Lsi02G030070 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCCTGCTGTTAATGCTTTGAAGTTGGACATATGGACTCCAATGATTGAGAAATCCAGCATGAACTGGATATGTGGAAAGTTCCTTTCCTTTCAGAAGGGTGGTTGTTTCTGTTGCTCAAGCTTCTTGGTCAGTATGGTAGTATCCCAACCTACTTTCTCCTTTTAAGTTTCCTACCAAGGTTAGATCCTCAATTTATCAAGTGGGATATCATTTTGTTGCGCTAAGATAAGGGATTGATAGACTTCTGGGTAAGTTCAAGAATGGGCCTCGCCTCCTATTGGGTTTGACATTTTCCCCTTCATAGAAGTTGCTTGTGGTACTCTGTGATTGCCGAGTATTTAAGGTGGTGAAAGCCTTCTTTTAAATGTTTGGTTGGAATCAAGCTTCTTGGCCAGTATGGCAGTATCCCAACCTACTTTCTCCTTTTAAGTTTCCTACCAAGGTTAGATCCTCAATTTATCAAGTGGGATATCATTTTGTTGTGCTAAGATAAGGGATTGATAGACTTCTGGGTAATTTCAAGAATGGGCCTCCCCTCCTATTGGGTTTGACATTTTCCCCTTCATAGAAGTTGCTTGTGGTACTCTGTGATTGCCGAGTATTTAAGGTGGTGAAAGCCTTCTTTTGAATGTTTGGTTGGAATCAAGCTTCTTGGCCAGTATGGCAGTATCCCAACCTACTTTCTCCTTTTAAGTTTCCTACCAAGGTTAGATCCTCAATTTATCAAGTGGGATATCATTTTGTTGCACTAAGATAAGGGATTGATAGACTTCTGGGTAAGTTCAAGAATGGGCCTCGCCTCCTATTGGGTTTGACATTTTCCCCTTCATAGAAGTTGCTTGTGGTACTCTGTGATTGCCGAGTATTTAAGGTGGTGAAAGCCTTCTTTTGAATGTTTGGTTGGAATCAAGCTTCTTGGCCAGTATGGCAGTATCCCAACCTACTTTCTCCTTTTAAGTTTCCTACCAAGGTTAGATCCTCAATTTATCAAGTGGGATATCATTTTGTTGCGCTAAGATAAGGGATTGATAGACTTCTGGGTAATTTCAAGAATGGGCCTCCCCTCCTATTGGGTTTGACATTTTCCCCTTCATAGAAGTTGCTTGTGGTACTCTGTGATTGCCGAGTATTTAAGGTGGTGAAAGCCTTCTTTTGAATGTTTGGTTGGAAATTGGTCAGAGAATCTTTGATGAAGGGCTAGACATTAGCCAGCACTTGGGAGGGAATCAAAACTTTAGGCTGGTTTTTATAATATCTGTTATGGCTTATGTATTTACGATGTTTTGTTCATTCTTTCCAAGTAGAGCAGTTCTTTTACACGTGCTTTTCATTTTCAATAATAAAAAAAGCTTTTTCCTATTTTCAATTGAAAAATACAAACAAGAAACAGAAAAGATACGAAACATGTACCTAGAAAAAAATGAATTCAAGGATAACGAAAAACAATGTCAGAGAAATGAAAGACTTATTGAGAACCCAACAAAAAAACCACCTGAAAGGACGAAGCATAATAAGTAAATAAATGGAGATATCAAAACCCATGTGAAGAATGAGCACAACGGACTCTTCAACAGTAAAGCTAGATCTATAGATAGGCTTTGGGACCAAGTTCTTTTGGTTGGGTTATCATGGTCAAATATTTTTGTTTCTTTCAAATCTTATAGTCTGTCTCTCTCTCTCTCTCTTTTTTTTTCCTTTTGTGCCAGTTGGAAGAGGTGATGTAGCTTCCTTAGCTTGGTGTTTGGCTTTCTTCCCCTTTCTTTAATTTTGTATCTTCTATGAAATGCACTGTGTTTCTCATTGGGAGAAAAGAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAGAAAAAGTTGCAGCAACAGTAGCAACAGATTTGGAGATGAAGAAGCAATTTAAGAACATATTTAGCATGAGGGAGAATTTGATAGGAATGTGAAAGATGGAAGATTTAAGACAAAGAAAAGAGATGCGGTTATTTTGAGAAACACAGAAGATAACTTTAGTCACTTTCCAAACTTTTCATAATATATTAGGTCTTAGACATTGTTTTTCATAATCAAACGACTAAATGTGCTTTCTTCTTTTCCTTGTATTTTCGTTGTTTTGTTAATTAAGACTTACACCAAAACTCTGAAATTTCTTACAAGTATCCTGACCTTTAATTTTAAACAGTGCAGATTTGTAATTTTAAACCTCTAGTGGATGTCGGTTAGTTTTTTTTTCTTTCTTTCTTTTTTTAATTTATTATTTTTATTGGAAGGCGAGGAAATTAAAAGCTGTGGTATTCTGCACATGATAAACTTCTGTTGAACACCAGCATTAGATTTCCATGCTTCTTATCATTTTATTTTTTATTCTAATGTTGTTTGATTACGTATTTATAAATTATAATTATTGCCATCAATATTTGATTTATTGATCCTCACTTTAAGGCGTTTCTTCTGTGCTTAAGTGGCCTGCTTCCATTAACAACATGCTTAGATCTAGAAGGCACTTTAACTCATGCTAAAACTGAATTTTGGACTTTTTTATGGATCATTTTGAAATGGCCATCTGTGCTGGCATGAACTTGTACAAAAATTGTGAAAGTGGGTGGTTCTGAACTTTTCTATTCTTTAATTAGTTGTCATGATTACCTTCTTATACTTTCCTCTGTATCAGGGAAAGAGATGGGGTGGATGTTGGGGTGCATTATCTTGTTTTCACGCCCAGAAAGGAGAGAAGCGCATTGTACCTGCATCTCGTTTACCTGAGGGCAATGCTGTGACAACCCAACCTAATGGACCTCAAGCAGCAGGAATGAGCAACCAGGCCACAGTGATAACTCCATCCCTTCTAGCCCCACCTTCTTCACCAGCATCTTTTACAAATTCTGCACTCCCTTCAACAGTCCAATCACCTAGCTGTTTCATGTCGTTGTCTGCCAACTCACCTGGAGGTCCTTCATCCACAATGTTTGCTACAGGGCCATATGCGCACGAAACACAGCTGGTCTCTCCTCCTATTTTCTCAGCCTTCACCACTGAACCGTCAACTGCTCCCCTCACCCCCCCACCTGAACTAGCTCACCTAACCACACCTTCTTCCCCTGATGTGCCATTTGCTCAGTTCCTATCCTCATCGGTGGATCTCAAAGGAACTGGAAAGGCCAATTACATTGCTTCAAATGATCTTCAAGCAACATATTCTCTCTACCCTGGAAGTCCTGCCAGTAGCCTCGTGTCACCAATTTCAAGGACCTCTGGCGATTGCTTATCATCTTCATTTCCTGAGAGGGACTTTCCACCACAGTGGAATCCTTCAGCTTCTCTCCAAGATGGAAAATATCCAAGAAGTGGTTCTGGTCGGCTATTTGGAAATGAGAAAGCTGGTACATCATTGGCATCTCAGGATTCTAATTTCTTCTGCCCTGCTACATTTGCACAATTCTATCTGGACAATCCACCATTCCCTAATACTGGTGGGAGGTTAAGCGTATCGAAGGATTCAGATGCCTACTCCTCTAGTGGGAATGGATACCAGAACCGGCACAGTAAGTCTCCAAAACAAGATGTGGAGGAAATAGAAGCTTACCGAGCATCGTTTGGTTTCAGTGCGGATGAAATTATAACTACTACACAGTATGTGGAGATATCTGATGTAATGGAGGATTCCTTTACTATGAGACCTTTTACCTCAACTAGTTTGTCAGCAGAAGAAAGTATTGAACCTCCATTGTTGGGTGAAAAACTAAAATCCACACATACAACTTCACAGAGTCAGAGAAGTAGTAAATCAGCACCTGAGGTTGTCGAAAAGGAAACCTGCACTGAAGTGTTGGCATTATGCAATGGTTATAAAGGTGAGCTGTTGTTCCCTGTTACTACAAGCACTGAAGCACACACTTGTTCCATAAAATGAGAAATCAAAAGAAAATGATACAGATATAGTTTGGTGAACGTGTTTAAAATGTCACTATTAGATTTTTTTACTTTTCTTAGTTTTTCTTCCCCTGCGAGCTATCGTTTTATATCGTGACCCACAATTCTGATACTATAAATAGTTAAGACTCTCCATTGCACACCTTTGGTTACAGTTACCTGTTTGATGCAGATAATAAATTGCAAAGACAACCTGGTAACATGTCAGGATCAAGTACTTCAAACCAAGTTGAAAAAGACGTATTCTCAAGGATAGGGTCATTCAAAAATAGTCGCAAGTATAATCTTGGTTTATCCTGCTCTGATGCAGAAGTTGACTACAGAAGGGGAAGGAGCCTAAGGGAGACCAAGGGAGATTTTTCATGGCATGACTAA