Lsi02G029780 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi02G029780
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr02 : 35876547 .. 35881450 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGTAGATTAAAATGAGGATTATGAGGAAGAAGAAGATGGGTTTTGTTATGGAAATGGTTTAATTTTGGATGGTTTTTCGTTTTTGAGGATTTACGTGAACGAGCTGTTTAATCGCTCGGTCGTTTTATGTTATCTTCAAATTGCAAATCTCCAAAGTAGGATTCTTTACAATCTTTTCTCCTTCTTCTTTTTCTCCCTTTTTTGGCAAACGAATTAATTCATTTCCTATTTTCACTTTTTTAACTTTTTTGGATTTGGATGGAAGAAGAAATTAACTAAATTGCCAATCTACTCCTTCATCTTTCAGCTGCATCTATTTAGTCTTAACTTTATAAACTATACATATTTCAAAAAAAAAAAAAAAACCCTTTAAAAAGTATTAAATAGGTCTGAATTCTCAATTTTATATTTAGTAAATTAATAATCAATTTTGTGTTAAAAATAGATCTTTTAGTTTTGATTTTTTTTTCCTTAATAGATTATCTACTTATTCAATAAATTTTAAAAATATTTAGGCATACTACATACAAATTTTCAAGTTTATGGTCCCTTTAAATTTTGTAGAGAACTTTGTTGGTCAATCACAAATTATCACATTACTAATAATTGATAAATTTGAGATCAATTACAAATTTATATACATCTTTAAATTAAATTTATAGACATGAAAGTTGACAAATCAAACAACATCACTTATCTAAGCGTTAATCTATTAAGGCGTCCAATCAAATTATGTCACGTGCCAATCGGGAGACCCGCTCATAGGATCCCTCAAAATTAGGAGGCCATATTTTATGTGCCTATTCAAAATTCAAACATCCATTGAGTTATTATCATTCACTTAGAGGAATCAAGGTTTAAAGGTTAGAAACTTTTAACAAATTGATCATATCTTGAAATGTCGTGTGAACATACTTACGAAGTTATCACAACGGTTTATAAGGCTAAACTTGTAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTACATAATGTTGTTTGTAGCCATGGATTCGAAATGTAGAATAAATTACTAATACTTGAAAGAAAATTGTATTAAAGTTGACATTTGTTTAAAGAATATATGGTCTTTCTTTTAAAAGAATATAGATGTTTTGAAGTGGAGCACATGGCACTAAGATTGGCATGTAATAGTTTAATGGTTTTGAACTTCTAAATTGCTTTTACATTTTTTTTCTTAAGGTTAATATGTCGCGGATTTCAATAATATTATCAAATTTTTAATTTAAATAAAAGAGCCTACAAATTTGGTTAAATTTTAAATAATTATGAGTTTGTTTGGCAGAGAATTTGAAAACAGAAATTTAAAACAATAGATTCAAGATTTTCTATCAAATAAGTCCGTCCTAAATATCATCTAATTTTATCATTTATTTCAAAATTATTCCTTTCTATTTAAAAAATAGTCTATGACTATCACTATTTACTCTACTAACTAGACATGTTTAAGCAGAAAAACTACTGATTTTTCCTTTTCCTATTTTATTGATTATTGATAGTTATAGAGATATATTGAATAATTTCTTTGTAGTTTTGATTTTTTATTCAATAATTAATTTAAGATAAAAGTCCAATTAAATTTTGAATCTAAATTTTTTTTTACTAAATTACACTCCCAATTTTCCAAGGGATCTCTCTTTTTCTTTCTTATTTTTTACATTTCGATGAGATTTTTTTTCCAACTTCATGCCTTTTCTCCAAATGTTGTGTTGTTTGATACATTTACTCCAGTCTCTTTTTTTTTTTTACTTTGATTTTTGTCTATATATACTACAGATATAGCAAAATTTTATTGTCTATTGCAGATATACAGTAAAATTTTATTATATTTGTAAATATTTTAAGTAGTTTTGTCATTTAAAATAATTTTTCATACGTTAAATTAGAACTACAAAATAAAATAATTAGATGCCAAATTTTAAAACCACTCTGATTATGGGATATGAGAAGACAATTTTCCACCATAACTTTATAAGCTAAAGAGTGAGCCAACATATTTCAACTTCAATAGGAGTGAATGCGAAGGAAACCTCCCCGCAATTTGAAGCCAAAGTCTTGTTCTCGTCCACAGCAAAAATCACTTTAGTGAAAGTCGATTGATTGGTTGTTAAAAAGATTACCACCTCCAAAACAGACAGTTTTCATAAACATATGGACCATTGAAACTTAATCTTATTACGATGATCAATTGCCTTTATATCCATCTGACGAACATGTCCAAGATGGTCATGAATCACCCATCTCAACCATCCAACCTGGTGGGAGGAGCATCATGAAGCATCTATATATGTATTCAACTTTCACATATCACATGTAAGTTCAGTATGACAACCCTAAATGGGGTAAATAGAGTTTATTCAAACTAATTAAAATTTTTACTAATGTTGATCAAATTAAGCAAATTAATAAACTTTTTGCTAATAACTAATTTAAACAAGAATTTCATACAATTAAATTCAACCCAAAGTAATCAAAAAATTAATAATAATACTTTAAAACACCATATTTGATTATTATAACAAGATTGATAATGGATATAGAAATTTAAGAATTATCAATCAAAATATCCCAATATAAGCAATTAATTTCAAGAACAAAAGTTGCAATTAATTTTATCGAATATTTCTACTAATCAGAGTTCAATCGTTGTACTACTCTTTTTGCAAATTCAAAAGCAAACTCAATCGTTTCTACGAATAATGATCAAAGTGTTATAACTACTATTTTTTTGGGATCAAGAACAACCCCCAACAATCACTGGACTGCATTTTTTTAGCTAGTTTTTTTTTTTTTTTTTAACTTTAACTTTACCATTATTATATTACATACATAAGGTTTTCTTATACATGTGTGCGTATGTATGCATGTATCTATGTATGTATATATGTGGGATATTTATTTTAAAGGTTGAGACTAGATTGATTAGGCATAGGTTACTTTTTTTCTAATTAAATCAAGTAAGTTCGTCGAACAAGACACCACTTTCGGCGATCGCCGCCGGCCAAGTATATAACAATATTAATAAAAAAAAACACTTTTAATATATAACAAACTAAACAAACTTGTATATAAAAACACATTTTAAGAAAAAATTGTCAAACACATATATGTTATTATTTTAAAGAGTTTTTATTAAAAGTGTTTAAATAAAAATGAATTTTTTAAAAACATTTTTTCATTTGTTTTCGTTGGTCAATTTAATTAGCTTACATATTTAAAATCATTTTCTAAACGTAAAAGTTTAAAATGTTGGAAACAATTTAGTGGCCAAATAAAAATTAAAACTCAAAATTTATGATAATCCCTCAAATATAATTTGATAAAAAAAATTATAATTTTTCAATAATTGAATTTAATATTAGAGTACTAGTTTATTTAAATTTTAAGTTAGTGTGGATAATTTTTAAATTAGTTAAAAGTGACAAGTCTATGAAATTTTATTACAAAACTTAGTAAAATTAAAATATTATATTATTAATATAATAAATTAAATAAATTATAATCTTAGTCAAAATCTCTATTTAAAATTTTAAAAAAAAATTTGACTGATTGTTTAGTTTATTTTAAACTTAACTATATTAAAATAATTAAAATGACAAATCTAATTCAAAATTTAACAACACATTGAATACGAGAAAATATTTCTTAAACCCAAACTTAGCTTTGACCTAGGGTTTGACCAAGGTAAAAAATTATATATTAGATTTTTTTTCATAAAGCTCCTACAACGCCCCCCCCCACGCCGCCGTTCACCGCCCCGCCGGTCATAGCCCCCCGCCGCCGCCGCTTGCTTCCGTTCGCGCCGCCGACCCGTGTCGAACGCCGACTGGCCGCTGGCAGTAACGTCAAGGCCTTTCTCTCTCTTTCTCACAGCCCTCTCTCCCTCTCATACTTCATTCGATCGCCGTCTGCAGCCAGCACTGTGCCTCCGCCGCTCGGATCGTTGTTCTCCGACGCGTAG

mRNA sequence

ATGAAAGCTCCTACAACGCCCCCCCCCACGCCGCCGTTCACCGCCCCGCCGGTCATAGCCCCCCGCCGCCGCCGCTTGCTTCCGTTCGCGCCGCCGACCCGTGTCGAACGCCGACTGGCCGCTGGCAGTAACGTCAAGGCCTTTCTCTCTCTTTCTCACAGCCCTCTCTCCCTCTCATACTTCATTCGATCGCCGTCTGCAGCCAGCACTGTGCCTCCGCCGCTCGGATCGTTGTTCTCCGACGCGTAG

Coding sequence (CDS)

ATGAAAGCTCCTACAACGCCCCCCCCCACGCCGCCGTTCACCGCCCCGCCGGTCATAGCCCCCCGCCGCCGCCGCTTGCTTCCGTTCGCGCCGCCGACCCGTGTCGAACGCCGACTGGCCGCTGGCAGTAACGTCAAGGCCTTTCTCTCTCTTTCTCACAGCCCTCTCTCCCTCTCATACTTCATTCGATCGCCGTCTGCAGCCAGCACTGTGCCTCCGCCGCTCGGATCGTTGTTCTCCGACGCGTAG

Protein sequence

MKAPTTPPPTPPFTAPPVIAPRRRRLLPFAPPTRVERRLAAGSNVKAFLSLSHSPLSLSYFIRSPSAASTVPPPLGSLFSDA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G029780.1Lsi02G029780.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi02G029780Bottle gourd (USVL1VR-Ls)lsilsiB120
Lsi02G029780Cucumber (Gy14) v1cgylsiB577
Lsi02G029780Cucurbita maxima (Rimu)cmalsiB233
Lsi02G029780Cucurbita maxima (Rimu)cmalsiB345
Lsi02G029780Cucurbita maxima (Rimu)cmalsiB412
Lsi02G029780Cucurbita maxima (Rimu)cmalsiB826
Lsi02G029780Cucurbita moschata (Rifu)cmolsiB221
Lsi02G029780Cucurbita moschata (Rifu)cmolsiB333
Lsi02G029780Cucurbita moschata (Rifu)cmolsiB398
Lsi02G029780Cucurbita moschata (Rifu)cmolsiB813
Lsi02G029780Cucurbita pepo (Zucchini)cpelsiB110
Lsi02G029780Cucurbita pepo (Zucchini)cpelsiB257
Lsi02G029780Cucurbita pepo (Zucchini)cpelsiB450
Lsi02G029780Cucurbita pepo (Zucchini)cpelsiB493
Lsi02G029780Wild cucumber (PI 183967)cpilsiB178
Lsi02G029780Wild cucumber (PI 183967)cpilsiB517
Lsi02G029780Cucumber (Chinese Long) v2culsiB179
Lsi02G029780Cucumber (Chinese Long) v2culsiB503
Lsi02G029780Melon (DHL92) v3.5.1lsimeB185
Lsi02G029780Melon (DHL92) v3.5.1lsimeB214
Lsi02G029780Watermelon (Charleston Gray)lsiwcgB160
Lsi02G029780Watermelon (Charleston Gray)lsiwcgB207
Lsi02G029780Watermelon (97103) v1lsiwmB169
Lsi02G029780Watermelon (97103) v1lsiwmB189
Lsi02G029780Cucumber (Gy14) v2cgyblsiB165
Lsi02G029780Cucumber (Gy14) v2cgyblsiB472
Lsi02G029780Melon (DHL92) v3.6.1lsimedB194
Lsi02G029780Melon (DHL92) v3.6.1lsimedB224
Lsi02G029780Silver-seed gourdcarlsiB105
Lsi02G029780Silver-seed gourdcarlsiB177
Lsi02G029780Silver-seed gourdcarlsiB682
Lsi02G029780Silver-seed gourdcarlsiB936
Lsi02G029780Cucumber (Chinese Long) v3cuclsiB195
Lsi02G029780Cucumber (Chinese Long) v3cuclsiB538
Lsi02G029780Watermelon (97103) v2lsiwmbB203
Lsi02G029780Watermelon (97103) v2lsiwmbB213
Lsi02G029780Wax gourdlsiwgoB217
Lsi02G029780Wax gourdlsiwgoB270
Lsi02G029780Wax gourdlsiwgoB284