Lsi03G000780 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi03G000780
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionFatty acyl-CoA reductase 3
Locationchr03 : 1082830 .. 1083479 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CATATGCCCCCCATCACTCTTCTTTATATATATTACACCCAAAGTTCTAAGTTCTAACCAAACAATTCACCACCAATTTCTCATATTATTATCCCTTCCTCTTCCCATTTCCATGGAGTTCCAAGGCGTACTTGAATTTCTTCACAATAAGTCCATCTTCGTCACCGGCGCCACTGGATTTCTCGCAAAAGGTCCTTCGTCTCCCCTTTCTCACTTTCAAAATAGGAATAAAATGTTAAATTTACTGAAACCTATCGACTTGAATTGTTTTCATGTTTACCTTCAAAATATGTATGAGAAAAAAATGTTAAGTTGTCTATGAAAATGCAGTAATGGTAGAGAAGATCTTAAGAGTTCAACCGAATGTGAAGAAGCTTTATCTACTCATACGAGCGACAGACGAGAAAGCTGCGACGCAACGCCTTAACACTGAGGTGATAGGGAAAGAGTTGTTCAGGGTATTGAAGGAAAAATGGGGAGAAAATTTTAGATCTATGATATCGGAAAAGCTCGTGGCGGTGGCCGGAGATATCTCCAACGAACTTTTGGTTCTCAAGGAGTACTCAAAATTGAGAGAAGAATTGTATGACCAAATTGATGTCATAGTGAACTTGGCTGCAACTACCAACTTTGATGAGAGGTACAAATAA

mRNA sequence

CATATGCCCCCCATCACTCTTCTTTATATATATTACACCCAAAGTTCTAAGTTCTAACCAAACAATTCACCACCAATTTCTCATATTATTATCCCTTCCTCTTCCCATTTCCATGGAGTTCCAAGGCGTACTTGAATTTCTTCACAATAAGTCCATCTTCGTCACCGGCGCCACTGGATTTCTCGCAAAAGTAATGGTAGAGAAGATCTTAAGAGTTCAACCGAATGTGAAGAAGCTTTATCTACTCATACGAGCGACAGACGAGAAAGCTGCGACGCAACGCCTTAACACTGAGGTGATAGGGAAAGAGTTGTTCAGGGTATTGAAGGAAAAATGGGGAGAAAATTTTAGATCTATGATATCGGAAAAGCTCGTGGCGGTGGCCGGAGATATCTCCAACGAACTTTTGGTTCTCAAGGAGTACTCAAAATTGAGAGAAGAATTGTATGACCAAATTGATGTCATAGTGAACTTGGCTGCAACTACCAACTTTGATGAGAGGTACAAATAA

Coding sequence (CDS)

ATGGAGTTCCAAGGCGTACTTGAATTTCTTCACAATAAGTCCATCTTCGTCACCGGCGCCACTGGATTTCTCGCAAAAGTAATGGTAGAGAAGATCTTAAGAGTTCAACCGAATGTGAAGAAGCTTTATCTACTCATACGAGCGACAGACGAGAAAGCTGCGACGCAACGCCTTAACACTGAGGTGATAGGGAAAGAGTTGTTCAGGGTATTGAAGGAAAAATGGGGAGAAAATTTTAGATCTATGATATCGGAAAAGCTCGTGGCGGTGGCCGGAGATATCTCCAACGAACTTTTGGTTCTCAAGGAGTACTCAAAATTGAGAGAAGAATTGTATGACCAAATTGATGTCATAGTGAACTTGGCTGCAACTACCAACTTTGATGAGAGGTACAAATAA

Protein sequence

MEFQGVLEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNTEVIGKELFRVLKEKWGENFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIVNLAATTNFDERYK
Homology
[Close]
BLAST of Lsi03G000780 vs. Swiss-Prot
Match: FAR_SIMCH (Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 6.4e-37
Identity = 81/130 (62.31%), Postives = 100/130 (76.92%), Query Frame = 1 

Query: 2   EFQGVLEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNTE 61
           E   +LEFL NK+I VTGATG LAK+ VEK+LR QPNVKKLYLL+RATD++ A  RL  E
Sbjct: 3   EMGSILEFLDNKAILVTGATGSLAKIFVEKVLRSQPNVKKLYLLLRATDDETAALRLQNE 62

