Lsi03G001930 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G001930
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Alpha/beta-Hydrolases superfamily protein
Location	chr03 : 2535273 .. 2535881 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGACGGTAACCTCGTCCATGGCGGCGAAGTTCGCGTTCTTTCCTCCGAATCCTCCGTCGTATAAGGTGGAAGAGGTGGAGGAGGGAACAGGGAAGTTGGTGATGACGGAGGTAGCAGCGAGGGGAAATGTTGATGTTTTGAAGATTAGTACCAAGAGAGGGAACCAGGTTGTGGCTCTGTATGTAAAGAATTTATCGGCTACTTTAACGTTGCTTTATTCTCATGGGAACGCTGCTGATTTGGGGCAGATGTACGACTTGTTTGTGGAGCTTAGTGTTCATCTTCGAGTCAACTTGATGGGGTTTGTGAATCGTTTGGTGTTAAAATGCTTTGTATTTAACTGATGTGAATCTGGGTTTTTTTTAAAGCTGCTTTTGTCATTATGTACATATTTTTAAATTTTTTTTTTTTTTTCATTTTTAGGTACGACTATTCGGGATATGGTCAATCTACTGGAAAGGTATGAAATCTTATTTTTCCGTGTTGATTAGATTCTGTAAGTAACTTTAGAGGATGGAAATCTTTGGAATCTCGGGATCTATGGCTTTGTTTTTAGTTTTGTCTGCTCTATTATTGGAAGAGAAGTGACTGGGAAACTGTGTTAA

mRNA sequence

ATGGGGACGGTAACCTCGTCCATGGCGGCGAAGTTCGCGTTCTTTCCTCCGAATCCTCCGTCGTATAAGGTGGAAGAGGTGGAGGAGGGAACAGGGAAGTTGGTGATGACGGAGGTAGCAGCGAGGGGAAATGTTGATGTTTTGAAGATTAGTACCAAGAGAGGGAACCAGGTTGTGGCTCTGTATGTAAAGAATTTATCGGCTACTTTAACGTTGCTTTATTCTCATGGGAACGCTGCTGATTTGGGGCAGATGTACGACTTGTTTGTGGAGCTTAGTGTTCATCTTCGAGTCAACTTGATGGGGTTTGTGAATCGTTTGGTGTTAAAATGCTTTGTACGACTATTCGGGATATGGTCAATCTACTGGAAAGAGGATGGAAATCTTTGGAATCTCGGGATCTATGGCTTTGTTTTTAGTTTTGTCTGCTCTATTATTGGAAGAGAAGTGACTGGGAAACTGTGTTAA

Coding sequence (CDS)

ATGGGGACGGTAACCTCGTCCATGGCGGCGAAGTTCGCGTTCTTTCCTCCGAATCCTCCGTCGTATAAGGTGGAAGAGGTGGAGGAGGGAACAGGGAAGTTGGTGATGACGGAGGTAGCAGCGAGGGGAAATGTTGATGTTTTGAAGATTAGTACCAAGAGAGGGAACCAGGTTGTGGCTCTGTATGTAAAGAATTTATCGGCTACTTTAACGTTGCTTTATTCTCATGGGAACGCTGCTGATTTGGGGCAGATGTACGACTTGTTTGTGGAGCTTAGTGTTCATCTTCGAGTCAACTTGATGGGGTTTGTGAATCGTTTGGTGTTAAAATGCTTTGTACGACTATTCGGGATATGGTCAATCTACTGGAAAGAGGATGGAAATCTTTGGAATCTCGGGATCTATGGCTTTGTTTTTAGTTTTGTCTGCTCTATTATTGGAAGAGAAGTGACTGGGAAACTGTGTTAA

Protein sequence

MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGTGKLVMTEVAARGNVDVLKISTKRGNQVVALYVKNLSATLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGFVNRLVLKCFVRLFGIWSIYWKEDGNLWNLGIYGFVFSFVCSIIGREVTGKLC

Homology

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BLAST of Lsi03G001930 vs. Swiss-Prot
Match: AB17C_DANRE (Protein ABHD17C OS=Danio rerio GN=abhd17c PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.9e-09
Identity = 41/106 (38.68%), Postives = 56/106 (52.83%), Query Frame = 1


Query: 6   SSMAAKFAFFPPNPPSYKVEEVEEGTGKLVMTEVA-------ARGNVDVLKISTKRGNQV 65
           S +AAK AF PP P +Y V     G   L +TE A           V+VL   T RGN+V
Sbjct: 27  SRIAAKLAFLPPEP-TYSVHTDPSGATSLHLTERADWQYSQRELDAVEVLVTRTSRGNRV 86

Query: 66  VALYVKNLSAT-LTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGF 104
             ++V+   A+  TLL+SHGNA DLGQM   ++ L   +  N+  +
Sbjct: 87  GCMFVRCAPASRYTLLFSHGNAVDLGQMCSFYIGLGSRINCNVFSY 131

[Close]

BLAST of Lsi03G001930 vs. Swiss-Prot
Match: AB17B_XENLA (Protein ABHD17B OS=Xenopus laevis GN=abhd17b PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.4e-06
Identity = 32/104 (30.77%), Postives = 53/104 (50.96%), Query Frame = 1


Query: 8   MAAKFAFFPPNPPSYKVEEVEEGTGKLVMTEVA-------ARGNVDVLKISTKRGNQVVA 67
           +A+K AF PP+P    + +       L ++E A        +  ++     T RGN++  
Sbjct: 22  IASKLAFLPPDPTYTLICDESGSRWTLHLSERADWQYSSREKDAIECFMTRTSRGNRIAC 81

Query: 68  LYVKNL-SATLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGF 104
           ++V+   SA  TLL+SHGNA DLGQM   ++ L   +  N+  +
Sbjct: 82  MFVRCCPSAKYTLLFSHGNAVDLGQMSSFYIGLGSRINCNIFSY 125

[Close]

BLAST of Lsi03G001930 vs. Swiss-Prot
Match: AB17B_XENTR (Protein ABHD17B OS=Xenopus tropicalis GN=abhd17b PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-06
Identity = 31/104 (29.81%), Postives = 54/104 (51.92%), Query Frame = 1


Query: 8   MAAKFAFFPPNPPSYKVEEVEEGTGKLVMTEVA-------ARGNVDVLKISTKRGNQVVA 67
           +A+K AF PP+P    + +       L ++E A        +  ++     T RGN++  
Sbjct: 22  IASKLAFLPPDPTYTLICDESGSRWTLHLSERADWQYSSREKDAIECFMTRTSRGNRIAC 81

Query: 68  LYVK-NLSATLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGF 104
           ++V+ + +A  TLL+SHGNA DLGQM   ++ L   +  N+  +
Sbjct: 82  MFVRCSPNAKYTLLFSHGNAVDLGQMSSFYIGLGSRINCNIFSY 125

[Close]

BLAST of Lsi03G001930 vs. Swiss-Prot
Match: AB17A_MOUSE (Protein ABHD17A OS=Mus musculus GN=Abhd17a PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-06
Identity = 38/124 (30.65%), Postives = 56/124 (45.16%), Query Frame = 1


Query: 8   MAAKFAFFPPNPPSYKVEEVEEGTG--------------------KLVMTEVA------- 67
           +AAK AF PP+P    V E E G G                    K+ +TE A       
Sbjct: 22  IAAKLAFLPPDPTYSLVPEPEPGPGGAGAAPSGPLRTSAATPGRWKIHLTERADFQYGQR 81

Query: 68  ARGNVDVLKISTKRGNQVVALYVKNL-SATLTLLYSHGNAADLGQMYDLFVELSVHLRVN 104
               ++V    + R N++  +YV+ +  A  T+L+SHGNA DLGQM   +V L   +  N
Sbjct: 82  ELDTIEVFVTKSARANRIACMYVRCVPGARYTVLFSHGNAVDLGQMCSFYVGLGTRIGCN 141

[Close]

BLAST of Lsi03G001930 vs. Swiss-Prot
Match: AB17A_RAT (Protein ABHD17A OS=Rattus norvegicus GN=Abhd17a PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.4e-06
Identity = 38/124 (30.65%), Postives = 55/124 (44.35%), Query Frame = 1


Query: 8   MAAKFAFFPPNPPSYKVEEVEEGTG--------------------KLVMTEVA------- 67
           +AAK AF PP P    V E E G G                    K+ +TE A       
Sbjct: 22  IAAKLAFLPPEPTYSLVPEPEPGPGGAGAAPSGPLRTSAATPGRWKIHLTERADFQYGQR 81

Query: 68  ARGNVDVLKISTKRGNQVVALYVKNL-SATLTLLYSHGNAADLGQMYDLFVELSVHLRVN 104
               ++V    + R N++  +YV+ +  A  T+L+SHGNA DLGQM   +V L   +  N
Sbjct: 82  ELDTIEVFVTKSARANRIACMYVRCVPGARYTVLFSHGNAVDLGQMCSFYVGLGTRIGCN 141

[Close]

BLAST of Lsi03G001930 vs. TrEMBL
Match: A0A0A0KSI2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G642170 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.6e-46
Identity = 97/103 (94.17%), Postives = 100/103 (97.09%), Query Frame = 1


Query: 1   MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGTGKLVMTEVAARGNVDVLKISTKRGNQVVA 60
           MGTVTSSMAAKFAFFPPNPPSYKVEEVEEG+GKLVMTEVA R NVDVLK+STKRGNQVVA
Sbjct: 1   MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGSGKLVMTEVATRRNVDVLKLSTKRGNQVVA 60

Query: 61  LYVKNLSATLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGF 104
           LYVKNLSA LTLLYSHGNAADLGQMYDLFVELSVHLRVNLMG+
Sbjct: 61  LYVKNLSANLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGY 103

[Close]

BLAST of Lsi03G001930 vs. TrEMBL
Match: A0A068U1E5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00039717001 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.4e-36
Identity = 81/103 (78.64%), Postives = 92/103 (89.32%), Query Frame = 1


Query: 1   MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGTGKLVMTEVAARGNVDVLKISTKRGNQVVA 60
           MG VTS+MAAKFAFFPPNPPSY V E +EGTGKL MT VA R NVDVL+++TKRG ++VA
Sbjct: 1   MGAVTSTMAAKFAFFPPNPPSYGVAE-DEGTGKLRMTGVAERDNVDVLRLATKRGARIVA 60

Query: 61  LYVKNLSATLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGF 104
           LYVKN +A+LTLLYSHGNAADLGQMYDLF ELS+HLRVNLMG+
Sbjct: 61  LYVKNPAASLTLLYSHGNAADLGQMYDLFSELSLHLRVNLMGY 102

[Close]

BLAST of Lsi03G001930 vs. TrEMBL
Match: A0A0K9QKV0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_174010 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-34
Identity = 76/103 (73.79%), Postives = 90/103 (87.38%), Query Frame = 1


Query: 1   MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGTGKLVMTEVAARGNVDVLKISTKRGNQVVA 60
           MG VTS+MAAKFAFFPP+PPSYKV   EEGTGKL MTEVA R N DVLK+ TKRGN++VA
Sbjct: 1   MGAVTSTMAAKFAFFPPDPPSYKVV-AEEGTGKLKMTEVAERENADVLKLGTKRGNEIVA 60

Query: 61  LYVKNLSATLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGF 104
           ++++N  A LT+LYSHGNAADLGQMY+LF ELS+HL+VNLMG+
Sbjct: 61  VFMRNPMAKLTVLYSHGNAADLGQMYELFGELSIHLKVNLMGY 102

[Close]

BLAST of Lsi03G001930 vs. TrEMBL
Match: A0A0D6QZN4_ARACU (Uncharacterized protein OS=Araucaria cunninghamii PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.9e-34
Identity = 75/103 (72.82%), Postives = 92/103 (89.32%), Query Frame = 1


Query: 1   MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGTGKLVMTEVAARGNVDVLKISTKRGNQVVA 60
           MG VTSSMAAKFAFFPPNPPSYK+  V+E TG+++MT+V  R NVDVLK+ T+RG ++VA
Sbjct: 1   MGAVTSSMAAKFAFFPPNPPSYKIM-VDEMTGRMMMTDVPQRENVDVLKLPTRRGQEIVA 60

Query: 61  LYVKNLSATLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGF 104
           +YV+N  A+LT+LYSHGNAADLGQM++LFVELSVHLRVNLMG+
Sbjct: 61  IYVRNPLASLTVLYSHGNAADLGQMFELFVELSVHLRVNLMGY 102

[Close]

BLAST of Lsi03G001930 vs. TrEMBL
Match: K4BC84_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.9e-34
Identity = 78/103 (75.73%), Postives = 91/103 (88.35%), Query Frame = 1


Query: 1   MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGTGKLVMTEVAARGNVDVLKISTKRGNQVVA 60
           MG VTSSMAAKFAFFPPNPPSY V  VEE TGKL +TEVAA+ NVDVLK+ TK+G ++VA
Sbjct: 1   MGAVTSSMAAKFAFFPPNPPSYGVV-VEESTGKLKLTEVAAKENVDVLKLPTKKGTEIVA 60

Query: 61  LYVKNLSATLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGF 104
           +Y++N +ATLT+LYSHGNAADLGQMY+LFVELS  LRVNLMG+
Sbjct: 61  VYIRNPAATLTVLYSHGNAADLGQMYELFVELSHLLRVNLMGY 102

[Close]

BLAST of Lsi03G001930 vs. TAIR10
Match: AT3G30380.1 (AT3G30380.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 141.4 bits (355), Expect = 4.8e-34
Identity = 75/104 (72.12%), Postives = 87/104 (83.65%), Query Frame = 1


Query: 1   MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGTGKLVMTEVA-ARGNVDVLKISTKRGNQVV 60
           MG VTSSMAAKFAFFPPNPPSY VE VE   GKL +  V   + NV+VLK+ TKRGNQVV
Sbjct: 1   MGAVTSSMAAKFAFFPPNPPSYGVEVVE---GKLRLIGVENVKENVEVLKLKTKRGNQVV 60

Query: 61  ALYVKNLSATLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGF 104
           A Y+KN +A+LTLLYSHGNAADLGQM++LF ELS+HLRVNL+G+
Sbjct: 61  AAYIKNPTASLTLLYSHGNAADLGQMFELFSELSLHLRVNLIGY 101

[Close]

BLAST of Lsi03G001930 vs. TAIR10
Match: AT3G01690.1 (AT3G01690.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 134.8 bits (338), Expect = 4.5e-32
Identity = 65/103 (63.11%), Postives = 86/103 (83.50%), Query Frame = 1


Query: 1   MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGTGKLVMTEVAARGNVDVLKISTKRGNQVVA 60
           MG VTSS+AAKFAFFPP+PPSYKV   +E TG L+++    R NV+++K+ T+RG ++V 
Sbjct: 1   MGGVTSSVAAKFAFFPPSPPSYKVV-TDELTGLLLLSPFPHRENVEIVKLRTRRGTEIVG 60

Query: 61  LYVKNLSATLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGF 104
           +YV++  AT TLLYSHGNAADLGQMY+LF+ELS+HL+VNLMG+
Sbjct: 61  MYVRHPMATSTLLYSHGNAADLGQMYELFIELSIHLKVNLMGY 102

[Close]

BLAST of Lsi03G001930 vs. TAIR10
Match: AT5G14390.1 (AT5G14390.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 133.7 bits (335), Expect = 1.0e-31
Identity = 66/103 (64.08%), Postives = 85/103 (82.52%), Query Frame = 1


Query: 1   MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGTGKLVMTEVAARGNVDVLKISTKRGNQVVA 60
           MG VTSS+AAKFAFFPP+P SYK+   +E TG L+M     R NV++LK+ T+RG ++VA
Sbjct: 1   MGGVTSSVAAKFAFFPPSPSSYKLV-YDELTGLLLMNPFPHRENVEILKLPTRRGTEIVA 60

Query: 61  LYVKNLSATLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGF 104
           +YV++  AT TLLYSHGNAADLGQMY+LF+ELS+HL+VNLMG+
Sbjct: 61  MYVRHPMATSTLLYSHGNAADLGQMYELFIELSIHLKVNLMGY 102

[Close]

BLAST of Lsi03G001930 vs. TAIR10
Match: AT4G24760.1 (AT4G24760.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 132.5 bits (332), Expect = 2.2e-31
Identity = 64/103 (62.14%), Postives = 82/103 (79.61%), Query Frame = 1


Query: 1   MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGTGKLVMTEVAARGNVDVLKISTKRGNQVVA 60
           MG VTSSMAAK AFFPPNPPSYK+   +E T   +M+    R NVD+L++ T+RG ++VA
Sbjct: 1   MGGVTSSMAAKLAFFPPNPPSYKLVR-DETTELFLMSPFPHRENVDILRLPTRRGTEIVA 60

Query: 61  LYVKNLSATLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGF 104
           +Y++   A  TLLYSHGNAAD+GQMY+LF+ELS+HLRVNLMG+
Sbjct: 61  MYIRYPMAVTTLLYSHGNAADIGQMYELFIELSIHLRVNLMGY 102

[Close]

BLAST of Lsi03G001930 vs. TAIR10
Match: AT1G66900.1 (AT1G66900.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 130.6 bits (327), Expect = 8.5e-31
Identity = 65/103 (63.11%), Postives = 82/103 (79.61%), Query Frame = 1


Query: 1   MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGTGKLVMTEVAARGNVDVLKISTKRGNQVVA 60
           MG VTSS+AAKFAFFPP PPSY+V   +   G+L + E+  R +VD+LK+ T+ GN++VA
Sbjct: 1   MGGVTSSIAAKFAFFPPTPPSYEVIADDSCGGRLYIPEIPRRDDVDILKLRTRCGNEIVA 60

Query: 61  LYVKNLSATLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGF 104
           +YVK+  A  TLLYSHGNAADLGQM++LFVELS  LRVNLMG+
Sbjct: 61  VYVKHSKANGTLLYSHGNAADLGQMFELFVELSNRLRVNLMGY 103

[Close]

BLAST of Lsi03G001930 vs. NCBI nr
Match: gi|659118982|ref|XP_008459410.1| (PREDICTED: alpha/beta hydrolase domain-containing protein 17C [Cucumis melo])

HSP 1 Score: 195.7 bits (496), Expect = 6.1e-47
Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGTGKLVMTEVAARGNVDVLKISTKRGNQVVA 60
           MGTVTSSMAAKFAFFPPNPPSYKVEEVEEG+GKLVMTEVA RGNVDVLK+STKRGNQVVA
Sbjct: 1   MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGSGKLVMTEVATRGNVDVLKLSTKRGNQVVA 60

Query: 61  LYVKNLSATLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGF 104
           LYVKNLSA LTLLYSHGNAADLGQMYDLFVELSVHLRVNLMG+
Sbjct: 61  LYVKNLSANLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGY 103

[Close]

BLAST of Lsi03G001930 vs. NCBI nr
Match: gi|449447446|ref|XP_004141479.1| (PREDICTED: alpha/beta hydrolase domain-containing protein 17C isoform X1 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 5.2e-46
Identity = 97/103 (94.17%), Postives = 100/103 (97.09%), Query Frame = 1


Query: 1   MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGTGKLVMTEVAARGNVDVLKISTKRGNQVVA 60
           MGTVTSSMAAKFAFFPPNPPSYKVEEVEEG+GKLVMTEVA R NVDVLK+STKRGNQVVA
Sbjct: 1   MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGSGKLVMTEVATRRNVDVLKLSTKRGNQVVA 60

Query: 61  LYVKNLSATLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGF 104
           LYVKNLSA LTLLYSHGNAADLGQMYDLFVELSVHLRVNLMG+
Sbjct: 61  LYVKNLSANLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGY 103

[Close]

BLAST of Lsi03G001930 vs. NCBI nr
Match: gi|778707502|ref|XP_011656019.1| (PREDICTED: alpha/beta hydrolase domain-containing protein 17C isoform X2 [Cucumis sativus])

HSP 1 Score: 192.6 bits (488), Expect = 5.2e-46
Identity = 97/103 (94.17%), Postives = 100/103 (97.09%), Query Frame = 1


