Lsi03G000400 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G000400
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	NADH-ubiquinone oxidoreductase chain 1
Location	chr03 : 713825 .. 714851 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTTGTGCAACGTCGAAAGGGTCCTGATGTAGTGGGATCGTTCGGATTGTTACAACCTCTAGCAGATGGTTTGAAATTGATTCTAAAAGAACCTCTTTCACCAAGTAGTGCTAATTTCTCCCTTTTTAGAATGGCTCCAGTGGCTACATTTATGTTAAGTCTGGTCGCTCGGGCCGTTGTACCTTTTGATTATGGTATGGTATTGTCAGATCCGAACATAGGGCTACTTTATTTGTTTGCCATATCTTCGCTAGGTGTTTATGGAATTATTATAGCGGGTTGGTCTAGTAATTAGGGGGCGGCCGTTCGGTCGCCTATGATACTAGGACCAATAGGTCAAAAATGGGTTTGTGCCGCAGGTGTTGAACGATCTACTCTACACAGGTGTGGGCTTACAGGGCTAGGGCTCATAAACCCTTTCTTTCATTCATCAATAGGGCCCTGGTCGGTCACTTTTCCGGGCCGGGATCGATAAGTGGAAGTCATAAAAAAGAGATCTTTCTCTTCGTACCTCAGATCAAGAGGAAGGGTAGCTTCTTAAGCTGGCCTATATATATTTATATATATAAAAAGATTCGCTGTCTTTTAACCGTCTGTTCTTCTTTGTCAACGCTACGTTGGACCTAAAGGAAAAGGCGCTACTTAGCCCTACATTAGTAGAAGTAAGCGGCTGAGTTAGCCTAGCCTACCCTACTAATGTATTGTATAGTAGGGTATAGTAGGCGAGCGAGTTAGCGAAGACGCTTAGGCTAATAGATAAGAGAGCGTCGGTGCGTAGCCTTCATTCTACTACGCTACGCAAAGGTTACGAAGTCACTTAGCTCGACGTTAGGAGAGTCAAGTCAAGGGGGAACGCCATACCTACATAGAAGAACCGCTGTTCGTTGACTTTCTAAGGTCTAACCTTTCGCTCCCCTACTGAAAAGGAGCAAAGCAGCTTCGCACCACTGATAGACTACTTAAGATTCAATTCAAAAGGTCCTACTTAGTTTCGTAAGCCTTTGTCATTGTCAGTCAACTAA

mRNA sequence

ATGGCTTTTGTGCAACGTCGAAAGGGTCCTGATGTAGTGGGATCGTTCGGATTGTTACAACCTCTAGCAGATGGTTTGAAATTGATTCTAAAAGAACCTCTTTCACCAAGTAGTGCTAATTTCTCCCTTTTTAGAATGGCTCCAGTGGCTACATTTATGTTAAGTCTGGTCGCTCGGGCCGTTGTACCTTTTGATTATGGTATGGTGTGGGCTTACAGGGCTAGGGCTCATAAACCCTTTCTTTCATTCATCAATAGGGCCCTGGTCGGTCACTTTTCCGGGCCGGGATCGATAAGTGGAAGTCATAAAAAAGAGATCTTTCTCTTCGTACCTCAGATCAAGAGGAAGGGTAGCTTCTTAAGCTGGCCTATATATATTTATATATATAAAAAGATTCGCTGTCTTTTAACCGTCTGTTCTTCTTTGTCAACGCTACTAGGGTATAGTAGGCGAGCGATCAACTAA

Coding sequence (CDS)

ATGGCTTTTGTGCAACGTCGAAAGGGTCCTGATGTAGTGGGATCGTTCGGATTGTTACAACCTCTAGCAGATGGTTTGAAATTGATTCTAAAAGAACCTCTTTCACCAAGTAGTGCTAATTTCTCCCTTTTTAGAATGGCTCCAGTGGCTACATTTATGTTAAGTCTGGTCGCTCGGGCCGTTGTACCTTTTGATTATGGTATGGTGTGGGCTTACAGGGCTAGGGCTCATAAACCCTTTCTTTCATTCATCAATAGGGCCCTGGTCGGTCACTTTTCCGGGCCGGGATCGATAAGTGGAAGTCATAAAAAAGAGATCTTTCTCTTCGTACCTCAGATCAAGAGGAAGGGTAGCTTCTTAAGCTGGCCTATATATATTTATATATATAAAAAGATTCGCTGTCTTTTAACCGTCTGTTCTTCTTTGTCAACGCTACTAGGGTATAGTAGGCGAGCGATCAACTAA

Protein sequence

MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARAVVPFDYGMVWAYRARAHKPFLSFINRALVGHFSGPGSISGSHKKEIFLFVPQIKRKGSFLSWPIYIYIYKKIRCLLTVCSSLSTLLGYSRRAIN

Homology

[Close]

BLAST of Lsi03G000400 vs. Swiss-Prot
Match: NU1M_PETHY (NADH-ubiquinone oxidoreductase chain 1 OS=Petunia hybrida GN=ND1 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.7e-31
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARA 60
          MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEP+SPSSANFSLFRMAPVATFMLSLVARA
Sbjct: 31 MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 90

Query: 61 VVPFDYGMV 70
          VVPFDYGMV
Sbjct: 91 VVPFDYGMV 99

[Close]

BLAST of Lsi03G000400 vs. Swiss-Prot
Match: NU1M_OENBE (NADH-ubiquinone oxidoreductase chain 1 OS=Oenothera berteroana GN=ND1 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 4.0e-30
Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 1


Query: 1   MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARA 60
           MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEP+SPSSANFSLFRMAPVATFMLSLVA A
Sbjct: 37  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVAWA 96

Query: 61  VVPFDYGMV 70
           VVPFDYGMV
Sbjct: 97  VVPFDYGMV 105

[Close]

BLAST of Lsi03G000400 vs. Swiss-Prot
Match: NU1M_WHEAT (NADH-ubiquinone oxidoreductase chain 1 OS=Triticum aestivum GN=ND1 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.0e-29
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 1


Query: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARA 60
          MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEP+SPSSANF LFRMAPVATFMLSLVA A
Sbjct: 31 MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFFLFRMAPVATFMLSLVAWA 90

Query: 61 VVPFDYGMV 70
          VVPFDYGMV
Sbjct: 91 VVPFDYGMV 99

[Close]

BLAST of Lsi03G000400 vs. Swiss-Prot
Match: NU1M_ARATH (NADH-ubiquinone oxidoreductase chain 1 OS=Arabidopsis thaliana GN=ND1 PE=2 SV=4)

HSP 1 Score: 130.2 bits (326), Expect = 2.0e-29
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 1


Query: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARA 60
          MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEP+SPSSANF LFRMAPVATFMLSLVA A
Sbjct: 31 MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFFLFRMAPVATFMLSLVAWA 90

Query: 61 VVPFDYGMV 70
          VVPFDYGMV
Sbjct: 91 VVPFDYGMV 99

[Close]

BLAST of Lsi03G000400 vs. Swiss-Prot
Match: NU1M_MARPO (NADH-ubiquinone oxidoreductase chain 1 OS=Marchantia polymorpha GN=ND1 PE=3 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 4.4e-21
Identity = 50/71 (70.42%), Postives = 60/71 (84.51%), Query Frame = 1


Query: 1   MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARA 60
           MA +QRRKGP+VVG  GLLQPLADGLKL++KEP+ PSSAN  +F MAPV TF L+L A A
Sbjct: 34  MASMQRRKGPNVVGILGLLQPLADGLKLMIKEPILPSSANIFIFLMAPVLTFTLALCAWA 93

Query: 61  VVPFDYGMVWA 72
           V+PFDYGMV++
Sbjct: 94  VIPFDYGMVFS 104

[Close]

BLAST of Lsi03G000400 vs. TrEMBL
Match: V5NAJ0_AJURE (NADH-ubiquinone oxidoreductase chain 1 OS=Ajuga reptans GN=nad1 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.2e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARA 60
          MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEP+SPSSANFSLFRMAPVATFMLSLVARA
Sbjct: 31 MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 90

Query: 61 VVPFDYGMV 70
          VVPFDYGMV
Sbjct: 91 VVPFDYGMV 99

[Close]

BLAST of Lsi03G000400 vs. TrEMBL
Match: M1FN34_SOYBN (NADH-ubiquinone oxidoreductase chain 1 OS=Glycine max GN=nad1 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.2e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARA 60
          MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEP+SPSSANFSLFRMAPVATFMLSLVARA
Sbjct: 31 MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 90

Query: 61 VVPFDYGMV 70
          VVPFDYGMV
Sbjct: 91 VVPFDYGMV 99

[Close]

BLAST of Lsi03G000400 vs. TrEMBL
Match: A0A096XF93_PANGI (NADH-ubiquinone oxidoreductase chain 1 OS=Panax ginseng GN=nad1 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.2e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARA 60
          MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEP+SPSSANFSLFRMAPVATFMLSLVARA
Sbjct: 31 MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 90

Query: 61 VVPFDYGMV 70
          VVPFDYGMV
Sbjct: 91 VVPFDYGMV 99

[Close]