Query: 62  VIGKELFRVLKEKWGENFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIVNL 121
           V GKELF+VLK+  G NF S +SEK+  V GDI+ E L LK+ + L+EE++ +IDV+VNL
Sbjct: 63  VFGKELFKVLKQNLGANFYSFVSEKVTVVPGDITGEDLCLKDVN-LKEEMWREIDVVVNL 122

Query: 122 AATTNFDERY 132
           AAT NF ERY
Sbjct: 123 AATINFIERY 131

[Close]
BLAST of Lsi03G000780 vs. Swiss-Prot
Match: FACR5_ARATH (Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana GN=FAR5 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.7e-35
Identity = 78/126 (61.90%), Postives = 102/126 (80.95%), Query Frame = 1 

Query: 7   LEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNTEVIGKE 66
           ++FL NK+I VTGATGFLAKV VEKILRVQPNVKKLYLL+RA+D +AAT+RL TEV  KE
Sbjct: 6   VQFLRNKTILVTGATGFLAKVFVEKILRVQPNVKKLYLLVRASDNEAATKRLRTEVFEKE 65

Query: 67  LFRVLKEKWG-ENFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIVNLAATT 126
           LF+VL++  G E   +++ EK+V+V GDI+ + L + + S LRE +  +ID++VN+AATT
Sbjct: 66  LFKVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGIND-SHLRERMQKEIDIVVNVAATT 125

Query: 127 NFDERY 132
           NFDERY
Sbjct: 126 NFDERY 130

[Close]
BLAST of Lsi03G000780 vs. Swiss-Prot
Match: FACR8_ARATH (Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana GN=FAR8 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.7e-35
Identity = 81/132 (61.36%), Postives = 104/132 (78.79%), Query Frame = 1 

Query: 1   MEFQGVLEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNT 60
           MEF  V  FL NK+I VTGATGFLAKV VEKILRVQPNV KLYL++RA+D +AAT+RL T
Sbjct: 1   MEFSCV-HFLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRT 60

Query: 61  EVIGKELFRVLKEKWG-ENFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIV 120
           E   K+LF+VL++  G E   +++SEK+V VAGDI+ + L +K+ S LRE +  +ID++V
Sbjct: 61  EAFEKDLFKVLRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKD-SNLRERMQKEIDIVV 120

Query: 121 NLAATTNFDERY 132
           N+AATTNFDERY
Sbjct: 121 NVAATTNFDERY 130

[Close]
BLAST of Lsi03G000780 vs. Swiss-Prot
Match: FACR3_ARATH (Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.7e-34
Identity = 78/131 (59.54%), Postives = 96/131 (73.28%), Query Frame = 1 

Query: 1   MEFQGVLEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNT 60
           ME   VL++L NKSI V GA GFLA + VEKILRV PNVKKLYLL+RA+  K+ATQR N 
Sbjct: 5   MEVVSVLKYLDNKSILVVGAAGFLANIFVEKILRVAPNVKKLYLLLRASKGKSATQRFND 64

Query: 61  EVIGKELFRVLKEKWGENFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIVN 120
           E++ K+LF+VLKEK+G N   + SEK+  V GDI  E L L+++  L  E+  Q+D IVN
Sbjct: 65  EILKKDLFKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFD-LAHEMIHQVDAIVN 124

Query: 121 LAATTNFDERY 132
           LAATT FDERY
Sbjct: 125 LAATTKFDERY 134

[Close]
BLAST of Lsi03G000780 vs. Swiss-Prot
Match: FACR1_ARATH (Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.1e-32
Identity = 73/126 (57.94%), Postives = 101/126 (80.16%), Query Frame = 1 

Query: 7   LEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNTEVIGKE 66
           ++FL NK+I +TGA GFLAKV+VEKILR+QPNVKK+YLL+RA DEK+A QRL +EV+  +
Sbjct: 6   VQFLGNKTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRSEVMEID 65

