Lsi03G000300 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCTCTAGAGATTGGAACATGGGGAAGCTCTTGTGCTCTTTCTTCTTTTCCATTCTTTTGCTTTCATTTAAGGCAATATCCCAAGAAGTTGGTGAGACTCCTAAATTATGAAATGATTTTTTTTTGTTTGAAACGTTTTAATTATTTATGGTGCGTTTGGATTGACTTTCTAAGTGTTTATAAGTGCAAAAAAACGTGTTTATAAACACTTAGAAAGTCAATCCAAACATGCCCTTAGTCTCTGTTGAGATTCCCGCACTAGAAAAATCAAAGGCACCTCATAATGTTTATAAGATACATGTGTTACTCCTCTTATTACTAATTAATTTTGAGATAGAACTATATGTTATCTAATATGGTAACGAAGTCTATGAAGCCTAAACGGACATTTCGTCCATAATGGTGAACTCAAAGAGGCCTCATCTTGAGGGATATATATTGGTGTATCCCAAATTGAAAAAAAAGTTAAGAGATCTCACAATCTTTCGAAAGATACACGAGCTACTTCTCTTATTGTCAATTGATTTTGAGATGAAACTCCCTATTATCTAATAGTTTCACACGTTTTAACATTTTTCAATTATACTCTGTATCTTAGTGAATGTTAAATGTTGTTGATAATATGAGTACGTAGTAAATGAGAATAATACTTATGGTGTATTTGAACTGACTTTCTAAGTGTTTAAATAAGTGTTTATAAGTGTAAAAAAATATTTATAAACACTTTGAAAGTCATTTTAAACTGGCTAATAGTGAATTGGTATAAAATTTGGCCTTCAAAATATATATATATATATATATATATATATATATTACAAACTGTATTATTATTATTATCATCATCATCATTTATTATTGGGTTTAAGGATTATGATATTGTTTATGCAGATGATGAAAGAGGGTTTGATTATGAAAGAGATGGGGAAAAAGGACCAATTCATTGGGGAGAGCTTAGACCAGAGTGGCATACATGTAAGGCTGGGTTAATGCAATCTCCAATTGATTTATTGCATGAGAGAGTTGAAGTTATTTCACACTTGGGAGACCTTAAAATCAACTACAAATCCTCTAATGCCACACTCAAGAATAGAGGCCATGATATGATGGTAATTATATTTTCTTTCCCTTTTTAGAATGATTAAAAGTGCTTTTTGTTATATATAAAATCACTCTCTAACATATTTTTAATCATTCAAAACTACACAAATTACATATAGAAGTATATTAAATCAAATATGTTAAATTGATTTTGAATAATTAAAGACGTGTCCCTGAGTAATTTTAAATAAGGAAAAAAAACCTTTTTCGATCTCTAGGTTTTAGACCTAGTTTCCATTTGGTCCCTATGTTTCAAAATAGTACACTCTTAATTCTTAAGTTTTGATTTTGATTTCAATTTAGACTTTTTAAGTTTCAAAATGTTATAAATTTACCTCTGAGATCTAAATTTTGTTTTAATTTGATCTCTAAGTTTGAAAACTTACACTTTTAACCTCAGTTTGATCTCTAGGTTTGTTATAAAAATATTTTTTAAAAAAGTCATTTTTATTTAAACTATTTTGATTAAAACGGTTTAAAATACACTTTAAAAGTGTTTCAAAAGCTATATTGAGAGGTTGTCAAACACTTCAATTTTTTCTAAAATGACTTTATCTTCAAAATTAAACATTTTCAAATTAAACCAAACACACCCTTACACTTTTTAGTAACATTAATTATTCACTAAATACTCACTTTAATCTTTAGCATTAATGTCTATTCATTAATTTAAAATAATTAAAATAAAAATAATTTTAATCATTTTAAAATCGCTAGCTTATAAGCGAAACTATTTTGATTATATAGATGAAATGGGTGGATGGAGGTGGATTCATGGAAATGAATGGAACTCAATATAAACTAAAACAATGTCATTGGCACTCACCTTCCGAGCACACCATTGATGGCAAGAAGTTTGATCTTGAAGCTCACTTAGTCCATGAAAGCTCAAACGGCATGATTTCTGTCATCGGAATCTTGTATCAGATTGGAGAACCTGATTACTTTTTATCAATGGTGAGTTTAATGTATAACCGAGTTGATCTGTTGCATAAACAAGTTGAATTTTGTTTCATGTTTTTAAATTCATCGAGTTTAACAAATATGGATTCGACAAATGTATTTTTTTTAAAACTACTCTTAGATTATTCTATGATCTAAATAGTGCAGGTTCTAGAACCAATTTTTATGTTTGATTTTGAATTTTTGAAGAATTATATTAAAATAGATAAAAATTACTTGAATTAAATATAGTATTTTGATGTAATAAAATACTCAATTCATTTTTTTTTGTCTAATTAAAATGTGAATAATATAATATATTATAAATTATATGATATTATATTGTAAAATAATAATTGTACAACTGTGTTTTAGGGTAATTTTGTTTTAAATGACAAAGCTATTGAAAATATTTTTAAATATAGCAAATGTTTATCAATGATGGACAGTGATACACATCTATCATCTATCACTTGTCTATTAGTGATAGACAGTGATACACATCTATCATCTATCAATGTCTATCAGTGATAGACATTAATAGATGTTTATCAATGTTTATTACTGTCTATCACTGATAGATAGTGACATTTTAAATAAGTTAGCTCATTTTGTTATATTTGAAAACAACCCATTTTTTTATTATTATAAAACACAAATTAATTAACAATATTTTATATTAAACTTAATATCTAGTGGATAACCACAACCAATTTTATGATTTATAAATATATATTACATCAAATACATTTTGAACTATTGCTTAAATGAGATTCATTTTCTGAACATGCTATCGAACATAAACTCAAAAATATGAAATACAACTGTGCTTTCATTCAATTCTTTGTTTTCAGATTTATGTTTTCGGGTATGGACTTACCAACAAATCCTAATATTGTGGGAAAATTTGAATTCACATTGTTTCAATCTCATTGTATCAGATTGAAGATCATTTAGAACTGGCCTCAGATACCCATGAAGAAGAGAGAGTGATTGGAATAATTGATCCAAATCTGTTGAAGATGGGTAGCAAACAATATTATAGATACATAGGCTCACTTACTGTTCCACCATGCACTGAAAATGTGATGTGGACTATGATTCACCAGGTACATTTCTTCAATACTTAGTATGTTATATTATTAATATGTTTTTAAATATAGCAAAATGAGTTAAAATATTTATAAATATAGCAAAATGTCATTGTCTATCACTAATAGAAACTGATAGCATTTATCATGGTCTATCATTGTCTACACTGATAGACAGTGATATTTTGCTATATTTGTAAATATTTCCAGCAGTTTTGCCATTTAAAACAATTACTTATATATATAATTCAAATAGTTTATGTTTTTTTTTTTTTAGAGTATGGAGATTGTGGATTTAAATCTATAATTTTCCTGATCGAAGATATATATTGTATGCCACTTGCATGTCTTTGAGTCTTTTTGTAAATCAAAATTGATATTTTTGTATTATTTGAGTGTGCTAAAAATTAAATTGAGAATATCCTCTCTTTTGTTTTTACTTTTTATACTCTTTTAAAAGATAGATCTTGTTTGATAACTATTTGACTTTTTATTTTTGATTTTGAAAATTAAGCCTATAAATTATACTTTTCACCTCTAAATTCTTATGTTATATTGTGCACATATTACAAATATTTTCATAAACCAACAAGTAATTTTTAAAAATTGGTTTTTGTTTTTCGATTTTAGACTAAGAATTCTAATGTTTCTTTAATAAAAGTAAAAATAATGAAAAAAAAATTGAGAGAAAACAAGTATAAATTTCAAAAACTAAAAACTAACAAAATGATAACCAAAGCATGACAAAACTCTTAGATTTGTGTCTATTTGGGTCCGCTTTTAGAATTATGTAATATGTATCTAAACTTTCAATTTTTATGAATATTAATAAGTCATTAATCTTTACATAGAGTGTCTAATAGATATAAAATTGAATTTTATGTCTCGCTTAAATTTTATGTCTAGTAGATATGTGAATTTTAAAAAAAAATGTCAAATCGGTCAAAATCCTATTTAGATATAAAATTAAAATTTTAGGATCTATTGTACAATACAAAAATGAAAGTTTAAAAATTTACTATAGACAATTTTTAAAGTTGAAGAACTTAGTGGACATAAACTTAAAAATTTAAGAATCTATAAGACGTTTTTGAAAGTTTAATGACTTATTAAATACAAATTAATAATTTAAGGAGCTATTCTAACACTTTTTGAAAGTCTACTAACTGAAGAAATAAATTGAGAAGCTCAAGAATTAAACTTCTCATTTAACTTAAAATTAGATAAACTTTTTTGGCTTAAAATATCTTTAGTTTGGCTAAAAACATTACTCCTATTTTTTTTTAAGAGCCAAAAGTAGTTTTTTTTTCTAATTTTTTTTAATTTTTTTAATTTTTTTTAATTTTTTTTTAATTTTTATTTTACAAGAAAGGGTGAGAATTAAACAAAACATAGAAATTGAAGGAAAGAAAAAGCCTTTTTTAAAAATAAAATAGTAACCAAATAAAATTTAAATTTAATTACCTAATTGCTTAAACTATAAAACATATGTTATATTTATACGATGCATGCGTAGATTATTAATTTCAATTACTAATTTTAATCTTGATTTCAATAGGTGAGGACTGTTACAGAAGAACAAGTGAAATTACTTCGAGTAGCTGTCCATGATGTAAGTTAATTATAATAATTAATTGAGATGCCAAGATATTTAATTTTTTATATATATTATAATAAATGAAATTTTAGAAAACATATATAATAAATTATTTTTAATATAACAAGGTAGAGAAATTTGATCCAGAGACAAATTTAATTAAGGTTGGAGGCTCAAGCTCCCTCAATTTTTTGAGTTGTTTTCAAATATAGCAAAATGAGCCAACTTATTTACAAATATAGCAAAATGTCATTGTCTATTAGTGATAGACAATAACATTTTACTATATTTAAAAATATTTTTCAGCACTTTTGTCATTTAAAATAATTATTCATTTTTAAAAATTTATATATACTTTTTTTAAAAAAAAAAAATTTAAAACACAAAAAAAACCCAGGAACTTCAATGGTTTGACTGACTTCAACCCCCTCGACATCTCAAGTTCGAATCCCATATGTGTACAATCTTATGAAATCTTCTCCAATTTCATTGAAAATAGTACATCTCAATTACTAATATATTAATGTGATGATTAATAGTGAAAGCACTATCATATAATTAAAACATATAATTGATGATTGTTTAAGGTTCTGTTTAGTAATTATTTGACTTTTCGTTTTTTTGTTTTTAAAAATTAACAAAAACTACTTTCTTACCTACGATGATTTCTTACCATGATTTGTATCTTTCTTGAGTACAAGAGTTTAATTTCTAGCGAAATTTTAAAAACAAAAACAAATTTTTAAAAGGGGACTTTTTAAAAATAGAAAAAAAAAAAAAAAACTATTTACACAAAATAACAAAATTTTTAGATAGTTGGATAGATGATGATAGAAGTCTATCAAGGTCTATCGGTGATAGAAATGATAGAACTCTATCACTAATAGATGCTGATAGAAGTCTATCAATGTCTATCAGTGATTTTTTACTATTTTTTATAAATAGTTTGACATTTTTTCTATTTGTGAAAATTTTCCTTTTTAAAAACTATTTTTTTAGTTTTCAAAATTTAATTTCGTTTTCAAAAAATTGGTAGAAAGCAGATAACAAATCAAAAAATTTAGAGGTGGAAGAGGCATGTTTATAGGTTTAATTTTTAAAAACTAAAAATCGAAAAATTAAATTGTTATCAATCAAAACGTGTGACCTAAAATATTTAAATAAAATTGAAATTGAAATTAAAGACTGAAATTTTATTTTGAGACGTTTGTTAATCAAAGGTTTGATATGTGAAAGCAGGACTCGGATTCTAATGCAAGACCGTTGCAACTAATCTATAATCGAACAATGCAACTCCAAAGATCGAAAGAAAGTGAAGAATGAATTTATATATTTATTTACATTATGATGCAGGCCGTTTTTCTCACAGTGATGTATCCATTTTCCAATAATACTATCCCAGTTTTCATATTTTGTATTTCTTATTGATTATTAGGGATAAAAATACCATATATTTATTATATATTTCTAAAATTCAGG ATTCTCTAGAGATTGGAACATGGGGAAGCTCTTGTGCTCTTTCTTCTTTTCCATTCTTTTGCTTTCATTTAAGGCAATATCCCAAGAAGTTGATGATGAAAGAGGGTTTGATTATGAAAGAGATGGGGAAAAAGGACCAATTCATTGGGGAGAGCTTAGACCAGAGTGGCATACATGTAAGGCTGGGTTAATGCAATCTCCAATTGATTTATTGCATGAGAGAGTTGAAGTTATTTCACACTTGGGAGACCTTAAAATCAACTACAAATCCTCTAATGCCACACTCAAGAATAGAGGCCATGATATGATGATGAAATGGGTGGATGGAGGTGGATTCATGGAAATGAATGGAACTCAATATAAACTAAAACAATGTCATTGGCACTCACCTTCCGAGCACACCATTGATGGCAAGAAGTTTGATCTTGAAGCTCACTTAGTCCATGAAAGCTCAAACGGCATGATTTCTGTCATCGGAATCTTGTATCAGATTGGAGAACCTGATTACTTTTTATCAATGATTGAAGATCATTTAGAACTGGCCTCAGATACCCATGAAGAAGAGAGAGTGATTGGAATAATTGATCCAAATCTGTTGAAGATGGGTAGCAAACAATATTATAGATACATAGGCTCACTTACTGTTCCACCATGCACTGAAAATGTGATGTGGACTATGATTCACCAGGTGAGGACTGTTACAGAAGAACAAGTGAAATTACTTCGAGTAGCTGTCCATGATGACTCGGATTCTAATGCAAGACCGTTGCAACTAATCTATAATCGAACAATGCAACTCCAAAGATCGAAAGAAAGTGAAGAATGAATTTATATATTTATTTACATTATGATGCAGGCCGTTTTTCTCACAGTGATGTATCCATTTTCCAATAATACTATCCCAGTTTTCATATTTTGTATTTCTTATTGATTATTAGGGATAAAAATACCATATATTTATTATATATTTCTAAAATTCAGG ATGGGGAAGCTCTTGTGCTCTTTCTTCTTTTCCATTCTTTTGCTTTCATTTAAGGCAATATCCCAAGAAGTTGATGATGAAAGAGGGTTTGATTATGAAAGAGATGGGGAAAAAGGACCAATTCATTGGGGAGAGCTTAGACCAGAGTGGCATACATGTAAGGCTGGGTTAATGCAATCTCCAATTGATTTATTGCATGAGAGAGTTGAAGTTATTTCACACTTGGGAGACCTTAAAATCAACTACAAATCCTCTAATGCCACACTCAAGAATAGAGGCCATGATATGATGATGAAATGGGTGGATGGAGGTGGATTCATGGAAATGAATGGAACTCAATATAAACTAAAACAATGTCATTGGCACTCACCTTCCGAGCACACCATTGATGGCAAGAAGTTTGATCTTGAAGCTCACTTAGTCCATGAAAGCTCAAACGGCATGATTTCTGTCATCGGAATCTTGTATCAGATTGGAGAACCTGATTACTTTTTATCAATGATTGAAGATCATTTAGAACTGGCCTCAGATACCCATGAAGAAGAGAGAGTGATTGGAATAATTGATCCAAATCTGTTGAAGATGGGTAGCAAACAATATTATAGATACATAGGCTCACTTACTGTTCCACCATGCACTGAAAATGTGATGTGGACTATGATTCACCAGGTGAGGACTGTTACAGAAGAACAAGTGAAATTACTTCGAGTAGCTGTCCATGATGACTCGGATTCTAATGCAAGACCGTTGCAACTAATCTATAATCGAACAATGCAACTCCAAAGATCGAAAGAAAGTGAAGAATGA MGKLLCSFFFSILLLSFKAISQEVDDERGFDYERDGEKGPIHWGELRPEWHTCKAGLMQSPIDLLHERVEVISHLGDLKINYKSSNATLKNRGHDMMMKWVDGGGFMEMNGTQYKLKQCHWHSPSEHTIDGKKFDLEAHLVHESSNGMISVIGILYQIGEPDYFLSMIEDHLELASDTHEEERVIGIIDPNLLKMGSKQYYRYIGSLTVPPCTENVMWTMIHQVRTVTEEQVKLLRVAVHDDSDSNARPLQLIYNRTMQLQRSKESEE
BLAST of Lsi03G000300 vs. Swiss-Prot
Match: ATCA7_ARATH (Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana GN=ACA7 PE=2 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 7.8e-82 Identity = 144/264 (54.55%), Postives = 197/264 (74.62%), Query Frame = 1
BLAST of Lsi03G000300 vs. Swiss-Prot
Match: NEC3_NICLS (Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NEC3 PE=1 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 1.6e-74 Identity = 141/254 (55.51%), Postives = 187/254 (73.62%), Query Frame = 1
BLAST of Lsi03G000300 vs. Swiss-Prot