Query: 1   MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGTGKLVMTEVAARGNVDVLKISTKRGNQVVA 60
           MGTVTSSMAAKFAFFPPNPPSYKVEEVEEG+GKLVMTEVA R NVDVLK+STKRGNQVVA
Sbjct: 1   MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGSGKLVMTEVATRRNVDVLKLSTKRGNQVVA 60

Query: 61  LYVKNLSATLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGF 104
           LYVKNLSA LTLLYSHGNAADLGQMYDLFVELSVHLRVNLMG+
Sbjct: 61  LYVKNLSANLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGY 103

[Close]

BLAST of Lsi03G001930 vs. NCBI nr
Match: gi|697130803|ref|XP_009619454.1| (PREDICTED: alpha/beta hydrolase domain-containing protein 17B-like [Nicotiana tomentosiformis])

HSP 1 Score: 159.1 bits (401), Expect = 6.3e-36
Identity = 82/103 (79.61%), Postives = 91/103 (88.35%), Query Frame = 1


Query: 1   MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGTGKLVMTEVAARGNVDVLKISTKRGNQVVA 60
           MG VTSSMAAKFAFFPPNPPSY V  VEE TGKL MTEVAA+ NVDVL++STK+G  +VA
Sbjct: 1   MGGVTSSMAAKFAFFPPNPPSYGVV-VEESTGKLKMTEVAAKENVDVLRLSTKKGKAIVA 60

Query: 61  LYVKNLSATLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGF 104
           +YVKN +ATLTLLYSHGNAADLGQMY+LF ELS HLRVNLMG+
Sbjct: 61  VYVKNPAATLTLLYSHGNAADLGQMYELFTELSHHLRVNLMGY 102

[Close]

BLAST of Lsi03G001930 vs. NCBI nr
Match: gi|661893914|emb|CDP02355.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 159.1 bits (401), Expect = 6.3e-36
Identity = 81/103 (78.64%), Postives = 92/103 (89.32%), Query Frame = 1


Query: 1   MGTVTSSMAAKFAFFPPNPPSYKVEEVEEGTGKLVMTEVAARGNVDVLKISTKRGNQVVA 60
           MG VTS+MAAKFAFFPPNPPSY V E +EGTGKL MT VA R NVDVL+++TKRG ++VA
Sbjct: 1   MGAVTSTMAAKFAFFPPNPPSYGVAE-DEGTGKLRMTGVAERDNVDVLRLATKRGARIVA 60

Query: 61  LYVKNLSATLTLLYSHGNAADLGQMYDLFVELSVHLRVNLMGF 104
           LYVKN +A+LTLLYSHGNAADLGQMYDLF ELS+HLRVNLMG+
Sbjct: 61  LYVKNPAASLTLLYSHGNAADLGQMYDLFSELSLHLRVNLMGY 102

The following BLAST results are available for this feature:

BLAST of Lsi03G001930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AB17C_DANRE	3.9e-09	38.68	Protein ABHD17C OS=Danio rerio GN=abhd17c PE=2 SV=1	[more]
AB17B_XENLA	1.4e-06	30.77	Protein ABHD17B OS=Xenopus laevis GN=abhd17b PE=2 SV=1	[more]
AB17B_XENTR	1.8e-06	29.81	Protein ABHD17B OS=Xenopus tropicalis GN=abhd17b PE=2 SV=1	[more]
AB17A_MOUSE	1.8e-06	30.65	Protein ABHD17A OS=Mus musculus GN=Abhd17a PE=1 SV=1	[more]
AB17A_RAT	2.4e-06	30.65	Protein ABHD17A OS=Rattus norvegicus GN=Abhd17a PE=2 SV=1	[more]

BLAST of Lsi03G001930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSI2_CUCSA	3.6e-46	94.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G642170 PE=4 SV=1	[more]
A0A068U1E5_COFCA	4.4e-36	78.64	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00039717001 PE=4 SV=1	[more]
A0A0K9QKV0_SPIOL	1.4e-34	73.79	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_174010 PE=4 SV=1	[more]
A0A0D6QZN4_ARACU	1.9e-34	72.82	Uncharacterized protein OS=Araucaria cunninghamii PE=4 SV=1	[more]
K4BC84_SOLLC	1.9e-34	75.73	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]

