Lsi02G028310 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi02G028310
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPyridoxamine 5-phosphate oxidase-related fmn-binding protein
Locationchr02 : 34501343 .. 34506597 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTCTTTTGGGCAGTGGTATAGAATATACTTTCGGACCAGCTTTCTCTTTTCTAGTCCTAATCTCAATAGTCAATTCTATAAAGTAATAACTTTGTGCATTGCTTCTTGTTTTTTTTAATTTTGGTGGTTATATGTTTTTCTTCTTCATGCAGATCCAATTTTTTCTTTTTCACCTCTGGCCATTCATACGCGGAATTTGTTGGCGGACCCAAGATGCACTGTTGTTGTGCAGGTGGGGGCGGTTTAACAATCAACATCTTCTATTCCTTACATTTTAGGTTTTCATGTGACATAATAGCCTTGCAGATACCTGGATGGAGTGGCTTGTCAAATGCCAGAGTTACTATTTTTGGTGATATATACCCCCTTCCAGAGGATCAACAGGTTAGTTTTACTTTGAAGATGTAGTTATTCGTATAATTAACAAGTTGAAATTCTGTTGGCTGCCTCTAGTTTCACTAGTGTAGCATCAAACTAATTACATAGGTCTTTTGGTTTTCATGCTTGATGTAGGGCTGTTTTGGGTTTTTATTCCTCTGATTAGTTTCCTTGTTTCGTTTCTGTTTTGGTTGTAATTAGTTAGCTGGTTAGTTTGTTGTAAAACTGACGAGTTGTTTTAGTTTGTTATTCGGTTGTTGGAGCCTAGCCTACATATACGGCAAACCTTGTAGTCTTTTAGGCATTGAATGAAATTCCAAGTTTTCTCCAAGAATTCTCTTAGTTTAGTTTCATCAATTCTTCTCCAATATACACATCTAGCAGTAAAATGATACTCGCTTGTTTTTGCAGGAATGGGCTCATAAGCAATACATAGCGAAGCATCAACAAGGACCTTCTCAACAGTGGGGGAATTTTTACTACTTCAGGATGCAAGACATAAGGTTTATTTCTTGTTCTTGTCTTAGTGAGTGTTTGATCTGCAGTAAAGTGATAATACTTCTTTAAATTTCCAACAATAAAAGTAGTGTGAGAAATTTTTGAAGTAGATAAGAATATTTAAAATGCTTTTAGATGAAATATTTATTCTGTAGTCAATGCTTACAAAATTAATGCTTCTCTTGTCCCAAACTCACCCTTATTGTTCAGACTTGTGGCTTGCTATGTAATTTACATTTATGCAGCTTATAGTTGGACATGTTTACTTGCAATCTATAATCTATATAAAAATAAATGGTGGTATTGGAGTTCTATTATTATTATTATTATTATTATTATTTTTTAATGCTTACGCATATCTTTGTTTCCCTTAATTGAATGAACAAAATTTTAGATGGATTGAAAGGCTAAAAGTTACATATAAAGAATTTGCAACACGTGTATGAATTATCCACCAATTCATTAAATTTGTCGATATTTTCTCTAATTTCTTAAGACAATCTTATTCAAGTTGGTGGGGTGGAAATTCTACGAGCTTCTTGACAATCAAATGTTATACAATCAATAATTGTGCTTTGAGATTAATAGAGGTGTACAAAGTTGGCCCATATATTCACAGTATAAAAGAATCTCATTCAAGTATTATTTAATTAACATTTATACTTCCATTTATCCATATTTAAGAAATATTACCATTCTTCTTTCATTGATTAAGAGCCTGATATTTGCGAAATATCTCATTCTAGTATATGCAGTTTCCCCATGTTGTGTAAGTAGCTTTGTTATAAACATTCTCCATGCATTTTACTTAAACTCTTCTTTATTTCATGAATTAAGAAAGTTCACTGGAACATTTGTTTGGAACTTTTAAAAAGAAATAGATTTTTTATTTTCATTTTGAGGCAGTTTAGCCATGTTAATTAATCGAAGCATTTTGTTTCATGTTTAAAATGAAATTATCAATAGGTAGTTTTATCACAGAACTAAGAGCTTTCTTGTAGAAATGGAAGGGTTTGTCTTTTTCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCATAATGGAAATTTTCAACCATGGTAGGTGAGGATTTGAAAATCTTAAGTTCATTTTAGTTGATGAAATTTGAAGATCCTATCAATGCTCTTAAAACTTAACCATGTGCAATGGACGCTGAGTAATTACTCTACTTTATAATTTGACCAATCTTCATCTGATTTGATTTTAAGTATGTGTAATATCCTTTTGGTTGTTTTGTTCGGACTGCTGACTTTGGGCGGACCTAATTGCTAGAATGATTTACTGTTTTCTGTTATTTACATTCCTGCCTCTGTTTTATGCTTTGTTTGCTTCTATTTTGGCTGTATCTTCGTACTCAATAATATGCTTACACGTGTCCTATCATCTCTCTATTTAATGAAATCCTTTGCCTCTGTATAAGTGCTGAGGGCATTCATTCTGCAATTCTGTTATTTCTTGGCTTTTACTAATCCTTCCTGCCTCTCTCATCATGTATATGTTTTATAGGGAAAAAAAATGTTTTGAATGACTTTGGTTCCTGCAATAACTCGACTAGACTCATTGATAGCTAAATCCATTGAGCAGATGCCCTTGTATGTTGGGTTCAACTTGTTCTCTTCTTTTTCCTTCTTTTGTTTTGTTTACTTATATATCAACATAATTTTAACGAGGATAAAATTAAGGGTGACCGAGGTAGTAGAGGGGAGCAATTACTTATGCTATATATTTGGTTGCCTTTCCTTGGGGGAATTCATAATTAAATTTTATTGCTGCGGGGCTAAAAAAATTCATAAGCTCATGCTTGGCATGTTTACCAATAAGGAAGTTGAGGTTAACGATCAGAAAAATTATCATGCTTGATTTTTTTATGTTTTTGCAGTGACATTTATTTCATTGGTGGCTTTGGGACTGTTGCGTGGGTGGATGTGAAGGAGTATGAGACCCTTCAACCTGATAAGATTGCAGTTGACGGAGGTGAGCAAAACCTTAAGGTGAGGATCTAAGTTGCAAGTTCTTCTTTTTCTTCTTTTCATCTCCTTAAAAAATTAATTTAGTTGTAACCTATGAATTATGATTTGATTGGTTTGAAAACATGGAGAGTCTTGAGAAAGTACATGGAGAAGTACATTGTCATTATTTCTTTGAAGCCTCGGTATCTTGCACTACCATAAGGGTGTGTGTAATGTTCTTTCTCAAAGTAAGCTAACGAGGGATGTTTCTTGGGATTATGTTTCTATTTTGGTTTTCTTAGTATTTGTATCTTTTTACAATCTTATTTGAACAAGATTTGTTCTATACATTGTACAACTTTGTCCTTAAGTTCTAAAGTATTTATATTTTTTTCCCTCCATATACCCCACATCTGTCTAGGAACTGAACGTGATGTTCTCAAAACCCTTGAAAGAGCTGCTGTCAGCTGAAAGTGAAGTAGACGATGCTGCTTTAATATCAATAGACAGCAAGGGAATAGATATTCGAGTTCGCCAAGGAGCTCAGGTACTAGAAGATTATAGTATCTAGATTTTAATATCTTCTAGCAACATGCATAATCTATAACTTATGCTTTTGCAGTTCAATGTCCAAAGAATATCTTTCGAAGGAGGTCATGCCGTCGAAACACTAGAGGAAGCCAAAGTTGCACTTTGGAAGCTAATAAACCAAGGGGGCGTATGCAATTTTAAAAAATAGTAAGTTGGTTGCTAAATTAGAAAAAAAGGATGTCTTTCCATCTCACATCTCGAGGCTTACAACCTACTACGCCCAATGGATGATGCGCGACAAAATACCGGGATCATACAGGCAAGGGATTATGGAAAGTCCGGATCAACAATAAGCCAGTGTAGAGTTCTAATGACTTTGTTTCGTTTTTACTTCCTATCTGGTATTTTATTGCACAAGTGAATGTGACATCCAAGTAAGCTTGATGAAAATTACCCAAGAAGTGTTGAGCAACAACGTTTATGATCTAATTTAACTACTCGATTTTAGAATACCATTTTCCCTTATTATTATTTGGGCTATTTTCCCTGTATCCGTTCTCCCTTAGTTGTTATGGGCTATTTTCCCTTATTATATGCTTACGCTTGTATAAGCCTCAGGCTTTATATTTTGCACTATTCCTTTTCCTTTGAGCTGATATATATATTTTTTCTATCATTATTGATTATTGTATGTTTCCTCTCTGTGTAAACTGTTACTCGATGGCTCTTGGTACAGTTGAAGTTGTTATCAATCGAATTTTTATGACTTCTTAAACTTAGTTCTTTGAGTATTATATGGGGTGATTATTGAGGATAATCCTAAAGCATTTTAAAAAGATTAACTCATAAACATACGAAGATTGGAATGGATGACAACTTGTAGTCTTTCCAGTAGCCTTCCGTCCAAACTAGTGTGCCTTGTGATCAGATTAGTCCAATGTAGTTGGCAACACAATGAGCTAGTTTATTAAAATTATAGAATCAATTTGAATTGACTTTCTAAGTGCTAAACAAAGTCATGAAAATGCATTTCTGTGGGTTGAAATGGCATTCTCGCATGGCAACTTTGTTTTCTTCCATGAAGCTGCTACTTTCGATCCGTTCAATACCAATTCCACGCCAAAATGCAATAGCTACTATAGGCGAATATATATACATATCACTCCGTTTTTAGCTAAATGACCACTTGTGTTTTTATAATTTTTTTTGTATTCTTTTCAATCATGTTTATAATATGAGCAAATCATTAAAGAAGTATGTGAGGAGATTTGTATGAATGACTCAAAAATTGGGCTCAAAATGCCAAATAATCCGAATTTTAAAATTCATTTGTGTGGCCACAGCAAAATTCGAATGAAACGGAGGAGGATTATCGATTTATGGTCAAATCTGGGTATGGAGTGGAAGGTCGTCGATTTCGGCCAAATCTGGGTATGGAAGGAAATGGAGTTGTCAATTTCGACCAGATCTCGTGAGGAATGGAATGGAAGGGTGAAATCACGTTAGAGCCAGAGAAGAAAAGGAAATCGCACTCGAGAAAAGGAAAAAAAGGAACAAATTTGTAACTATACTTGTCCAACATCATTTGATTTTTTTTTTTTTTTAAAAAAATGGGTCATTAGACATTTTGAGTCTTTAAAATAGGTGGGTGGTGCAATTTTTCCGAACATATGCAAACGAGTGGTGATTTAACTCAAATAAAATGTATGGATAGAACTAGAAGTATGATCAAAATTATGGTCTCTGCCGTGGCTTCTAACAGACACCATTAGGTTTAATTCAGACTTTGTATACAGTTGCTTTCCCTTATGAATTGGGATTCTTTTTAACAAATAAATGCGATTTGGTTGTGGTAAACCGGCTTAGAAGAGTTTGA

