Lsi03G000270 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATGGAGAAGAAGCTCTATTTTCAAGTGTTGTTTTGCTCATTTTTCTGTGCCTTTCTTTTGGTTTCATGGCCTGCAATGTCCCAAGAAGTTGGTAGGAAGCTATTCACTCATGCCTCTGATTATGTCTCATATGATTAGTTTTCTTTCTATTTCTATTTTTTTATTAATTTTTTTTTTCGAAAAATTACATTAAACTTTTATGAGATTTAGACTTTAGTCCTTCAAGTTTGAAAAATGATTTGAAAATGGTTATTTTAAAACTTTAGAACCATACAAACACTAAGTCCGAATTTCAGAGACCAAAAGTATATATATATATATATATATATATATAAGCTCTAAATTTTCCTAAATTATAGCCTTAAAATTATATTAATTAAAACATTAAACTCTTACGAGTGAAACAATTTTGATCCTTTGTTAGGATTTTATTTTAATACGATTAATGTGCATATATATTTCGCACATGTATTAAGTTACTTGAAATGCAAAAATTCACATAATATATTAGCTAGAGACAATTGTTGAAATCAAATTGATAGTATCAACATTTTTTTAATTATTATTACGAGTAATTTTTTTTACTTCTCGTTCCACTCTATTTTTCTTTACATATTTAAGAATTTTTTTTTGTGAAAATTCCAAGTACTTTTGGGATAGAAATAATTTTATTTAAATAATCTTAAAGTGATCGAAAATGAAATCAAGTGAAGATAGTTATAATTTAGACATTTAAATTGACTCAAATATGAAAATCTAATGTTTAAATTAACACAATTATTCTTATTTTTAGAGAAGAATCATATTATTAAATGGATAATTAATGATTAGGAGTGAAAGTCAAATGAAAAAGTCGATCAAATTGATGGAAAAAAAAAAAAAGAAAATCAAAGTCAAATGGACTTTACTTACAATCCCATTTGGTTTTGTTTGGTATGCATGCAGATGATCAGAAAGAGTTCGATTATAATCAAAAGGGAAAGAAAGGACCCCTATATTGGGGAAATCTTAAACTAGAATGGCATAACTGCAAGACTGGACGAATGCAATCTCCTATTGATCTATTGCATAGGAAAGTTCGTATTGTTTCTCATTTTACAGACCTCAAAATCGATTATAAACCATCAAATGCAACTCTTAGAAACAGAGGTCATGATATAATGGTAACCAATATAACATTATTATTTTTTTTTTTCTTTCAAGTTAGACCATGTTTGGTGCAAATTTGATTATTCTTCGTCTTTTAAAATATATAAATTATGTTTATATTCAATTTGATGATAATATTTAGAAAAATTATTAAAAATAGGAAAATTTTTAGATAATTGTGATAGACGCTGATAGATATAGACTTTGCTATATTTGTAATTTTTTAAAAAATGTTGCTATACACTTAGTTATTATCCCTAAAATTGCTATTCATTATAATTACCTTATATTTGATTGAAAATTCTATTATATATTTAGAATTACATATATATTTCTTTGAGTTAAATTATATATATTTAACCAAATTTGAATTTTGTATGTAATTATTATGATGGGTGCAGTTGAAATGGGGTGATAGGGCTGGATTTATGGAAGTAAATGGAACTCAATATTTTCTGAAACAATGCCATTGGCACTCACCCTCTGAGCACACTATCAATGGTAGAAGGTTTGCTTTAGAAGCTCATTTGGTGCACCAAAGCCAAACAGGAAATGTTGCTGTCATTGGAATTCTCTATAATATAGGACGACCTGACTATTTTTTATCCAGAGTAAAGTTTCAAAATCTTAATTACCATTTAAATTAAGATTAAAATTTTTCTTTCACGTATTTCTAGTAATAAAACAAACTTATGGTAAATTTAGTCCATATGATTTGAAAAAAGTTATTAGAGTTTAGTATTCACTATGATTTAAAACTAGAATTTAGTCCCTATGGTTTGATAAAACCTTCCGTCCCTAAAATAGGAACTAAATTCTAACTTTTTCTAAACCATAGGGACTAAATTATATTTTTCTCAAAAATATAAGAATCAAATCCTAACTTTTCTCAAATCATAGGGAATAAATTCATAATTTAACCAATGAGATTTCAATAATTTACCCACAAAATACTTATGAAGTTTATCTTGATTTCTTATCTAATTAAGTGTTCTCCATGTAAAAGAAACTTTTGAGAGTACATTAGTTTTAGTTTTGTTTTCTAAGAAAATTATTTATTGAAATACTATATTGAGTAAAAATGTTCTCTTTTCATAAAAAATCAAAACAAACAATTTGTTATTCAACATGTTTAATTCTTTAAAATTAGCTATATTAAAAATATGTTAAAATACCATTTTGGTTCCATATACTTTCAAGTTTGTTCAATTTTAGTCCCTGTATTTTCAATAAATCTTAAATCTAGTCCTTACTACTAGTTTATTATTGTGATTATTTTACTACTTTTTATTTTTTATTAACATTTTCATTATAAATTTTGAAAATATATTCACATATTGTGTTTCTTTGCATGAAAATTATTATTATTAATTTAATCAATTTTGATAAAAAAATAATTTGGAGGGACTAAATTTAAAATTTATTGAAAGTACATAGACTAAAATTAGACATTTGAAAGTATAGGAACTAAAATTGAACTAATTACAAAATATAGAGATTAAAATGATTTTTTACCCTTAAAAATATAATGTAGTACACAAAGTTCTAAATTTGGTATTGTTTTCTTCCCATTTTAGGTGAAAGAACATTTGGAAGAAATATCAGATACAAAGAAAGACAAAGTATTGAATGTGGTTGATCCATCATTGTTAAAGATGCGAAGCAGTTTATATTATAGGTATATTGGCTCTCTAACGGTTCCTCCATGTTCTCAAAATGTACTTTGGACTATGGTCAGAAAGGTATTTTTCATTAACCTCTTGTTTAATCAACTTAATTATATATATAAGCTTACTTGATTATTCTCAAATTTGTATTTTCTTTGTGCTTAAATCATTATTCTTGTATACTTTTTTAGGTTAGGACTGTTGCACCTGAACAAGTAAAATTGCTTCGTATGGCCGTTCATGATGTAAGTGAGATCGACTCTAAGGTTCCATTTTGATAAAACTTTCGTCTTTCGTTTTTCTTTTAGTTAAATTATAAGTTTTGTTTCTAAACTTGTAATATTGGGTTGAATATGTCCATTTTTAGATATATAAATTTGAATTGAAAAGCTAGGGTTTTACTTTAATTATAAGATGCAAATTTTTTTTTTTGGTTTGATATGTAAATTAATTTTAAAAAAATATATGATAGGACAAATACTATTAGATACAATTTTGAATGTTTTTAATAATAGACATTTTTGGACTACAAGAATGTATTAAATATAGAATTAAAAAAATCAAATTGTTATCAAACAATACCTTAAAAAATGAAGTCACTAGCTAAAATTCTCAATTTGTTCAACTAAGGTCCCGTTTGGTAATCATTTTGTTTTTTGTTTTTAGTTTATGAAAATTAAGCCTATAAATACTCATTCTACCTTTAAATTTCTTGTCTTTTTTATTTACCTTCTACTAATATTTTTAAAAACCAAGTCAAAATTTAAAAACTAAAAGAAAAGTAGTTTTTGAAAACTTATTTTTATTTTTGGAATTTGGTTAAGAATACAACTCTTGTATTTAAGTAAGATGCAAATCGTTGTGCAAAATTGAGAGGAAGTAGGCTTAAATTTCAAAAACCAAAAACCAAAAACTAAAAATAAAATGATTAACAAATGAGATGTAAATTTTATAATTTGCTTTCCCAAAAAGAATAAGAACATGCCCGTTTTAAGTCTAATTCGATAAAATTAAAGATGCAGTGTTGAAATTGGTTACAGCTCATCAATGTAAATGTAGAAATTAAGAAAGATGTAATGTTTTAGAAAAGCATGTGATCACAATCAATTCGAGTACAACTCTATTAGTTTAGGCATATGTCATCGACTAATAAATCAAATATTTTAATCCATTTGTTTTTGAAAGAATAAATAAAATAAAAATAAACCAGCTGAAATTTCCCTGTTATCCCTTGATATATTTGCAAATTCATATACTTTTCTTCTTTAACACTTTGTGGCTTTTTCTTTTTCTTTTTTTTTCCGTTTTTTCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTCCTTTTTTTTTTTTTTTTTACAAGACATTCAAACTCTTACTTCCTTGTTTGTGACATAATATTGTAATAAAAAAAATTATTATTTTTAAGATGTATAATAATGTAGTTTATTGGTTTGTCTGTGCAGGACTCAGATACTAATACAAGACCTTTGCAACCTCTAAATAATCGAAATATTCAACTTCGAATCAAATCAAACATCAATGGAGGAGGAGAATGATTCAT GATGGAGAAGAAGCTCTATTTTCAAGTGTTGTTTTGCTCATTTTTCTGTGCCTTTCTTTTGGTTTCATGGCCTGCAATGTCCCAAGAAGTTGATGATCAGAAAGAGTTCGATTATAATCAAAAGGGAAAGAAAGGACCCCTATATTGGGGAAATCTTAAACTAGAATGGCATAACTGCAAGACTGGACGAATGCAATCTCCTATTGATCTATTGCATAGGAAAGTTCGTATTGTTTCTCATTTTACAGACCTCAAAATCGATTATAAACCATCAAATGCAACTCTTAGAAACAGAGGTCATGATATAATGTTGAAATGGGGTGATAGGGCTGGATTTATGGAAGTAAATGGAACTCAATATTTTCTGAAACAATGCCATTGGCACTCACCCTCTGAGCACACTATCAATGGTAGAAGGTTTGCTTTAGAAGCTCATTTGGTGCACCAAAGCCAAACAGGAAATGTTGCTGTCATTGGAATTCTCTATAATATAGGACGACCTGACTATTTTTTATCCAGAAAACTTTTGAGAGTACATTATTTATTGGACTCAGATACTAATACAAGACCTTTGCAACCTCTAAATAATCGAAATATTCAACTTCGAATCAAATCAAACATCAATGGAGGAGGAGAATGATTCAT ATGGAGAAGAAGCTCTATTTTCAAGTGTTGTTTTGCTCATTTTTCTGTGCCTTTCTTTTGGTTTCATGGCCTGCAATGTCCCAAGAAGTTGATGATCAGAAAGAGTTCGATTATAATCAAAAGGGAAAGAAAGGACCCCTATATTGGGGAAATCTTAAACTAGAATGGCATAACTGCAAGACTGGACGAATGCAATCTCCTATTGATCTATTGCATAGGAAAGTTCGTATTGTTTCTCATTTTACAGACCTCAAAATCGATTATAAACCATCAAATGCAACTCTTAGAAACAGAGGTCATGATATAATGTTGAAATGGGGTGATAGGGCTGGATTTATGGAAGTAAATGGAACTCAATATTTTCTGAAACAATGCCATTGGCACTCACCCTCTGAGCACACTATCAATGGTAGAAGGTTTGCTTTAGAAGCTCATTTGGTGCACCAAAGCCAAACAGGAAATGTTGCTGTCATTGGAATTCTCTATAATATAGGACGACCTGACTATTTTTTATCCAGAAAACTTTTGAGAGTACATTATTTATTGGACTCAGATACTAATACAAGACCTTTGCAACCTCTAAATAATCGAAATATTCAACTTCGAATCAAATCAAACATCAATGGAGGAGGAGAATGA MEKKLYFQVLFCSFFCAFLLVSWPAMSQEVDDQKEFDYNQKGKKGPLYWGNLKLEWHNCKTGRMQSPIDLLHRKVRIVSHFTDLKIDYKPSNATLRNRGHDIMLKWGDRAGFMEVNGTQYFLKQCHWHSPSEHTINGRRFALEAHLVHQSQTGNVAVIGILYNIGRPDYFLSRKLLRVHYLLDSDTNTRPLQPLNNRNIQLRIKSNINGGGE
BLAST of Lsi03G000270 vs. Swiss-Prot
Match: ATCA7_ARATH (Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana GN=ACA7 PE=2 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 5.2e-49 Identity = 94/191 (49.21%), Postives = 129/191 (67.54%), Query Frame = 1
BLAST of Lsi03G000270 vs. Swiss-Prot
Match: ATCA2_ARATH (Alpha carbonic anhydrase 2 OS=Arabidopsis thaliana GN=ACA2 PE=2 SV=2) HSP 1 Score: 186.8 bits (473), Expect = 2.4e-46 Identity = 89/199 (44.72%), Postives = 131/199 (65.83%), Query Frame = 1
BLAST of Lsi03G000270 vs. Swiss-Prot
Match: NEC3_NICLS (Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NEC3 PE=1 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.2e-45 Identity = 92/166 (55.42%), Postives = 118/166 (71.08%), Query Frame = 1
BLAST of Lsi03G000270 vs. Swiss-Prot
Match: ATCA5_ARATH (Alpha carbonic anhydrase 5 OS=Arabidopsis thaliana GN=ACA5 PE=3 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 3.9e-44 Identity = 85/164 (51.83%), Postives = 113/164 (68.90%), Query Frame = 1
BLAST of Lsi03G000270 vs. Swiss-Prot
Match: ATCA8_ARATH (Alpha carbonic anhydrase 8 OS=Arabidopsis thaliana GN=ACA8 PE=3 SV=3) HSP 1 Score: 172.9 bits (437), Expect = 3.6e-42 Identity = 81/150 (54.00%), Postives = 102/150 (68.00%), Query Frame = 1
BLAST of Lsi03G000270 vs. TrEMBL
Match: A0A0A0LV23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G120450 PE=4 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 2.9e-78 Identity = 144/207 (69.57%), Postives = 171/207 (82.61%), Query Frame = 1
BLAST of Lsi03G000270 vs. TrEMBL
Match: A0A0A0LXW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G120420 PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 1.9e-77 Identity = 141/207 (68.12%), Postives = 172/207 (83.09%), Query Frame = 1
BLAST of Lsi03G000270 vs. TrEMBL
Match: A0A0A0LXW9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G120470 PE=4 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 3.0e-67 Identity = 124/185 (67.03%), Postives = 147/185 (79.46%), Query Frame = 1
BLAST of Lsi03G000270 vs. TrEMBL
Match: A0A0A0LSD3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G120410 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 8.4e-62 Identity = 110/155 (70.97%), Postives = 135/155 (87.10%), Query Frame = 1
BLAST of Lsi03G000270 vs. TrEMBL
Match: V4RT46_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029790mg PE=4 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 2.7e-60 Identity = 112/199 (56.28%), Postives = 145/199 (72.86%), Query Frame = 1
BLAST of Lsi03G000270 vs. TAIR10
Match: AT1G08080.1 (AT1G08080.1 alpha carbonic anhydrase 7) HSP 1 Score: 195.7 bits (496), Expect = 3.0e-50 Identity = 94/191 (49.21%), Postives = 129/191 (67.54%), Query Frame = 1
BLAST of Lsi03G000270 vs. TAIR10
Match: AT2G28210.1 (AT2G28210.1 alpha carbonic anhydrase 2) HSP 1 Score: 187.6 bits (475), Expect = 8.0e-48 Identity = 86/177 (48.59%), Postives = 123/177 (69.49%), Query Frame = 1
BLAST of Lsi03G000270 vs. TAIR10
Match: AT5G56330.1 (AT5G56330.1 alpha carbonic anhydrase 8) HSP 1 Score: 182.2 bits (461), Expect = 3.4e-46 Identity = 96/206 (46.60%), Postives = 120/206 (58.25%), Query Frame = 1
BLAST of Lsi03G000270 vs. TAIR10
Match: AT1G08065.1 (AT1G08065.1 alpha carbonic anhydrase 5) HSP 1 Score: 179.5 bits (454), Expect = 2.2e-45 Identity = 85/164 (51.83%), Postives = 113/164 (68.90%), Query Frame = 1
BLAST of Lsi03G000270 vs. TAIR10
Match: AT4G20990.1 (AT4G20990.1 alpha carbonic anhydrase 4) HSP 1 Score: 169.9 bits (429), Expect = 1.7e-42 Identity = 84/185 (45.41%), Postives = 113/185 (61.08%), Query Frame = 1
BLAST of Lsi03G000270 vs. NCBI nr
Match: gi|778659160|ref|XP_011653931.1| (PREDICTED: alpha carbonic anhydrase 7-like [Cucumis sativus]) HSP 1 Score: 299.7 bits (766), Expect = 4.1e-78 Identity = 144/207 (69.57%), Postives = 171/207 (82.61%), Query Frame = 1
BLAST of Lsi03G000270 vs. NCBI nr
Match: gi|659071960|ref|XP_008462808.1| (PREDICTED: bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3-like [Cucumis melo]) HSP 1 Score: 299.3 bits (765), Expect = 5.4e-78 Identity = 140/207 (67.63%), Postives = 174/207 (84.06%), Query Frame = 1
BLAST of Lsi03G000270 vs. NCBI nr
Match: gi|778659157|ref|XP_004139553.2| (PREDICTED: alpha carbonic anhydrase 7-like [Cucumis sativus]) HSP 1 Score: 297.0 bits (759), Expect = 2.7e-77 Identity = 141/207 (68.12%), Postives = 172/207 (83.09%), Query Frame = 1
BLAST of Lsi03G000270 vs. NCBI nr
Match: gi|659071962|ref|XP_008462817.1| (PREDICTED: bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3-like [Cucumis melo]) HSP 1 Score: 293.1 bits (749), Expect = 3.9e-76 Identity = 139/207 (67.15%), Postives = 172/207 (83.09%), Query Frame = 1
BLAST of Lsi03G000270 vs. NCBI nr
Match: gi|659071964|ref|XP_008462825.1| (PREDICTED: bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3-like isoform X1 [Cucumis melo]) HSP 1 Score: 273.5 bits (698), Expect = 3.2e-70 Identity = 125/171 (73.10%), Postives = 147/171 (85.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |