Lsi03G001110 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi03G001110
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Descriptionalpha/beta-Hydrolases superfamily protein
Locationchr03 : 1603002 .. 1606319 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAATGATCGTAGCAATAGGCCTAGCATTTACAGTGGTTGTTGTTGCATGGGTTTATCGAGCAGTCAAACCTCCAGCTCCAAAGAAATGTGGAACAGCAAATGGGCCTCCAATAACTTCACCAAGAGTGAAGCTCAATGATGGCAGACATTTAGCCTACAAAGAATTTGGAGTTCCTAAGGAAAAGGCTAAATACAAAATCATTATTTCACATGGCTATAATGCTTCCAAACATATGCACTTGGCTATTTCTCAAGTATGTCTTTTTCTAACAATTTTTGAAGGTTTAAAGTCACGTTAAAAGAATCTGGTAGATACATAGAGTTGAAAGTTCAAGAACCTTATTAAACACTACTTAAAATATTATGAGACTCTGTAGTTTAACATAAACAATAAATCATAAGTTTTTATTAATGTAAACTTAACTATTTGATTAACTAAAGAAAGAAATGTAATAAATAATGTCAATGTTGGAATGCTTTGAATCTGTTATTCGGCGAAACCTAAGTTTTATACGTATGTATGTTATTGACATTATTTACGAGTTTGGTCTAGGATTTAGAGGAGTGTGCTATATAAACAATCTAACTCTGTTGGTGGCTCTAAATCTATAATCTAATATTTTCTTTTCTAATAATAAGTTGTTGTTAGTTTACCACATAAATCCATGTATCGGTTTCTTTATGGATCTTTACGTTTTATGTTTACTTTGTTTTTCGATTTCATAACAGTTGAGTTATGATTATTTCAGGAATTTATGGAGGAGCTTAAAGCATATATAGTATTATATGATAGAGCTGGTTATGGAGACAGTGACCCATATCCATCACGCTCAATAAAAACAGAAGCATTTGACATTCAAGAATTAGCAGACAAATTGGAGCTTGGAAACAAATTTTATGTAATTGGATGTTCACTGGGAGCATATCCTATTTGGGGTTGTCTAAAATACATTCCACACAGGCATTTTAATTTTCCTTCATTCACTATGAATATTATTTTTTTTCACTTTCATTAAATCTTAATTAACGGAGCTAATTCATTTGCAGACTCCTAGGAGCTTCCTTGGTAGTTCCTTTTGTGAATTATTGGTGGTCTTCCATTCCATCAGCTTTATCAACACAATCCTTTAGGAAGCTTCCTCGATCTTTCCAATATACATTTGGAATTGCACATTACACACCTTGGTTATACTATTGGTGGACTAAACAAAAATGGTACCGATCACTAGCGGTTGAAGCATTGTTCACTGAATCGGATTTAGAGTTATTAAAGGAGATATTGGCATGCCCAACTATTGCTCTGGTAATTTTCTTCTTTTCAAATAAATCTTACAATATTTTATCCGCGTTTTTAGGAAAAGTATGTATTGATTGCATTCTATTGCATACTTAAGAGCCAATTTGGTATGACTTTTTTAAATAGTATTAAAAAATTATCATCATATAATTAAAGCATATTTTAAAGGCTTGTGGTTTTTTTTTTTTTTTTTTTTTCTCTCCTTTTTTTTTTTTTTCATTTTTTTTTTTTTTTTTCTCTCCTTTTTTTTTTTTTTCATTTTTTTTTTTTTTTTTCTCTCCTTTTTTTTTTTTTTCATTTTTTTTTTTTTTTTTCTCTCCTTTTTTTTTTTTTTCATTTTTTTTTTTTTTTTTCTCTCCTTTTTTTTTTTTTTCATTTTTTTTTTTTTTTTTCTCTCCTTTTTTTTTTTTTTCATTTTTTTTTTTTTTTTTCTCTCCTTTTTTTTTTTTTTCATTTTTTTTTTTTTTTTTCTCTCCTTTTTTTTTTTTTTCATTTTTTTTTTTTTTTTTCTCTCCTTTTTTTTTTTTTTCATTTTTTTTTTTTTTTTTCTCTCCTTTTTTTTTTTTTTCATTTTTTTTTTTTTTTTTCTCTCCTTTTTTTTTTTTTTCATTTTTTTTTTTTTTTTTCATTTTTTTTTTTTTTTTTGGAAGCTTGAAGACAAAAAAAAAAAAGTCTAAAAACACTTGAAAGTAATTTAAAGTTCATTTAGCGGAGGAAGTAGTTAATTACTTTGTAGCGATTCTGTTCAGATTGGTGTTGCATAGAGCATTAGTTTGGTGTTGCCTAGAGTATTTAAAAGTGATTTTCAATAACTTAATTGTAATTATTCAATTATTATTTTAGCCATTTTAATGACATATTTCGAATTGACTTTTTAGAATAAATATTTTGATCTAAATTATTCAATTATAAATTAGTTTTCCAAATGTGTTATAAATCAGGTTTCATACTTGTAAAAGTGATTTAAATTTAATTAAAAATATTTTTAAATAATCAATATTTATTACCAAAGATAATTTAGAAGGATCAAATTACTAAATTAGGGAGTGGTAGACAAAAATTATACAGAGAGAAATAAAAGTTTAAGGGAGAAAAAATGGGAAGTTAGAGAAAATTGTCAAAAAGAAAAAAGTGTATGAGATAGGAGAAATTTGGAGTGATATTTCATAGAGAACTAAAATTCAAAGATAGGGAAATAAAGTTACATAAATATAAAGGAGATAAATTTTTGTTTGTGAAAATGACAAAATTTTATGAAGAATAACTTTAGAGGATGTGGTAGACAAAATTATATAAAGAAACATAAAAGTTTAAGAGAGAAAATAGAGAGCTAGAGAAAAAAAAAATGATAAGATAGAGAAGAAATTTAGAGACAAATTTAATAGAAAACTAAAATTCAAAGATAGGGAAATAAAGTTACAGAGATATAAATGATATATATATATACTACTTGTTTGGTTCCAAGAGTTTGTGGGCCTCACGACTAAAACATCAATTTTATGTTTTATTATCTTCGTACACTGTGGTGAGTTCTCAACTTTGCAGACTTCACAACTCTAGTCCTTGCCTCAATCATCTCCTAAGTGATTTTGTATGTTTACAAAATCACTGTCTCATCATTGTGATATAACAATCATGTTTGAAAAAACATATAATTTAGTTATTTTATATGCTAAACTTCACGTAAACTTTCTATCTCTTCTAATATTTTTGCTGTAACTAAGTACAGGAAAAAATAAGACAGCAAGGTGAATATGAAAGTCTTCATCGAGACATGTTGGTTTCTTTTGGGAAATGGGAGTTTGATCCCCTTGAATTGACCAATCCATTCACTGAGAATAAAGGGTCTGTTCATATATGGCAAGGTGGTGCAGATCGTGTCATCCCAATTGAATTTAATCGTTTTATAGCACAAAAACTTCCATGGATTCAGTATCATGAGGTTCCCAATGCTGGCCATTTAATAGTTCATGAAGCTGAAAGATTTAGAGCCATAATAAAGACACTTTTAGCTGGATAA