mRNA sequence

ATGGATCCAATTTTTTCTTTTTCACCTCTGGCCATTCATACGCGGAATTTGTTGGCGGACCCAAGATGCACTGTTGTTGTGCAGATACCTGGATGGAGTGGCTTGTCAAATGCCAGAGTTACTATTTTTGGTGATATATACCCCCTTCCAGAGGATCAACAGGAATGGGCTCATAAGCAATACATAGCGAAGCATCAACAAGGACCTTCTCAACAGTGGGGGAATTTTTACTACTTCAGGATGCAAGACATAAGTGACATTTATTTCATTGGTGGCTTTGGGACTGTTGCGTGGGTGGATGTGAAGGAGTATGAGACCCTTCAACCTGATAAGATTGCAGTTGACGGAGGTGAGCAAAACCTTAAGTTCAATGTCCAAAGAATATCTTTCGAAGGAGGTCATGCCGTCGAAACACTAGAGGAAGCCAAAGTTGCACTTTGGAAGCTAATAAACCAAGGGGGCACTTTGTATACAGTTGCTTTCCCTTATGAATTGGGATTCTTTTTAACAAATAAATGCGATTTGGTTGTGGTAAACCGGCTTAGAAGAGTTTGA

Coding sequence (CDS)

ATGGATCCAATTTTTTCTTTTTCACCTCTGGCCATTCATACGCGGAATTTGTTGGCGGACCCAAGATGCACTGTTGTTGTGCAGATACCTGGATGGAGTGGCTTGTCAAATGCCAGAGTTACTATTTTTGGTGATATATACCCCCTTCCAGAGGATCAACAGGAATGGGCTCATAAGCAATACATAGCGAAGCATCAACAAGGACCTTCTCAACAGTGGGGGAATTTTTACTACTTCAGGATGCAAGACATAAGTGACATTTATTTCATTGGTGGCTTTGGGACTGTTGCGTGGGTGGATGTGAAGGAGTATGAGACCCTTCAACCTGATAAGATTGCAGTTGACGGAGGTGAGCAAAACCTTAAGTTCAATGTCCAAAGAATATCTTTCGAAGGAGGTCATGCCGTCGAAACACTAGAGGAAGCCAAAGTTGCACTTTGGAAGCTAATAAACCAAGGGGGCACTTTGTATACAGTTGCTTTCCCTTATGAATTGGGATTCTTTTTAACAAATAAATGCGATTTGGTTGTGGTAAACCGGCTTAGAAGAGTTTGA

