Lsi03G000990 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACCGTCTGATCTACATATTGGCCACGCCTGGTTACGACACGTGGATCCTAAATAGTGACAACCAGTACGGTGACGGTTTGTTTAAATCTCTTCCGATAACAGGCGGGTAAGAATTAGCGGGTTTTAGTCACAGTCACTGTTTATTATCTTCTACTGCAAAAACTGCAGCATTCTCCTCACTCGAGCTTCACGAACCTTGGCGACTGTGGAGGGCCGGAGGGGTTTTTGATTTGTTTCGTCAAGGTTCTCGCATGGAGTCGATTGGTTGTAGTTTGAGTTCTTTATCGTTGGCTCAATTCAGGGTGAAGAGTTTTTCGGTTCAGGAGCTGTTATTTGGTCATCGCCGGAGCCTTCCATCGCCGATAGTTCATGCATCGGTGGCTCAGATCTTTCCGGAGCTTCGAAAATCTACTTCTCTTGCTGCTAGTGGTACCTTGATGGCCAATTCCGTGCCGGTGTGTTGTTCTGTTTAGTATTATTGTTATTTCTGTTTTTCGTCTTTTATATGTGAGTATTGGTGAATTCGATTTGTTGGTAGTTTGTCTCGAATGTTTCGTTGTGATTGAGATGGATATACTTTCTCGATTTGAATTTTCTGGTAAGTGTAATTTGATGGAACTTGGAGAATGGGAAATGTTGTCGGAGAACTTAAATTTTGAGTGAGTTCGTGTTTTGTTAGAAGAACTTAACGAATTTACATAATGATTTTGAGGTATGGAGCTTAGTACATTTTGATGGTTCATTCTGATCATTAATTGCTGCTGAGTTTTTCTATGTTCCTCTTTATTTGATTTCGAAAAGTCAGGGTTGTGCTTGAAATTTATACTCATGATCATTGTTCTACTGAATAACTGTACTTCTCTGACTTGTTCTCATCTTCTAATTTTTCCAGGGTATTAGAAATTTATTCTTCTTTCTTTAATATTTTGATATGCAGTCAAGAAGTGGTGTATACATAGTTGGTGACTTTATGACTAGGAAAGAGGAGTTGCATGTTGTAAAGCCCACAACCAGTGTTGATGAAGGTAGTTGAAATTTTTGGAAATTTTCCTCCAACCTATTGGCAAAATGTGGCTTATTGTGTCTGTTTATGCATACAGCATTAGAAATTCTGGTGGAGAAAAGGATCACAGGATTTCCAGTAATTGATGACAATTGGAAATTGGTATCATTTCATTTCCCATATTTATTAGAGACATTTCTCTAATATAGTTATGTTTTTATCTTGTTGGCCCGTTTGCAAGTATATCTGGTTTATCTAACATCCGCATATTGGCCCATGAAACCTTTCCTCTGAAGTTGTTGAGTTCTGTCCAGGATTTTGAATCGTCAAGTTTTCACTTTTCACACTATCACTTGTATGATCATGAGAATCTAATTTTTCGGTCTGTTCCCCGTCCATAACTGAATTGGGAAAGCATATGTTGCCTCCCCCACAATTTGTTTTGAATGTCGTATTGAATTTGGAAGTCAAGACAGATGGCACATGTTGCTTAGTGCTATACAAGTCGATCCGTTGCCTTTTTTTTTTCAGATCCTGATCAGGATGAATACAACCTTTAATGCTTATAATTTGTGTGAATTGAAGCTCGTGTGACTTTTTTTTTTTTTTTTTTTGTGCTCTCATACACCTTTATCTGTATTATCAATGAAGTGTATGATTGATTGGCCTAACGTTGGATACTTAATCATCGATGCTCATAATAGAAATTGCTTCTTGATGCAGGTTGGCGTAGTTTCTGACTACGACTTGTTAGCACTAGATTCCATCTCAGGTATATTTGAAATTTCTTGTTATTCCTGTCAGCAAGTTGTCTAATTCCCACTCCTTGCCACTACCATCGTTTATCCTGTTTGAGAAAGATTGCTCAGTTGTCTTATCTTTTATGTTTGTTGCATATTTAGCTATGATTGTTTTTCAGGAAAGAAGAGAGAATTGGCTTTTGTAGATCTTTATATTTATATTTAGATAACTCAAGTTTCTGTACTTGACTCTCTTTTCCTATACTTTTTTGCAAGATTAGTATTGACTTTTTTTGCACCTATTGATTCTCTTTTTTCCAATTTGTTCAAAAGATAAAAGGTTAAAATGTCATTTTGGTTCTATACTTGGCTTTTCATCCCATTTTAGTCCCTACACTTTCAACAAATCTTAAATAAGTCTTAAATTTAGTCCCTTTACTTTTACTAAATCTTAAATTTATCCTATTTAGTTTGAGTAAATAAATTTAGTCCTTCGAAGAGACACCATGGGAGTCTATTTTCTAAATTCATAAAGGGAATATTAATATCAACTTTTTTTAAAAAAATATATCAATAATAACATTCTAACAGCTGACAGCTGGATTAAATTTAACACGTGAACTAAATTTGGACAATTGAAAGTATCAGTTATCTCTGATCCAAGAAAGGACTGATTTTCTTGTCATAACAAATGGTTTTATAGGTGTGGATATTGCAGATTTTTGGTTTTGTAATCTGAGGAACTTGGTCTGACCGCACTCATATAAGTTCAAGTATTTTAGAGTGATAAAATTTTCAATGTTCTAATTAGGTGGTGGAAGGACAGATACAAGCATGTTTCCTGAAGTTGACAGCTCGTGGAAAGTATGTATTGACCTCCTTTTTTTTTTTTTTTTTTTTGGCATTTACGTTTATTTGTAGTTGTTTTGTTTCACACCTTTTGCCATCAGTGTTCCCGATAACTTTATTTGTGCAATAATTTTATCCGAGTACTAAATGAAGTAGAAAACTGAACTTATGAAAAAATTTACATAAAGTAAGAGTTACTGTATTTAATTCGTTGGACAACGTGCTTAAACCTTTCAATTTACATAAAGAAGTATGATTTAAATTTACTGGTCAAAGATTTCATTTTCATGCATAGTGTTTATACCTCAGTGAGCACTGATATAGGCCTTGGTTTGTCTCTTCATTTATGCTTTTGGTTCTTTTTTCTTCCTTATGAACGTCAGTGTCGGATTTGGCAAGAGGCATATGAAGGGTAAACTGTGCACTTTACCAAAATAATTTTGTTTTCTCCTACTTTTCATAATTCTGACTTCAAATTGATGTTAATCTGTTGCTTGCTTATTTCAATTGCCTGCTACTTACTAGTTTGTAGAGGACATCAAATGGAAATATTTTGCACAAATGATGTCTCTAATCCTAAATCATCCTTGTAGACATTTAATGAGGTACAAAAGCTTCTAAGTAAAACTAATGGAAAGGTGGTCGGCGATTTGATGACACCCGCACCTCTTGTTGTTCGAGAAATTACCGATCTTGAGGATGTTGCTAGGTTCAAAAACGCTTTTCTCCACCGTTTCCGTAACATATCATTTTTGCCCTTGCGCTTGAATTTTGAAGCGTGTTCCTTTCTATTTTGTCAAATGCAGATTATTGCTTCAGACAAAGTATCGCCGACTTCCCGTGGTCGACGCCGATGGAAAGCTGGTAAGAGATATCTATTCCACTCTTCTAATGTGAATTTAATGGTGGTTCTCTCCCTCATATCTTAGCGTGAAATTATGATATCTTTAATGAAGGTTGGAATTATTACAAGAGGCAATGTGGTAAGAGCTGCTCTACAAATTAAGCATGCTGAAGAAAACAGAACATGATTTTTCCTATAGGTAGAAACAGAGTCAATCTGCATGCTGTTAGCACAGAGGATTCTGAAGTGCAATCATACAATTTTGGCTCATGATTGTATAAATATTACAGCACAACCAAAACCTGAATGACATAAATGCATTATCATATGCTCAAATGTCTAGTCTCTCTTCAACCCTTCTTTTCCTTTCCTTTCTTTTTTTGTTTCTATATTTTGAATCCCAAGCTTGGATTATCCTTATGATATATGGTATTATAGTTGGTCATTTGAGCAAGCTGTAAATGTTGGGGTTATTAACAGGAGATTAAATTGCGAGTCTATTTTCTAAACTTTCAGTTTGTGTCCAATATGTTGAAGGTTAATTTTGTGTATGGAAGGATCTATTGGGCATTAAATAGGATATTATACTTTCAGTCATCTTTATAGTATTTTTTTTTTTTAAAAGATAAATTTTACATGGAGAATCCTTTCTACCCCATAAATTTTATAAATGTCTTAAAATTGTGTTAGTTTCGAATTTTTTACTTTCAAATTTTGTTCTCTAGGAAATGAAAGTTTAGGATGAAAAAAAAACCCGAAATGATCTGAAAATGAGGTTAAAAATAAATTTAGAATTTTTATTTTCAAATTCTGTTTCTAGGAAATGAAAGTTCGGTATTATAGAGATATATGAGCTATATTTTCATGATATTTTTTTTTTTTTTGNACTAGTTTGTAGAGGACATCAAATGGAAATATTTTGCACAAATGATGTCTCTAATCCTAAATCATCCTTGTAGACATTTAATGAGGTACAAAAGCTTCTAAGTAAAACTAATGGAAAGGTGGTCGGCGATTTGATGACACCCGCACCTCTTGTTGTTCGAGAAATTACCGATCTTGAGGATGTTGCTAGGTTCAAAAACGCTTTTCTCCACCGTTTCCGTAACATATCATTTTTGCCCTTGCGCTTGAATTTTGAAGCGTGTTCCTTTCTATTTTGTCAAATGCAGATTATTGCTTCAGACAAAGTATCGCCGACTTCCCGTGGTCGACGCCGATGGAAAGCTGGTAAGAGATATCTATTCCACTCTTCTAATGTGAATTTAATGGTGGTTCTCTCCCTCATATCTTAGCGTGAAATTATGATATCTTTAATGAAGGTTGGAATTATTACAAGAGGCAATGTGGTAAGAGCTGCTCTACAAATTAAGCATGCTGAAGAAAACAGAACATGATTTTTCCTATAGGTAGAAACAGAGTCAATCTGCATGCTGTTAGCACAGAGGATTCTGAAGTGCAATCATACAATTTTGGCTCATGATTGTATAAATA CACCGTCTGATCTACATATTGGCCACGCCTGGTTACGACACGTGGATCCTAAATAGTGACAACCAGTACGGTGACGCATTCTCCTCACTCGAGCTTCACGAACCTTGGCGACTGTGGAGGGCCGGAGGGGTTTTTGATTTGTTTCGTCAAGGTTCTCGCATGGAGTCGATTGGTTGTAGTTTGAGTTCTTTATCGTTGGCTCAATTCAGGGTGAAGAGTTTTTCGGTTCAGGAGCTGTTATTTGGTCATCGCCGGAGCCTTCCATCGCCGATAGTTCATGCATCGGTGGCTCAGATCTTTCCGGAGCTTCGAAAATCTACTTCTCTTGCTGCTAGTGGTACCTTGATGGCCAATTCCGTGCCGTCAAGAAGTGGTGTATACATAGTTGGTGACTTTATGACTAGGAAAGAGGAGTTGCATGTTGTAAAGCCCACAACCAGTGTTGATGAAGCATTAGAAATTCTGGTGGAGAAAAGGATCACAGGATTTCCAGTAATTGATGACAATTGGAAATTGATCCTGATCAGGATGAATACAACCTTTAATGCTTATAATTTGTGTGAATTGAAGCTCGTTGGCGTAGTTTCTGACTACGACTTGTTAGCACTAGATTCCATCTCAGGTATATTTGAAATTTCTTGTTATTCCTGTGGTGGAAGGACAGATACAAGCATGTTTCCTGAAGTTGACAGCTCGTGGAAAACATTTAATGAGGTACAAAAGCTTCTAAGTAAAACTAATGGAAAGGTGGTCGGCGATTTGATGACACCCGCACCTCTTGTTGTTCGAGAAATTACCGATCTTGAGGATGTTGCTAGGTTCAAAAACGCTTTTCTCCACCGTTTCCGTAACATATCATTTTTGCCCTTGCGCTTGAATTTTGAAGCGTGTTCCTTTCTATTTTGTCAAATGCAGATTATTGCTTCAGACAAAGTATCGCCGACTTCCCGTGGTCGACGCCGATGGAAAGCTGGTAAGAGATATCTATTCCACTCTTCTAATGTGAATTTAATGGTGACATTTAATGAGGTACAAAAGCTTCTAAGTAAAACTAATGGAAAGGTGGTCGGCGATTTGATGACACCCGCACCTCTTGTTGTTCGAGAAATTACCGATCTTGAGGATGTTGCTAGATTATTGCTTCAGACAAAGTATCGCCGACTTCCCGTGGTCGACGCCGATGGAAAGCTGGTTGGAATTATTACAAGAGGCAATGTGGTAAGAGCTGCTCTACAAATTAAGCATGCTGAAGAAAACAGAACATGATTTTTCCTATAGGTAGAAACAGAGTCAATCTGCATGCTGTTAGCACAGAGGATTCTGAAGTGCAATCATACAATTTTGGCTCATGATTGTATAAATA CACCGTCTGATCTACATATTGGCCACGCCTGGTTACGACACGTGGATCCTAAATAGTGACAACCAGTACGGTGACGCATTCTCCTCACTCGAGCTTCACGAACCTTGGCGACTGTGGAGGGCCGGAGGGGTTTTTGATTTGTTTCGTCAAGGTTCTCGCATGGAGTCGATTGGTTGTAGTTTGAGTTCTTTATCGTTGGCTCAATTCAGGGTGAAGAGTTTTTCGGTTCAGGAGCTGTTATTTGGTCATCGCCGGAGCCTTCCATCGCCGATAGTTCATGCATCGGTGGCTCAGATCTTTCCGGAGCTTCGAAAATCTACTTCTCTTGCTGCTAGTGGTACCTTGATGGCCAATTCCGTGCCGTCAAGAAGTGGTGTATACATAGTTGGTGACTTTATGACTAGGAAAGAGGAGTTGCATGTTGTAAAGCCCACAACCAGTGTTGATGAAGCATTAGAAATTCTGGTGGAGAAAAGGATCACAGGATTTCCAGTAATTGATGACAATTGGAAATTGATCCTGATCAGGATGAATACAACCTTTAATGCTTATAATTTGTGTGAATTGAAGCTCGTTGGCGTAGTTTCTGACTACGACTTGTTAGCACTAGATTCCATCTCAGGTATATTTGAAATTTCTTGTTATTCCTGTGGTGGAAGGACAGATACAAGCATGTTTCCTGAAGTTGACAGCTCGTGGAAAACATTTAATGAGGTACAAAAGCTTCTAAGTAAAACTAATGGAAAGGTGGTCGGCGATTTGATGACACCCGCACCTCTTGTTGTTCGAGAAATTACCGATCTTGAGGATGTTGCTAGGTTCAAAAACGCTTTTCTCCACCGTTTCCGTAACATATCATTTTTGCCCTTGCGCTTGAATTTTGAAGCGTGTTCCTTTCTATTTTGTCAAATGCAGATTATTGCTTCAGACAAAGTATCGCCGACTTCCCGTGGTCGACGCCGATGGAAAGCTGGTAAGAGATATCTATTCCACTCTTCTAATGTGAATTTAATGGTGACATTTAATGAGGTACAAAAGCTTCTAAGTAAAACTAATGGAAAGGTGGTCGGCGATTTGATGACACCCGCACCTCTTGTTGTTCGAGAAATTACCGATCTTGAGGATGTTGCTAGATTATTGCTTCAGACAAAGTATCGCCGACTTCCCGTGGTCGACGCCGATGGAAAGCTGGTTGGAATTATTACAAGAGGCAATGTGGTAAGAGCTGCTCTACAAATTAAGCATGCTGAAGAAAACAGAACATGA HRLIYILATPGYDTWILNSDNQYGDAFSSLELHEPWRLWRAGGVFDLFRQGSRMESIGCSLSSLSLAQFRVKSFSVQELLFGHRRSLPSPIVHASVAQIFPELRKSTSLAASGTLMANSVPSRSGVYIVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVIDDNWKLILIRMNTTFNAYNLCELKLVGVVSDYDLLALDSISGIFEISCYSCGGRTDTSMFPEVDSSWKTFNEVQKLLSKTNGKVVGDLMTPAPLVVREITDLEDVARFKNAFLHRFRNISFLPLRLNFEACSFLFCQMQIIASDKVSPTSRGRRRWKAGKRYLFHSSNVNLMVTFNEVQKLLSKTNGKVVGDLMTPAPLVVREITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQIKHAEENRT
BLAST of Lsi03G000990 vs. Swiss-Prot
Match: CBSX1_ARATH (CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana GN=CBSX1 PE=1 SV=2) HSP 1 Score: 204.9 bits (520), Expect = 1.7e-51 Identity = 120/212 (56.60%), Postives = 137/212 (64.62%), Query Frame = 1
BLAST of Lsi03G000990 vs. Swiss-Prot
Match: CBSX2_ARATH (CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana GN=CBSX2 PE=1 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 3.1e-45 Identity = 100/174 (57.47%), Postives = 123/174 (70.69%), Query Frame = 1
BLAST of Lsi03G000990 vs. Swiss-Prot
Match: IMDH_PYRFU (Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=guaB PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 8.3e-06 Identity = 28/75 (37.33%), Postives = 48/75 (64.00%), Query Frame = 1
BLAST of Lsi03G000990 vs. TrEMBL
Match: A0A0A0LSY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G152500 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 6.9e-84 Identity = 176/220 (80.00%), Postives = 181/220 (82.27%), Query Frame = 1
BLAST of Lsi03G000990 vs. TrEMBL
Match: F6H4H6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00200 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 8.0e-56 Identity = 126/195 (64.62%), Postives = 143/195 (73.33%), Query Frame = 1
BLAST of Lsi03G000990 vs. TrEMBL
Match: W9QU25_9ROSA (CBS domain-containing protein CBSX1 OS=Morus notabilis GN=L484_007219 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 2.0e-54 Identity = 118/171 (69.01%), Postives = 133/171 (77.78%), Query Frame = 1
BLAST of Lsi03G000990 vs. TrEMBL
Match: A0A067GKB8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025613mg PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 2.6e-54 Identity = 120/176 (68.18%), Postives = 133/176 (75.57%), Query Frame = 1
BLAST of Lsi03G000990 vs. TrEMBL
Match: V4UIP4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026357mg PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 5.7e-54 Identity = 120/176 (68.18%), Postives = 132/176 (75.00%), Query Frame = 1
BLAST of Lsi03G000990 vs. TAIR10
Match: AT4G36910.1 (AT4G36910.1 Cystathionine beta-synthase (CBS) family protein) HSP 1 Score: 204.9 bits (520), Expect = 9.7e-53 Identity = 120/212 (56.60%), Postives = 137/212 (64.62%), Query Frame = 1
BLAST of Lsi03G000990 vs. TAIR10
Match: AT4G34120.1 (AT4G34120.1 Cystathionine beta-synthase (CBS) family protein) HSP 1 Score: 184.1 bits (466), Expect = 1.8e-46 Identity = 100/174 (57.47%), Postives = 123/174 (70.69%), Query Frame = 1
BLAST of Lsi03G000990 vs. NCBI nr
Match: gi|449443418|ref|XP_004139474.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis sativus]) HSP 1 Score: 319.3 bits (817), Expect = 1.0e-83 Identity = 176/220 (80.00%), Postives = 181/220 (82.27%), Query Frame = 1
BLAST of Lsi03G000990 vs. NCBI nr
Match: gi|659071762|ref|XP_008461810.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like [Cucumis melo]) HSP 1 Score: 315.5 bits (807), Expect = 1.4e-82 Identity = 175/220 (79.55%), Postives = 179/220 (81.36%), Query Frame = 1
BLAST of Lsi03G000990 vs. NCBI nr
Match: gi|225438783|ref|XP_002283079.1| (PREDICTED: CBS domain-containing protein CBSX1, chloroplastic [Vitis vinifera]) HSP 1 Score: 226.1 bits (575), Expect = 1.1e-55 Identity = 126/195 (64.62%), Postives = 143/195 (73.33%), Query Frame = 1
BLAST of Lsi03G000990 vs. NCBI nr
Match: gi|703088323|ref|XP_010093504.1| (CBS domain-containing protein CBSX1 [Morus notabilis]) HSP 1 Score: 221.5 bits (563), Expect = 2.8e-54 Identity = 118/171 (69.01%), Postives = 133/171 (77.78%), Query Frame = 1
BLAST of Lsi03G000990 vs. NCBI nr
Match: gi|641860430|gb|KDO79119.1| (hypothetical protein CISIN_1g025613mg [Citrus sinensis]) HSP 1 Score: 221.1 bits (562), Expect = 3.7e-54 Identity = 120/176 (68.18%), Postives = 133/176 (75.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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