mRNA sequence

GCAATGATCGTAGCAATAGGCCTAGCATTTACAGTGGTTGTTGTTGCATGGGTTTATCGAGCAGTCAAACCTCCAGCTCCAAAGAAATGTGGAACAGCAAATGGGCCTCCAATAACTTCACCAAGAGTGAAGCTCAATGATGGCAGACATTTAGCCTACAAAGAATTTGGAGTTCCTAAGGAAAAGGCTAAATACAAAATCATTATTTCACATGGCTATAATGCTTCCAAACATATGCACTTGGCTATTTCTCAAGAAAAAATAAGACAGCAAGGTGAATATGAAAGTCTTCATCGAGACATGTTGGTTTCTTTTGGGAAATGGGAGTTTGATCCCCTTGAATTGACCAATCCATTCACTGAGAATAAAGGGTCTGTTCATATATGGCAAGGTGGTGCAGATCGTGTCATCCCAATTGAATTTAATCGTTTTATAGCACAAAAACTTCCATGGATTCAGTATCATGAGGTTCCCAATGCTGGCCATTTAATAGTTCATGAAGCTGAAAGATTTAGAGCCATAATAAAGACACTTTTAGCTGGATAA

Coding sequence (CDS)

GCAATGATCGTAGCAATAGGCCTAGCATTTACAGTGGTTGTTGTTGCATGGGTTTATCGAGCAGTCAAACCTCCAGCTCCAAAGAAATGTGGAACAGCAAATGGGCCTCCAATAACTTCACCAAGAGTGAAGCTCAATGATGGCAGACATTTAGCCTACAAAGAATTTGGAGTTCCTAAGGAAAAGGCTAAATACAAAATCATTATTTCACATGGCTATAATGCTTCCAAACATATGCACTTGGCTATTTCTCAAGAAAAAATAAGACAGCAAGGTGAATATGAAAGTCTTCATCGAGACATGTTGGTTTCTTTTGGGAAATGGGAGTTTGATCCCCTTGAATTGACCAATCCATTCACTGAGAATAAAGGGTCTGTTCATATATGGCAAGGTGGTGCAGATCGTGTCATCCCAATTGAATTTAATCGTTTTATAGCACAAAAACTTCCATGGATTCAGTATCATGAGGTTCCCAATGCTGGCCATTTAATAGTTCATGAAGCTGAAAGATTTAGAGCCATAATAAAGACACTTTTAGCTGGATAA

Protein sequence

AMIVAIGLAFTVVVVAWVYRAVKPPAPKKCGTANGPPITSPRVKLNDGRHLAYKEFGVPKEKAKYKIIISHGYNASKHMHLAISQEKIRQQGEYESLHRDMLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNAGHLIVHEAERFRAIIKTLLAG
Homology
[Close]
BLAST of Lsi03G001110 vs. TrEMBL
Match: A0A0A0LT05_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G160215 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 4.1e-41
Identity = 79/96 (82.29%), Postives = 86/96 (89.58%), Query Frame = 1 

Query: 85  QEKIRQQGEYESLHRDMLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRF 144
           +EKIRQQGEYE LHRD+LVSFGKWEFDP ELTNP TENK SVH+WQGGADRVIPIEF+RF
Sbjct: 230 KEKIRQQGEYECLHRDVLVSFGKWEFDPTELTNPSTENKRSVHMWQGGADRVIPIEFSRF 289

Query: 145 IAQKLPWIQYHEVPNAGHLIVHEAERFRAIIKTLLA 181
           +AQKLPWI YHEVPNAGHLIVHE E  +AII+ L A
Sbjct: 290 VAQKLPWIHYHEVPNAGHLIVHEGESLKAIIRALTA 325

[Close]
BLAST of Lsi03G001110 vs. TrEMBL
Match: A0A0A0KSU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650285 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.8e-36
Identity = 65/95 (68.42%), Postives = 82/95 (86.32%), Query Frame = 1 

Query: 85  QEKIRQQGEYESLHRDMLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRF 144
           Q+K+ QQGE+ESLHRD+L ++GKWEFDP+EL NPF + KGSVH+WQG  DR++P+E NRF
Sbjct: 254 QKKVLQQGEHESLHRDLLCAYGKWEFDPMELRNPFPDEKGSVHMWQGSKDRIVPVELNRF 313

Query: 145 IAQKLPWIQYHEVPNAGHLIVHEAERFRAIIKTLL 180
           IAQKLPWIQYHE+PN GHL+VHE + F AI++ LL
Sbjct: 314 IAQKLPWIQYHELPNYGHLLVHEPQNFEAILRALL 348

[Close]
BLAST of Lsi03G001110 vs. TrEMBL
Match: A0A0B0P8S0_GOSAR (Uncharacterized protein 31.7 kDa protein in traX-finO intergenic region OS=Gossypium arboreum GN=F383_06821 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.1e-33
Identity = 59/98 (60.20%), Postives = 83/98 (84.69%), Query Frame = 1 

Query: 82  AISQEKIRQQGEYESLHRDMLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEF 141
           ++ QEKI+QQG YESLHRD++VS+GKWEFDP++L NPF  N+GSVHIWQG  DR+IP + 
Sbjct: 218 SVGQEKIQQQGVYESLHRDIMVSYGKWEFDPMDLINPFPNNEGSVHIWQGYEDRIIPFQV 277

Query: 142 NRFIAQKLPWIQYHEVPNAGHLIVHEAERFRAIIKTLL 180
           NR++++KLPWI YHEVP+AGHL++ E++   A+++ L+
Sbjct: 278 NRYLSEKLPWIHYHEVPDAGHLLIFESKNCEAVLRELV 315

[Close]
BLAST of Lsi03G001110 vs. TrEMBL
Match: A0A061GVE0_THECC (Alpha/beta-Hydrolases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_041438 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 9.1e-33
Identity = 59/97 (60.82%), Postives = 82/97 (84.54%), Query Frame = 1 

Query: 83  ISQEKIRQQGEYESLHRDMLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFN 142
           + QEKIRQQG +ESL RD++VS+GKWEFDP++L NPF +N+GSVHIWQG  DR+IP + N
Sbjct: 273 VGQEKIRQQGVHESLDRDIMVSYGKWEFDPMDLVNPFPDNEGSVHIWQGYEDRIIPFQVN 332

Query: 143 RFIAQKLPWIQYHEVPNAGHLIVHEAERFRAIIKTLL 180
           R++++KLPWI YHEVP+AGHL++ E++   A+++ LL
Sbjct: 333 RYLSEKLPWIHYHEVPDAGHLLIFESKNCEAVLRALL 369

[Close]
BLAST of Lsi03G001110 vs. TrEMBL
Match: A0A061GW93_THECC (Alpha/beta-Hydrolases superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_041438 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 9.1e-33
Identity = 59/97 (60.82%), Postives = 82/97 (84.54%), Query Frame = 1 

Query: 83  ISQEKIRQQGEYESLHRDMLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFN 142
           + QEKIRQQG +ESL RD++VS+GKWEFDP++L NPF +N+GSVHIWQG  DR+IP + N
Sbjct: 244 VGQEKIRQQGVHESLDRDIMVSYGKWEFDPMDLVNPFPDNEGSVHIWQGYEDRIIPFQVN 303

Query: 143 RFIAQKLPWIQYHEVPNAGHLIVHEAERFRAIIKTLL 180
           R++++KLPWI YHEVP+AGHL++ E++   A+++ LL
Sbjct: 304 RYLSEKLPWIHYHEVPDAGHLLIFESKNCEAVLRALL 340

[Close]
BLAST of Lsi03G001110 vs. TAIR10
Match: AT5G22460.1 (AT5G22460.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 136.7 bits (343), Expect = 1.4e-32
Identity = 58/94 (61.70%), Postives = 72/94 (76.60%), Query Frame = 1 

Query: 86  EKIRQQGEYESLHRDMLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFI 145
           EK+RQQG++E LHRDM+  F  WEFDP EL NPF E +GSVH+WQG  DR+IP E NR+I
Sbjct: 245 EKVRQQGDHECLHRDMIAGFATWEFDPTELENPFAEGEGSVHVWQGMEDRIIPYEINRYI 304

Query: 146 AQKLPWIQYHEVPNAGHLIVHEAERFRAIIKTLL 180
           ++KLPWI+YHEV   GHL+  E E+ + IIK LL
Sbjct: 305 SEKLPWIKYHEVLGYGHLLNAEEEKCKDIIKALL 338

[Close]
BLAST of Lsi03G001110 vs. TAIR10
Match: AT2G36290.1 (AT2G36290.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 130.2 bits (326), Expect = 1.3e-30
Identity = 60/118 (50.85%), Postives = 78/118 (66.10%), Query Frame = 1 

Query: 62  KAKYKIIISHGYNASKHMHLAISQEKIRQQGEYESLHRDMLVSFGKWEFDPLELTNPFTE 121
           KA  +I+   G   S+H      + +IRQQG +E+LHRDM+V FG WEFDP+EL N F  
Sbjct: 246 KADKEIMFKLGAARSQH------EAQIRQQGTHETLHRDMIVGFGTWEFDPMELENLFPN 305

Query: 122 NKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNAGHLIVHEAERFRAIIKTLL 180
           N+GSVH+WQG  D ++P+   R+IA+KLPWI YHE+P AGHL          I+KTLL
Sbjct: 306 NEGSVHLWQGDDDVLVPVTLQRYIAKKLPWIHYHEIPGAGHLFPFAPGMVNNIVKTLL 357

[Close]
BLAST of Lsi03G001110 vs. TAIR10
Match: AT3G48410.1 (AT3G48410.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 123.2 bits (308), Expect = 1.6e-28
Identity = 50/94 (53.19%), Postives = 66/94 (70.21%), Query Frame = 1 

Query: 88  IRQQGEYESLHRDMLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFIAQ 147
           IRQQGEY SLHRD+ V+F  WEFDPL+L +PF  N GSVH+W G  D+ +P++  R++A 
Sbjct: 280 IRQQGEYVSLHRDLNVAFSSWEFDPLDLQDPFPNNNGSVHVWNGDEDKFVPVKLQRYVAS 339

Query: 148 KLPWIQYHEVPNAGHLIVHEAERFRAIIKTLLAG 182
           KLPWI+YHE+  +GH +         IIK+LL G
Sbjct: 340 KLPWIRYHEISGSGHFVPFVEGMTDKIIKSLLVG 373

[Close]
BLAST of Lsi03G001110 vs. TAIR10
Match: AT1G74290.1 (AT1G74290.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 120.9 bits (302), Expect = 7.9e-28
Identity = 52/113 (46.02%), Postives = 71/113 (62.83%), Query Frame = 1 

Query: 67  IIISHGYNASKHMHLAISQEKIRQQGEYESLHRDMLVSFGKWEFDPLELTNPFTENKGSV 126
           II   GY    H        ++RQQG +ES++RDM+V FG WEFDPL+L NPF  N+G V
Sbjct: 256 IISKRGYTRKPHW------AEVRQQGIHESINRDMIVGFGNWEFDPLDLDNPFLNNEGFV 315

Query: 127 HIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNAGHLIVHEAERFRAIIKTLL 180
           H+WQG  D ++P++  R++A +LPW+ YHEVP +GH           I+ TLL
Sbjct: 316 HLWQGDEDMLVPVKLQRYLAHQLPWVHYHEVPRSGHFFHFTKGVVDNIVTTLL 362

[Close]
BLAST of Lsi03G001110 vs. TAIR10
Match: AT1G74300.1 (AT1G74300.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 120.6 bits (301), Expect = 1.0e-27
Identity = 60/132 (45.45%), Postives = 81/132 (61.36%), Query Frame = 1 

Query: 48  GRHLAYKEFGVPKEKAKYKIIISHGYNASKHMHLAISQEKIRQQGEYESLHRDMLVSFGK 107
           G  +  ++ GV  +  K  II+  G  +S+  HLA    ++RQQG +ES++RDM+V FG 
Sbjct: 220 GSSVVNRDGGVLSQPDK-DIILKLG--SSRKPHLA----EVRQQGIHESINRDMIVGFGN 279

Query: 108 WEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQYHEVPNAGHLIVHE 167
           WEFDPLEL NPF   +GSVH+WQG  D ++P+   R+IA KLPW+ YHEV   GH     
Sbjct: 280 WEFDPLELENPFLNREGSVHLWQGDEDMLVPVTLQRYIADKLPWLHYHEVAGGGHFFPLA 339

Query: 168 AERFRAIIKTLL 180
                 I+KT L
Sbjct: 340 KGVVDEIVKTAL 344

[Close]
BLAST of Lsi03G001110 vs. NCBI nr
Match: gi|720050175|ref|XP_010271683.1| (PREDICTED: uncharacterized protein LOC104607688 [Nelumbo nucifera])

HSP 1 Score: 219.5 bits (558), Expect = 4.6e-54
Identity = 92/164 (56.10%), Postives = 121/164 (73.78%), Query Frame = 1 

Query: 16  AWVYRAVKPPAPKKCGTANGPPITSPRVKLNDGRHLAYKEFGVPKEKAKYKIIISHGYNA 75
           AW+Y+A  PP PK CGT  GPP+TSPR++++DGRHLAY+E GVPK+ AKYKIII HG+  
Sbjct: 15  AWLYQATVPPPPKICGTPGGPPVTSPRIRVSDGRHLAYRETGVPKQDAKYKIIIVHGFGV 74

Query: 76  SKHMHLAISQEKIRQQGEYESLHRDMLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADR 135
            K       Q+K +QQG +ESLHRD++V FG WEFDP+EL NPF  N+ SVHIWQG  DR
Sbjct: 75  CKDFEPPFPQDKAKQQGVFESLHRDLMVGFGTWEFDPMELNNPFPHNESSVHIWQGYEDR 134

Query: 136 VIPIEFNRFIAQKLPWIQYHEVPNAGHLIVHEAERFRAIIKTLL 180
           +IP+   R++ ++LPW+QYHE P+ GH+I  +      I++TLL
Sbjct: 135 IIPVLLQRYVTERLPWVQYHEFPDGGHMIYLDTRICEDILRTLL 178

[Close]
BLAST of Lsi03G001110 vs. NCBI nr
Match: gi|694392935|ref|XP_009371926.1| (PREDICTED: uncharacterized protein LOC103961127 [Pyrus x bretschneideri])

HSP 1 Score: 213.8 bits (543), Expect = 2.5e-52
Identity = 94/153 (61.44%), Postives = 123/153 (80.39%), Query Frame = 1 

Query: 2   MIVAIGLAFTVVVVAWVYRAVKPPAPKKCGTANGPPITSPRVKLNDGRHLAYKEFGVPKE 61
           MI  + +A TV ++ W Y+A+KPP PK CG+  GPP+TSPR KL+DGRHLAY+E GVPKE
Sbjct: 1   MIGPVAIALTVGLLGWAYQALKPPPPKFCGSPGGPPVTSPRAKLSDGRHLAYRELGVPKE 60

Query: 62  KAKYKIIISHGYNASKHMHLAISQEKIRQQGEYESLHRDMLVSFGKWEFDPLELTNPFTE 121
           +AK KII+ HG+ +SK + L ++QEKI QQGE+ESL RD+L  +GKWEFDP++L NPF +
Sbjct: 61  EAKDKIIVIHGFLSSKDLSLPVAQEKITQQGEHESLFRDILAGYGKWEFDPMDLNNPFPD 120

Query: 122 NKGSVHIWQGGADRVIPIEFNRFIAQKLPWIQY 155
           N+GSVHIWQG  D++IP + NR+IA KLPWI+Y
Sbjct: 121 NEGSVHIWQGYEDKIIPYKLNRYIAGKLPWIRY 153

[Close]
BLAST of Lsi03G001110 vs. NCBI nr
Match: gi|449443624|ref|XP_004139577.1| (PREDICTED: uncharacterized protein LOC101208214 [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 5.9e-41
Identity = 79/96 (82.29%), Postives = 86/96 (89.58%), Query Frame = 1 

Query: 85  QEKIRQQGEYESLHRDMLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRF 144
           +EKIRQQGEYE LHRD+LVSFGKWEFDP ELTNP TENK SVH+WQGGADRVIPIEF+RF
Sbjct: 230 KEKIRQQGEYECLHRDVLVSFGKWEFDPTELTNPSTENKRSVHMWQGGADRVIPIEFSRF 289

Query: 145 IAQKLPWIQYHEVPNAGHLIVHEAERFRAIIKTLLA 181
           +AQKLPWI YHEVPNAGHLIVHE E  +AII+ L A
Sbjct: 290 VAQKLPWIHYHEVPNAGHLIVHEGESLKAIIRALTA 325

[Close]
BLAST of Lsi03G001110 vs. NCBI nr
Match: gi|659071728|ref|XP_008461618.1| (PREDICTED: uncharacterized protein LOC103500177 [Cucumis melo])

HSP 1 Score: 172.9 bits (437), Expect = 5.0e-40
Identity = 77/96 (80.21%), Postives = 87/96 (90.62%), Query Frame = 1 

Query: 85  QEKIRQQGEYESLHRDMLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRF 144
           +EKIRQQG+YE LHRD+LVSFGKWEFDP ELTNP TE+  SVH+WQGGADRVIPIEF+RF
Sbjct: 241 KEKIRQQGDYECLHRDVLVSFGKWEFDPTELTNPSTESIRSVHMWQGGADRVIPIEFSRF 300

Query: 145 IAQKLPWIQYHEVPNAGHLIVHEAERFRAIIKTLLA 181
           +AQKLPWIQYHEVPNAGHLIVHE E  +AII+ L+A
Sbjct: 301 VAQKLPWIQYHEVPNAGHLIVHEGESLKAIIRALIA 336

[Close]
BLAST of Lsi03G001110 vs. NCBI nr
Match: gi|700197498|gb|KGN52675.1| (hypothetical protein Csa_5G650285 [Cucumis sativus])

HSP 1 Score: 160.6 bits (405), Expect = 2.5e-36
Identity = 65/95 (68.42%), Postives = 82/95 (86.32%), Query Frame = 1 

Query: 85  QEKIRQQGEYESLHRDMLVSFGKWEFDPLELTNPFTENKGSVHIWQGGADRVIPIEFNRF 144
           Q+K+ QQGE+ESLHRD+L ++GKWEFDP+EL NPF + KGSVH+WQG  DR++P+E NRF
Sbjct: 254 QKKVLQQGEHESLHRDLLCAYGKWEFDPMELRNPFPDEKGSVHMWQGSKDRIVPVELNRF 313

Query: 145 IAQKLPWIQYHEVPNAGHLIVHEAERFRAIIKTLL 180
           IAQKLPWIQYHE+PN GHL+VHE + F AI++ LL
Sbjct: 314 IAQKLPWIQYHELPNYGHLLVHEPQNFEAILRALL 348

The following BLAST results are available for this feature:
BLAST of Lsi03G001110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi03G001110 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LT05_CUCSA4.1e-4182.29Uncharacterized protein OS=Cucumis sativus GN=Csa_1G160215 PE=4 SV=1[more]
A0A0A0KSU1_CUCSA1.8e-3668.42Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650285 PE=4 SV=1[more]
A0A0B0P8S0_GOSAR3.1e-3360.20Uncharacterized protein 31.7 kDa protein in traX-finO intergenic region OS=Gossy... [more]
A0A061GVE0_THECC9.1e-3360.82Alpha/beta-Hydrolases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_04... [more]
A0A061GW93_THECC9.1e-3360.82Alpha/beta-Hydrolases superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_04... [more]
BLAST of Lsi03G001110 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G22460.11.4e-3261.70 alpha/beta-Hydrolases superfamily protein[more]
AT2G36290.11.3e-3050.85 alpha/beta-Hydrolases superfamily protein[more]
AT3G48410.11.6e-2853.19 alpha/beta-Hydrolases superfamily protein[more]
AT1G74290.17.9e-2846.02 alpha/beta-Hydrolases superfamily protein[more]
AT1G74300.11.0e-2745.45 alpha/beta-Hydrolases superfamily protein[more]
BLAST of Lsi03G001110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|720050175|ref|XP_010271683.1|4.6e-5456.10PREDICTED: uncharacterized protein LOC104607688 [Nelumbo nucifera][more]
gi|694392935|ref|XP_009371926.1|2.5e-5261.44PREDICTED: uncharacterized protein LOC103961127 [Pyrus x bretschneideri][more]
gi|449443624|ref|XP_004139577.1|5.9e-4182.29PREDICTED: uncharacterized protein LOC101208214 [Cucumis sativus][more]
gi|659071728|ref|XP_008461618.1|5.0e-4080.21PREDICTED: uncharacterized protein LOC103500177 [Cucumis melo][more]
gi|700197498|gb|KGN52675.1|2.5e-3668.42hypothetical protein Csa_5G650285 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G001110.1Lsi03G001110.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10992ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEINcoord: 2..181
score: 2.0
NoneNo IPR availablePANTHERPTHR10992:SF886ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEINcoord: 2..181
score: 2.0