Protein sequence

MDPIFSFSPLAIHTRNLLADPRCTVVVQIPGWSGLSNARVTIFGDIYPLPEDQQEWAHKQYIAKHQQGPSQQWGNFYYFRMQDISDIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQNLKFNVQRISFEGGHAVETLEEAKVALWKLINQGGTLYTVAFPYELGFFLTNKCDLVVVNRLRRV
Homology
[Close]
BLAST of Lsi02G028310 vs. TrEMBL
Match: A0A151RP72_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_034145 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 5.6e-70
Identity = 136/193 (70.47%), Postives = 145/193 (75.13%), Query Frame = 1 

Query: 3   PIFSFSPLAIHTRNLLADPRCTVVVQIPGWSGLSNARVTIFGDIYPLPEDQQEWAHKQYI 62
           PIFSFSPLAIHTRNLLADPRCTVVVQIPGWSGLSNARVTIFGD+YPLPEDQQEWAHKQYI
Sbjct: 176 PIFSFSPLAIHTRNLLADPRCTVVVQIPGWSGLSNARVTIFGDVYPLPEDQQEWAHKQYI 235

Query: 63  AKHQQGPSQQWGNFYYFRMQDISDIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQNL- 122
           AKHQQGPSQQWGNFYYFRMQ+ISDIYFIGGFGTVAW+DVKEYETLQPDKIA DGGEQ L 
Sbjct: 236 AKHQQGPSQQWGNFYYFRMQNISDIYFIGGFGTVAWLDVKEYETLQPDKIAADGGEQYLK 295

Query: 123 -----------------------------------------KFNVQRISFEGGHAVETLE 154
                                                    +FN+QRISF+ G +VETLE
Sbjct: 296 ELNAIFSKPLKKLLSNETEVDDAALISIDSKGTDIRVRQGAQFNIQRISFDEGQSVETLE 355

[Close]
BLAST of Lsi02G028310 vs. TrEMBL
Match: I1KGP9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G020600 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 7.3e-70
Identity = 136/193 (70.47%), Postives = 145/193 (75.13%), Query Frame = 1 

Query: 3   PIFSFSPLAIHTRNLLADPRCTVVVQIPGWSGLSNARVTIFGDIYPLPEDQQEWAHKQYI 62
           PIFSFSPLAIHTRNLLADPRCT+VVQIPGWSGLSNARVTIFGD+YPLPEDQQEWAHKQYI
Sbjct: 91  PIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLSNARVTIFGDVYPLPEDQQEWAHKQYI 150

Query: 63  AKHQQGPSQQWGNFYYFRMQDISDIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQNL- 122
           AKHQQGPSQQWGNFYYFRMQ+I DIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQ L 
Sbjct: 151 AKHQQGPSQQWGNFYYFRMQNIRDIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQYLK 210

Query: 123 -----------------------------------------KFNVQRISFEGGHAVETLE 154
                                                    +FN+QRISF+ G +VETLE
Sbjct: 211 ELNAIFSKPLKKLLSNETEVDDAALISIDSKGTDIRVRQGAQFNIQRISFDEGQSVETLE 270

[Close]
BLAST of Lsi02G028310 vs. TrEMBL
Match: A0A0B2P958_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_032699 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 7.3e-70
Identity = 136/193 (70.47%), Postives = 145/193 (75.13%), Query Frame = 1 

Query: 3   PIFSFSPLAIHTRNLLADPRCTVVVQIPGWSGLSNARVTIFGDIYPLPEDQQEWAHKQYI 62
           PIFSFSPLAIHTRNLLADPRCT+VVQIPGWSGLSNARVTIFGD+YPLPEDQQEWAHKQYI
Sbjct: 182 PIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLSNARVTIFGDVYPLPEDQQEWAHKQYI 241

Query: 63  AKHQQGPSQQWGNFYYFRMQDISDIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQNL- 122
           AKHQQGPSQQWGNFYYFRMQ+I DIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQ L 
Sbjct: 242 AKHQQGPSQQWGNFYYFRMQNIRDIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQYLK 301

Query: 123 -----------------------------------------KFNVQRISFEGGHAVETLE 154
                                                    +FN+QRISF+ G +VETLE
Sbjct: 302 ELNAIFSKPLKKLLSNETEVDDAALISIDSKGTDIRVRQGAQFNIQRISFDEGQSVETLE 361

[Close]
BLAST of Lsi02G028310 vs. TrEMBL
Match: I1KGP8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G020600 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 7.3e-70
Identity = 136/193 (70.47%), Postives = 145/193 (75.13%), Query Frame = 1 

Query: 3   PIFSFSPLAIHTRNLLADPRCTVVVQIPGWSGLSNARVTIFGDIYPLPEDQQEWAHKQYI 62
           PIFSFSPLAIHTRNLLADPRCT+VVQIPGWSGLSNARVTIFGD+YPLPEDQQEWAHKQYI
Sbjct: 182 PIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLSNARVTIFGDVYPLPEDQQEWAHKQYI 241

Query: 63  AKHQQGPSQQWGNFYYFRMQDISDIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQNL- 122
           AKHQQGPSQQWGNFYYFRMQ+I DIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQ L 
Sbjct: 242 AKHQQGPSQQWGNFYYFRMQNIRDIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQYLK 301

Query: 123 -----------------------------------------KFNVQRISFEGGHAVETLE 154
                                                    +FN+QRISF+ G +VETLE
Sbjct: 302 ELNAIFSKPLKKLLSNETEVDDAALISIDSKGTDIRVRQGAQFNIQRISFDEGQSVETLE 361

[Close]
BLAST of Lsi02G028310 vs. TrEMBL
Match: A0A072UHJ3_MEDTR (Pyridoxamine 5'-phosphate oxidase family protein OS=Medicago truncatula GN=MTR_4g007990 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.2e-69
Identity = 136/193 (70.47%), Postives = 145/193 (75.13%), Query Frame = 1 

Query: 3   PIFSFSPLAIHTRNLLADPRCTVVVQIPGWSGLSNARVTIFGDIYPLPEDQQEWAHKQYI 62
           PIFSFSPLAIHTRNLLADPRCT+VVQIPGWSGLSNARVTIFGD+YPL EDQQEWAHKQYI
Sbjct: 187 PIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLSNARVTIFGDVYPLSEDQQEWAHKQYI 246

Query: 63  AKHQQGPSQQWGNFYYFRMQDISDIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQNL- 122
           AKHQQGPSQQWGNFYYFRMQ+ISDIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQ L 
Sbjct: 247 AKHQQGPSQQWGNFYYFRMQNISDIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQYLK 306

Query: 123 -----------------------------------------KFNVQRISFEGGHAVETLE 154
                                                    +FN+QRISF+ G +VETLE
Sbjct: 307 ELNAIFSKPLKKLLSNEIEVDDAALISIDSKGTDIRVRQGAQFNIQRISFDEGQSVETLE 366

[Close]
BLAST of Lsi02G028310 vs. TAIR10
Match: AT1G51560.1 (AT1G51560.1 Pyridoxamine 5'-phosphate oxidase family protein)

HSP 1 Score: 237.3 bits (604), Expect = 7.7e-63
Identity = 116/193 (60.10%), Postives = 135/193 (69.95%), Query Frame = 1 

Query: 3   PIFSFSPLAIHTRNLLADPRCTVVVQIPGWSGLSNARVTIFGDIYPLPEDQQEWAHKQYI 62
           PIFSFSPLAIHTRN+LA+PRCT+VVQIPGWS LSNARVT+FGD+YPLPE+QQEWAHKQY+
Sbjct: 193 PIFSFSPLAIHTRNILAEPRCTLVVQIPGWSCLSNARVTLFGDVYPLPEEQQEWAHKQYM 252

Query: 63  AKHQQGPSQQWGNFYYFRMQDISDIYFIGGFGTVAWVDVKEYETLQPD------------ 122
            KH QGPSQQWGNF+YFRMQ+ISDIYFIGGFGTVAW++V EYETLQPD            
Sbjct: 253 LKHHQGPSQQWGNFHYFRMQNISDIYFIGGFGTVAWINVNEYETLQPDKIAVDGGEQNLK 312

Query: 123 ------------------------KIAVDGG------EQNLKFNVQRISFEGGHAVETLE 154
                                    I++D         Q  +F +QR++FE  H VETLE
Sbjct: 313 ELNAIFSKPLRELLSSEAELDDAAIISIDSKGIDIRVRQGAQFKIQRLAFEESHGVETLE 372

[Close]
BLAST of Lsi02G028310 vs. TAIR10
Match: AT3G21140.1 (AT3G21140.1 Pyridoxamine 5'-phosphate oxidase family protein)

HSP 1 Score: 235.7 bits (600), Expect = 2.2e-62
Identity = 116/192 (60.42%), Postives = 134/192 (69.79%), Query Frame = 1 

Query: 3   PIFSFSPLAIHTRNLLADPRCTVVVQIPGWSGLSNARVTIFGDIYPLPEDQQEWAHKQYI 62
           PIF FSPLAIHTRNLL +PRC++VVQIPGWSGLSNARVT+FGD+YPL ED+QEWAHKQYI
Sbjct: 189 PIFLFSPLAIHTRNLLNEPRCSLVVQIPGWSGLSNARVTLFGDVYPLSEDEQEWAHKQYI 248