Match: ATCA5_ARATH (Alpha carbonic anhydrase 5 OS=Arabidopsis thaliana GN=ACA5 PE=3 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 3.9e-73 Identity = 133/262 (50.76%), Postives = 183/262 (69.85%), Query Frame = 1
BLAST of Lsi03G000300 vs. Swiss-Prot
Match: ATCA8_ARATH (Alpha carbonic anhydrase 8 OS=Arabidopsis thaliana GN=ACA8 PE=3 SV=3) HSP 1 Score: 265.0 bits (676), Expect = 8.9e-70 Identity = 131/244 (53.69%), Postives = 165/244 (67.62%), Query Frame = 1
BLAST of Lsi03G000300 vs. Swiss-Prot
Match: ATCA2_ARATH (Alpha carbonic anhydrase 2 OS=Arabidopsis thaliana GN=ACA2 PE=2 SV=2) HSP 1 Score: 258.5 bits (659), Expect = 8.3e-68 Identity = 117/224 (52.23%), Postives = 166/224 (74.11%), Query Frame = 1
BLAST of Lsi03G000300 vs. TrEMBL
Match: B9STU9_RICCO (Carbonic anhydrase, putative OS=Ricinus communis GN=RCOM_0544250 PE=4 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 8.6e-96 Identity = 163/265 (61.51%), Postives = 212/265 (80.00%), Query Frame = 1
BLAST of Lsi03G000300 vs. TrEMBL
Match: A0A067LIF8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05491 PE=4 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 4.3e-95 Identity = 168/267 (62.92%), Postives = 214/267 (80.15%), Query Frame = 1
BLAST of Lsi03G000300 vs. TrEMBL
Match: A0A0A0LV23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G120450 PE=4 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 7.3e-95 Identity = 163/258 (63.18%), Postives = 209/258 (81.01%), Query Frame = 1
BLAST of Lsi03G000300 vs. TrEMBL
Match: A0A067GDC1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039445mg PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 9.5e-95 Identity = 166/265 (62.64%), Postives = 209/265 (78.87%), Query Frame = 1
BLAST of Lsi03G000300 vs. TrEMBL
Match: A0A151S5F1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_028191 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 9.5e-95 Identity = 157/261 (60.15%), Postives = 211/261 (80.84%), Query Frame = 1
BLAST of Lsi03G000300 vs. TAIR10
Match: AT1G08080.1 (AT1G08080.1 alpha carbonic anhydrase 7) HSP 1 Score: 305.1 bits (780), Expect = 4.4e-83 Identity = 144/264 (54.55%), Postives = 197/264 (74.62%), Query Frame = 1
BLAST of Lsi03G000300 vs. TAIR10
Match: AT1G08065.1 (AT1G08065.1 alpha carbonic anhydrase 5) HSP 1 Score: 276.2 bits (705), Expect = 2.2e-74 Identity = 133/262 (50.76%), Postives = 183/262 (69.85%), Query Frame = 1
BLAST of Lsi03G000300 vs. TAIR10
Match: AT2G28210.1 (AT2G28210.1 alpha carbonic anhydrase 2) HSP 1 Score: 253.4 bits (646), Expect = 1.5e-67 Identity = 111/208 (53.37%), Postives = 158/208 (75.96%), Query Frame = 1
BLAST of Lsi03G000300 vs. TAIR10
Match: AT4G20990.1 (AT4G20990.1 alpha carbonic anhydrase 4) HSP 1 Score: 235.7 bits (600), Expect = 3.3e-62 Identity = 115/249 (46.18%), Postives = 166/249 (66.67%), Query Frame = 1
BLAST of Lsi03G000300 vs. TAIR10
Match: AT4G21000.1 (AT4G21000.1 alpha carbonic anhydrase 6) HSP 1 Score: 209.9 bits (533), Expect = 1.9e-54 Identity = 96/204 (47.06%), Postives = 141/204 (69.12%), Query Frame = 1
BLAST of Lsi03G000300 vs. NCBI nr
Match: gi|449443578|ref|XP_004139554.1| (PREDICTED: alpha carbonic anhydrase 7-like [Cucumis sativus]) HSP 1 Score: 500.0 bits (1286), Expect = 2.6e-138 Identity = 241/269 (89.59%), Postives = 254/269 (94.42%), Query Frame = 1
BLAST of Lsi03G000300 vs. NCBI nr
Match: gi|659072266|ref|XP_008464591.1| (PREDICTED: LOW QUALITY PROTEIN: bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3-like [Cucumis melo]) HSP 1 Score: 498.0 bits (1281), Expect = 1.0e-137 Identity = 239/268 (89.18%), Postives = 255/268 (95.15%), Query Frame = 1
BLAST of Lsi03G000300 vs. NCBI nr
Match: gi|255577068|ref|XP_002529418.1| (PREDICTED: alpha carbonic anhydrase 7 [Ricinus communis]) HSP 1 Score: 358.2 bits (918), Expect = 1.2e-95 Identity = 163/265 (61.51%), Postives = 212/265 (80.00%), Query Frame = 1
BLAST of Lsi03G000300 vs. NCBI nr
Match: gi|802554827|ref|XP_012065108.1| (PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]) HSP 1 Score: 355.9 bits (912), Expect = 6.1e-95 Identity = 168/267 (62.92%), Postives = 214/267 (80.15%), Query Frame = 1
BLAST of Lsi03G000300 vs. NCBI nr
Match: gi|1009115852|ref|XP_015874453.1| (PREDICTED: alpha carbonic anhydrase 7 [Ziziphus jujuba]) HSP 1 Score: 355.5 bits (911), Expect = 8.0e-95 Identity = 166/262 (63.36%), Postives = 207/262 (79.01%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |