Lsi03G001560 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi03G001560
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCyclic nucleotide-gated ion channel, putative
Locationchr03 : 2155704 .. 2159500 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGACAATAACCCTGTTTTCGTAATAGGATTATCGCGGTGACAAAATATGAAGGCCCACAGCCCCCACCACAGAACCGCCTCCCCCTGCTCCCTCTTCCCTTACCTTGCGTGATCATTCCTAAACCTCTACTTCACAAATCAACTTGATTCCATCTCATCTTCTTCTCCACCACTCTCATGTCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTAATCCTTTCCCTCCACTCTCTCCCATGGTGGTTTCCCCCACTTTCTCTCCATGCCTTCTTTCCTCTCACCTTCTTCCATGTCTGTACTCTATTTCCTTTTCTAATTTCCATTTCCCCCACCCTCTCTTTTCTCTCTTACTAATCAATTTCTTCTTCCATTCCTATTTTCAGGTGGAGCGAGCTTTGCCTGAGGCCAACACCGCCTCCACTCAATGCCCCCGATGAAACCCCCGTCGAATGCTACGCCTGCACTCAAGTCGGCGTTCCAGCCTTCCACTCCACCAGCTGCGACCACGCCCACCAGCAACCCGAATGGGAAGCCTCCGCCGGTTCTTCCCTCGTCCCCATTCAGCCTACCAAACCCTCCCCATCTCGCCGCCCCGCACTGCGACATCCTTCCGGTTGCTTCGGCACCGTTCTCGACCCTAGAACCAAGCCGGTCCAGAGATGGAACCGGGTTCTCTTATTGGCTCGTGGAATGGCTCTCGCTGTTGATCCTCTCTACTTCTACGCACTGTCTATTGGAAGAGGAGGCTCCCCCTGCCTCTACATGGACGGTGGGTTGGCCGCCGTTGTCACCGTCCTCCGCACGTGCCTCGATTTCGTGCACTTGTGGCACGTTTGGCTTCAATTCCGCCTCGCCTACGTGTCCAGAGAGAGTATGGTGATTGGCTGCGGGAAACTCGTGTGGGACGCACGTGCTATCGCCTCTCATTACGTTCGTTCCTTCAAAGGCTTCTGGTTTGATGCCTTCGTTATCCTCCCCGTTCCTCAGGTTTGCTTGCTTTTTTGTCTAATCATTTATTTTTTAAATATATCATTTGGTTGGAATTTAGCTAAGATATGAAAATTATTGTAAATAAATTGTGGGAAAATTTATAGTTTTTTTAAAAGAAAATTACTATAAACAAAAAAAATATCAAACTATTTTACATATATAAAATTTTTTTACTGTCCATTAGTGAGATCGCGATAGAATCCTATCAATTTCTATGATTTAAGTAAATAAATTAGATTTGTTCATATTTATAAATAGTTTGTCTCATTTTTCTATATTTCAAAATAGGCATTTTTTAAAATTAGAAAACAAATAGTTTTCAAATAAAATTATTTTATTTTATTTTTAAGGATGGTAACTTAATAAGTTTTCATTTCACAATTGGAGATAACCTATTCGATTTTTTTTAAAAAAAAATATATATATGCATGTTATAAATATGTATAAATTAATCGTTTGGATAGACTAAAGCAAGTATAGTTATATGTGGTTTGAATCTCTATTTTATTGTATTAAAAAGAAGTTAATCATTTGATTAGAACCAACGATTTAAAATAATGTTTAGCTAGCTAACTTGGAAAATCACTTATTGACAGGGAGTTAATTAATAATAGTTTGATAATTATAGAATTTGTTGGTCAAATGATTGAAAATAAATTGATAAAATTCTAATGTGGCTAAATCACCGACCATATTTTGATTTATTTTCTTCTTGGTTTTTTTTTTTTTAAAGATATCACTTCTCAAGTTGGTTTTTGTGCAAATACACACACTCTCTCTCTTTTAATATTTCGGGTGGTGCAATAATAGAGTGGTCATGGGTTCATATCTTTTGTTCTAACTTTTCATAACATGGTACGAGCAAAATCCTATTATGACTGCCTTTAGTTCTGTATTTGTCTTTTTGTTTATTTGTTTATTTTTTAATTTTTTTTTTCTCTATTCTATTATTAAAGTGCTTATTTTGTTGTGTTTGTGGAAATGAATGCTCATGACAACGATCTAATGTTGACTTGTTCATCTTGAGACTTCTCTCAATAATTGTGAAACCGTTAAGGCTTGTTTAATAACAATTTGGTTTTTAGTTTTTGATTGTTTGAAAATTAAGTTTATAAACACTAATTCAACTCATAAGTTTATATGTTTTGTTATCCACTTTCAAAACTAAAAAATTAAGTCTCATTTGATTACCATTTGATTTTTTGTTTTTGAATTTGGAAATTAAAATTATGAACATTAGTTCCACATATTGATTTCTTTATTTTATTATCTATTTTTTAAGAGTGTTTTTAAAGATGAAGCCAAGATTTAAAAACTAAAATAAGTAGTTTTTAAAAACTTGTTTTTGGAATTTGAAATTTGGAATTTGACTAGGAATTTAAGTGTTTAGTTAGGAAAGATGAAAACTAATTGAAATTGGGGAAGGAATAAATTTCAAAAACTAAAAACTAAAAATAAAATTGTTATCAAATGGCGCCTAAGGAATCAAACCAAGTTCAAACTTCAGTTCCAATTGCTTCACTGAAGAATATATTTTTCTTTTCTTATTACTGAAAAGGCTTTGATTCTGCCTAAATTCAATAAAAATATCCACCTTTAGCGAACTGAATGTTAAAAAGTAAAATGTTCAAATATCTGCATCTTCATTTTGTTCTGGTCTCTGCCATTCCATCTGAGTTTGCTCTCTCTGTGCTTATATTTTCTTATTGCAGATTGTTTATTGGTTTGTTTTGCCAAAACTGATCAGAGAAGAGAGAATAAAACTTATAATGACAGTTATCTTATTAATGTTCTTGTTCCAATTCCTCCCAAAAGTTTACCACTCCATTATTTTAATGAGAAGAATGCAGAAGGTCACTGGATACATCTTTGGCACCATTTGGTGGGGTTTTGGCCTCAATCTCATTGCCTATTTCATTGCTTCTCATGTAAGCCTGCTTTTTATTTTTCATCATAGCCAGGTCTTTTAACTTTGTTTTTGTCTTTGATCCTGAATCTGTTTTCCTGCTAACAGGTTGCTGGGGGTTGCTGGTATGTTCTTGCAATACAGCGAGTTGCTTCTTGCATCCAGCAACATTGTGAGAGAAACAAGTGCAACCTATCTCTGTCATGCTCTGAGGAGGTGTGTTATCAGTTTATCTCATCAGCTACAACAATTGGAAGTTCGTGTGGTCGCAATTCGACTGCTACATTTAGGAAGCCGCTATGCTTGGATGTTAAAGGTCCATTCGCCTATGGCATCTACAAGTGGGCTCTTCCAGTCATTTCCAGCAATTCAGTTGCGGTCAAAGTCCTTTATCCCATCTTTTGGGGATTAATGACTCTCAGGTAATTAAGCAAGGAAACAAAATACTTTTCAAACTCTGTTTCTTCGGCTCCTGTGGAGAAGATTCAAGAGATTTCTGCACTATGTTTCTTGATAAATGATGCTTTAAATGTTGCAGTACCTTTGGCAATGATCTCGAGCCTACAAGTAATTGGCTGGAAGTATGCTTCAGTATTTGCACGGTGCTCAGTGGACTGCTGCTTTTCACTCTTTTGATTGGTAATATCCAGGTGAGTTTTTTCTGGTTCAATATGTAAATGTAGCTAAAAGATTTCTTCTGTTGACAACAACTCCTCATTTCTTCAAAAAACAAAAAAAGGTACTTTTGCACGCTGTCATGGCAAGAAGGCGGAAAATGCAGCTGAGATGTCGAGATTTGGAGTGGTGGATGAGGAGACGACAATTGCCGTCTCGTTTGAGACAACGAGTTCGACACTACGAACACCAGAGATGGGCAGCCATGGGCGGAGAAGATGA

mRNA sequence

TGACAATAACCCTGTTTTCGTAATAGGATTATCGCGGTGACAAAATATGAAGGCCCACAGCCCCCACCACAGAACCGCCTCCCCCTGCTCCCTCTTCCCTTACCTTGCGTGATCATTCCTAAACCTCTACTTCACAAATCAACTTGATTCCATCTCATCTTCTTCTCCACCACTCTCATGTCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTAATCCTTTCCCTCCACTCTCTCCCATGGTGGTTTCCCCCACTTTCTCTCCATGCCTTCTTTCCTCTCACCTTCTTCCATGTGGAGCGAGCTTTGCCTGAGGCCAACACCGCCTCCACTCAATGCCCCCGATGAAACCCCCGTCGAATGCTACGCCTGCACTCAAGTCGGCGTTCCAGCCTTCCACTCCACCAGCTGCGACCACGCCCACCAGCAACCCGAATGGGAAGCCTCCGCCGGTTCTTCCCTCGTCCCCATTCAGCCTACCAAACCCTCCCCATCTCGCCGCCCCGCACTGCGACATCCTTCCGGTTGCTTCGGCACCGTTCTCGACCCTAGAACCAAGCCGGTCCAGAGATGGAACCGGGTTCTCTTATTGGCTCGTGGAATGGCTCTCGCTGTTGATCCTCTCTACTTCTACGCACTGTCTATTGGAAGAGGAGGCTCCCCCTGCCTCTACATGGACGGTGGGTTGGCCGCCGTTGTCACCGTCCTCCGCACGTGCCTCGATTTCGTGCACTTGTGGCACGTTTGGCTTCAATTCCGCCTCGCCTACGTGTCCAGAGAGAGTATGGTGATTGGCTGCGGGAAACTCGTGTGGGACGCACGTGCTATCGCCTCTCATTACGTTCGTTCCTTCAAAGGCTTCTGGTTTGATGCCTTCGTTATCCTCCCCGTTCCTCAGATTGTTTATTGGTTTGTTTTGCCAAAACTGATCAGAGAAGAGAGAATAAAACTTATAATGACAGTTATCTTATTAATGTTCTTGTTCCAATTCCTCCCAAAAGTTTACCACTCCATTATTTTAATGAGAAGAATGCAGAAGGTCACTGGATACATCTTTGGCACCATTTGGTGGGGTTTTGGCCTCAATCTCATTGCCTATTTCATTGCTTCTCATGTTGCTGGGGGTTGCTGGTATGTTCTTGCAATACAGCGAGTTGCTTCTTGCATCCAGCAACATTGTGAGAGAAACAAGTGCAACCTATCTCTGTCATGCTCTGAGGAGGTGTGTTATCAGTTTATCTCATCAGCTACAACAATTGGAAGTTCGTGTGGTCGCAATTCGACTGCTACATTTAGGAAGCCGCTATGCTTGGATGTTAAAGGTCCATTCGCCTATGGCATCTACAAGTGGGCTCTTCCAGTCATTTCCAGCAATTCAGTTGCGGTCAAAGTCCTTTATCCCATCTTTTGGGGATTAATGACTCTCAGTACCTTTGGCAATGATCTCGAGCCTACAAGTAATTGGCTGGAAGTATGCTTCAGTATTTGCACGGTGCTCAGTGGACTGCTGCTTTTCACTCTTTTGATTGGTACTTTTGCACGCTGTCATGGCAAGAAGGCGGAAAATGCAGCTGAGATGTCGAGATTTGGAGTGGTGGATGAGGAGACGACAATTGCCGTCTCGTTTGAGACAACGAGTTCGACACTACGAACACCAGAGATGGGCAGCCATGGGCGGAGAAGATGA

Coding sequence (CDS)

ATGCCTTCTTTCCTCTCACCTTCTTCCATGTGGAGCGAGCTTTGCCTGAGGCCAACACCGCCTCCACTCAATGCCCCCGATGAAACCCCCGTCGAATGCTACGCCTGCACTCAAGTCGGCGTTCCAGCCTTCCACTCCACCAGCTGCGACCACGCCCACCAGCAACCCGAATGGGAAGCCTCCGCCGGTTCTTCCCTCGTCCCCATTCAGCCTACCAAACCCTCCCCATCTCGCCGCCCCGCACTGCGACATCCTTCCGGTTGCTTCGGCACCGTTCTCGACCCTAGAACCAAGCCGGTCCAGAGATGGAACCGGGTTCTCTTATTGGCTCGTGGAATGGCTCTCGCTGTTGATCCTCTCTACTTCTACGCACTGTCTATTGGAAGAGGAGGCTCCCCCTGCCTCTACATGGACGGTGGGTTGGCCGCCGTTGTCACCGTCCTCCGCACGTGCCTCGATTTCGTGCACTTGTGGCACGTTTGGCTTCAATTCCGCCTCGCCTACGTGTCCAGAGAGAGTATGGTGATTGGCTGCGGGAAACTCGTGTGGGACGCACGTGCTATCGCCTCTCATTACGTTCGTTCCTTCAAAGGCTTCTGGTTTGATGCCTTCGTTATCCTCCCCGTTCCTCAGATTGTTTATTGGTTTGTTTTGCCAAAACTGATCAGAGAAGAGAGAATAAAACTTATAATGACAGTTATCTTATTAATGTTCTTGTTCCAATTCCTCCCAAAAGTTTACCACTCCATTATTTTAATGAGAAGAATGCAGAAGGTCACTGGATACATCTTTGGCACCATTTGGTGGGGTTTTGGCCTCAATCTCATTGCCTATTTCATTGCTTCTCATGTTGCTGGGGGTTGCTGGTATGTTCTTGCAATACAGCGAGTTGCTTCTTGCATCCAGCAACATTGTGAGAGAAACAAGTGCAACCTATCTCTGTCATGCTCTGAGGAGGTGTGTTATCAGTTTATCTCATCAGCTACAACAATTGGAAGTTCGTGTGGTCGCAATTCGACTGCTACATTTAGGAAGCCGCTATGCTTGGATGTTAAAGGTCCATTCGCCTATGGCATCTACAAGTGGGCTCTTCCAGTCATTTCCAGCAATTCAGTTGCGGTCAAAGTCCTTTATCCCATCTTTTGGGGATTAATGACTCTCAGTACCTTTGGCAATGATCTCGAGCCTACAAGTAATTGGCTGGAAGTATGCTTCAGTATTTGCACGGTGCTCAGTGGACTGCTGCTTTTCACTCTTTTGATTGGTACTTTTGCACGCTGTCATGGCAAGAAGGCGGAAAATGCAGCTGAGATGTCGAGATTTGGAGTGGTGGATGAGGAGACGACAATTGCCGTCTCGTTTGAGACAACGAGTTCGACACTACGAACACCAGAGATGGGCAGCCATGGGCGGAGAAGATGA

Protein sequence

MPSFLSPSSMWSELCLRPTPPPLNAPDETPVECYACTQVGVPAFHSTSCDHAHQQPEWEASAGSSLVPIQPTKPSPSRRPALRHPSGCFGTVLDPRTKPVQRWNRVLLLARGMALAVDPLYFYALSIGRGGSPCLYMDGGLAAVVTVLRTCLDFVHLWHVWLQFRLAYVSRESMVIGCGKLVWDARAIASHYVRSFKGFWFDAFVILPVPQIVYWFVLPKLIREERIKLIMTVILLMFLFQFLPKVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCERNKCNLSLSCSEEVCYQFISSATTIGSSCGRNSTATFRKPLCLDVKGPFAYGIYKWALPVISSNSVAVKVLYPIFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIGTFARCHGKKAENAAEMSRFGVVDEETTIAVSFETTSSTLRTPEMGSHGRRR
Homology
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BLAST of Lsi03G001560 vs. Swiss-Prot
Match: CNGC2_ARATH (Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana GN=CNGC2 PE=1 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 1.7e-177
Identity = 313/403 (77.67%), Postives = 335/403 (83.13%), Query Frame = 1 

Query: 27  DETPV----ECYACTQVGVPAFHSTSCDHAHQQPEWEASAGSSLVPIQPTKPSPSRRPAL 86
           DETPV    ECYACTQVGVPAFHSTSCD AH  PEW ASAGSSLVPIQ        R   
Sbjct: 45  DETPVLSSVECYACTQVGVPAFHSTSCDQAHA-PEWRASAGSSLVPIQEGSVPNPARTRF 104

Query: 87  RHPSGCFGTVLDPRTKPVQRWNRVLLLARGMALAVDPLYFYALSIGRGGSP-CLYMDGGL 146
           R   G FG VLDPR+K VQRWNR LLLARGMALAVDPL+FYALSIGR   P CLYMDG  
Sbjct: 105 RRLKGPFGEVLDPRSKRVQRWNRALLLARGMALAVDPLFFYALSIGRTTGPACLYMDGAF 164

Query: 147 AAVVTVLRTCLDFVHLWHVWLQFRLAYVSRESMVIGCGKLVWDARAIASHYVRSFKGFWF 206
           AAVVTVLRTCLD VHLWHVWLQFRLAYVSRES+V+GCGKLVWD RAIASHY RS  GFWF
Sbjct: 165 AAVVTVLRTCLDAVHLWHVWLQFRLAYVSRESLVVGCGKLVWDPRAIASHYARSLTGFWF 224

Query: 207 DAFVILPVPQIVYWFVLPKLIREERIKLIMTVILLMFLFQFLPKVYHSIILMRRMQKVTG 266
           D  VILPVPQ V+W V+PKLIREE++KLIMT++LL+FLFQFLPK+YH I LMRRMQKVTG
Sbjct: 225 DVIVILPVPQAVFWLVVPKLIREEKVKLIMTILLLIFLFQFLPKIYHCICLMRRMQKVTG 284

Query: 267 YIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCER-NKCNLSLSCSEEV 326
           YIFGTIWWGF LNLIAYFIASHVAGGCWYVLAIQRVASCI+Q C R   CNLSL+C EEV
Sbjct: 285 YIFGTIWWGFALNLIAYFIASHVAGGCWYVLAIQRVASCIRQQCMRTGNCNLSLACKEEV 344

Query: 327 CYQFISSATTIGSSC-GRNSTATFRKPLCLDVKGPFAYGIYKWALPVISSNSVAVKVLYP 386
           CYQF+S  +T+G  C   N T+   KP+CLD  GPF YGIY+WALPVISSNS+AVK+LYP
Sbjct: 345 CYQFVSPTSTVGYPCLSGNLTSVVNKPMCLDSNGPFRYGIYRWALPVISSNSLAVKILYP 404

Query: 387 IFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG 423
           IFWGLMTLSTF NDLEPTSNWLEV FSI  VLSGLLLFTLLIG
Sbjct: 405 IFWGLMTLSTFANDLEPTSNWLEVIFSIVMVLSGLLLFTLLIG 446

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BLAST of Lsi03G001560 vs. Swiss-Prot
Match: CNGC4_ARATH (Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana GN=CNGC4 PE=2 SV=2)

HSP 1 Score: 294.7 bits (753), Expect = 1.8e-78
Identity = 159/342 (46.49%), Postives = 220/342 (64.33%), Query Frame = 1 

Query: 90  GTVLDPRTKPVQRWNRVLLLARGMALAVDPLYFYALSIGRGGSPCLYMDGGLAAVVTVLR 149
           G +LDPR+K V+ WN+V LL     L VDPL+ Y LS+      CL +DG LA  VT LR
Sbjct: 77  GRILDPRSKWVREWNKVFLLVCATGLFVDPLFLYTLSVS-DTCMCLLVDGWLALTVTALR 136

Query: 150 TCLDFVHLWHVWLQFRLA----YVSRESMV-IGCGKLVWDARAIASHYVRSFKGFWFDAF 209
           +  D +HLW++W+QF++A    Y   +S      G     +  +A  YV+   GF+FD F
Sbjct: 137 SMTDLLHLWNIWIQFKIARRWPYPGGDSDGDTNKGGGTRGSTRVAPPYVKK-NGFFFDLF 196

Query: 210 VILPVPQIVYWFVLPKLIREERIKLIMTVILLMFLFQFLPKVYHSIILMRRMQKVTGYIF 269
           VILP+PQ+V W V+P L++   + L+++V+L+ FLFQ+LPK+YHSI  +RR   ++GYIF
Sbjct: 197 VILPLPQVVLWVVIPSLLKRGSVTLVVSVLLVTFLFQYLPKIYHSIRHLRRNATLSGYIF 256

Query: 270 GTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCERN-KCNL-SLSCSEEVCY 329
           GT+WWG  LN+IAYF+A+H AG CWY+L +QR A C+++ CE    C+L  LSC E V Y
Sbjct: 257 GTVWWGIALNMIAYFVAAHAAGACWYLLGVQRSAKCLKEQCENTIGCDLRMLSCKEPVYY 316

Query: 330 QFISSATTIGSSCGRNSTATFR--KPLCLDVKGPFAYGIYKWALPVISSNSVAVKVLYPI 389
                 T +     R + A     + +CLD+   + YG Y+W + ++SS S   K+L+PI
Sbjct: 317 ----GTTVMVLDRARLAWAQNHQARSVCLDINTNYTYGAYQWTIQLVSSESRLEKILFPI 376

Query: 390 FWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG 423
           FWGLMTLSTFGN LE T+ W EV F+I  + SGLLL T+LIG
Sbjct: 377 FWGLMTLSTFGN-LESTTEWSEVVFNIIVLTSGLLLVTMLIG 411

[Close]
BLAST of Lsi03G001560 vs. Swiss-Prot
Match: CNG18_ARATH (Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana GN=CNGC18 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.1e-45
Identity = 119/341 (34.90%), Postives = 178/341 (52.20%), Query Frame = 1 

Query: 92  VLDPRTKPVQRWNRVLLLARGMALAVDPLYFYALSIGRGGSPCLYMDGGLAAVVTVLRTC 151
           +LDP +  V  WN V L+   +AL +DP YFY   +G  G  CL +D  LAA VT  RT 
Sbjct: 40  ILDPDSNIVTYWNHVFLITSILALFLDPFYFYVPYVG--GPACLSIDISLAATVTFFRTV 99

Query: 152 LDFVHLWHVWLQFRLAYVSRESMVIGCGKLVWDARAIASHYVRSFKGFWFDAFVILPVPQ 211
            D  HL H++++FR A+V+R S V G G+LV D+R IA  Y+++   F  D   +LP+PQ
Sbjct: 100 ADIFHLLHIFMKFRTAFVARSSRVFGRGELVMDSREIAMRYLKT--DFLIDVAAMLPLPQ 159

Query: 212 IVYWFVLPKLIREERIKLIMTVILLMFLFQFLPKVYHSIILMRRMQKVTGYIFGTIWWGF 271
           +V W V+P            T+ L++ L Q++P+ +    L +R+ K TG+I  T W G 
Sbjct: 160 LVIWLVIPAATNGTANHANSTLALIV-LVQYIPRSFIIFPLNQRIIKTTGFIAKTAWAGA 219

Query: 272 GLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCERNKCNLSLSC---------SEEVCY 331
             NL+ Y +ASHV G  WY+ +I R  SC    C+++     L C          E+   
Sbjct: 220 AYNLLLYILASHVLGAMWYLSSIGRQFSCWSNVCKKDNALRVLDCLPSFLDCKSLEQPER 279

Query: 332 QFISSATTIGSSCGRNSTATFRKPLCLDVKGPFAYGIYKWALPV-ISSNSVAVKVLYPIF 391
           Q+  + T + S C   S+ T            F +G++  A    +++     K LY ++
Sbjct: 280 QYWQNVTQVLSHCDATSSTT-----------NFKFGMFAEAFTTQVATTDFVSKYLYCLW 339

Query: 392 WGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG 423
           WGL  LS++G ++  +    E  F I   + GL+LFTLLIG
Sbjct: 340 WGLRNLSSYGQNITTSVYLGETLFCITICIFGLILFTLLIG 364

[Close]
BLAST of Lsi03G001560 vs. Swiss-Prot
Match: CNG14_ARATH (Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana GN=CNGC14 PE=2 SV=2)

HSP 1 Score: 184.9 bits (468), Expect = 2.1e-45
Identity = 125/336 (37.20%), Postives = 182/336 (54.17%), Query Frame = 1 

Query: 92  VLDPRTKPVQRWNRVLLLARGMALAVDPLYFYALSIGR-GGSPCLYMDGGLAAVVTVLRT 151
           +LDP    V +WNRV L    +AL VDPL+F+  S+ R G S C+  D  L  V+T  RT
Sbjct: 72  ILDPGGDAVLQWNRVFLFWCLVALYVDPLFFFLSSVKRIGRSSCMTTDLKLGIVITFFRT 131

Query: 152 CLDFVHLWHVWLQFRLAYVSRESMVIGCGKLVWDARAIASHYVRSFKGFWFDAFVILPVP 211
             D  ++ H+ ++FR AYVSR S V G G+LV D + IA  Y+RS   F  D    LP+P
Sbjct: 132 LADLFYVLHIVIKFRTAYVSRTSRVFGRGELVKDPKLIARRYLRS--DFIVDLIACLPLP 191

Query: 212 QIVYWFVLPKLIREERIKLIMTVILLMFLFQFLPKVYHSIILMRRMQKVTGYIFGTIWWG 271
           QIV WF+LP  IR          ++L+ L Q++P++Y    L   + K TG +  T W G
Sbjct: 192 QIVSWFILPS-IRSSHSDHTTNALVLIVLVQYIPRLYLIFPLSAEIIKATGVVTTTAWAG 251

Query: 272 FGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCERNKCNLSLSCSEEVCYQFISSATT 331
              NL+ Y +ASH+ G  WY+L+I+R A+C +  C  +K ++ L C  +    F    T 
Sbjct: 252 AAYNLLQYMLASHILGSAWYLLSIERQATCWKAEC--HKESVPLQCVTD----FFDCGTL 311

Query: 332 IGSSCG--RNSTATFRKPLCLDVKG-PFAYGIYKWALPV-ISSNSVAVKVLYPIFWGLMT 391
                   +N+T  F    C       F +GI+  AL   + S+    K LY +++GL  
Sbjct: 312 HRDDRNNWQNTTVVFSN--CDPSNNIQFTFGIFADALTKNVVSSPFLEKYLYCLWFGLQN 371

Query: 392 LSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG 423
           LS++G +L  +++ LE  F+I   + GL+LF LLIG
Sbjct: 372 LSSYGQNLSTSTSVLETMFAILVAIFGLVLFALLIG 396

[Close]
BLAST of Lsi03G001560 vs. Swiss-Prot
Match: CNG20_ARATH (Probable cyclic nucleotide-gated ion channel 20, chloroplastic OS=Arabidopsis thaliana GN=CNGC20 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.1e-43
Identity = 107/344 (31.10%), Postives = 186/344 (54.07%), Query Frame = 1 

Query: 92  VLDPRTKPVQRWNRVLLLARGMALAVDPLYFYALSIGRGGSPCLYMDGGLAAVVTVLRTC 151
           +++P  K VQ W +   L+  +A+ +DPL+F+ + + +  + C+ +D  +      +R+ 
Sbjct: 192 IMNPHAKEVQTWTKFFALSCLLAIFIDPLFFFLIKV-QEQNKCIMIDWPMTKAFVAVRSV 251

Query: 152 LDFVHLWHVWLQFRLAYVSRESMVIGCGKLVWDARAIASHYVRSFKGFWFDAFVILPVPQ 211
            D +   ++ LQFRLAYV+RES V+G G+LV   + IA HY++    F+ D F+++P+PQ
Sbjct: 252 TDVIFTMNILLQFRLAYVARESTVVGAGQLVSHPKKIALHYLKG--KFFLDLFIVMPLPQ 311

Query: 212 IVYWFVLPKLIREERIKLIMTVILLMFLFQFLPKVYHSIILMRRMQKVTGYIFGTIWWGF 271
           I+  +++P  +          ++    LFQ++PK+Y  +  +   Q  TG+IF + W  F
Sbjct: 312 ILILWIIPAHLGASGANYAKNLLRAAVLFQYIPKLYRLLPFLAG-QTPTGFIFESAWANF 371

Query: 272 GLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCERNKC-NLSLSCSEEVCYQFISSATT 331
            +NL+ + +A HV G CWY+  +QRV  C+     RN C N    C + +     +S+  
Sbjct: 372 VINLLTFMLAGHVVGSCWYLFGLQRVNQCL-----RNACGNFGRECQDLIDCGNGNSSVL 431

Query: 332 IGSSCGRNSTATFRKPLCLDVKGPFAYGIYKWALPVISSNSVAVKVLYPIFWGLMTLSTF 391
           + ++   N++A      C    G F YGIY  A+ + + +++  +  Y +FWG   +ST 
Sbjct: 432 VRATWKDNASAN----ACFQEDG-FPYGIYLKAVNLTNHSNLFTRYSYSLFWGFQQISTL 491

Query: 392 GNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG---TFARCHGKK 432
             +  P+    EV F++  +  GLLLF LLIG    F +  GK+
Sbjct: 492 AGNQVPSYFLGEVFFTMGIIGLGLLLFALLIGNMQNFLQALGKR 521

[Close]
BLAST of Lsi03G001560 vs. TrEMBL
Match: A0A0A0KXJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G638350 PE=4 SV=1)

HSP 1 Score: 791.2 bits (2042), Expect = 7.0e-226
Identity = 393/419 (93.79%), Postives = 399/419 (95.23%), Query Frame = 1 

Query: 7   PSSMWSELCLRPTPPPLN-APDETPV-ECYACTQVGVPAFHSTSCDHAHQQPEWEASAGS 66
           PSSMWSELCLRP+PPPLN A D TPV ECYACTQVGVPAFHSTSCDHAHQQPEWEASAGS
Sbjct: 2   PSSMWSELCLRPSPPPLNVAADATPVLECYACTQVGVPAFHSTSCDHAHQQPEWEASAGS 61

Query: 67  SLVPIQPTKPSPSRRPALRHPS-GCFGTVLDPRTKPVQRWNRVLLLARGMALAVDPLYFY 126
           SLVPIQPTK SP    A RH S GCFGTVLDPR KPVQRWNRVLLLARGM+LAVDPLYFY
Sbjct: 62  SLVPIQPTKSSP----APRHSSAGCFGTVLDPRKKPVQRWNRVLLLARGMSLAVDPLYFY 121

Query: 127 ALSIGRGGSPCLYMDGGLAAVVTVLRTCLDFVHLWHVWLQFRLAYVSRESMVIGCGKLVW 186
           ALSIGRGG PCLYMDGGLAA VTV+RTCLD VHLWHVWLQFRLAYVS+ESMVIGCGKLVW
Sbjct: 122 ALSIGRGGWPCLYMDGGLAAGVTVVRTCLDIVHLWHVWLQFRLAYVSKESMVIGCGKLVW 181

Query: 187 DARAIASHYVRSFKGFWFDAFVILPVPQIVYWFVLPKLIREERIKLIMTVILLMFLFQFL 246
           DAR IASHYVRSFKGFWFDAFVILPVPQIVYW VLPKLIREERIKLIMTVILLMFLFQFL
Sbjct: 182 DARDIASHYVRSFKGFWFDAFVILPVPQIVYWLVLPKLIREERIKLIMTVILLMFLFQFL 241

Query: 247 PKVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQ 306
           PKVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQ
Sbjct: 242 PKVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQ 301

Query: 307 HCERNKCNLSLSCSEEVCYQFISSATTIGSSCGRNSTATFRKPLCLDVKGPFAYGIYKWA 366
           HCERNKCNLSLSCSEEVCYQF+SS TTIGSSCGRNSTATFRKPLCLDV GPFAYGIYKWA
Sbjct: 302 HCERNKCNLSLSCSEEVCYQFLSSDTTIGSSCGRNSTATFRKPLCLDVNGPFAYGIYKWA 361

Query: 367 LPVISSNSVAVKVLYPIFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG 423
           LPVISSNSVAVK+LYPIFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG
Sbjct: 362 LPVISSNSVAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG 416

[Close]
BLAST of Lsi03G001560 vs. TrEMBL
Match: A0A061EMN1_THECC (Cyclic nucleotide-regulated ion channel family protein isoform 1 OS=Theobroma cacao GN=TCM_018690 PE=4 SV=1)

HSP 1 Score: 663.7 bits (1711), Expect = 1.7e-187
Identity = 333/433 (76.91%), Postives = 365/433 (84.30%), Query Frame = 1 

Query: 2   PSFLSPSSMWSELCLRPTPPPLNA----------PDETPVECYACTQVGVPAFHSTSCDH 61
           PS LS  S W  LC     P  N+          P    VECYACTQVGVP FHSTSCDH
Sbjct: 4   PSNLS-LSRWIGLCQLQNSPGENSDHSGDISEDNPISNTVECYACTQVGVPVFHSTSCDH 63

Query: 62  AHQQPEWEASAGSSLVPIQP-TKPSPSRRPALRHPSGCFGTVLDPRTKPVQRWNRVLLLA 121
           AH QPEWEASAGSSLVPIQ       ++  A RHPSG  G VLDPR+K VQ+WNR  LLA
Sbjct: 64  AH-QPEWEASAGSSLVPIQARAGQKKTQAAASRHPSGPLGRVLDPRSKRVQKWNRAFLLA 123

Query: 122 RGMALAVDPLYFYALSIGRGGSPCLYMDGGLAAVVTVLRTCLDFVHLWHVWLQFRLAYVS 181
           RGMALA+DPL+FYALSIGRGG PCLYMDGGLAA+VT+LRTC+D VHL+H+WLQFRLAYVS
Sbjct: 124 RGMALAIDPLFFYALSIGRGGFPCLYMDGGLAAIVTILRTCVDAVHLFHLWLQFRLAYVS 183

Query: 182 RESMVIGCGKLVWDARAIASHYVRSFKGFWFDAFVILPVPQIVYWFVLPKLIREERIKLI 241
           RES+V+GCGKLVWDARAIASHYVRS KGFWFDAFVILPVPQ V+W V+PKLIREE+IKLI
Sbjct: 184 RESLVVGCGKLVWDARAIASHYVRSLKGFWFDAFVILPVPQAVFWLVVPKLIREEQIKLI 243

Query: 242 MTVILLMFLFQFLPKVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWY 301
           MT++LL+FLFQFLPKVYHSI LMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWY
Sbjct: 244 MTILLLIFLFQFLPKVYHSICLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWY 303

Query: 302 VLAIQRVASCIQQHCERN-KCNLSLSCSEEVCYQFISSATTIGSSCGRNSTATFRKPLCL 361
           VLAIQRVASC++Q CER+ +C LSLSCSEEVCYQF+  A  +G+ CG NST    KPLCL
Sbjct: 304 VLAIQRVASCLRQQCERSERCKLSLSCSEEVCYQFLFPAEAVGNPCGGNSTKVVGKPLCL 363

Query: 362 DVKGPFAYGIYKWALPVISSNSVAVKVLYPIFWGLMTLSTFGNDLEPTSNWLEVCFSICT 421
           DV GPF YGIY+WALPV+SSNSVAVK+LYPIFWGLMTLSTFGNDLEPTS+WLEV FSIC 
Sbjct: 364 DVHGPFNYGIYQWALPVVSSNSVAVKILYPIFWGLMTLSTFGNDLEPTSHWLEVMFSICI 423

Query: 422 VLSGLLLFTLLIG 423
           VL+GLLLFTLLIG
Sbjct: 424 VLAGLLLFTLLIG 434

[Close]
BLAST of Lsi03G001560 vs. TrEMBL
Match: A0A061EF03_THECC (Cyclic nucleotide-regulated ion channel family protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_018690 PE=4 SV=1)

HSP 1 Score: 662.5 bits (1708), Expect = 3.8e-187
Identity = 323/399 (80.95%), Postives = 354/399 (88.72%), Query Frame = 1 

Query: 26  PDETPVECYACTQVGVPAFHSTSCDHAHQQPEWEASAGSSLVPIQP-TKPSPSRRPALRH 85
           P    VECYACTQVGVP FHSTSCDHAH QPEWEASAGSSLVPIQ       ++  A RH
Sbjct: 17  PISNTVECYACTQVGVPVFHSTSCDHAH-QPEWEASAGSSLVPIQARAGQKKTQAAASRH 76

Query: 86  PSGCFGTVLDPRTKPVQRWNRVLLLARGMALAVDPLYFYALSIGRGGSPCLYMDGGLAAV 145
           PSG  G VLDPR+K VQ+WNR  LLARGMALA+DPL+FYALSIGRGG PCLYMDGGLAA+
Sbjct: 77  PSGPLGRVLDPRSKRVQKWNRAFLLARGMALAIDPLFFYALSIGRGGFPCLYMDGGLAAI 136

Query: 146 VTVLRTCLDFVHLWHVWLQFRLAYVSRESMVIGCGKLVWDARAIASHYVRSFKGFWFDAF 205
           VT+LRTC+D VHL+H+WLQFRLAYVSRES+V+GCGKLVWDARAIASHYVRS KGFWFDAF
Sbjct: 137 VTILRTCVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDARAIASHYVRSLKGFWFDAF 196

Query: 206 VILPVPQIVYWFVLPKLIREERIKLIMTVILLMFLFQFLPKVYHSIILMRRMQKVTGYIF 265
           VILPVPQ V+W V+PKLIREE+IKLIMT++LL+FLFQFLPKVYHSI LMRRMQKVTGYIF
Sbjct: 197 VILPVPQAVFWLVVPKLIREEQIKLIMTILLLIFLFQFLPKVYHSICLMRRMQKVTGYIF 256

Query: 266 GTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCERN-KCNLSLSCSEEVCYQ 325
           GTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASC++Q CER+ +C LSLSCSEEVCYQ
Sbjct: 257 GTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERSERCKLSLSCSEEVCYQ 316

Query: 326 FISSATTIGSSCGRNSTATFRKPLCLDVKGPFAYGIYKWALPVISSNSVAVKVLYPIFWG 385
           F+  A  +G+ CG NST    KPLCLDV GPF YGIY+WALPV+SSNSVAVK+LYPIFWG
Sbjct: 317 FLFPAEAVGNPCGGNSTKVVGKPLCLDVHGPFNYGIYQWALPVVSSNSVAVKILYPIFWG 376

Query: 386 LMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG 423
           LMTLSTFGNDLEPTS+WLEV FSIC VL+GLLLFTLLIG
Sbjct: 377 LMTLSTFGNDLEPTSHWLEVMFSICIVLAGLLLFTLLIG 414

[Close]
BLAST of Lsi03G001560 vs. TrEMBL
Match: M0ZM31_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001441 PE=4 SV=1)

HSP 1 Score: 658.7 bits (1698), Expect = 5.4e-186
Identity = 323/403 (80.15%), Postives = 353/403 (87.59%), Query Frame = 1 