Query: 63  AKHQQGPSQQWGNFYYFRMQDISDIYFIGGFGTVAWVDVKEYETLQPD------------ 122
           AKH  GPS+QWGNF+YFRMQ+ISDIYFIGGFGTVAWVDVKEYE LQPD            
Sbjct: 249 AKHPHGPSEQWGNFHYFRMQNISDIYFIGGFGTVAWVDVKEYEGLQPDKIAVDGGERNLK 308

Query: 123 ------------------------KIAVDGG------EQNLKFNVQRISFEGGHAVETLE 153
                                    I++D         Q  +FN+QR++FE GH VETLE
Sbjct: 309 ELNAIFSKPLRELLSTESEVDDAALISIDSKGIDVRVRQGAQFNIQRLAFEEGHGVETLE 368

[Close]
BLAST of Lsi02G028310 vs. TAIR10
Match: AT3G03890.1 (AT3G03890.1 FMN binding)

HSP 1 Score: 54.7 bits (130), Expect = 7.1e-08
Identity = 32/115 (27.83%), Postives = 59/115 (51.30%), Query Frame = 1 

Query: 3   PIFSFSPLAIHTRNLLADPRCTVVVQIPGWSGLSNARVTIFGDIYPLPEDQQEWAHKQYI 62
           PI + S LA+HT++LLA+P+C++++        +  R+T+ GD   + E  Q      Y+
Sbjct: 125 PILAVSSLAVHTKDLLANPKCSLLIARDP-EDRTGLRITLHGDAVLVSEKDQAAVRSAYL 184

Query: 63  AKHQQGPSQQWGNFYYFRMQDISDIYFIGGFGTV----AWVDVKEYETLQPDKIA 114
           AKH +     +G+F + R++    + ++ G  T          +EY+  + D IA
Sbjct: 185 AKHPKAFWVDFGDFSFMRIEP-KVVRYVSGVATAFLGSGEFSKEEYQAAKVDPIA 237

[Close]
BLAST of Lsi02G028310 vs. NCBI nr
Match: gi|470136070|ref|XP_004303824.1| (PREDICTED: uncharacterized protein LOC101291644 isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 274.2 bits (700), Expect = 1.6e-70
Identity = 137/193 (70.98%), Postives = 147/193 (76.17%), Query Frame = 1 

Query: 3   PIFSFSPLAIHTRNLLADPRCTVVVQIPGWSGLSNARVTIFGDIYPLPEDQQEWAHKQYI 62
           PIFSFSPLAIHTRNLLA+PRCT+VVQIPGWSGLSNARVTIFGD+YPLPEDQQEWAHKQYI
Sbjct: 207 PIFSFSPLAIHTRNLLANPRCTLVVQIPGWSGLSNARVTIFGDVYPLPEDQQEWAHKQYI 266

Query: 63  AKHQQGPSQQWGNFYYFRMQDISDIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQNL- 122
           AKHQQGPSQQWGNFYYFRMQ+ISDIYFIGGFGTVAWVDVKEYE LQPDKIAVDGGEQ+L 
Sbjct: 267 AKHQQGPSQQWGNFYYFRMQNISDIYFIGGFGTVAWVDVKEYEALQPDKIAVDGGEQHLK 326

Query: 123 -----------------------------------------KFNVQRISFEGGHAVETLE 154
                                                    +FN+QR+SFE G +VETLE
Sbjct: 327 ELNAIFSKPLKELLSLESEVDDAAFISIDSKGTDIRVRQGAQFNIQRLSFEVGQSVETLE 386

[Close]
BLAST of Lsi02G028310 vs. NCBI nr
Match: gi|764610843|ref|XP_011467546.1| (PREDICTED: uncharacterized protein LOC101291644 isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 274.2 bits (700), Expect = 1.6e-70
Identity = 137/193 (70.98%), Postives = 147/193 (76.17%), Query Frame = 1 

Query: 3   PIFSFSPLAIHTRNLLADPRCTVVVQIPGWSGLSNARVTIFGDIYPLPEDQQEWAHKQYI 62
           PIFSFSPLAIHTRNLLA+PRCT+VVQIPGWSGLSNARVTIFGD+YPLPEDQQEWAHKQYI
Sbjct: 185 PIFSFSPLAIHTRNLLANPRCTLVVQIPGWSGLSNARVTIFGDVYPLPEDQQEWAHKQYI 244