BLAST of Lsi03G000400 vs. TrEMBL
Match: I1TIH7_DAUCA (NADH-ubiquinone oxidoreductase chain 1 OS=Daucus carota subsp. sativus GN=nad1 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.2e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARA 60
          MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEP+SPSSANFSLFRMAPVATFMLSLVARA
Sbjct: 31 MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 90

Query: 61 VVPFDYGMV 70
          VVPFDYGMV
Sbjct: 91 VVPFDYGMV 99

[Close]

BLAST of Lsi03G000400 vs. TrEMBL
Match: A0A096XFB4_PANGI (NADH-ubiquinone oxidoreductase chain 1 OS=Panax ginseng GN=orf108b PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.2e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARA 60
          MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEP+SPSSANFSLFRMAPVATFMLSLVARA
Sbjct: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 60

Query: 61 VVPFDYGMV 70
          VVPFDYGMV
Sbjct: 61 VVPFDYGMV 69

[Close]

BLAST of Lsi03G000400 vs. TAIR10
Match: AT2G07785.1 (AT2G07785.1 NADH dehydrogenase family protein)

HSP 1 Score: 131.0 bits (328), Expect = 6.5e-31
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 1


Query: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARA 60
          MAFVQRRKGPDVVGSFGLLQPLADG KLILKEP+SPSSANF LFRMAPVATFMLSLVARA
Sbjct: 1  MAFVQRRKGPDVVGSFGLLQPLADGSKLILKEPISPSSANFFLFRMAPVATFMLSLVARA 60

Query: 61 VVPFDYGMV 70
          VVPFDYGMV
Sbjct: 61 VVPFDYGMV 69

[Close]

BLAST of Lsi03G000400 vs. TAIR10
Match: ATMG01120.1 (ATMG01120.1 NADH dehydrogenase 1B)

HSP 1 Score: 131.0 bits (328), Expect = 6.5e-31
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 1


Query: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARA 60
          MAFVQRRKGPDVVGSFGLLQPLADG KLILKEP+SPSSANF LFRMAPVATFMLSLVARA
Sbjct: 31 MAFVQRRKGPDVVGSFGLLQPLADGSKLILKEPISPSSANFFLFRMAPVATFMLSLVARA 90

Query: 61 VVPFDYGMV 70
          VVPFDYGMV
Sbjct: 91 VVPFDYGMV 99

[Close]

BLAST of Lsi03G000400 vs. TAIR10
Match: ATMG00516.1 (ATMG00516.1 NADH dehydrogenase 1C)

HSP 1 Score: 131.0 bits (328), Expect = 6.5e-31
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 1


Query: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARA 60
          MAFVQRRKGPDVVGSFGLLQPLADG KLILKEP+SPSSANF LFRMAPVATFMLSLVARA
Sbjct: 31 MAFVQRRKGPDVVGSFGLLQPLADGSKLILKEPISPSSANFFLFRMAPVATFMLSLVARA 90

Query: 61 VVPFDYGMV 70
          VVPFDYGMV
Sbjct: 91 VVPFDYGMV 99

[Close]

BLAST of Lsi03G000400 vs. TAIR10
Match: ATMG01275.1 (ATMG01275.1 NADH dehydrogenase 1A)

HSP 1 Score: 131.0 bits (328), Expect = 6.5e-31
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 1


Query: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARA 60
          MAFVQRRKGPDVVGSFGLLQPLADG KLILKEP+SPSSANF LFRMAPVATFMLSLVARA
Sbjct: 31 MAFVQRRKGPDVVGSFGLLQPLADGSKLILKEPISPSSANFFLFRMAPVATFMLSLVARA 90

Query: 61 VVPFDYGMV 70
          VVPFDYGMV
Sbjct: 91 VVPFDYGMV 99

[Close]

BLAST of Lsi03G000400 vs. TAIR10
Match: ATCG01100.1 (ATCG01100.1 NADH dehydrogenase family protein)

HSP 1 Score: 58.5 bits (140), Expect = 4.1e-09
Identity = 30/70 (42.86%), Postives = 42/70 (60.00%), Query Frame = 1


Query: 2   AFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARAV 61
           A +Q+R GP+  G  G+LQ LADG KL+ KE L PS  N  LF + P    +  L++ +V
Sbjct: 56  AGIQQRIGPEYAGPLGILQALADGTKLLFKENLRPSRGNTPLFSIGPSIAVISILLSYSV 115

Query: 62  VPFDYGMVWA 72
           +PF   +V A
Sbjct: 116 IPFSNHLVLA 125

[Close]

BLAST of Lsi03G000400 vs. NCBI nr
Match: gi|903844|gb|AAA70292.1| (NADH dehydrogenase (ubiquinone) (mitochondrion) [Oenothera berteroana])

HSP 1 Score: 135.6 bits (340), Expect = 7.5e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1   MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARA 60
           MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEP+SPSSANFSLFRMAPVATFMLSLVARA
Sbjct: 37  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 96

Query: 61  VVPFDYGMV 70
           VVPFDYGMV
Sbjct: 97  VVPFDYGMV 105

[Close]

BLAST of Lsi03G000400 vs. NCBI nr
Match: gi|675895168|ref|YP_009049642.1| (NADH dehydrogenase subunit 1 (mitochondrion) [Capsicum annuum])

HSP 1 Score: 135.6 bits (340), Expect = 7.5e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARA 60
          MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEP+SPSSANFSLFRMAPVATFMLSLVARA
Sbjct: 31 MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 90

Query: 61 VVPFDYGMV 70
          VVPFDYGMV
Sbjct: 91 VVPFDYGMV 99

[Close]

BLAST of Lsi03G000400 vs. NCBI nr
Match: gi|323149040|ref|YP_004222803.1| (NADH dehydrogenase subunit 1 [Vigna radiata])

HSP 1 Score: 135.6 bits (340), Expect = 7.5e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARA 60
          MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEP+SPSSANFSLFRMAPVATFMLSLVARA
Sbjct: 31 MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 90

Query: 61 VVPFDYGMV 70
          VVPFDYGMV
Sbjct: 91 VVPFDYGMV 99

[Close]

BLAST of Lsi03G000400 vs. NCBI nr
Match: gi|57013995|ref|YP_173351.1| (NADH dehydrogenase subunit 1 [Nicotiana tabacum])

HSP 1 Score: 135.6 bits (340), Expect = 7.5e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARA 60
          MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEP+SPSSANFSLFRMAPVATFMLSLVARA
Sbjct: 31 MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 90

Query: 61 VVPFDYGMV 70
          VVPFDYGMV
Sbjct: 91 VVPFDYGMV 99

[Close]

BLAST of Lsi03G000400 vs. NCBI nr
Match: gi|756762127|gb|AJM70235.1| (NADH dehydrogenase subunit 1, partial (mitochondrion) [Nicotiana tabacum/Hyoscyamus niger cybrid])

HSP 1 Score: 135.6 bits (340), Expect = 7.5e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPLSPSSANFSLFRMAPVATFMLSLVARA 60
          MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEP+SPSSANFSLFRMAPVATFMLSLVARA
Sbjct: 31 MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 90

Query: 61 VVPFDYGMV 70
          VVPFDYGMV
Sbjct: 91 VVPFDYGMV 99

The following BLAST results are available for this feature:

BLAST of Lsi03G000400 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NU1M_PETHY	4.7e-31	98.55	NADH-ubiquinone oxidoreductase chain 1 OS=Petunia hybrida GN=ND1 PE=3 SV=1	[more]
NU1M_OENBE	4.0e-30	97.10	NADH-ubiquinone oxidoreductase chain 1 OS=Oenothera berteroana GN=ND1 PE=2 SV=1	[more]
NU1M_WHEAT	2.0e-29	95.65	NADH-ubiquinone oxidoreductase chain 1 OS=Triticum aestivum GN=ND1 PE=2 SV=1	[more]
NU1M_ARATH	2.0e-29	95.65	NADH-ubiquinone oxidoreductase chain 1 OS=Arabidopsis thaliana GN=ND1 PE=2 SV=4	[more]
NU1M_MARPO	4.4e-21	70.42	NADH-ubiquinone oxidoreductase chain 1 OS=Marchantia polymorpha GN=ND1 PE=3 SV=2	[more]

BLAST of Lsi03G000400 vs. TrEMBL


Match Name	E-value	Identity	Description
V5NAJ0_AJURE	5.2e-29	98.55	NADH-ubiquinone oxidoreductase chain 1 OS=Ajuga reptans GN=nad1 PE=3 SV=1	[more]
M1FN34_SOYBN	5.2e-29	98.55	NADH-ubiquinone oxidoreductase chain 1 OS=Glycine max GN=nad1 PE=3 SV=1	[more]
A0A096XF93_PANGI	5.2e-29	98.55	NADH-ubiquinone oxidoreductase chain 1 OS=Panax ginseng GN=nad1 PE=3 SV=1	[more]
I1TIH7_DAUCA	5.2e-29	98.55	NADH-ubiquinone oxidoreductase chain 1 OS=Daucus carota subsp. sativus GN=nad1 P...	[more]
A0A096XFB4_PANGI	5.2e-29	98.55	NADH-ubiquinone oxidoreductase chain 1 OS=Panax ginseng GN=orf108b PE=3 SV=1	[more]

BLAST of Lsi03G000400 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G07785.1	6.5e-31	95.65	NADH dehydrogenase family protein	[more]
ATMG01120.1	6.5e-31	95.65	ATMG01120.1 NADH dehydrogenase 1B	[more]
ATMG00516.1	6.5e-31	95.65	ATMG00516.1 NADH dehydrogenase 1C	[more]
ATMG01275.1	6.5e-31	95.65	ATMG01275.1 NADH dehydrogenase 1A	[more]
ATCG01100.1	4.1e-09	42.86	ATCG01100.1 NADH dehydrogenase family protein	[more]

BLAST of Lsi03G000400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|903844\|gb\|AAA70292.1\|	7.5e-29	98.55	NADH dehydrogenase (ubiquinone) (mitochondrion) [Oenothera berteroana]	[more]
gi\|675895168\|ref\|YP_009049642.1\|	7.5e-29	98.55	NADH dehydrogenase subunit 1 (mitochondrion) [Capsicum annuum]	[more]
gi\|323149040\|ref\|YP_004222803.1\|	7.5e-29	98.55	NADH dehydrogenase subunit 1 [Vigna radiata]	[more]
gi\|57013995\|ref\|YP_173351.1\|	7.5e-29	98.55	NADH dehydrogenase subunit 1 [Nicotiana tabacum]	[more]
gi\|756762127\|gb\|AJM70235.1\|	7.5e-29	98.55	NADH dehydrogenase subunit 1, partial (mitochondrion) [Nicotiana tabacum/Hyoscya...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR018086	NADH_UbQ_OxRdtase_su1_CS
IPR001694	NADH_UbQ_OxRdtase_su1/FPO

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0015992	proton transport
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G000400.1	Lsi03G000400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	PANTHER	PTHR11432	NADH DEHYDROGENASE SUBUNIT 1	coord: 1..69 score: 2.2
IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	PFAM	PF00146	NADHdh	coord: 1..66 score: 2.1
IPR018086	NADH:ubiquinone oxidoreductase, subunit 1, conserved site	PROSITE	PS00667	COMPLEX1_ND1_1	coord: 17..32 scor

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G000400	Cucurbita moschata (Rifu)	cmolsiB203
Lsi03G000400	Cucurbita moschata (Rifu)	cmolsiB510
Lsi03G000400	Cucurbita pepo (Zucchini)	cpelsiB242
Lsi03G000400	Cucurbita pepo (Zucchini)	cpelsiB429
Lsi03G000400	Wild cucumber (PI 183967)	cpilsiB046
Lsi03G000400	Wild cucumber (PI 183967)	cpilsiB456
Lsi03G000400	Cucumber (Chinese Long) v2	culsiB044
Lsi03G000400	Cucumber (Chinese Long) v2	culsiB449
Lsi03G000400	Melon (DHL92) v3.5.1	lsimeB243
Lsi03G000400	Melon (DHL92) v3.5.1	lsimeB244
Lsi03G000400	Watermelon (Charleston Gray)	lsiwcgB230
Lsi03G000400	Watermelon (Charleston Gray)	lsiwcgB237
Lsi03G000400	Watermelon (97103) v1	lsiwmB263
Lsi03G000400	Watermelon (97103) v1	lsiwmB274
Lsi03G000400	Cucumber (Gy14) v2	cgyblsiB041
Lsi03G000400	Cucumber (Gy14) v2	cgyblsiB415
Lsi03G000400	Melon (DHL92) v3.6.1	lsimedB254
Lsi03G000400	Melon (DHL92) v3.6.1	lsimedB255
Lsi03G000400	Silver-seed gourd	carlsiB149
Lsi03G000400	Silver-seed gourd	carlsiB310
Lsi03G000400	Cucumber (Chinese Long) v3	cuclsiB048
Lsi03G000400	Cucumber (Chinese Long) v3	cuclsiB478
Lsi03G000400	Watermelon (97103) v2	lsiwmbB216
Lsi03G000400	Watermelon (97103) v2	lsiwmbB231
Lsi03G000400	Wax gourd	lsiwgoB337
Lsi03G000400	Bottle gourd (USVL1VR-Ls)	lsilsiB041
Lsi03G000400	Cucumber (Gy14) v1	cgylsiB353
Lsi03G000400	Cucurbita maxima (Rimu)	cmalsiB212
Lsi03G000400	Cucurbita maxima (Rimu)	cmalsiB525