BLAST of Lsi03G001930 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G30380.1	4.8e-34	72.12	alpha/beta-Hydrolases superfamily protein	[more]
AT3G01690.1	4.5e-32	63.11	alpha/beta-Hydrolases superfamily protein	[more]
AT5G14390.1	1.0e-31	64.08	alpha/beta-Hydrolases superfamily protein	[more]
AT4G24760.1	2.2e-31	62.14	alpha/beta-Hydrolases superfamily protein	[more]
AT1G66900.1	8.5e-31	63.11	alpha/beta-Hydrolases superfamily protein	[more]

BLAST of Lsi03G001930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118982\|ref\|XP_008459410.1\|	6.1e-47	95.15	PREDICTED: alpha/beta hydrolase domain-containing protein 17C [Cucumis melo]	[more]
gi\|449447446\|ref\|XP_004141479.1\|	5.2e-46	94.17	PREDICTED: alpha/beta hydrolase domain-containing protein 17C isoform X1 [Cucumi...	[more]
gi\|778707502\|ref\|XP_011656019.1\|	5.2e-46	94.17	PREDICTED: alpha/beta hydrolase domain-containing protein 17C isoform X2 [Cucumi...	[more]
gi\|697130803\|ref\|XP_009619454.1\|	6.3e-36	79.61	PREDICTED: alpha/beta hydrolase domain-containing protein 17B-like [Nicotiana to...	[more]
gi\|661893914\|emb\|CDP02355.1\|	6.3e-36	78.64	unnamed protein product [Coffea canephora]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G001930.1	Lsi03G001930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12277	UNCHARACTERIZED	coord: 1..103 score: 2.2
None	No IPR available	PANTHER	PTHR12277:SF77	SUBFAMILY NOT NAMED	coord: 1..103 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi03G001930	MELO3C022057.2	Melon (DHL92) v3.6.1	lsimedB243
Lsi03G001930	Cla97C11G211820	Watermelon (97103) v2	lsiwmbB222
Lsi03G001930	Bhi06G000265	Wax gourd	lsiwgoB311
Lsi03G001930	Cp4.1LG13g08110	Cucurbita pepo (Zucchini)	cpelsiB143
Lsi03G001930	Cp4.1LG01g22420	Cucurbita pepo (Zucchini)	cpelsiB339
Lsi03G001930	CsGy5G029070	Cucumber (Gy14) v2	cgyblsiB325
Lsi03G001930	Carg02202	Silver-seed gourd	carlsiB236
Lsi03G001930	Carg05903	Silver-seed gourd	carlsiB017
Lsi03G001930	CsaV3_5G038770	Cucumber (Chinese Long) v3	cuclsiB378

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G001930	Melon (DHL92) v3.6.1	lsimedB242
Lsi03G001930	Melon (DHL92) v3.6.1	lsimedB249
Lsi03G001930	Cucumber (Chinese Long) v3	cuclsiB384
Lsi03G001930	Watermelon (97103) v2	lsiwmbB238
Lsi03G001930	Wax gourd	lsiwgoB312
Lsi03G001930	Cucumber (Gy14) v1	cgylsiB387
Lsi03G001930	Cucurbita maxima (Rimu)	cmalsiB276
Lsi03G001930	Cucurbita maxima (Rimu)	cmalsiB656
Lsi03G001930	Cucurbita moschata (Rifu)	cmolsiB265
Lsi03G001930	Cucurbita moschata (Rifu)	cmolsiB645
Lsi03G001930	Wild cucumber (PI 183967)	cpilsiB357
Lsi03G001930	Wild cucumber (PI 183967)	cpilsiB362
Lsi03G001930	Cucumber (Chinese Long) v2	culsiB353
Lsi03G001930	Cucumber (Chinese Long) v2	culsiB359
Lsi03G001930	Melon (DHL92) v3.5.1	lsimeB232
Lsi03G001930	Melon (DHL92) v3.5.1	lsimeB233
Lsi03G001930	Melon (DHL92) v3.5.1	lsimeB238
Lsi03G001930	Watermelon (Charleston Gray)	lsiwcgB245
Lsi03G001930	Watermelon (Charleston Gray)	lsiwcgB226
Lsi03G001930	Watermelon (97103) v1	lsiwmB278