ATGTCTCCTGCTGTTAATGCTTTGAAGTTGGACATATGGACTCCAATGATTGAGAAATCCAGCATGAACTGGATATGTGGAAAGTTCCTTTCCTTTCAGAAGGGTGGTTGTTTCTGTTGCTCAAGCTTCTTGGTCAGTATGGGAAAGAGATGGGGTGGATGTTGGGGTGCATTATCTTGTTTTCACGCCCAGAAAGGAGAGAAGCGCATTGTACCTGCATCTCGTTTACCTGAGGGCAATGCTGTGACAACCCAACCTAATGGACCTCAAGCAGCAGGAATGAGCAACCAGGCCACAGTGATAACTCCATCCCTTCTAGCCCCACCTTCTTCACCAGCATCTTTTACAAATTCTGCACTCCCTTCAACAGTCCAATCACCTAGCTGTTTCATGTCGTTGTCTGCCAACTCACCTGGAGGTCCTTCATCCACAATGTTTGCTACAGGGCCATATGCGCACGAAACACAGCTGGTCTCTCCTCCTATTTTCTCAGCCTTCACCACTGAACCGTCAACTGCTCCCCTCACCCCCCCACCTGAACTAGCTCACCTAACCACACCTTCTTCCCCTGATGTGCCATTTGCTCAGTTCCTATCCTCATCGGTGGATCTCAAAGGAACTGGAAAGGCCAATTACATTGCTTCAAATGATCTTCAAGCAACATATTCTCTCTACCCTGGAAGTCCTGCCAGTAGCCTCGTGTCACCAATTTCAAGGACCTCTGGCGATTGCTTATCATCTTCATTTCCTGAGAGGGACTTTCCACCACAGTGGAATCCTTCAGCTTCTCTCCAAGATGGAAAATATCCAAGAAGTGGTTCTGGTCGGCTATTTGGAAATGAGAAAGCTGGTACATCATTGGCATCTCAGGATTCTAATTTCTTCTGCCCTGCTACATTTGCACAATTCTATCTGGACAATCCACCATTCCCTAATACTGGTGGGAGGTTAAGCGTATCGAAGGATTCAGATGCCTACTCCTCTAGTGGGAATGGATACCAGAACCGGCACAGTAAGTCTCCAAAACAAGATGTGGAGGAAATAGAAGCTTACCGAGCATCGTTTGGTTTCAGTGCGGATGAAATTATAACTACTACACAGTATGTGGAGATATCTGATGTAATGGAGGATTCCTTTACTATGAGACCTTTTACCTCAACTAGTTTGTCAGCAGAAGAAAGTATTGAACCTCCATTGTTGGGTGAAAAACTAAAATCCACACATACAACTTCACAGAGTCAGAGAAGTAGTAAATCAGCACCTGAGGTTGTCGAAAAGGAAACCTGCACTGAAGTGTTGGCATTATGCAATGGTTATAAAGATAATAAATTGCAAAGACAACCTGGTAACATGTCAGGATCAAGTACTTCAAACCAAGTTGAAAAAGACGTATTCTCAAGGATAGGGTCATTCAAAAATAGTCGCAAGTATAATCTTGGTTTATCCTGCTCTGATGCAGAAGTTGACTACAGAAGGGGAAGGAGCCTAAGGGAGACCAAGGGAGATTTTTCATGGCATGACTAA ATGTCTCCTGCTGTTAATGCTTTGAAGTTGGACATATGGACTCCAATGATTGAGAAATCCAGCATGAACTGGATATGTGGAAAGTTCCTTTCCTTTCAGAAGGGTGGTTGTTTCTGTTGCTCAAGCTTCTTGGTCAGTATGGGAAAGAGATGGGGTGGATGTTGGGGTGCATTATCTTGTTTTCACGCCCAGAAAGGAGAGAAGCGCATTGTACCTGCATCTCGTTTACCTGAGGGCAATGCTGTGACAACCCAACCTAATGGACCTCAAGCAGCAGGAATGAGCAACCAGGCCACAGTGATAACTCCATCCCTTCTAGCCCCACCTTCTTCACCAGCATCTTTTACAAATTCTGCACTCCCTTCAACAGTCCAATCACCTAGCTGTTTCATGTCGTTGTCTGCCAACTCACCTGGAGGTCCTTCATCCACAATGTTTGCTACAGGGCCATATGCGCACGAAACACAGCTGGTCTCTCCTCCTATTTTCTCAGCCTTCACCACTGAACCGTCAACTGCTCCCCTCACCCCCCCACCTGAACTAGCTCACCTAACCACACCTTCTTCCCCTGATGTGCCATTTGCTCAGTTCCTATCCTCATCGGTGGATCTCAAAGGAACTGGAAAGGCCAATTACATTGCTTCAAATGATCTTCAAGCAACATATTCTCTCTACCCTGGAAGTCCTGCCAGTAGCCTCGTGTCACCAATTTCAAGGACCTCTGGCGATTGCTTATCATCTTCATTTCCTGAGAGGGACTTTCCACCACAGTGGAATCCTTCAGCTTCTCTCCAAGATGGAAAATATCCAAGAAGTGGTTCTGGTCGGCTATTTGGAAATGAGAAAGCTGGTACATCATTGGCATCTCAGGATTCTAATTTCTTCTGCCCTGCTACATTTGCACAATTCTATCTGGACAATCCACCATTCCCTAATACTGGTGGGAGGTTAAGCGTATCGAAGGATTCAGATGCCTACTCCTCTAGTGGGAATGGATACCAGAACCGGCACAGTAAGTCTCCAAAACAAGATGTGGAGGAAATAGAAGCTTACCGAGCATCGTTTGGTTTCAGTGCGGATGAAATTATAACTACTACACAGTATGTGGAGATATCTGATGTAATGGAGGATTCCTTTACTATGAGACCTTTTACCTCAACTAGTTTGTCAGCAGAAGAAAGTATTGAACCTCCATTGTTGGGTGAAAAACTAAAATCCACACATACAACTTCACAGAGTCAGAGAAGTAGTAAATCAGCACCTGAGGTTGTCGAAAAGGAAACCTGCACTGAAGTGTTGGCATTATGCAATGGTTATAAAGATAATAAATTGCAAAGACAACCTGGTAACATGTCAGGATCAAGTACTTCAAACCAAGTTGAAAAAGACGTATTCTCAAGGATAGGGTCATTCAAAAATAGTCGCAAGTATAATCTTGGTTTATCCTGCTCTGATGCAGAAGTTGACTACAGAAGGGGAAGGAGCCTAAGGGAGACCAAGGGAGATTTTTCATGGCATGACTAA MSPAVNALKLDIWTPMIEKSSMNWICGKFLSFQKGGCFCCSSFLVSMGKRWGGCWGALSCFHAQKGEKRIVPASRLPEGNAVTTQPNGPQAAGMSNQATVITPSLLAPPSSPASFTNSALPSTVQSPSCFMSLSANSPGGPSSTMFATGPYAHETQLVSPPIFSAFTTEPSTAPLTPPPELAHLTTPSSPDVPFAQFLSSSVDLKGTGKANYIASNDLQATYSLYPGSPASSLVSPISRTSGDCLSSSFPERDFPPQWNPSASLQDGKYPRSGSGRLFGNEKAGTSLASQDSNFFCPATFAQFYLDNPPFPNTGGRLSVSKDSDAYSSSGNGYQNRHSKSPKQDVEEIEAYRASFGFSADEIITTTQYVEISDVMEDSFTMRPFTSTSLSAEESIEPPLLGEKLKSTHTTSQSQRSSKSAPEVVEKETCTEVLALCNGYKDNKLQRQPGNMSGSSTSNQVEKDVFSRIGSFKNSRKYNLGLSCSDAEVDYRRGRSLRETKGDFSWHD
BLAST of Lsi02G030070 vs. Swiss-Prot
Match: Y1666_ARATH (Uncharacterized protein At1g76660 OS=Arabidopsis thaliana GN=At1g76660 PE=2 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 4.8e-125 Identity = 266/458 (58.08%), Postives = 317/458 (69.21%), Query Frame = 1
BLAST of Lsi02G030070 vs. TrEMBL
Match: A0A0A0L1G3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G665140 PE=4 SV=1) HSP 1 Score: 827.0 bits (2135), Expect = 1.2e-236 Identity = 425/460 (92.39%), Postives = 439/460 (95.43%), Query Frame = 1
BLAST of Lsi02G030070 vs. TrEMBL
Match: B9GPK6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s00330g PE=4 SV=2) HSP 1 Score: 646.4 bits (1666), Expect = 3.0e-182 Identity = 340/465 (73.12%), Postives = 384/465 (82.58%), Query Frame = 1
BLAST of Lsi02G030070 vs. TrEMBL
Match: F6I6Y3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g00140 PE=4 SV=1) HSP 1 Score: 644.8 bits (1662), Expect = 8.7e-182 Identity = 340/468 (72.65%), Postives = 389/468 (83.12%), Query Frame = 1
BLAST of Lsi02G030070 vs. TrEMBL
Match: V4TGC4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000992mg PE=4 SV=1) HSP 1 Score: 644.4 bits (1661), Expect = 1.1e-181 Identity = 334/463 (72.14%), Postives = 388/463 (83.80%), Query Frame = 1
BLAST of Lsi02G030070 vs. TrEMBL
Match: A0A067KKH5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08002 PE=4 SV=1) HSP 1 Score: 644.4 bits (1661), Expect = 1.1e-181 Identity = 337/466 (72.32%), Postives = 382/466 (81.97%), Query Frame = 1