Query: 67  LFRVLKEKWGE-NFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIVNLAATT 126
           LF+VL+   GE N  +++ EK+V V GDIS + L LK+ + L + ++ +ID+I+N+AATT
Sbjct: 66  LFKVLRNNLGEDNLNALMREKIVPVPGDISIDNLGLKD-TDLIQRMWSEIDIIINIAATT 125

Query: 127 NFDERY 132
           NFDERY
Sbjct: 126 NFDERY 130

[Close]
BLAST of Lsi03G000780 vs. TrEMBL
Match: A0A0A0LV92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G145860 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.5e-61
Identity = 125/131 (95.42%), Postives = 129/131 (98.47%), Query Frame = 1 

Query: 1   MEFQGVLEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNT 60
           MEFQ VL+FLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRA DEKAATQRLNT
Sbjct: 1   MEFQSVLQFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRAADEKAATQRLNT 60

Query: 61  EVIGKELFRVLKEKWGENFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIVN 120
           +VIGKELFR+LKEKWGENFRSMISEKLVAVAGDIS+ELLVLKEYSKLREELYDQIDVIVN
Sbjct: 61  DVIGKELFRILKEKWGENFRSMISEKLVAVAGDISDELLVLKEYSKLREELYDQIDVIVN 120

Query: 121 LAATTNFDERY 132
           LAATTNFDERY
Sbjct: 121 LAATTNFDERY 131

[Close]
BLAST of Lsi03G000780 vs. TrEMBL
Match: M5WHQ7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004817mg PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.4e-43
Identity = 93/131 (70.99%), Postives = 110/131 (83.97%), Query Frame = 1 

Query: 1   MEFQGVLEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNT 60
           ME + +L+F+ NK+I VTGATGFLAK+ VEKILRVQPNVKKLYLL+RA D+K+ATQRL+ 
Sbjct: 1   MELESILQFIQNKNILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAADKKSATQRLHN 60

Query: 61  EVIGKELFRVLKEKWGENFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIVN 120
           E+IGK+LFRVL+EKWG    S++SEKL  V GDIS E L LK+ S LREE+  QIDVIVN
Sbjct: 61  EIIGKDLFRVLREKWGAGMNSIVSEKLTVVPGDISLEDLGLKD-SNLREEMLSQIDVIVN 120

Query: 121 LAATTNFDERY 132
           LAATTNFDERY
Sbjct: 121 LAATTNFDERY 130

[Close]
BLAST of Lsi03G000780 vs. TrEMBL
Match: A0A061GZR3_THECC (Jojoba acyl CoA reductase-related male sterility protein, putative OS=Theobroma cacao GN=TCM_041457 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.5e-42
Identity = 94/131 (71.76%), Postives = 107/131 (81.68%), Query Frame = 1 

Query: 1   MEFQGVLEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNT 60
           ME   VL+FL NKSIFV GATGFLAK+ VEKILRVQPNVKKLYLL+RA D K+ATQR + 
Sbjct: 43  MESGSVLQFLDNKSIFVIGATGFLAKIFVEKILRVQPNVKKLYLLLRAEDSKSATQRFHN 102

Query: 61  EVIGKELFRVLKEKWGENFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIVN 120
           E+IGKELF+VLKEKWG NF S ISEK+  V GDIS+E L LK  SKL +EL  ++DV+VN
Sbjct: 103 EIIGKELFKVLKEKWGNNFNSFISEKIAVVPGDISHEDLGLKN-SKLEKELRREVDVVVN 162

Query: 121 LAATTNFDERY 132
            AATTNFDERY
Sbjct: 163 SAATTNFDERY 172

[Close]
BLAST of Lsi03G000780 vs. TrEMBL
Match: I1LRE5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G087400 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.3e-41
Identity = 92/131 (70.23%), Postives = 108/131 (82.44%), Query Frame = 1 

Query: 1   MEFQGVLEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNT 60
           ME   +L FL +K+I +TGATGFLAKV++EKILRVQPNVKKLYLL+RA D K+AT RLN 
Sbjct: 1   MELGSILHFLQDKNILITGATGFLAKVLLEKILRVQPNVKKLYLLLRAADAKSATHRLNN 60

Query: 61  EVIGKELFRVLKEKWGENFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIVN 120
           E+IGK+LFRVLKEK G NF S +S+KL  V GDIS E L L++ S LREE+YDQ DVI+N
Sbjct: 61  EIIGKDLFRVLKEKLGANFNSFVSKKLTLVPGDISREDLGLED-SILREEIYDQTDVIIN 120

Query: 121 LAATTNFDERY 132
           LAATTNFDERY
Sbjct: 121 LAATTNFDERY 130

[Close]
BLAST of Lsi03G000780 vs. TrEMBL
Match: A0A0B2QI01_GLYSO (Fatty acyl-CoA reductase 3 OS=Glycine soja GN=glysoja_006610 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.3e-41
Identity = 92/131 (70.23%), Postives = 108/131 (82.44%), Query Frame = 1 

Query: 1   MEFQGVLEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNT 60
           ME   +L FL +K+I +TGATGFLAKV++EKILRVQPNVKKLYLL+RA D K+AT RLN 
Sbjct: 1   MELGSILHFLQDKNILITGATGFLAKVLLEKILRVQPNVKKLYLLLRAADAKSATHRLNN 60

Query: 61  EVIGKELFRVLKEKWGENFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIVN 120
           E+IGK+LFRVLKEK G NF S +S+KL  V GDIS E L L++ S LREE+YDQ DVI+N
Sbjct: 61  EIIGKDLFRVLKEKLGANFNSFVSKKLTLVPGDISREDLGLED-SILREEIYDQTDVIIN 120

Query: 121 LAATTNFDERY 132
           LAATTNFDERY
Sbjct: 121 LAATTNFDERY 130

[Close]
BLAST of Lsi03G000780 vs. TAIR10
Match: AT3G44550.1 (AT3G44550.1 fatty acid reductase 5)

HSP 1 Score: 149.4 bits (376), Expect = 1.5e-36
Identity = 78/126 (61.90%), Postives = 102/126 (80.95%), Query Frame = 1 

Query: 7   LEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNTEVIGKE 66
           ++FL NK+I VTGATGFLAKV VEKILRVQPNVKKLYLL+RA+D +AAT+RL TEV  KE
Sbjct: 6   VQFLRNKTILVTGATGFLAKVFVEKILRVQPNVKKLYLLVRASDNEAATKRLRTEVFEKE 65

Query: 67  LFRVLKEKWG-ENFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIVNLAATT 126
           LF+VL++  G E   +++ EK+V+V GDI+ + L + + S LRE +  +ID++VN+AATT
Sbjct: 66  LFKVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGIND-SHLRERMQKEIDIVVNVAATT 125

Query: 127 NFDERY 132
           NFDERY
Sbjct: 126 NFDERY 130

[Close]
BLAST of Lsi03G000780 vs. TAIR10
Match: AT3G44560.1 (AT3G44560.1 fatty acid reductase 8)

HSP 1 Score: 149.4 bits (376), Expect = 1.5e-36
Identity = 81/132 (61.36%), Postives = 104/132 (78.79%), Query Frame = 1 

Query: 1   MEFQGVLEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNT 60
           MEF  V  FL NK+I VTGATGFLAKV VEKILRVQPNV KLYL++RA+D +AAT+RL T
Sbjct: 1   MEFSCV-HFLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRT 60

Query: 61  EVIGKELFRVLKEKWG-ENFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIV 120
           E   K+LF+VL++  G E   +++SEK+V VAGDI+ + L +K+ S LRE +  +ID++V
Sbjct: 61  EAFEKDLFKVLRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKD-SNLRERMQKEIDIVV 120

Query: 121 NLAATTNFDERY 132
           N+AATTNFDERY
Sbjct: 121 NVAATTNFDERY 130

[Close]
BLAST of Lsi03G000780 vs. TAIR10
Match: AT4G33790.1 (AT4G33790.1 Jojoba acyl CoA reductase-related male sterility protein)

HSP 1 Score: 146.7 bits (369), Expect = 9.8e-36
Identity = 78/131 (59.54%), Postives = 96/131 (73.28%), Query Frame = 1 

Query: 1   MEFQGVLEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNT 60
           ME   VL++L NKSI V GA GFLA + VEKILRV PNVKKLYLL+RA+  K+ATQR N 
Sbjct: 5   MEVVSVLKYLDNKSILVVGAAGFLANIFVEKILRVAPNVKKLYLLLRASKGKSATQRFND 64

Query: 61  EVIGKELFRVLKEKWGENFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIVN 120
           E++ K+LF+VLKEK+G N   + SEK+  V GDI  E L L+++  L  E+  Q+D IVN
Sbjct: 65  EILKKDLFKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFD-LAHEMIHQVDAIVN 124

Query: 121 LAATTNFDERY 132
           LAATT FDERY
Sbjct: 125 LAATTKFDERY 134

[Close]
BLAST of Lsi03G000780 vs. TAIR10
Match: AT5G22500.1 (AT5G22500.1 fatty acid reductase 1)

HSP 1 Score: 139.8 bits (351), Expect = 1.2e-33
Identity = 73/126 (57.94%), Postives = 101/126 (80.16%), Query Frame = 1 

Query: 7   LEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNTEVIGKE 66
           ++FL NK+I +TGA GFLAKV+VEKILR+QPNVKK+YLL+RA DEK+A QRL +EV+  +
Sbjct: 6   VQFLGNKTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRSEVMEID 65

Query: 67  LFRVLKEKWGE-NFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIVNLAATT 126
           LF+VL+   GE N  +++ EK+V V GDIS + L LK+ + L + ++ +ID+I+N+AATT
Sbjct: 66  LFKVLRNNLGEDNLNALMREKIVPVPGDISIDNLGLKD-TDLIQRMWSEIDIIINIAATT 125

Query: 127 NFDERY 132
           NFDERY
Sbjct: 126 NFDERY 130

[Close]
BLAST of Lsi03G000780 vs. TAIR10
Match: AT3G44540.1 (AT3G44540.1 fatty acid reductase 4)

HSP 1 Score: 139.4 bits (350), Expect = 1.6e-33
Identity = 73/126 (57.94%), Postives = 100/126 (79.37%), Query Frame = 1 

Query: 7   LEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNTEVIGKE 66
           ++FLH+K+I VTG  GFLAKV VEKILR+QP VKKL+LL+RA D ++A QR ++EV+ K+
Sbjct: 6   IQFLHDKTILVTGVPGFLAKVFVEKILRIQPKVKKLFLLLRAADNESAMQRFHSEVLEKD 65

Query: 67  LFRVLKEKWG-ENFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIVNLAATT 126
           LFRVLK   G EN ++ I+EK+V + GDIS + L +K  S L + ++++ID+IVN+AATT
Sbjct: 66  LFRVLKNALGDENLKAFITEKVVPIPGDISVDNLGVKG-SDLLQHMWNEIDIIVNVAATT 125

Query: 127 NFDERY 132
           NFDERY
Sbjct: 126 NFDERY 130

[Close]
BLAST of Lsi03G000780 vs. NCBI nr
Match: gi|449443606|ref|XP_004139568.1| (PREDICTED: LOW QUALITY PROTEIN: fatty acyl-CoA reductase 3 [Cucumis sativus])

HSP 1 Score: 243.4 bits (620), Expect = 2.2e-61
Identity = 125/131 (95.42%), Postives = 129/131 (98.47%), Query Frame = 1 

Query: 1   MEFQGVLEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNT 60
           MEFQ VL+FLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRA DEKAATQRLNT
Sbjct: 1   MEFQSVLQFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRAADEKAATQRLNT 60

Query: 61  EVIGKELFRVLKEKWGENFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIVN 120
           +VIGKELFR+LKEKWGENFRSMISEKLVAVAGDIS+ELLVLKEYSKLREELYDQIDVIVN
Sbjct: 61  DVIGKELFRILKEKWGENFRSMISEKLVAVAGDISDELLVLKEYSKLREELYDQIDVIVN 120

Query: 121 LAATTNFDERY 132
           LAATTNFDERY
Sbjct: 121 LAATTNFDERY 131

[Close]
BLAST of Lsi03G000780 vs. NCBI nr
Match: gi|700209788|gb|KGN64884.1| (hypothetical protein Csa_1G145860 [Cucumis sativus])

HSP 1 Score: 243.4 bits (620), Expect = 2.2e-61
Identity = 125/131 (95.42%), Postives = 129/131 (98.47%), Query Frame = 1 

Query: 1   MEFQGVLEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNT 60
           MEFQ VL+FLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRA DEKAATQRLNT
Sbjct: 1   MEFQSVLQFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRAADEKAATQRLNT 60

Query: 61  EVIGKELFRVLKEKWGENFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIVN 120
           +VIGKELFR+LKEKWGENFRSMISEKLVAVAGDIS+ELLVLKEYSKLREELYDQIDVIVN
Sbjct: 61  DVIGKELFRILKEKWGENFRSMISEKLVAVAGDISDELLVLKEYSKLREELYDQIDVIVN 120

Query: 121 LAATTNFDERY 132
           LAATTNFDERY
Sbjct: 121 LAATTNFDERY 131

[Close]
BLAST of Lsi03G000780 vs. NCBI nr
Match: gi|659071834|ref|XP_008462137.1| (PREDICTED: fatty acyl-CoA reductase 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 235.0 bits (598), Expect = 7.8e-59
Identity = 120/131 (91.60%), Postives = 128/131 (97.71%), Query Frame = 1 

Query: 1   MEFQGVLEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNT 60
           MEFQ VL+FL NKSIFVTGATGFLAKVMVEKILRVQPNVKK+YLLIRA DEKAATQRLNT
Sbjct: 1   MEFQSVLQFLQNKSIFVTGATGFLAKVMVEKILRVQPNVKKIYLLIRAADEKAATQRLNT 60

Query: 61  EVIGKELFRVLKEKWGENFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIVN 120
           +VIGKELFR+LKEKWGENFR+MISEKLVAVAGDIS+ELLVLKEYS+LREELYDQIDVIV+
Sbjct: 61  DVIGKELFRILKEKWGENFRTMISEKLVAVAGDISDELLVLKEYSQLREELYDQIDVIVH 120

Query: 121 LAATTNFDERY 132
           LAATTNFDERY
Sbjct: 121 LAATTNFDERY 131

[Close]
BLAST of Lsi03G000780 vs. NCBI nr
Match: gi|659071836|ref|XP_008462145.1| (PREDICTED: fatty acyl-CoA reductase 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 235.0 bits (598), Expect = 7.8e-59
Identity = 120/131 (91.60%), Postives = 128/131 (97.71%), Query Frame = 1 

Query: 1   MEFQGVLEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNT 60
           MEFQ VL+FL NKSIFVTGATGFLAKVMVEKILRVQPNVKK+YLLIRA DEKAATQRLNT
Sbjct: 1   MEFQSVLQFLQNKSIFVTGATGFLAKVMVEKILRVQPNVKKIYLLIRAADEKAATQRLNT 60

Query: 61  EVIGKELFRVLKEKWGENFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIVN 120
           +VIGKELFR+LKEKWGENFR+MISEKLVAVAGDIS+ELLVLKEYS+LREELYDQIDVIV+
Sbjct: 61  DVIGKELFRILKEKWGENFRTMISEKLVAVAGDISDELLVLKEYSQLREELYDQIDVIVH 120

Query: 121 LAATTNFDERY 132
           LAATTNFDERY
Sbjct: 121 LAATTNFDERY 131

[Close]
BLAST of Lsi03G000780 vs. NCBI nr
Match: gi|645218087|ref|XP_008228919.1| (PREDICTED: fatty acyl-CoA reductase 3-like isoform X2 [Prunus mume])

HSP 1 Score: 182.6 bits (462), Expect = 4.6e-43
Identity = 93/131 (70.99%), Postives = 110/131 (83.97%), Query Frame = 1 

Query: 1   MEFQGVLEFLHNKSIFVTGATGFLAKVMVEKILRVQPNVKKLYLLIRATDEKAATQRLNT 60
           ME + +L+F+ NK+I VTGATGFLAK+ VEKILRVQPNVKKLYLL+RA D K+ATQRL+ 
Sbjct: 1   MELESILQFIQNKNILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAVDTKSATQRLHN 60