Query: 63  AKHQQGPSQQWGNFYYFRMQDISDIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQNL- 122
           AKHQQGPSQQWGNFYYFRMQ+ISDIYFIGGFGTVAWVDVKEYE LQPDKIAVDGGEQ+L 
Sbjct: 245 AKHQQGPSQQWGNFYYFRMQNISDIYFIGGFGTVAWVDVKEYEALQPDKIAVDGGEQHLK 304

Query: 123 -----------------------------------------KFNVQRISFEGGHAVETLE 154
                                                    +FN+QR+SFE G +VETLE
Sbjct: 305 ELNAIFSKPLKELLSLESEVDDAAFISIDSKGTDIRVRQGAQFNIQRLSFEVGQSVETLE 364

[Close]
BLAST of Lsi02G028310 vs. NCBI nr
Match: gi|1012332957|gb|KYP44368.1| (hypothetical protein KK1_034145 [Cajanus cajan])

HSP 1 Score: 271.9 bits (694), Expect = 8.0e-70
Identity = 136/193 (70.47%), Postives = 145/193 (75.13%), Query Frame = 1 

Query: 3   PIFSFSPLAIHTRNLLADPRCTVVVQIPGWSGLSNARVTIFGDIYPLPEDQQEWAHKQYI 62
           PIFSFSPLAIHTRNLLADPRCTVVVQIPGWSGLSNARVTIFGD+YPLPEDQQEWAHKQYI
Sbjct: 176 PIFSFSPLAIHTRNLLADPRCTVVVQIPGWSGLSNARVTIFGDVYPLPEDQQEWAHKQYI 235

Query: 63  AKHQQGPSQQWGNFYYFRMQDISDIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQNL- 122
           AKHQQGPSQQWGNFYYFRMQ+ISDIYFIGGFGTVAW+DVKEYETLQPDKIA DGGEQ L 
Sbjct: 236 AKHQQGPSQQWGNFYYFRMQNISDIYFIGGFGTVAWLDVKEYETLQPDKIAADGGEQYLK 295

Query: 123 -----------------------------------------KFNVQRISFEGGHAVETLE 154
                                                    +FN+QRISF+ G +VETLE
Sbjct: 296 ELNAIFSKPLKKLLSNETEVDDAALISIDSKGTDIRVRQGAQFNIQRISFDEGQSVETLE 355

[Close]
BLAST of Lsi02G028310 vs. NCBI nr
Match: gi|947098802|gb|KRH47294.1| (hypothetical protein GLYMA_07G020600 [Glycine max])

HSP 1 Score: 271.6 bits (693), Expect = 1.0e-69
Identity = 136/193 (70.47%), Postives = 145/193 (75.13%), Query Frame = 1 

Query: 3   PIFSFSPLAIHTRNLLADPRCTVVVQIPGWSGLSNARVTIFGDIYPLPEDQQEWAHKQYI 62
           PIFSFSPLAIHTRNLLADPRCT+VVQIPGWSGLSNARVTIFGD+YPLPEDQQEWAHKQYI
Sbjct: 91  PIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLSNARVTIFGDVYPLPEDQQEWAHKQYI 150

Query: 63  AKHQQGPSQQWGNFYYFRMQDISDIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQNL- 122
           AKHQQGPSQQWGNFYYFRMQ+I DIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQ L 
Sbjct: 151 AKHQQGPSQQWGNFYYFRMQNIRDIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQYLK 210

Query: 123 -----------------------------------------KFNVQRISFEGGHAVETLE 154
                                                    +FN+QRISF+ G +VETLE
Sbjct: 211 ELNAIFSKPLKKLLSNETEVDDAALISIDSKGTDIRVRQGAQFNIQRISFDEGQSVETLE 270

[Close]
BLAST of Lsi02G028310 vs. NCBI nr
Match: gi|356523095|ref|XP_003530177.1| (PREDICTED: uncharacterized protein LOC100785526 [Glycine max])

HSP 1 Score: 271.6 bits (693), Expect = 1.0e-69
Identity = 136/193 (70.47%), Postives = 145/193 (75.13%), Query Frame = 1 

Query: 3   PIFSFSPLAIHTRNLLADPRCTVVVQIPGWSGLSNARVTIFGDIYPLPEDQQEWAHKQYI 62
           PIFSFSPLAIHTRNLLADPRCT+VVQIPGWSGLSNARVTIFGD+YPLPEDQQEWAHKQYI
Sbjct: 182 PIFSFSPLAIHTRNLLADPRCTLVVQIPGWSGLSNARVTIFGDVYPLPEDQQEWAHKQYI 241

Query: 63  AKHQQGPSQQWGNFYYFRMQDISDIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQNL- 122
           AKHQQGPSQQWGNFYYFRMQ+I DIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQ L 
Sbjct: 242 AKHQQGPSQQWGNFYYFRMQNIRDIYFIGGFGTVAWVDVKEYETLQPDKIAVDGGEQYLK 301

Query: 123 -----------------------------------------KFNVQRISFEGGHAVETLE 154
                                                    +FN+QRISF+ G +VETLE
Sbjct: 302 ELNAIFSKPLKKLLSNETEVDDAALISIDSKGTDIRVRQGAQFNIQRISFDEGQSVETLE 361

The following BLAST results are available for this feature:
BLAST of Lsi02G028310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi02G028310 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A151RP72_CAJCA5.6e-7070.47Uncharacterized protein OS=Cajanus cajan GN=KK1_034145 PE=4 SV=1[more]
I1KGP9_SOYBN7.3e-7070.47Uncharacterized protein OS=Glycine max GN=GLYMA_07G020600 PE=4 SV=1[more]
A0A0B2P958_GLYSO7.3e-7070.47Uncharacterized protein OS=Glycine soja GN=glysoja_032699 PE=4 SV=1[more]
I1KGP8_SOYBN7.3e-7070.47Uncharacterized protein OS=Glycine max GN=GLYMA_07G020600 PE=4 SV=1[more]
A0A072UHJ3_MEDTR1.2e-6970.47Pyridoxamine 5'-phosphate oxidase family protein OS=Medicago truncatula GN=MTR_4... [more]
BLAST of Lsi02G028310 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G51560.17.7e-6360.10 Pyridoxamine 5'-phosphate oxidase family protein[more]
AT3G21140.12.2e-6260.42 Pyridoxamine 5'-phosphate oxidase family protein[more]
AT3G03890.17.1e-0827.83 FMN binding[more]
BLAST of Lsi02G028310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|470136070|ref|XP_004303824.1|1.6e-7070.98PREDICTED: uncharacterized protein LOC101291644 isoform X1 [Fragaria vesca subsp... [more]
gi|764610843|ref|XP_011467546.1|1.6e-7070.98PREDICTED: uncharacterized protein LOC101291644 isoform X2 [Fragaria vesca subsp... [more]
gi|1012332957|gb|KYP44368.1|8.0e-7070.47hypothetical protein KK1_034145 [Cajanus cajan][more]
gi|947098802|gb|KRH47294.1|1.0e-6970.47hypothetical protein GLYMA_07G020600 [Glycine max][more]
gi|356523095|ref|XP_003530177.1|1.0e-6970.47PREDICTED: uncharacterized protein LOC100785526 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0010181FMN binding
Vocabulary: INTERPRO
TermDefinition
IPR012349Split_barrel_FMN-bd
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0010181 FMN binding
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G028310.1Lsi02G028310.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012349FMN-binding split barrelGENE3DG3DSA:2.30.110.10coord: 2..104
score: 5.2
IPR012349FMN-binding split barrelunknownSSF50475FMN-binding split barrelcoord: 3..105
score: 1.03
NoneNo IPR availablePANTHERPTHR13343CREG1 PROTEINcoord: 3..163
score: 1.7
NoneNo IPR availablePANTHERPTHR13343:SF16SUBFAMILY NOT NAMEDcoord: 3..163
score: 1.7
NoneNo IPR availablePFAMPF13883Pyrid_oxidase_2coord: 3..105
score: 3.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi02G028310Cucumber (Gy14) v2cgyblsiB472
Lsi02G028310Melon (DHL92) v3.6.1lsimedB194
Lsi02G028310Silver-seed gourdcarlsiB546
Lsi02G028310Silver-seed gourdcarlsiB704
Lsi02G028310Cucumber (Chinese Long) v3cuclsiB538
Lsi02G028310Watermelon (97103) v2lsiwmbB213
Lsi02G028310Wax gourdlsiwgoB270
Lsi02G028310Cucumber (Gy14) v1cgylsiB577
Lsi02G028310Cucurbita maxima (Rimu)cmalsiB345
Lsi02G028310Cucurbita maxima (Rimu)cmalsiB826
Lsi02G028310Cucurbita moschata (Rifu)cmolsiB333
Lsi02G028310Cucurbita moschata (Rifu)cmolsiB813
Lsi02G028310Cucurbita pepo (Zucchini)cpelsiB110
Lsi02G028310Cucurbita pepo (Zucchini)cpelsiB257
Lsi02G028310Wild cucumber (PI 183967)cpilsiB517
Lsi02G028310Cucumber (Chinese Long) v2culsiB503
Lsi02G028310Melon (DHL92) v3.5.1lsimeB185
Lsi02G028310Watermelon (Charleston Gray)lsiwcgB160
Lsi02G028310Watermelon (97103) v1lsiwmB176