Query: 24  NAPDETPVECYACTQVGVPAFHSTSCDHAHQQPEWEASAGSSLVPIQ---PTKPSPSRRP 83
           N P    +ECYACTQVGVP FHSTSCD A+Q PEWEASAGSSL+PIQ     K   SR  
Sbjct: 35  NNPISNSIECYACTQVGVPVFHSTSCDGANQ-PEWEASAGSSLIPIQNRTDLKTGKSRSS 94

Query: 84  ALRHPSGCFGTVLDPRTKPVQRWNRVLLLARGMALAVDPLYFYALSIGRGGSPCLYMDGG 143
             RH SG FG VLDPR+K VQRWNR++LLARGMALAVDPL+FYALSIGRGGSPCLYMDGG
Sbjct: 95  RSRHTSGPFGRVLDPRSKRVQRWNRMILLARGMALAVDPLFFYALSIGRGGSPCLYMDGG 154

Query: 144 LAAVVTVLRTCLDFVHLWHVWLQFRLAYVSRESMVIGCGKLVWDARAIASHYVRSFKGFW 203
           LAA+VTV+RT +D VHL+H+WLQFRLAYVSRES+V+GCGKLVWDARAIASHYVRS KGFW
Sbjct: 155 LAAIVTVIRTSVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDARAIASHYVRSLKGFW 214

Query: 204 FDAFVILPVPQIVYWFVLPKLIREERIKLIMTVILLMFLFQFLPKVYHSIILMRRMQKVT 263
           FDAFVILPVPQ V+W V+PKLIREE+IKLIMT++LLMFLFQFLPKVYH I LMRRMQKVT
Sbjct: 215 FDAFVILPVPQAVFWLVVPKLIREEQIKLIMTILLLMFLFQFLPKVYHCISLMRRMQKVT 274

Query: 264 GYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCERN-KCNLSLSCSEE 323
           GYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASC++Q CERN  CNLSLSCSEE
Sbjct: 275 GYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERNPSCNLSLSCSEE 334

Query: 324 VCYQFISSATTIGSSCGRNSTATFRKPLCLDVKGPFAYGIYKWALPVISSNSVAVKVLYP 383
           VCYQF+    T+G+ C  NST   RKP+CLDV GPF YGIY+WALPV+SS SV VK+LYP
Sbjct: 335 VCYQFLLPTGTVGNPCAGNSTTVTRKPMCLDVNGPFPYGIYQWALPVVSSRSVTVKILYP 394

Query: 384 IFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG 423
           IFWGLMTLSTFGNDLEPTS+WLEV FSIC VLSGL+LFTLLIG
Sbjct: 395 IFWGLMTLSTFGNDLEPTSHWLEVIFSICLVLSGLMLFTLLIG 436

[Close]
BLAST of Lsi03G001560 vs. TrEMBL
Match: K4BC11_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 655.2 bits (1689), Expect = 6.0e-185
Identity = 327/426 (76.76%), Postives = 360/426 (84.51%), Query Frame = 1 

Query: 9   SMWSELCLRPTPPPLNAPDE--------TPVECYACTQVGVPAFHSTSCDHAHQQPEWEA 68
           S W  +  R +  P N+ D           +ECYACTQVGVP FHSTSCD A+Q PEWEA
Sbjct: 12  SKWFGIFRRRSVQPDNSDDNDDDINPISNSIECYACTQVGVPVFHSTSCDGANQ-PEWEA 71

Query: 69  SAGSSLVPIQ---PTKPSPSRRPALRHPSGCFGTVLDPRTKPVQRWNRVLLLARGMALAV 128
           SAGSSLVPIQ    +K   SR    RH SG FG VLDPR+K VQRWNR++LLARGMALAV
Sbjct: 72  SAGSSLVPIQNRTDSKTGKSRSSRSRHTSGPFGRVLDPRSKRVQRWNRMILLARGMALAV 131

Query: 129 DPLYFYALSIGRGGSPCLYMDGGLAAVVTVLRTCLDFVHLWHVWLQFRLAYVSRESMVIG 188
           DPL+FYALSIGRGGSPCLYMDG LAA+VTV+RT +D VHL+H+WLQFRLAYVSRES+V+G
Sbjct: 132 DPLFFYALSIGRGGSPCLYMDGSLAAIVTVIRTSVDAVHLFHLWLQFRLAYVSRESLVVG 191

Query: 189 CGKLVWDARAIASHYVRSFKGFWFDAFVILPVPQIVYWFVLPKLIREERIKLIMTVILLM 248
           CGKLVWDARAIASHYVRS KGFWFDAFVILPVPQ V+W V+PKLIREE+IKLIMT++LLM
Sbjct: 192 CGKLVWDARAIASHYVRSLKGFWFDAFVILPVPQAVFWLVVPKLIREEQIKLIMTILLLM 251

Query: 249 FLFQFLPKVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRV 308
           FLFQFLPKVYH I LMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRV
Sbjct: 252 FLFQFLPKVYHCISLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRV 311

Query: 309 ASCIQQHCERN-KCNLSLSCSEEVCYQFISSATTIGSSCGRNSTATFRKPLCLDVKGPFA 368
           ASC++Q CERN  CNLSLSCSEEVCYQF+    T+G+ C  NST   RKP+CLDV GPF 
Sbjct: 312 ASCLRQQCERNPSCNLSLSCSEEVCYQFLLPTGTVGNPCAGNSTTVTRKPMCLDVNGPFP 371

Query: 369 YGIYKWALPVISSNSVAVKVLYPIFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLL 423
           YGIY+WALPV+SS SV VK+LYPIFWGLMTLSTFGNDLEPTS+WLEV FSIC VLSGL+L
Sbjct: 372 YGIYQWALPVVSSRSVTVKILYPIFWGLMTLSTFGNDLEPTSHWLEVIFSICLVLSGLML 431

[Close]
BLAST of Lsi03G001560 vs. TAIR10
Match: AT5G15410.1 (AT5G15410.1 Cyclic nucleotide-regulated ion channel family protein)

HSP 1 Score: 623.6 bits (1607), Expect = 9.8e-179
Identity = 313/403 (77.67%), Postives = 335/403 (83.13%), Query Frame = 1 

Query: 27  DETPV----ECYACTQVGVPAFHSTSCDHAHQQPEWEASAGSSLVPIQPTKPSPSRRPAL 86
           DETPV    ECYACTQVGVPAFHSTSCD AH  PEW ASAGSSLVPIQ        R   
Sbjct: 45  DETPVLSSVECYACTQVGVPAFHSTSCDQAHA-PEWRASAGSSLVPIQEGSVPNPARTRF 104

Query: 87  RHPSGCFGTVLDPRTKPVQRWNRVLLLARGMALAVDPLYFYALSIGRGGSP-CLYMDGGL 146
           R   G FG VLDPR+K VQRWNR LLLARGMALAVDPL+FYALSIGR   P CLYMDG  
Sbjct: 105 RRLKGPFGEVLDPRSKRVQRWNRALLLARGMALAVDPLFFYALSIGRTTGPACLYMDGAF 164

Query: 147 AAVVTVLRTCLDFVHLWHVWLQFRLAYVSRESMVIGCGKLVWDARAIASHYVRSFKGFWF 206
           AAVVTVLRTCLD VHLWHVWLQFRLAYVSRES+V+GCGKLVWD RAIASHY RS  GFWF
Sbjct: 165 AAVVTVLRTCLDAVHLWHVWLQFRLAYVSRESLVVGCGKLVWDPRAIASHYARSLTGFWF 224

Query: 207 DAFVILPVPQIVYWFVLPKLIREERIKLIMTVILLMFLFQFLPKVYHSIILMRRMQKVTG 266
           D  VILPVPQ V+W V+PKLIREE++KLIMT++LL+FLFQFLPK+YH I LMRRMQKVTG
Sbjct: 225 DVIVILPVPQAVFWLVVPKLIREEKVKLIMTILLLIFLFQFLPKIYHCICLMRRMQKVTG 284

Query: 267 YIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCER-NKCNLSLSCSEEV 326
           YIFGTIWWGF LNLIAYFIASHVAGGCWYVLAIQRVASCI+Q C R   CNLSL+C EEV
Sbjct: 285 YIFGTIWWGFALNLIAYFIASHVAGGCWYVLAIQRVASCIRQQCMRTGNCNLSLACKEEV 344

Query: 327 CYQFISSATTIGSSC-GRNSTATFRKPLCLDVKGPFAYGIYKWALPVISSNSVAVKVLYP 386
           CYQF+S  +T+G  C   N T+   KP+CLD  GPF YGIY+WALPVISSNS+AVK+LYP
Sbjct: 345 CYQFVSPTSTVGYPCLSGNLTSVVNKPMCLDSNGPFRYGIYRWALPVISSNSLAVKILYP 404

Query: 387 IFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG 423
           IFWGLMTLSTF NDLEPTSNWLEV FSI  VLSGLLLFTLLIG
Sbjct: 405 IFWGLMTLSTFANDLEPTSNWLEVIFSIVMVLSGLLLFTLLIG 446

[Close]
BLAST of Lsi03G001560 vs. TAIR10
Match: AT5G54250.1 (AT5G54250.1 cyclic nucleotide-gated cation channel 4)

HSP 1 Score: 294.7 bits (753), Expect = 1.0e-79
Identity = 159/342 (46.49%), Postives = 220/342 (64.33%), Query Frame = 1 

Query: 90  GTVLDPRTKPVQRWNRVLLLARGMALAVDPLYFYALSIGRGGSPCLYMDGGLAAVVTVLR 149
           G +LDPR+K V+ WN+V LL     L VDPL+ Y LS+      CL +DG LA  VT LR
Sbjct: 77  GRILDPRSKWVREWNKVFLLVCATGLFVDPLFLYTLSVS-DTCMCLLVDGWLALTVTALR 136

Query: 150 TCLDFVHLWHVWLQFRLA----YVSRESMV-IGCGKLVWDARAIASHYVRSFKGFWFDAF 209
           +  D +HLW++W+QF++A    Y   +S      G     +  +A  YV+   GF+FD F
Sbjct: 137 SMTDLLHLWNIWIQFKIARRWPYPGGDSDGDTNKGGGTRGSTRVAPPYVKK-NGFFFDLF 196

Query: 210 VILPVPQIVYWFVLPKLIREERIKLIMTVILLMFLFQFLPKVYHSIILMRRMQKVTGYIF 269
           VILP+PQ+V W V+P L++   + L+++V+L+ FLFQ+LPK+YHSI  +RR   ++GYIF
Sbjct: 197 VILPLPQVVLWVVIPSLLKRGSVTLVVSVLLVTFLFQYLPKIYHSIRHLRRNATLSGYIF 256

Query: 270 GTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCERN-KCNL-SLSCSEEVCY 329
           GT+WWG  LN+IAYF+A+H AG CWY+L +QR A C+++ CE    C+L  LSC E V Y
Sbjct: 257 GTVWWGIALNMIAYFVAAHAAGACWYLLGVQRSAKCLKEQCENTIGCDLRMLSCKEPVYY 316

Query: 330 QFISSATTIGSSCGRNSTATFR--KPLCLDVKGPFAYGIYKWALPVISSNSVAVKVLYPI 389
                 T +     R + A     + +CLD+   + YG Y+W + ++SS S   K+L+PI
Sbjct: 317 ----GTTVMVLDRARLAWAQNHQARSVCLDINTNYTYGAYQWTIQLVSSESRLEKILFPI 376

Query: 390 FWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG 423
           FWGLMTLSTFGN LE T+ W EV F+I  + SGLLL T+LIG
Sbjct: 377 FWGLMTLSTFGN-LESTTEWSEVVFNIIVLTSGLLLVTMLIG 411

[Close]
BLAST of Lsi03G001560 vs. TAIR10
Match: AT5G14870.1 (AT5G14870.1 cyclic nucleotide-gated channel 18)

HSP 1 Score: 184.9 bits (468), Expect = 1.2e-46
Identity = 119/341 (34.90%), Postives = 178/341 (52.20%), Query Frame = 1 

Query: 92  VLDPRTKPVQRWNRVLLLARGMALAVDPLYFYALSIGRGGSPCLYMDGGLAAVVTVLRTC 151
           +LDP +  V  WN V L+   +AL +DP YFY   +G  G  CL +D  LAA VT  RT 
Sbjct: 40  ILDPDSNIVTYWNHVFLITSILALFLDPFYFYVPYVG--GPACLSIDISLAATVTFFRTV 99

Query: 152 LDFVHLWHVWLQFRLAYVSRESMVIGCGKLVWDARAIASHYVRSFKGFWFDAFVILPVPQ 211
            D  HL H++++FR A+V+R S V G G+LV D+R IA  Y+++   F  D   +LP+PQ
Sbjct: 100 ADIFHLLHIFMKFRTAFVARSSRVFGRGELVMDSREIAMRYLKT--DFLIDVAAMLPLPQ 159

Query: 212 IVYWFVLPKLIREERIKLIMTVILLMFLFQFLPKVYHSIILMRRMQKVTGYIFGTIWWGF 271
           +V W V+P            T+ L++ L Q++P+ +    L +R+ K TG+I  T W G 
Sbjct: 160 LVIWLVIPAATNGTANHANSTLALIV-LVQYIPRSFIIFPLNQRIIKTTGFIAKTAWAGA 219

Query: 272 GLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCERNKCNLSLSC---------SEEVCY 331
             NL+ Y +ASHV G  WY+ +I R  SC    C+++     L C          E+   
Sbjct: 220 AYNLLLYILASHVLGAMWYLSSIGRQFSCWSNVCKKDNALRVLDCLPSFLDCKSLEQPER 279

Query: 332 QFISSATTIGSSCGRNSTATFRKPLCLDVKGPFAYGIYKWALPV-ISSNSVAVKVLYPIF 391
           Q+  + T + S C   S+ T            F +G++  A    +++     K LY ++
Sbjct: 280 QYWQNVTQVLSHCDATSSTT-----------NFKFGMFAEAFTTQVATTDFVSKYLYCLW 339

Query: 392 WGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG 423
           WGL  LS++G ++  +    E  F I   + GL+LFTLLIG
Sbjct: 340 WGLRNLSSYGQNITTSVYLGETLFCITICIFGLILFTLLIG 364

[Close]
BLAST of Lsi03G001560 vs. TAIR10
Match: AT2G24610.1 (AT2G24610.1 cyclic nucleotide-gated channel 14)

HSP 1 Score: 184.9 bits (468), Expect = 1.2e-46
Identity = 125/336 (37.20%), Postives = 182/336 (54.17%), Query Frame = 1 

Query: 92  VLDPRTKPVQRWNRVLLLARGMALAVDPLYFYALSIGR-GGSPCLYMDGGLAAVVTVLRT 151
           +LDP    V +WNRV L    +AL VDPL+F+  S+ R G S C+  D  L  V+T  RT
Sbjct: 72  ILDPGGDAVLQWNRVFLFWCLVALYVDPLFFFLSSVKRIGRSSCMTTDLKLGIVITFFRT 131

Query: 152 CLDFVHLWHVWLQFRLAYVSRESMVIGCGKLVWDARAIASHYVRSFKGFWFDAFVILPVP 211
             D  ++ H+ ++FR AYVSR S V G G+LV D + IA  Y+RS   F  D    LP+P
Sbjct: 132 LADLFYVLHIVIKFRTAYVSRTSRVFGRGELVKDPKLIARRYLRS--DFIVDLIACLPLP 191

Query: 212 QIVYWFVLPKLIREERIKLIMTVILLMFLFQFLPKVYHSIILMRRMQKVTGYIFGTIWWG 271
           QIV WF+LP  IR          ++L+ L Q++P++Y    L   + K TG +  T W G
Sbjct: 192 QIVSWFILPS-IRSSHSDHTTNALVLIVLVQYIPRLYLIFPLSAEIIKATGVVTTTAWAG 251

Query: 272 FGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCERNKCNLSLSCSEEVCYQFISSATT 331
              NL+ Y +ASH+ G  WY+L+I+R A+C +  C  +K ++ L C  +    F    T 
Sbjct: 252 AAYNLLQYMLASHILGSAWYLLSIERQATCWKAEC--HKESVPLQCVTD----FFDCGTL 311

Query: 332 IGSSCG--RNSTATFRKPLCLDVKG-PFAYGIYKWALPV-ISSNSVAVKVLYPIFWGLMT 391
                   +N+T  F    C       F +GI+  AL   + S+    K LY +++GL  
Sbjct: 312 HRDDRNNWQNTTVVFSN--CDPSNNIQFTFGIFADALTKNVVSSPFLEKYLYCLWFGLQN 371

Query: 392 LSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG 423
           LS++G +L  +++ LE  F+I   + GL+LF LLIG
Sbjct: 372 LSSYGQNLSTSTSVLETMFAILVAIFGLVLFALLIG 396

[Close]
BLAST of Lsi03G001560 vs. TAIR10
Match: AT3G17700.1 (AT3G17700.1 cyclic nucleotide-binding transporter 1)

HSP 1 Score: 179.1 bits (453), Expect = 6.4e-45
Identity = 107/344 (31.10%), Postives = 186/344 (54.07%), Query Frame = 1 

Query: 92  VLDPRTKPVQRWNRVLLLARGMALAVDPLYFYALSIGRGGSPCLYMDGGLAAVVTVLRTC 151
           +++P  K VQ W +   L+  +A+ +DPL+F+ + + +  + C+ +D  +      +R+ 
Sbjct: 192 IMNPHAKEVQTWTKFFALSCLLAIFIDPLFFFLIKV-QEQNKCIMIDWPMTKAFVAVRSV 251

Query: 152 LDFVHLWHVWLQFRLAYVSRESMVIGCGKLVWDARAIASHYVRSFKGFWFDAFVILPVPQ 211
            D +   ++ LQFRLAYV+RES V+G G+LV   + IA HY++    F+ D F+++P+PQ
Sbjct: 252 TDVIFTMNILLQFRLAYVARESTVVGAGQLVSHPKKIALHYLKG--KFFLDLFIVMPLPQ 311

Query: 212 IVYWFVLPKLIREERIKLIMTVILLMFLFQFLPKVYHSIILMRRMQKVTGYIFGTIWWGF 271
           I+  +++P  +          ++    LFQ++PK+Y  +  +   Q  TG+IF + W  F
Sbjct: 312 ILILWIIPAHLGASGANYAKNLLRAAVLFQYIPKLYRLLPFLAG-QTPTGFIFESAWANF 371

Query: 272 GLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCERNKC-NLSLSCSEEVCYQFISSATT 331
            +NL+ + +A HV G CWY+  +QRV  C+     RN C N    C + +     +S+  
Sbjct: 372 VINLLTFMLAGHVVGSCWYLFGLQRVNQCL-----RNACGNFGRECQDLIDCGNGNSSVL 431

Query: 332 IGSSCGRNSTATFRKPLCLDVKGPFAYGIYKWALPVISSNSVAVKVLYPIFWGLMTLSTF 391
           + ++   N++A      C    G F YGIY  A+ + + +++  +  Y +FWG   +ST 
Sbjct: 432 VRATWKDNASAN----ACFQEDG-FPYGIYLKAVNLTNHSNLFTRYSYSLFWGFQQISTL 491

Query: 392 GNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG---TFARCHGKK 432
             +  P+    EV F++  +  GLLLF LLIG    F +  GK+
Sbjct: 492 AGNQVPSYFLGEVFFTMGIIGLGLLLFALLIGNMQNFLQALGKR 521

[Close]
BLAST of Lsi03G001560 vs. NCBI nr
Match: gi|778707371|ref|XP_004141458.2| (PREDICTED: cyclic nucleotide-gated ion channel 2 [Cucumis sativus])

HSP 1 Score: 791.2 bits (2042), Expect = 1.0e-225
Identity = 393/419 (93.79%), Postives = 399/419 (95.23%), Query Frame = 1 

Query: 7   PSSMWSELCLRPTPPPLN-APDETPV-ECYACTQVGVPAFHSTSCDHAHQQPEWEASAGS 66
           PSSMWSELCLRP+PPPLN A D TPV ECYACTQVGVPAFHSTSCDHAHQQPEWEASAGS
Sbjct: 2   PSSMWSELCLRPSPPPLNVAADATPVLECYACTQVGVPAFHSTSCDHAHQQPEWEASAGS 61

Query: 67  SLVPIQPTKPSPSRRPALRHPS-GCFGTVLDPRTKPVQRWNRVLLLARGMALAVDPLYFY 126
           SLVPIQPTK SP    A RH S GCFGTVLDPR KPVQRWNRVLLLARGM+LAVDPLYFY
Sbjct: 62  SLVPIQPTKSSP----APRHSSAGCFGTVLDPRKKPVQRWNRVLLLARGMSLAVDPLYFY 121

Query: 127 ALSIGRGGSPCLYMDGGLAAVVTVLRTCLDFVHLWHVWLQFRLAYVSRESMVIGCGKLVW 186
           ALSIGRGG PCLYMDGGLAA VTV+RTCLD VHLWHVWLQFRLAYVS+ESMVIGCGKLVW
Sbjct: 122 ALSIGRGGWPCLYMDGGLAAGVTVVRTCLDIVHLWHVWLQFRLAYVSKESMVIGCGKLVW 181

Query: 187 DARAIASHYVRSFKGFWFDAFVILPVPQIVYWFVLPKLIREERIKLIMTVILLMFLFQFL 246
           DAR IASHYVRSFKGFWFDAFVILPVPQIVYW VLPKLIREERIKLIMTVILLMFLFQFL
Sbjct: 182 DARDIASHYVRSFKGFWFDAFVILPVPQIVYWLVLPKLIREERIKLIMTVILLMFLFQFL 241

Query: 247 PKVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQ 306
           PKVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQ
Sbjct: 242 PKVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQ 301

Query: 307 HCERNKCNLSLSCSEEVCYQFISSATTIGSSCGRNSTATFRKPLCLDVKGPFAYGIYKWA 366
           HCERNKCNLSLSCSEEVCYQF+SS TTIGSSCGRNSTATFRKPLCLDV GPFAYGIYKWA
Sbjct: 302 HCERNKCNLSLSCSEEVCYQFLSSDTTIGSSCGRNSTATFRKPLCLDVNGPFAYGIYKWA 361

Query: 367 LPVISSNSVAVKVLYPIFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG 423
           LPVISSNSVAVK+LYPIFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG
Sbjct: 362 LPVISSNSVAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG 416

[Close]
BLAST of Lsi03G001560 vs. NCBI nr
Match: gi|659118887|ref|XP_008459361.1| (PREDICTED: cyclic nucleotide-gated ion channel 2 [Cucumis melo])

HSP 1 Score: 784.3 bits (2024), Expect = 1.2e-223
Identity = 386/418 (92.34%), Postives = 395/418 (94.50%), Query Frame = 1 

Query: 7   PSSMWSELCLRPTPPPLN-APDETPV-ECYACTQVGVPAFHSTSCDHAHQQPEWEASAGS 66
           PSSMWSELCLRP+PPPLN A D TPV ECYACTQVGVPAFHSTSCDHAHQQPEWEASAGS
Sbjct: 2   PSSMWSELCLRPSPPPLNVAADATPVVECYACTQVGVPAFHSTSCDHAHQQPEWEASAGS 61

Query: 67  SLVPIQPTKPSPSRRPALRHPSGCFGTVLDPRTKPVQRWNRVLLLARGMALAVDPLYFYA 126
           SLVPIQPTK SP   P     +GCFGTVLDPR KPVQRWNRVLLLARGMALAVDPLYFYA
Sbjct: 62  SLVPIQPTKSSP---PPRHSSAGCFGTVLDPRKKPVQRWNRVLLLARGMALAVDPLYFYA 121

Query: 127 LSIGRGGSPCLYMDGGLAAVVTVLRTCLDFVHLWHVWLQFRLAYVSRESMVIGCGKLVWD 186
           LSIGRGG PCLYMDGGLA  VTV+RTCLD VHLWHVWLQFRLAYVS+ESMVIGCGKLVW+
Sbjct: 122 LSIGRGGWPCLYMDGGLAGGVTVVRTCLDIVHLWHVWLQFRLAYVSKESMVIGCGKLVWN 181

Query: 187 ARAIASHYVRSFKGFWFDAFVILPVPQIVYWFVLPKLIREERIKLIMTVILLMFLFQFLP 246
           AR IASHYVRSFKGFWFDAFVILP+PQIVYW VLPKLIREERIKLIMTVILLMFLFQFLP
Sbjct: 182 ARDIASHYVRSFKGFWFDAFVILPIPQIVYWLVLPKLIREERIKLIMTVILLMFLFQFLP 241

Query: 247 KVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQH 306
           KVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQH
Sbjct: 242 KVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQH 301

Query: 307 CERNKCNLSLSCSEEVCYQFISSATTIGSSCGRNSTATFRKPLCLDVKGPFAYGIYKWAL 366
           CERN CNLSLSCSEEVCY+F+SS TTIGS CGRNSTATFRKPLCLDVKGPFAYGIYKWAL
Sbjct: 302 CERNNCNLSLSCSEEVCYRFLSSPTTIGSLCGRNSTATFRKPLCLDVKGPFAYGIYKWAL 361

Query: 367 PVISSNSVAVKVLYPIFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG 423
           PVISSNSVAVK+LYPIFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG
Sbjct: 362 PVISSNSVAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG 416

[Close]
BLAST of Lsi03G001560 vs. NCBI nr
Match: gi|590650478|ref|XP_007032653.1| (Cyclic nucleotide-regulated ion channel family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 663.7 bits (1711), Expect = 2.4e-187
Identity = 333/433 (76.91%), Postives = 365/433 (84.30%), Query Frame = 1 

Query: 2   PSFLSPSSMWSELCLRPTPPPLNA----------PDETPVECYACTQVGVPAFHSTSCDH 61
           PS LS  S W  LC     P  N+          P    VECYACTQVGVP FHSTSCDH
Sbjct: 4   PSNLS-LSRWIGLCQLQNSPGENSDHSGDISEDNPISNTVECYACTQVGVPVFHSTSCDH 63

Query: 62  AHQQPEWEASAGSSLVPIQP-TKPSPSRRPALRHPSGCFGTVLDPRTKPVQRWNRVLLLA 121
           AH QPEWEASAGSSLVPIQ       ++  A RHPSG  G VLDPR+K VQ+WNR  LLA
Sbjct: 64  AH-QPEWEASAGSSLVPIQARAGQKKTQAAASRHPSGPLGRVLDPRSKRVQKWNRAFLLA 123

Query: 122 RGMALAVDPLYFYALSIGRGGSPCLYMDGGLAAVVTVLRTCLDFVHLWHVWLQFRLAYVS 181
           RGMALA+DPL+FYALSIGRGG PCLYMDGGLAA+VT+LRTC+D VHL+H+WLQFRLAYVS
Sbjct: 124 RGMALAIDPLFFYALSIGRGGFPCLYMDGGLAAIVTILRTCVDAVHLFHLWLQFRLAYVS 183

Query: 182 RESMVIGCGKLVWDARAIASHYVRSFKGFWFDAFVILPVPQIVYWFVLPKLIREERIKLI 241
           RES+V+GCGKLVWDARAIASHYVRS KGFWFDAFVILPVPQ V+W V+PKLIREE+IKLI
Sbjct: 184 RESLVVGCGKLVWDARAIASHYVRSLKGFWFDAFVILPVPQAVFWLVVPKLIREEQIKLI 243

Query: 242 MTVILLMFLFQFLPKVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWY 301
           MT++LL+FLFQFLPKVYHSI LMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWY
Sbjct: 244 MTILLLIFLFQFLPKVYHSICLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWY 303

Query: 302 VLAIQRVASCIQQHCERN-KCNLSLSCSEEVCYQFISSATTIGSSCGRNSTATFRKPLCL 361
           VLAIQRVASC++Q CER+ +C LSLSCSEEVCYQF+  A  +G+ CG NST    KPLCL
Sbjct: 304 VLAIQRVASCLRQQCERSERCKLSLSCSEEVCYQFLFPAEAVGNPCGGNSTKVVGKPLCL 363

Query: 362 DVKGPFAYGIYKWALPVISSNSVAVKVLYPIFWGLMTLSTFGNDLEPTSNWLEVCFSICT 421
           DV GPF YGIY+WALPV+SSNSVAVK+LYPIFWGLMTLSTFGNDLEPTS+WLEV FSIC 
Sbjct: 364 DVHGPFNYGIYQWALPVVSSNSVAVKILYPIFWGLMTLSTFGNDLEPTSHWLEVMFSICI 423

Query: 422 VLSGLLLFTLLIG 423
           VL+GLLLFTLLIG
Sbjct: 424 VLAGLLLFTLLIG 434

[Close]
BLAST of Lsi03G001560 vs. NCBI nr
Match: gi|590650497|ref|XP_007032654.1| (Cyclic nucleotide-regulated ion channel family protein isoform 2, partial [Theobroma cacao])

HSP 1 Score: 662.5 bits (1708), Expect = 5.4e-187
Identity = 323/399 (80.95%), Postives = 354/399 (88.72%), Query Frame = 1 

Query: 26  PDETPVECYACTQVGVPAFHSTSCDHAHQQPEWEASAGSSLVPIQP-TKPSPSRRPALRH 85
           P    VECYACTQVGVP FHSTSCDHAH QPEWEASAGSSLVPIQ       ++  A RH
Sbjct: 17  PISNTVECYACTQVGVPVFHSTSCDHAH-QPEWEASAGSSLVPIQARAGQKKTQAAASRH 76

Query: 86  PSGCFGTVLDPRTKPVQRWNRVLLLARGMALAVDPLYFYALSIGRGGSPCLYMDGGLAAV 145
           PSG  G VLDPR+K VQ+WNR  LLARGMALA+DPL+FYALSIGRGG PCLYMDGGLAA+
Sbjct: 77  PSGPLGRVLDPRSKRVQKWNRAFLLARGMALAIDPLFFYALSIGRGGFPCLYMDGGLAAI 136

Query: 146 VTVLRTCLDFVHLWHVWLQFRLAYVSRESMVIGCGKLVWDARAIASHYVRSFKGFWFDAF 205
           VT+LRTC+D VHL+H+WLQFRLAYVSRES+V+GCGKLVWDARAIASHYVRS KGFWFDAF
Sbjct: 137 VTILRTCVDAVHLFHLWLQFRLAYVSRESLVVGCGKLVWDARAIASHYVRSLKGFWFDAF 196

Query: 206 VILPVPQIVYWFVLPKLIREERIKLIMTVILLMFLFQFLPKVYHSIILMRRMQKVTGYIF 265
           VILPVPQ V+W V+PKLIREE+IKLIMT++LL+FLFQFLPKVYHSI LMRRMQKVTGYIF
Sbjct: 197 VILPVPQAVFWLVVPKLIREEQIKLIMTILLLIFLFQFLPKVYHSICLMRRMQKVTGYIF 256

Query: 266 GTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCERN-KCNLSLSCSEEVCYQ 325
           GTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASC++Q CER+ +C LSLSCSEEVCYQ
Sbjct: 257 GTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERSERCKLSLSCSEEVCYQ 316

Query: 326 FISSATTIGSSCGRNSTATFRKPLCLDVKGPFAYGIYKWALPVISSNSVAVKVLYPIFWG 385
           F+  A  +G+ CG NST    KPLCLDV GPF YGIY+WALPV+SSNSVAVK+LYPIFWG
Sbjct: 317 FLFPAEAVGNPCGGNSTKVVGKPLCLDVHGPFNYGIYQWALPVVSSNSVAVKILYPIFWG 376

Query: 386 LMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIG 423
           LMTLSTFGNDLEPTS+WLEV FSIC VL+GLLLFTLLIG
Sbjct: 377 LMTLSTFGNDLEPTSHWLEVMFSICIVLAGLLLFTLLIG 414

[Close]
BLAST of Lsi03G001560 vs. NCBI nr
Match: gi|697161878|ref|XP_009589735.1| (PREDICTED: cyclic nucleotide-gated ion channel 2 [Nicotiana tomentosiformis])

HSP 1 Score: 662.1 bits (1707), Expect = 7.0e-187
Identity = 328/427 (76.81%), Postives = 362/427 (84.78%), Query Frame = 1 

Query: 9   SMWSELCLRPTPPPLNAPDE--------TPVECYACTQVGVPAFHSTSCDHAHQQPEWEA 68
           S W  +  R +  P N+ D           +ECYACTQVGVP FHSTSCD AHQ PEWEA
Sbjct: 12  SRWFGIFRRRSVQPDNSDDNDDDSNPISNSIECYACTQVGVPVFHSTSCDGAHQ-PEWEA 71

Query: 69  SAGSSLVPIQP----TKPSPSRRPALRHPSGCFGTVLDPRTKPVQRWNRVLLLARGMALA 128
           SAGSSLVPIQ     ++   SR    RH SG FG VLDPR+K VQRWNR++LLARGMALA
Sbjct: 72  SAGSSLVPIQNRTNNSRTGKSRSSRNRHQSGPFGRVLDPRSKRVQRWNRIILLARGMALA 131

Query: 129 VDPLYFYALSIGRGGSPCLYMDGGLAAVVTVLRTCLDFVHLWHVWLQFRLAYVSRESMVI 188
           VDPL+FYALSIGRGGSPCLYMDGGLAA+VTV+RTCLD VHL H+WLQFRLAYVSRES+V+
Sbjct: 132 VDPLFFYALSIGRGGSPCLYMDGGLAAIVTVIRTCLDAVHLLHLWLQFRLAYVSRESLVV 191

Query: 189 GCGKLVWDARAIASHYVRSFKGFWFDAFVILPVPQIVYWFVLPKLIREERIKLIMTVILL 248
           GCGKLVWDARAIA+HYVRS KGFWFDAFV+LPVPQ+V+W V+PKLIREE+IKLIMT++LL
Sbjct: 192 GCGKLVWDARAIAAHYVRSVKGFWFDAFVVLPVPQVVFWLVVPKLIREEQIKLIMTILLL 251

Query: 249 MFLFQFLPKVYHSIILMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQR 308
           MFLFQFLPKVYHSI LMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVL+IQR
Sbjct: 252 MFLFQFLPKVYHSISLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLSIQR 311

Query: 309 VASCIQQHCERN-KCNLSLSCSEEVCYQFISSATTIGSSCGRNSTATFRKPLCLDVKGPF 368
           VASC++Q CE+   CNLSLSCSEEVCYQF+    T+G+ C  NST   RKPLCLDV GPF
Sbjct: 312 VASCLRQQCEQKASCNLSLSCSEEVCYQFLLPTGTVGNPCAGNSTTVMRKPLCLDVNGPF 371

Query: 369 AYGIYKWALPVISSNSVAVKVLYPIFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLL 423
            YGIYKWALPV+SS SV VK+LYPIFWGLMTLSTFGNDLEPTS+WLEV FSIC VLSGL+
Sbjct: 372 PYGIYKWALPVVSSRSVTVKILYPIFWGLMTLSTFGNDLEPTSHWLEVIFSICLVLSGLM 431

The following BLAST results are available for this feature:
BLAST of Lsi03G001560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CNGC2_ARATH1.7e-17777.67Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana GN=CNGC2 PE=1 SV=1[more]
CNGC4_ARATH1.8e-7846.49Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana GN=CNGC4 PE=2 SV=2[more]
CNG18_ARATH2.1e-4534.90Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana GN=CNGC1... [more]
CNG14_ARATH2.1e-4537.20Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana GN=CNGC1... [more]
CNG20_ARATH1.1e-4331.10Probable cyclic nucleotide-gated ion channel 20, chloroplastic OS=Arabidopsis th... [more]
BLAST of Lsi03G001560 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXJ7_CUCSA7.0e-22693.79Uncharacterized protein OS=Cucumis sativus GN=Csa_5G638350 PE=4 SV=1[more]
A0A061EMN1_THECC1.7e-18776.91Cyclic nucleotide-regulated ion channel family protein isoform 1 OS=Theobroma ca... [more]
A0A061EF03_THECC3.8e-18780.95Cyclic nucleotide-regulated ion channel family protein isoform 2 (Fragment) OS=T... [more]
M0ZM31_SOLTU5.4e-18680.15Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001441 PE=4 SV=1[more]
K4BC11_SOLLC6.0e-18576.76Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
BLAST of Lsi03G001560 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G15410.19.8e-17977.67 Cyclic nucleotide-regulated ion channel family protein[more]
AT5G54250.11.0e-7946.49 cyclic nucleotide-gated cation channel 4[more]
AT5G14870.11.2e-4634.90 cyclic nucleotide-gated channel 18[more]
AT2G24610.11.2e-4637.20 cyclic nucleotide-gated channel 14[more]
AT3G17700.16.4e-4531.10 cyclic nucleotide-binding transporter 1[more]
BLAST of Lsi03G001560 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778707371|ref|XP_004141458.2|1.0e-22593.79PREDICTED: cyclic nucleotide-gated ion channel 2 [Cucumis sativus][more]
gi|659118887|ref|XP_008459361.1|1.2e-22392.34PREDICTED: cyclic nucleotide-gated ion channel 2 [Cucumis melo][more]
gi|590650478|ref|XP_007032653.1|2.4e-18776.91Cyclic nucleotide-regulated ion channel family protein isoform 1 [Theobroma caca... [more]
gi|590650497|ref|XP_007032654.1|5.4e-18780.95Cyclic nucleotide-regulated ion channel family protein isoform 2, partial [Theob... [more]
gi|697161878|ref|XP_009589735.1|7.0e-18776.81PREDICTED: cyclic nucleotide-gated ion channel 2 [Nicotiana tomentosiformis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071805 potassium ion transmembrane transport
biological_process GO:0042391 regulation of membrane potential
biological_process GO:0070588 calcium ion transmembrane transport
biological_process GO:0007263 nitric oxide mediated signal transduction
biological_process GO:0009626 plant-type hypersensitive response
biological_process GO:0034220 ion transmembrane transport
cellular_component GO:0008076 voltage-gated potassium channel complex
cellular_component GO:0005622 intracellular
cellular_component GO:0017071 intracellular cyclic nucleotide activated cation channel complex
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005249 voltage-gated potassium channel activity
molecular_function GO:0005262 calcium channel activity
molecular_function GO:0005222 intracellular cAMP activated cation channel activity
molecular_function GO:0005242 inward rectifier potassium channel activity
molecular_function GO:0005216 ion channel activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G001560.1Lsi03G001560.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.10.287.70coord: 144..296
score: 6.4E-12coord: 369..425
score: 6.4
NoneNo IPR availablePANTHERPTHR10217VOLTAGE AND LIGAND GATED POTASSIUM CHANNELcoord: 34..297
score: 2.0E-233coord: 351..422
score: 2.0E
NoneNo IPR availablePANTHERPTHR10217:SF501CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2coord: 351..422
score: 2.0E-233coord: 34..297
score: 2.0E
NoneNo IPR availableunknownSSF81324Voltage-gated potassium channelscoord: 369..425
score: 2.59E-22coord: 95..297
score: 2.59