Query: 61  EVIGKELFRVLKEKWGENFRSMISEKLVAVAGDISNELLVLKEYSKLREELYDQIDVIVN 120
           E+IGK+LFRVL+EKWG    S++SEKL  V GDIS+E L LK+ S LREE+  QIDVIVN
Sbjct: 61  EIIGKDLFRVLREKWGAGMNSIVSEKLTVVPGDISHEDLGLKD-SNLREEMLSQIDVIVN 120

Query: 121 LAATTNFDERY 132
           LAATTNFDERY
Sbjct: 121 LAATTNFDERY 130

The following BLAST results are available for this feature:
BLAST of Lsi03G000780 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FAR_SIMCH6.4e-3762.31Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis PE=1 SV=1[more]
FACR5_ARATH2.7e-3561.90Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana GN=FAR5 PE=2 SV=1[more]
FACR8_ARATH2.7e-3561.36Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana GN=FAR8 PE=2 SV=1[more]
FACR3_ARATH1.7e-3459.54Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1[more]
FACR1_ARATH2.1e-3257.94Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2 SV=1[more]
BLAST of Lsi03G000780 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LV92_CUCSA1.5e-6195.42Uncharacterized protein OS=Cucumis sativus GN=Csa_1G145860 PE=4 SV=1[more]
M5WHQ7_PRUPE5.4e-4370.99Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004817mg PE=4 SV=1[more]
A0A061GZR3_THECC3.5e-4271.76Jojoba acyl CoA reductase-related male sterility protein, putative OS=Theobroma ... [more]
I1LRE5_SOYBN1.3e-4170.23Uncharacterized protein OS=Glycine max GN=GLYMA_12G087400 PE=4 SV=1[more]
A0A0B2QI01_GLYSO1.3e-4170.23Fatty acyl-CoA reductase 3 OS=Glycine soja GN=glysoja_006610 PE=4 SV=1[more]
BLAST of Lsi03G000780 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G44550.11.5e-3661.90 fatty acid reductase 5[more]
AT3G44560.11.5e-3661.36 fatty acid reductase 8[more]
AT4G33790.19.8e-3659.54 Jojoba acyl CoA reductase-related male sterility protein[more]
AT5G22500.11.2e-3357.94 fatty acid reductase 1[more]
AT3G44540.11.6e-3357.94 fatty acid reductase 4[more]
BLAST of Lsi03G000780 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443606|ref|XP_004139568.1|2.2e-6195.42PREDICTED: LOW QUALITY PROTEIN: fatty acyl-CoA reductase 3 [Cucumis sativus][more]
gi|700209788|gb|KGN64884.1|2.2e-6195.42hypothetical protein Csa_1G145860 [Cucumis sativus][more]
gi|659071834|ref|XP_008462137.1|7.8e-5991.60PREDICTED: fatty acyl-CoA reductase 3-like isoform X1 [Cucumis melo][more]
gi|659071836|ref|XP_008462145.1|7.8e-5991.60PREDICTED: fatty acyl-CoA reductase 3-like isoform X2 [Cucumis melo][more]
gi|645218087|ref|XP_008228919.1|4.6e-4370.99PREDICTED: fatty acyl-CoA reductase 3-like isoform X2 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0080019fatty-acyl-CoA reductase (alcohol-forming) activity
Vocabulary: INTERPRO
TermDefinition
IPR026055FAR
IPR016040NAD(P)-bd_dom
IPR013120Male_sterile_NAD-bd
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035336 long-chain fatty-acyl-CoA metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0010345 suberin biosynthetic process
biological_process GO:0010025 wax biosynthetic process
cellular_component GO:0005783 endoplasmic reticulum
molecular_function GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G000780.1Lsi03G000780.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013120Male sterility, NAD-bindingPFAMPF07993NAD_binding_4coord: 17..132
score: 3.9
IPR016040NAD(P)-binding domainGENE3DG3DSA:3.40.50.720coord: 8..129
score: 3.0
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 77..130
score: 5.12E-12coord: 5..49
score: 5.12
IPR026055Fatty acyl-CoA reductasePANTHERPTHR11011MALE STERILITY PROTEIN 2-RELATEDcoord: 1..131
score: 8.0
NoneNo IPR availablePANTHERPTHR11011:SF25FATTY ACYL-COA REDUCTASE 3-RELATEDcoord: 1..131
score: 8.0