BLAST of Lsi02G030070 vs. TAIR10
Match: AT1G76660.1 (AT1G76660.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 449.5 bits (1155), Expect = 2.7e-126 Identity = 266/458 (58.08%), Postives = 317/458 (69.21%), Query Frame = 1
BLAST of Lsi02G030070 vs. TAIR10
Match: AT5G52430.1 (AT5G52430.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 135.2 bits (339), Expect = 1.1e-31 Identity = 107/253 (42.29%), Postives = 139/253 (54.94%), Query Frame = 1
BLAST of Lsi02G030070 vs. TAIR10
Match: AT4G25620.1 (AT4G25620.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 124.8 bits (312), Expect = 1.5e-28 Identity = 91/203 (44.83%), Postives = 117/203 (57.64%), Query Frame = 1
BLAST of Lsi02G030070 vs. TAIR10
Match: AT1G63720.1 (AT1G63720.1 BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1)) HSP 1 Score: 123.2 bits (308), Expect = 4.5e-28 Identity = 84/207 (40.58%), Postives = 120/207 (57.97%), Query Frame = 1
BLAST of Lsi02G030070 vs. NCBI nr
Match: gi|659105232|ref|XP_008453041.1| (PREDICTED: uncharacterized protein At1g76660 [Cucumis melo]) HSP 1 Score: 834.7 bits (2155), Expect = 8.5e-239 Identity = 428/460 (93.04%), Postives = 442/460 (96.09%), Query Frame = 1
BLAST of Lsi02G030070 vs. NCBI nr
Match: gi|449466510|ref|XP_004150969.1| (PREDICTED: uncharacterized protein At1g76660 [Cucumis sativus]) HSP 1 Score: 827.0 bits (2135), Expect = 1.8e-236 Identity = 425/460 (92.39%), Postives = 439/460 (95.43%), Query Frame = 1
BLAST of Lsi02G030070 vs. NCBI nr
Match: gi|1009126185|ref|XP_015880014.1| (PREDICTED: uncharacterized protein At1g76660 [Ziziphus jujuba]) HSP 1 Score: 671.8 bits (1732), Expect = 9.5e-190 Identity = 343/464 (73.92%), Postives = 394/464 (84.91%), Query Frame = 1
BLAST of Lsi02G030070 vs. NCBI nr
Match: gi|645255247|ref|XP_008233411.1| (PREDICTED: uncharacterized protein At1g76660 isoform X1 [Prunus mume]) HSP 1 Score: 659.4 bits (1700), Expect = 4.9e-186 Identity = 349/467 (74.73%), Postives = 390/467 (83.51%), Query Frame = 1
BLAST of Lsi02G030070 vs. NCBI nr
Match: gi|743874734|ref|XP_011034746.1| (PREDICTED: uncharacterized protein At1g76660-like isoform X3 [Populus euphratica]) HSP 1 Score: 649.8 bits (1675), Expect = 3.9e-183 Identity = 336/461 (72.89%), Postives = 381/461 (82.65%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |