGAGTATGATTGGAGGCTGTTTTTGGATCCTTTAAGTGTCATCTTACTTGTTCAATTGATCAATTCAACCCTATCTTGTGTATCGTATTCGTATTCTACGCCTCAATTTGGAGATTATATATATAATTTTCTTTTATTTATTCAACACTATCAGTGAATTAGATTCTCGAGAATCTCCTCTTTTGGCTTTGGAGTTTTTAACATTTCCTCTGTCGACACTGAGGCAGAAAGCAGAATAAAGTGGCAATGCGGAAAGTGCTCGTAACTTGTTATAGATCATCCATATCAGAATTTTTCAATTCCGTTTTCTTCTGGGTTCAAATTCAAACCTACCTGCGAATTTAATTTATGATGGTGGTGCAGAAGCCCTAGAGGTACGAAATTCCTTTGCTATCTTCAACGATCTCAATCAAATATACAAAGATATAGGGTTTGCGAAATTGTTATTCTTTACCTTTCTGTTATGGGATGTCGAGGTTGAATTTGCTTAGAAGCGATGATATGTGCTTCATTCGATGAAATTCGTTTCCCAAAACATGGATGTTTCGAAGAAAATCCATTAATTTTTCCTTAAATAAGTATTATTGAGCTTCTGCATCATTGACAGGCTGCGTCTTTCTTTTTAGGGATTTCTGGGTAG ATGGTCAACGTTTTGGCACAATATTCGATAAGATTTTGCTGCCACGCAAGTTTCGTGGTGACTAAAGTGAGTGCAATTTGTCCATTGAGATTACTGGAGAGAGTTAGCGACTTATTAAGATGGCAACAAAAGAACCCTAGTTTCAATCTTCCATGGAAGCTCGAAACTTTGCCAATTTTCTCAGAATCAAGCCCTCTTTACCACACTCTTGAACAACCAAAACCCTTAACAAATGAAGAAGAAAAAAGCCTCCAAATGAGCCATGAAAGGCTAATGAAAATTTGTGAAAGTTGTGTTGATGCCAATATTCCTTTAGCCATTGATGCTGAACATACCAAAGTTCAACCAGCCATTGATTACTTCACTTATTCAGCTGCCATTATTCACAACAAAGACCACAATCCAATAGTTTATGGAACAATTCAAGCCTATCTAAAAGATGCAAAAGATAGACTTTTGTTAGTTACCAAAGAAGCTACCAAAATGAAAGTTCCACTTGGTATTAAGCTTGTGAGAGGTGCTTATATGTCAAGTGAATCCAAACTTGCTTCTTCTCTTGGCTTTGAATCTCCAATTCACAATACAATTCAAGATACACATTTTTGCTACAATACTTGTGCATCTTTCTTGCTTGACAACATCGCCAAAGGCTCGAGTGGAGCTATTCTTGCAACCCATAACATCGAATCAGGTAATGAATTATGCTCTATGCTCTATGCTCTTCTTATTTCCAAACCGACCCAGTTGTTTGATAACCATTTCGGGTTTCAAGTGAGTAAATACATGCCATTTGGACCTGTGGATATGGTAATGCCATACCTTTTAAGAAGAGCTGAAGAGAATAGAGGGTCGGGTGGATTGTCTCGTGAGATTAATAGAGATGGGCGGATCAGTTTCTCCTGTCTCTCAAGAAACCGATCGCTTCACAGAATACAGCAACCAACAGCTGCGTCTTTCTTTTTAGGGATTTCTGGGTAG ATGGTCAACGTTTTGGCACAATATTCGATAAGATTTTGCTGCCACGCAAGTTTCGTGGTGACTAAAGTGAGTGCAATTTGTCCATTGAGATTACTGGAGAGAGTTAGCGACTTATTAAGATGGCAACAAAAGAACCCTAGTTTCAATCTTCCATGGAAGCTCGAAACTTTGCCAATTTTCTCAGAATCAAGCCCTCTTTACCACACTCTTGAACAACCAAAACCCTTAACAAATGAAGAAGAAAAAAGCCTCCAAATGAGCCATGAAAGGCTAATGAAAATTTGTGAAAGTTGTGTTGATGCCAATATTCCTTTAGCCATTGATGCTGAACATACCAAAGTTCAACCAGCCATTGATTACTTCACTTATTCAGCTGCCATTATTCACAACAAAGACCACAATCCAATAGTTTATGGAACAATTCAAGCCTATCTAAAAGATGCAAAAGATAGACTTTTGTTAGTTACCAAAGAAGCTACCAAAATGAAAGTTCCACTTGGTATTAAGCTTGTGAGAGGTGCTTATATGTCAAGTGAATCCAAACTTGCTTCTTCTCTTGGCTTTGAATCTCCAATTCACAATACAATTCAAGATACACATTTTTGCTACAATACTTGTGCATCTTTCTTGCTTGACAACATCGCCAAAGGCTCGAGTGGAGCTATTCTTGCAACCCATAACATCGAATCAGGTAATGAATTATGCTCTATGCTCTATGCTCTTCTTATTTCCAAACCGACCCAGTTGTTTGATAACCATTTCGGGTTTCAAGTGAGTAAATACATGCCATTTGGACCTGTGGATATGGTAATGCCATACCTTTTAAGAAGAGCTGAAGAGAATAGAGGGTCGGGTGGATTGTCTCGTGAGATTAATAGAGATGGGCGGATCAGTTTCTCCTGTCTCTCAAGAAACCGATCGCTTCACAGAATACAGCAACCAACAGCTGCGTCTTTCTTTTTAGGGATTTCTGGGTAG MVNVLAQYSIRFCCHASFVVTKVSAICPLRLLERVSDLLRWQQKNPSFNLPWKLETLPIFSESSPLYHTLEQPKPLTNEEEKSLQMSHERLMKICESCVDANIPLAIDAEHTKVQPAIDYFTYSAAIIHNKDHNPIVYGTIQAYLKDAKDRLLLVTKEATKMKVPLGIKLVRGAYMSSESKLASSLGFESPIHNTIQDTHFCYNTCASFLLDNIAKGSSGAILATHNIESGNELCSMLYALLISKPTQLFDNHFGFQVSKYMPFGPVDMVMPYLLRRAEENRGSGGLSREINRDGRISFSCLSRNRSLHRIQQPTAASFFLGISG
BLAST of Lsi03G002120 vs. Swiss-Prot
Match: PROD2_ARATH (Proline dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=POX2 PE=2 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 5.3e-85 Identity = 165/299 (55.18%), Postives = 208/299 (69.57%), Query Frame = 1
BLAST of Lsi03G002120 vs. Swiss-Prot
Match: PROD1_ARATH (Proline dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=POX1 PE=2 SV=2) HSP 1 Score: 307.4 bits (786), Expect = 1.9e-82 Identity = 162/299 (54.18%), Postives = 205/299 (68.56%), Query Frame = 1
BLAST of Lsi03G002120 vs. Swiss-Prot
Match: PROD_DICDI (Proline dehydrogenase 1, mitochondrial OS=Dictyostelium discoideum GN=prodh PE=3 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 2.6e-31 Identity = 99/295 (33.56%), Postives = 150/295 (50.85%), Query Frame = 1
BLAST of Lsi03G002120 vs. Swiss-Prot
Match: PROD_CAEEL (Proline dehydrogenase 1, mitochondrial OS=Caenorhabditis elegans GN=B0513.5 PE=3 SV=2) HSP 1 Score: 112.1 bits (279), Expect = 1.2e-23 Identity = 77/261 (29.50%), Postives = 128/261 (49.04%), Query Frame = 1
BLAST of Lsi03G002120 vs. Swiss-Prot
Match: PROD_DROME (Proline dehydrogenase 1, mitochondrial OS=Drosophila melanogaster GN=slgA PE=2 SV=2) HSP 1 Score: 104.8 bits (260), Expect = 1.9e-21 Identity = 83/288 (28.82%), Postives = 128/288 (44.44%), Query Frame = 1
BLAST of Lsi03G002120 vs. TrEMBL
Match: A0A0A0KXN4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G643300 PE=4 SV=1) HSP 1 Score: 464.5 bits (1194), Expect = 1.0e-127 Identity = 239/296 (80.74%), Postives = 254/296 (85.81%), Query Frame = 1
BLAST of Lsi03G002120 vs. TrEMBL
Match: V9M5A2_MANES (Proline oxidase OS=Manihot esculenta GN=ProDH PE=2 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 9.7e-102 Identity = 191/295 (64.75%), Postives = 227/295 (76.95%), Query Frame = 1
BLAST of Lsi03G002120 vs. TrEMBL
Match: A0A151RH61_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_036702 PE=4 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 2.8e-101 Identity = 187/295 (63.39%), Postives = 230/295 (77.97%), Query Frame = 1
BLAST of Lsi03G002120 vs. TrEMBL
Match: A0A0B2Q656_GLYSO (Proline dehydrogenase 2, mitochondrial OS=Glycine soja GN=glysoja_046995 PE=4 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 3.7e-101 Identity = 187/295 (63.39%), Postives = 229/295 (77.63%), Query Frame = 1
BLAST of Lsi03G002120 vs. TrEMBL
Match: M5X4N6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004722mg PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 1.1e-100 Identity = 176/282 (62.41%), Postives = 228/282 (80.85%), Query Frame = 1
BLAST of Lsi03G002120 vs. TAIR10
Match: AT5G38710.1 (AT5G38710.1 Methylenetetrahydrofolate reductase family protein) HSP 1 Score: 315.8 bits (808), Expect = 3.0e-86 Identity = 165/299 (55.18%), Postives = 208/299 (69.57%), Query Frame = 1
BLAST of Lsi03G002120 vs. TAIR10
Match: AT3G30775.1 (AT3G30775.1 Methylenetetrahydrofolate reductase family protein) HSP 1 Score: 307.4 bits (786), Expect = 1.1e-83 Identity = 162/299 (54.18%), Postives = 205/299 (68.56%), Query Frame = 1
BLAST of Lsi03G002120 vs. NCBI nr
Match: gi|778707546|ref|XP_004141603.2| (PREDICTED: proline dehydrogenase 2, mitochondrial-like [Cucumis sativus]) HSP 1 Score: 464.5 bits (1194), Expect = 1.5e-127 Identity = 239/296 (80.74%), Postives = 254/296 (85.81%), Query Frame = 1
BLAST of Lsi03G002120 vs. NCBI nr
Match: gi|659119046|ref|XP_008459446.1| (PREDICTED: proline dehydrogenase 2, mitochondrial [Cucumis melo]) HSP 1 Score: 463.4 bits (1191), Expect = 3.3e-127 Identity = 237/296 (80.07%), Postives = 254/296 (85.81%), Query Frame = 1
BLAST of Lsi03G002120 vs. NCBI nr
Match: gi|1009127021|ref|XP_015880472.1| (PREDICTED: proline dehydrogenase 2, mitochondrial-like [Ziziphus jujuba]) HSP 1 Score: 383.3 bits (983), Expect = 4.3e-103 Identity = 190/295 (64.41%), Postives = 229/295 (77.63%), Query Frame = 1
BLAST of Lsi03G002120 vs. NCBI nr
Match: gi|442022546|gb|AGC51786.1| (proline oxidase [Manihot esculenta]) HSP 1 Score: 378.3 bits (970), Expect = 1.4e-101 Identity = 191/295 (64.75%), Postives = 227/295 (76.95%), Query Frame = 1
BLAST of Lsi03G002120 vs. NCBI nr
Match: gi|1000961151|ref|XP_002521220.2| (PREDICTED: proline dehydrogenase 2, mitochondrial, partial [Ricinus communis]) HSP 1 Score: 377.5 bits (968), Expect = 2.4e-101 Identity = 190/293 (64.85%), Postives = 221/293 (75.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |