Lsi03G000080 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACCGCTTCCTCTGAAATTCCTCTCTCTCGCTCTATTCTCTCGCTATAAATACTCTCCCACTCTAAACGGTTTACCATCTCTAATTTCTATTTTATATTTTGAAATTCAGAAGAAAAAAAACTACCTGGGTTTCAATGGGAGAGGTTATTCTCTTCTTCCCTGTGTTTCCTTGTGTTAATTCTTTACCATTTTGTTCTCTATATGTGTTCATCTTCTTTGTGGGTTTTCTCTCTTGTTTCAGGCCGTACAGAAGAAGAAGAAGAACGAGAATGAGAAGAATGAGAAGAATGGAGATGGAGGAGGAGGTGGGAAGAAGAAGGAAGAGATTCCATTCACTGTGGTTCTTAAGATCGACATGCATTGTGAAGGATGTGCCAACAAAATCACCAAATGCGTTAAAGGATTTGAAGGTATGATTACGATGGCCTTGGCGGATTTCTTTGTTCCTCTGTTTTTCTTCCCCCATTCTGTTATTGTTGTGAGTTTCACTTCGATTTTCCCCATCTGGTTGTTTTCCTTTTTGGGTTATTGTTTGTCTTGTTTTCCTATCAGTTTTAGATATAAACATACACTTCATATTCTTCCGTTTTCGATTTTTCCATTTCCGCCATTACAGAGCAGTGAATCGATAATGCTCTGTTTTCGAACTGTGAAAAGAGGGGAATGAAAACCCAAATCTGATTTGTTTAACTATTTTTGCTTTTCCCATTTTCGTTGTGGTAATTTTCCGTTATCGGCAATGTAAGAATCTGACACCATTAATGTGGCTCTGTTTTTGTTTGTTCTTCAGGTGTGCAGTCTGTGAAAGCTGAGATTGATGGCAACAAATTGACAGTAATGGGGAAGAAAATAGACGCAACGAAACTCCGTGAGAAACTTTCAAACAAGACGAAGAAGAAAGTGGATTTGATTTCGCCACAACCCAAGAAAGAAAAGGACTCGAAGCCCAAAGATAAGGTCGACGATGACCAGACCTCTTCCAGTAACAACAAATCCGACAAGAAAACAGATGAGAATAAGAAGAAACCCAAAGAGGTAATTAGAAAAATAAACAAATCCCCAATTGAAAGAAAAATTGGTCCCCTCTGTGATTCCGTTTGATTTTGTTTGTTCTTCTCTGTTTTTCAGCCGCCGGTGACGACGGCAGTGCTGAAGGTTTCATTACACTGTCAAGGCTGTATAGAGAAAATTCAAAGAGTAACAAACAAGTTCAAAGGTAAGTAATATTATTAATCAACAATTATTATCACTAAACAAGAAAATGATTTCTAATTTGATTTGATTTGATTTCAAACAGGTGTTCAAGATATGTCAGTGGACAAACAGAAGGATTTAGTGACAGTGAAAGGCACAATGGATGTTAAGGCCTTAAGTGGTTGCTTAAGTGAGAGACTAAAACGACCAGTTGAAATTGTTCCAATGAAGAAGGAGAAAGACAAGGACAATATCAAAAACGAAGGCGGCGGTGGTGACAAGAAAGACACCGCTGCCGTTGCCACCGGGGATGGGGATGGCGATGGCAATGGCAATGGCAATGGCGGAGGGAAGAAGAAGAAGAAAGGCAGTAACGGCAGCGGCGGTGATGGAAATGGTGGGGAAGATGGAGGTGGAGGGAAAATGGAAGGGAACAAAATGGAGTACATGGGAATAGGAGGAATAGGGTATGGACATGGATACGGATATGGGTACGAGTACGGGTTGAATAGCGGGTATGGGTACGGACCGGGTGGGCTTGTGGGGGAGAATTTACACGCGCCACAATTGTTTAGTGATGAGAATCCAAATGCTTGTTTCGTAATGTAAGAAGGAAATTGGGAAGAGAAGAAAAAAGAGTGTAAAAAGTGAGAATAGGTTTTAGAAAAAGAAAAGAAATGGTTTTTGTTTGGTTAGTGAGAAAGTAAGAGAGAAAAGGAAAGAAAATCCAATGGCTAATTGGTAATTTGGTTAATTTTGTAGGGAATCAATGAAGGGTTTGTTGTTATTTTGTTAGTTAATATTGGTGAGAGGAATTGATTCTTCTCATTATATTCTTCACCTATTTCTATTTGTCTTTCACTATGCCATTTTATGTGTTTGTCAATATTTTAC AACCGCTTCCTCTGAAATTCCTCTCTCTCGCTCTATTCTCTCGCTATAAATACTCTCCCACTCTAAACGGTTTACCATCTCTAATTTCTATTTTATATTTTGAAATTCAGAAGAAAAAAAACTACCTGGGTTTCAATGGGAGAGGCCGTACAGAAGAAGAAGAAGAACGAGAATGAGAAGAATGAGAAGAATGGAGATGGAGGAGGAGGTGGGAAGAAGAAGGAAGAGATTCCATTCACTGTGGTTCTTAAGATCGACATGCATTGTGAAGGATGTGCCAACAAAATCACCAAATGCGTTAAAGGATTTGAAGGTATGATTACGATGGCCTTGGCGGATTTCTTTGTTCCTCTGTTTTTCTTCCCCCATTCTGTTATTGTTGTGAGTTTCACTTCGATTTTCCCCATCTGGTTGTTTTCCTTTTTGGGTTATTGTTTGTCTTGTTTTCCTATCAGTTTTAGATATAAACATACACTTCATATTCTTCCGTTTTCGATTTTTCCATTTCCGCCATTACAGAGCAGTGAATCGATAATGCTCTGTTTTCGAACTTCTGTGAAAGCTGAGATTGATGGCAACAAATTGACAGTAATGGGGAAGAAAATAGACGCAACGAAACTCCGTGAGAAACTTTCAAACAAGACGAAGAAGAAAGTGGATTTGATTTCGCCACAACCCAAGAAAGAAAAGGACTCGAAGCCCAAAGATAAGGTCGACGATGACCAGACCTCTTCCAGTAACAACAAATCCGACAAGAAAACAGATGAGAATAAGAAGAAACCCAAAGAGGTAATTAGAAAAATAAACAAATCCCCAATTGAAAGAAAAATTGGTCCCCTCTGTGATTCCCCGCCGGTGACGACGGCAGTGCTGAAGGTTTCATTACACTGTCAAGGCTGTATAGAGAAAATTCAAAGAGTAACAAACAAGTTCAAAGGTGTTCAAGATATGTCAGTGGACAAACAGAAGGATTTAGTGACAGTGAAAGGCACAATGGATGTTAAGGCCTTAAGTGGTTGCTTAAGTGAGAGACTAAAACGACCAGTTGAAATTGTTCCAATGAAGAAGGAGAAAGACAAGGACAATATCAAAAACGAAGGCGGCGGTGGTGACAAGAAAGACACCGCTGCCGTTGCCACCGGGGATGGGGATGGCGATGGCAATGGCAATGGCAATGGCGGAGGGAAGAAGAAGAAGAAAGGCAGTAACGGCAGCGGCGGTGATGGAAATGGTGGGGAAGATGGAGGTGGAGGGAAAATGGAAGGGAACAAAATGGAGTACATGGGAATAGGAGGAATAGGGTATGGACATGGATACGGATATGGGTACGAGTACGGGTTGAATAGCGGGTATGGGTACGGACCGGGTGGGCTTGTGGGGGAGAATTTACACGCGCCACAATTGTTTAGTGATGAGAATCCAAATGCTTGTTTCGTAATGTAAGAAGGAAATTGGGAAGAGAAGAAAAAAGAGTGTAAAAAGTGAGAATAGGTTTTAGAAAAAGAAAAGAAATGGTTTTTGTTTGGTTAGTGAGAAAGTAAGAGAGAAAAGGAAAGAAAATCCAATGGCTAATTGGTAATTTGGTTAATTTTGTAGGGAATCAATGAAGGGTTTGTTGTTATTTTGTTAGTTAATATTGGTGAGAGGAATTGATTCTTCTCATTATATTCTTCACCTATTTCTATTTGTCTTTCACTATGCCATTTTATGTGTTTGTCAATATTTTAC ATGGGAGAGGCCGTACAGAAGAAGAAGAAGAACGAGAATGAGAAGAATGAGAAGAATGGAGATGGAGGAGGAGGTGGGAAGAAGAAGGAAGAGATTCCATTCACTGTGGTTCTTAAGATCGACATGCATTGTGAAGGATGTGCCAACAAAATCACCAAATGCGTTAAAGGATTTGAAGGTATGATTACGATGGCCTTGGCGGATTTCTTTGTTCCTCTGTTTTTCTTCCCCCATTCTGTTATTGTTGTGAGTTTCACTTCGATTTTCCCCATCTGGTTGTTTTCCTTTTTGGGTTATTGTTTGTCTTGTTTTCCTATCAGTTTTAGATATAAACATACACTTCATATTCTTCCGTTTTCGATTTTTCCATTTCCGCCATTACAGAGCAGTGAATCGATAATGCTCTGTTTTCGAACTTCTGTGAAAGCTGAGATTGATGGCAACAAATTGACAGTAATGGGGAAGAAAATAGACGCAACGAAACTCCGTGAGAAACTTTCAAACAAGACGAAGAAGAAAGTGGATTTGATTTCGCCACAACCCAAGAAAGAAAAGGACTCGAAGCCCAAAGATAAGGTCGACGATGACCAGACCTCTTCCAGTAACAACAAATCCGACAAGAAAACAGATGAGAATAAGAAGAAACCCAAAGAGGTAATTAGAAAAATAAACAAATCCCCAATTGAAAGAAAAATTGGTCCCCTCTGTGATTCCCCGCCGGTGACGACGGCAGTGCTGAAGGTTTCATTACACTGTCAAGGCTGTATAGAGAAAATTCAAAGAGTAACAAACAAGTTCAAAGGTGTTCAAGATATGTCAGTGGACAAACAGAAGGATTTAGTGACAGTGAAAGGCACAATGGATGTTAAGGCCTTAAGTGGTTGCTTAAGTGAGAGACTAAAACGACCAGTTGAAATTGTTCCAATGAAGAAGGAGAAAGACAAGGACAATATCAAAAACGAAGGCGGCGGTGGTGACAAGAAAGACACCGCTGCCGTTGCCACCGGGGATGGGGATGGCGATGGCAATGGCAATGGCAATGGCGGAGGGAAGAAGAAGAAGAAAGGCAGTAACGGCAGCGGCGGTGATGGAAATGGTGGGGAAGATGGAGGTGGAGGGAAAATGGAAGGGAACAAAATGGAGTACATGGGAATAGGAGGAATAGGGTATGGACATGGATACGGATATGGGTACGAGTACGGGTTGAATAGCGGGTATGGGTACGGACCGGGTGGGCTTGTGGGGGAGAATTTACACGCGCCACAATTGTTTAGTGATGAGAATCCAAATGCTTGTTTCGTAATGTAA MGEAVQKKKKNENEKNEKNGDGGGGGKKKEEIPFTVVLKIDMHCEGCANKITKCVKGFEGMITMALADFFVPLFFFPHSVIVVSFTSIFPIWLFSFLGYCLSCFPISFRYKHTLHILPFSIFPFPPLQSSESIMLCFRTSVKAEIDGNKLTVMGKKIDATKLREKLSNKTKKKVDLISPQPKKEKDSKPKDKVDDDQTSSSNNKSDKKTDENKKKPKEVIRKINKSPIERKIGPLCDSPPVTTAVLKVSLHCQGCIEKIQRVTNKFKGVQDMSVDKQKDLVTVKGTMDVKALSGCLSERLKRPVEIVPMKKEKDKDNIKNEGGGGDKKDTAAVATGDGDGDGNGNGNGGGKKKKKGSNGSGGDGNGGEDGGGGKMEGNKMEYMGIGGIGYGHGYGYGYEYGLNSGYGYGPGGLVGENLHAPQLFSDENPNACFVM
BLAST of Lsi03G000080 vs. Swiss-Prot
Match: HIP3_ARATH (Heavy metal-associated isoprenylated plant protein 3 OS=Arabidopsis thaliana GN=HIPP3 PE=1 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 3.4e-42 Identity = 144/308 (46.75%), Postives = 170/308 (55.19%), Query Frame = 1
BLAST of Lsi03G000080 vs. TrEMBL
Match: A0A0A0LSA4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G103270 PE=4 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 5.1e-106 Identity = 235/300 (78.33%), Postives = 248/300 (82.67%), Query Frame = 1
BLAST of Lsi03G000080 vs. TrEMBL
Match: V4SL19_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028824mg PE=4 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 2.5e-52 Identity = 158/302 (52.32%), Postives = 190/302 (62.91%), Query Frame = 1
BLAST of Lsi03G000080 vs. TrEMBL
Match: W9S929_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020605 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.3e-52 Identity = 162/307 (52.77%), Postives = 188/307 (61.24%), Query Frame = 1
BLAST of Lsi03G000080 vs. TrEMBL
Match: A0A067EYM6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020014mg PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 7.2e-52 Identity = 159/305 (52.13%), Postives = 189/305 (61.97%), Query Frame = 1
BLAST of Lsi03G000080 vs. TrEMBL
Match: M5W0A4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008910mg PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.7e-48 Identity = 148/311 (47.59%), Postives = 182/311 (58.52%), Query Frame = 1
BLAST of Lsi03G000080 vs. TAIR10
Match: AT5G60800.2 (AT5G60800.2 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 172.6 bits (436), Expect = 5.5e-43 Identity = 143/308 (46.43%), Postives = 170/308 (55.19%), Query Frame = 1
BLAST of Lsi03G000080 vs. TAIR10
Match: AT5G03380.1 (AT5G03380.1 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 111.3 bits (277), Expect = 1.5e-24 Identity = 122/342 (35.67%), Postives = 171/342 (50.00%), Query Frame = 1
BLAST of Lsi03G000080 vs. TAIR10
Match: AT2G36950.1 (AT2G36950.1 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 106.3 bits (264), Expect = 4.8e-23 Identity = 121/339 (35.69%), Postives = 165/339 (48.67%), Query Frame = 1
BLAST of Lsi03G000080 vs. TAIR10
Match: AT2G28090.1 (AT2G28090.1 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 85.5 bits (210), Expect = 8.8e-17 Identity = 73/207 (35.27%), Postives = 105/207 (50.72%), Query Frame = 1
BLAST of Lsi03G000080 vs. TAIR10
Match: AT3G02960.1 (AT3G02960.1 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 62.8 bits (151), Expect = 6.1e-10 Identity = 39/125 (31.20%), Postives = 67/125 (53.60%), Query Frame = 1
BLAST of Lsi03G000080 vs. NCBI nr
Match: gi|659072031|ref|XP_008463112.1| (PREDICTED: keratin, type I cytoskeletal 9-like isoform X1 [Cucumis melo]) HSP 1 Score: 406.4 bits (1043), Expect = 6.4e-110 Identity = 240/299 (80.27%), Postives = 253/299 (84.62%), Query Frame = 1
BLAST of Lsi03G000080 vs. NCBI nr
Match: gi|659072033|ref|XP_008463119.1| (PREDICTED: aspartate, glycine, lysine and serine-rich protein-like isoform X2 [Cucumis melo]) HSP 1 Score: 406.4 bits (1043), Expect = 6.4e-110 Identity = 240/299 (80.27%), Postives = 253/299 (84.62%), Query Frame = 1
BLAST of Lsi03G000080 vs. NCBI nr
Match: gi|449459106|ref|XP_004147287.1| (PREDICTED: protein FAM98B-like [Cucumis sativus]) HSP 1 Score: 392.9 bits (1008), Expect = 7.3e-106 Identity = 235/300 (78.33%), Postives = 248/300 (82.67%), Query Frame = 1
BLAST of Lsi03G000080 vs. NCBI nr
Match: gi|567863674|ref|XP_006424491.1| (hypothetical protein CICLE_v10028824mg [Citrus clementina]) HSP 1 Score: 214.5 bits (545), Expect = 3.6e-52 Identity = 158/302 (52.32%), Postives = 190/302 (62.91%), Query Frame = 1
BLAST of Lsi03G000080 vs. NCBI nr
Match: gi|703157783|ref|XP_010111816.1| (hypothetical protein L484_020605 [Morus notabilis]) HSP 1 Score: 214.2 bits (544), Expect = 4.7e-52 Identity = 162/307 (52.77%), Postives = 188/307 (61.24%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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