Lsi02G026920 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi02G026920
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionATP-dependent RNA helicase
Locationchr02 : 33329423 .. 33332370 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCTGCTGGTGGACGGTGTGACAGCCGGAACTTCGGAAGACCCCCAAAATTGCGTTGCTTGTTTACTACTCCGATTAGGGCGGCCGCCATTTTTCTCGACGGAGACCGTTCCGCCGATCAAGCTCGCTCTGTGTCTCGATAGTTTTCTTTGGTCTTGATTATCTGTGTCACTTTCTCCGTTTGGTTCTTGTTCGAATCCTGACAACGAAGAATAAGAGGATCGATCTGCTCCCTGTGTAAAAGGTTCGAGTAAGTTTTAGCTTATTTGCCTTTTGATAATCTTTGTGAGTTCTTATTATCGATTTATCTGTCAATGAAGCTATTTGTTCCATGTCTTTGTCTCTAAATCCGTCTCCGGGTGGTTCGAACTGAAAATGGGGTTGTATTTCGGAGACCCTAATCGGAATCTATCACTGAAGAATCTAATTCGAGAGGGTTGTTCTTGTTTGTAATTGGTTTCTGTATTTGGGTTTTGTTGTTTGGTTAATTGTAGTTGATATCTGTGTACAACATGAAATCTAATGGTTTCTAGGGTTAGCTTCGAAGTGTTTAGGGATTTAATTTCTGATGATCTGTTGTAATTTTTGGGTGCAGAGAGAGGATTCTTCGATGGATGTACAAATGAAGGACGAAAAGAGCTTGGAAGAAGGAGAAGATTATGTTGAATATGTTCCTGTGGCAAAACGTAGAGCAATGGAAGCTCAAAAGATTCTTATGCGTAAGGGTAAGGCTTCTGCCCTCGAGGAAGAGTTGGAGAAATCAAGACTTGCTGAAGCCAAGCCTAGTCTCCTTGTAAAAGCATCTCAGATGAAGCGTGACCAACCAGAAGTTAGTCCAACGGAGCAGATTGTTCAGCAAGAGAAGGAGATGATCGAGCACTTATCTGATCGTAAAACTCTAATGTCAGTTCGTGAACTAGCAAAAGGAATTACATACACAGAGCCATTATTAACTGGATGGAAGCCACCATTGCCGATCAGGAGGATGCCGAAAAAGGTGTGTGATTTGATTCGCAAACAGTGGCACATAATAGTTGATGGTGATGAGATTCCACCGCCTATTAAAAACTTCAAGGACATGAGACTCCCTGAACCAGTTTTGAAGAAATTGAAAGAAAAAGGAATTGTGCAACCTACTCCCATTCAGGTTCAAGGTCTACCTGTGATTTTATCTGGCAGAGATATGATCGGGATTGCATTTACGGGTTCAGGGAAGACCCTAGTTTTTGTTCTTCCTTTGATAATGATTGCATTACAAGAAGAGGTCATGATGCCCATTGTTTCAGGAGAAGGACCTTTTGGTTTGATTATTTGTCCTTCAAGGGAGCTTGCTAGACAGACCTATGAAGTGGTGGAACAGTTTTTAATTCCCATGAAGGAGGCTGGATATCCAGAAATAAGGCCTTTACTATGTATAGGTGGAGTGGATATGAGATCACAGATAGAGGTTGTGAAGAAGGGTGTTCATATTGTTGTTGCAACCCCTGGGAGGTTGAAGGATATGTTGGCAAAAAAGAAAATGAATCTTGACAATTGCAGGTAAAATAATTATTCCAGTTTGTATTCCATCTTTGGGTTAGACTATAGGAACAGAGAGTTGAAATGGACTAACATCTGGTTGCAATTAGCAAAGTAGTTTATTGATGATACTTATATATTTTGTGGAATTGTTATTTGTTTGGCAAAGAAATCCATGCTTGCTTGCCTCTCTATGAACTTTTTCCCTAGAGTTATTTTGTAGATAATTTGCTGTCAAACCTCGATTTGTTTCTGCTGATGCTGTCTTAACCTTCTGACTTTAGTTGTAGTTCTTCTCCTCTTTGCTCGGAATAATGAATACTAATTCTGCTATTGTTACAGGTATCTTACTTTAGATGAGGCTGATAGATTAGTGGATCTGGGATTCGAAGATGATATTAGGGAAGTTTTTGATCATTTTAAGGCTCAACGCCAAACTCTACTATTTTCTGCCACAATGCCTACCAAAATTCAAAATTTTGCAAGAAGTGCCCTGGTAAAGCCTGTGACTGTTAACGTGGGAAGAGCTGGAGCTGCAAACCTTGATGTCATCCAGGAGGTCGAGTATGTGAAACAAGAGGCAAAAATTGTTTACTTGCTCGAGTGCCTGCAGAAAACTCCACCTCCAGTGTTGATATTCTGTGAGAATAAAGCCGATGTCGATGACATTCACGAGTATCTACTCTTGAAAGGTGTTGAAGCAGTGGCAATTCATGGAGGAAAAGATCAGGAAGAGAGAGAGTATGCTATATCTTCCTTTAAGGCAAGCAAGAAAGATGTCTTGGTCGCTACTGATGTTGCATCAAAGGGTTTAGATTTTCCAGACATTCAACATGTTATCAACTACGATATGCCAGCTGAAATTGAGAACTACGTCCATAGGATTGGACGAACGGGACGATGTGGTAAGACAGGAATTGCAACAACATTCATAAATAAGAATCAAAGCGAAACAACTCTCCTTGATTTAAAGCACCTTCTGCAAGAAGCAAAACAGAGGATTCCACCAGTGTTGGCCGAGCTGAATGACCCTATGGAGGATGTGGAAGCGATCACCAATGCAAGTGGTGTTAAAGGTTGCGCTTATTGTGGTGGGCTTGGTCACCGTATTCGTGACTGCCCCAAGTTAGAGCACCAGAAAAGCATGGCAATTGCAAGTTCAAGAAGAGATTATTTTGGATCAGGCGGTTATAGAGGTGAAATTTGAGAAAGCTGAGAACAGAGTAAGGATTTTTTTGTTTGATTTCCCCTCTGCTCTACGCAGATTGTAACTGTATAAACTCATAAATTATCGTGGTTAGATATTCCAATGAAATCATGTAGTTTGTTATTTTGTCTGCGTTGACATTTGTGAGTCGACATTGATTTGATCTCAGTTACAAAAGGAAATCATTAATTGACATTATTGACACTGTCTTTACAAATTATGAA

mRNA sequence

GCCTGCTGGTGGACGGTGTGACAGCCGGAACTTCGGAAGACCCCCAAAATTGCGTTGCTTGTTTACTACTCCGATTAGGGCGGCCGCCATTTTTCTCGACGGAGACCGTTCCGCCGATCAAGCTCGCTCTGTGTCTCGATAGTTTTCTTTGGTCTTGATTATCTGTGTCACTTTCTCCGTTTGGTTCTTGTTCGAATCCTGACAACGAAGAATAAGAGGATCGATCTGCTCCCTGTGTAAAAGAGAGAGGATTCTTCGATGGATGTACAAATGAAGGACGAAAAGAGCTTGGAAGAAGGAGAAGATTATGTTGAATATGTTCCTGTGGCAAAACGTAGAGCAATGGAAGCTCAAAAGATTCTTATGCGTAAGGGTAAGGCTTCTGCCCTCGAGGAAGAGTTGGAGAAATCAAGACTTGCTGAAGCCAAGCCTAGTCTCCTTGTAAAAGCATCTCAGATGAAGCGTGACCAACCAGAAGTTAGTCCAACGGAGCAGATTGTTCAGCAAGAGAAGGAGATGATCGAGCACTTATCTGATCGTAAAACTCTAATGTCAGTTCGTGAACTAGCAAAAGGAATTACATACACAGAGCCATTATTAACTGGATGGAAGCCACCATTGCCGATCAGGAGGATGCCGAAAAAGGTGTGTGATTTGATTCGCAAACAGTGGCACATAATAGTTGATGGTGATGAGATTCCACCGCCTATTAAAAACTTCAAGGACATGAGACTCCCTGAACCAGTTTTGAAGAAATTGAAAGAAAAAGGAATTGTGCAACCTACTCCCATTCAGGTTCAAGGTCTACCTGTGATTTTATCTGGCAGAGATATGATCGGGATTGCATTTACGGGTTCAGGGAAGACCCTAGTTTTTGTTCTTCCTTTGATAATGATTGCATTACAAGAAGAGGTCATGATGCCCATTGTTTCAGGAGAAGGACCTTTTGGTTTGATTATTTGTCCTTCAAGGGAGCTTGCTAGACAGACCTATGAAGTGGTGGAACAGTTTTTAATTCCCATGAAGGAGGCTGGATATCCAGAAATAAGGCCTTTACTATGTATAGGTGGAGTGGATATGAGATCACAGATAGAGGTTGTGAAGAAGGGTGTTCATATTGTTGTTGCAACCCCTGGGAGGTTGAAGGATATGTTGGCAAAAAAGAAAATGAATCTTGACAATTGCAGGTATCTTACTTTAGATGAGGCTGATAGATTAGTGGATCTGGGATTCGAAGATGATATTAGGGAAGTTTTTGATCATTTTAAGGCTCAACGCCAAACTCTACTATTTTCTGCCACAATGCCTACCAAAATTCAAAATTTTGCAAGAAGTGCCCTGGTAAAGCCTGTGACTGTTAACGTGGGAAGAGCTGGAGCTGCAAACCTTGATGTCATCCAGGAGGTCGAGTATGTGAAACAAGAGGCAAAAATTGTTTACTTGCTCGAGTGCCTGCAGAAAACTCCACCTCCAGTGTTGATATTCTGTGAGAATAAAGCCGATGTCGATGACATTCACGAGTATCTACTCTTGAAAGGTGTTGAAGCAGTGGCAATTCATGGAGGAAAAGATCAGGAAGAGAGAGAGTATGCTATATCTTCCTTTAAGGCAAGCAAGAAAGATGTCTTGGTCGCTACTGATGTTGCATCAAAGGGTTTAGATTTTCCAGACATTCAACATGTTATCAACTACGATATGCCAGCTGAAATTGAGAACTACGTCCATAGGATTGGACGAACGGGACGATGTGGTAAGACAGGAATTGCAACAACATTCATAAATAAGAATCAAAGCGAAACAACTCTCCTTGATTTAAAGCACCTTCTGCAAGAAGCAAAACAGAGGATTCCACCAGTGTTGGCCGAGCTGAATGACCCTATGGAGGATGTGGAAGCGATCACCAATGCAAGTGGTGTTAAAGGTTGCGCTTATTGTGGTGGGCTTGGTCACCGTATTCGTGACTGCCCCAAGTTAGAGCACCAGAAAAGCATGGCAATTGCAAGTTCAAGAAGAGATTATTTTGGATCAGGCGGTTATAGAGGTGAAATTTGAGAAAGCTGAGAACAGAGTAAGGATTTTTTTGTTTGATTTCCCCTCTGCTCTACGCAGATTGTAACTGTATAAACTCATAAATTATCGTGGTTAGATATTCCAATGAAATCATGTAGTTTGTTATTTTGTCTGCGTTGACATTTGTGAGTCGACATTGATTTGATCTCAGTTACAAAAGGAAATCATTAATTGACATTATTGACACTGTCTTTACAAATTATGAA

Coding sequence (CDS)

ATGGATGTACAAATGAAGGACGAAAAGAGCTTGGAAGAAGGAGAAGATTATGTTGAATATGTTCCTGTGGCAAAACGTAGAGCAATGGAAGCTCAAAAGATTCTTATGCGTAAGGGTAAGGCTTCTGCCCTCGAGGAAGAGTTGGAGAAATCAAGACTTGCTGAAGCCAAGCCTAGTCTCCTTGTAAAAGCATCTCAGATGAAGCGTGACCAACCAGAAGTTAGTCCAACGGAGCAGATTGTTCAGCAAGAGAAGGAGATGATCGAGCACTTATCTGATCGTAAAACTCTAATGTCAGTTCGTGAACTAGCAAAAGGAATTACATACACAGAGCCATTATTAACTGGATGGAAGCCACCATTGCCGATCAGGAGGATGCCGAAAAAGGTGTGTGATTTGATTCGCAAACAGTGGCACATAATAGTTGATGGTGATGAGATTCCACCGCCTATTAAAAACTTCAAGGACATGAGACTCCCTGAACCAGTTTTGAAGAAATTGAAAGAAAAAGGAATTGTGCAACCTACTCCCATTCAGGTTCAAGGTCTACCTGTGATTTTATCTGGCAGAGATATGATCGGGATTGCATTTACGGGTTCAGGGAAGACCCTAGTTTTTGTTCTTCCTTTGATAATGATTGCATTACAAGAAGAGGTCATGATGCCCATTGTTTCAGGAGAAGGACCTTTTGGTTTGATTATTTGTCCTTCAAGGGAGCTTGCTAGACAGACCTATGAAGTGGTGGAACAGTTTTTAATTCCCATGAAGGAGGCTGGATATCCAGAAATAAGGCCTTTACTATGTATAGGTGGAGTGGATATGAGATCACAGATAGAGGTTGTGAAGAAGGGTGTTCATATTGTTGTTGCAACCCCTGGGAGGTTGAAGGATATGTTGGCAAAAAAGAAAATGAATCTTGACAATTGCAGGTATCTTACTTTAGATGAGGCTGATAGATTAGTGGATCTGGGATTCGAAGATGATATTAGGGAAGTTTTTGATCATTTTAAGGCTCAACGCCAAACTCTACTATTTTCTGCCACAATGCCTACCAAAATTCAAAATTTTGCAAGAAGTGCCCTGGTAAAGCCTGTGACTGTTAACGTGGGAAGAGCTGGAGCTGCAAACCTTGATGTCATCCAGGAGGTCGAGTATGTGAAACAAGAGGCAAAAATTGTTTACTTGCTCGAGTGCCTGCAGAAAACTCCACCTCCAGTGTTGATATTCTGTGAGAATAAAGCCGATGTCGATGACATTCACGAGTATCTACTCTTGAAAGGTGTTGAAGCAGTGGCAATTCATGGAGGAAAAGATCAGGAAGAGAGAGAGTATGCTATATCTTCCTTTAAGGCAAGCAAGAAAGATGTCTTGGTCGCTACTGATGTTGCATCAAAGGGTTTAGATTTTCCAGACATTCAACATGTTATCAACTACGATATGCCAGCTGAAATTGAGAACTACGTCCATAGGATTGGACGAACGGGACGATGTGGTAAGACAGGAATTGCAACAACATTCATAAATAAGAATCAAAGCGAAACAACTCTCCTTGATTTAAAGCACCTTCTGCAAGAAGCAAAACAGAGGATTCCACCAGTGTTGGCCGAGCTGAATGACCCTATGGAGGATGTGGAAGCGATCACCAATGCAAGTGGTGTTAAAGGTTGCGCTTATTGTGGTGGGCTTGGTCACCGTATTCGTGACTGCCCCAAGTTAGAGCACCAGAAAAGCATGGCAATTGCAAGTTCAAGAAGAGATTATTTTGGATCAGGCGGTTATAGAGGTGAAATTTGA

Protein sequence

MDVQMKDEKSLEEGEDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMPKKVCDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEVVEQFLIPMKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Homology
[Close]
BLAST of Lsi02G026920 vs. Swiss-Prot
Match: RH35_ARATH (DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana GN=RH35 PE=2 SV=1)

HSP 1 Score: 1034.6 bits (2674), Expect = 4.1e-301
Identity = 519/590 (87.97%), Postives = 555/590 (94.07%), Query Frame = 1 

Query: 8   EKSLEEGEDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQM 67
           E  +EE + Y+EYV VA+RRA+ AQKIL RKGKAS LEEE +K +LAEAKPSLLV+A+Q+
Sbjct: 2   ESIMEEADSYIEYVSVAERRAIAAQKILQRKGKASELEEEADKEKLAEAKPSLLVQATQL 61

Query: 68  KRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMP 127
           KRD PEVS TEQI+ QEKEM+EHLSD+KTLMSVRELAKGITYTEPLLTGWKPPL IR+M 
Sbjct: 62  KRDVPEVSATEQIILQEKEMMEHLSDKKTLMSVRELAKGITYTEPLLTGWKPPLHIRKMS 121

Query: 128 KKVCDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVIL 187
            K  DLIRKQWHIIV+GD+IPPPIKNFKDM+ P PVL  LKEKGIVQPTPIQVQGLPVIL
Sbjct: 122 SKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVIL 181

Query: 188 SGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEV 247
           +GRDMIGIAFTGSGKTLVFVLP+IMIALQEE+MMPI +GEGP GLI+CPSRELARQTYEV
Sbjct: 182 AGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEV 241

Query: 248 VEQFLIPMKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLD 307
           VEQF+ P+ EAGYP +R LLCIGG+DMRSQ+EVVK+GVHIVVATPGRLKDMLAKKKM+LD
Sbjct: 242 VEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLD 301

Query: 308 NCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTV 367
            CRYLTLDEADRLVDLGFEDDIREVFDHFK+QRQTLLFSATMPTKIQ FARSALVKPVTV
Sbjct: 302 ACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTV 361

Query: 368 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG 427
           NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKT PPVLIFCENKADVDDIHEYLLLKG
Sbjct: 362 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKG 421

Query: 428 VEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 487
           VEAVAIHGGKDQE+REYAISSFKA KKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY
Sbjct: 422 VEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 481

Query: 488 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAI 547
           VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPME+ E I
Sbjct: 482 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEEAETI 541

Query: 548 TNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598
            NASGVKGCAYCGGLGHRIRDCPKLEHQKS+AI++SR+DYFGSGGYRGEI
Sbjct: 542 ANASGVKGCAYCGGLGHRIRDCPKLEHQKSVAISNSRKDYFGSGGYRGEI 591

[Close]
BLAST of Lsi02G026920 vs. Swiss-Prot
Match: RH35A_ORYSJ (DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa subsp. japonica GN=Os02g0150100 PE=2 SV=2)

HSP 1 Score: 969.9 bits (2506), Expect = 1.2e-281
Identity = 483/610 (79.18%), Postives = 540/610 (88.52%), Query Frame = 1 

Query: 12  EEGEDYVEYVPVAKRRAMEAQKILMRK--------GKASALEEELEK------------- 71
           ++ ++Y EY+PVAKRRAMEA ++   +          A+    +L               
Sbjct: 18  DDEDNYEEYIPVAKRRAMEADRLRRLRLSKPAPPSSSAAEAASDLPPPPPPPPNQPSAGG 77

Query: 72  ---SRLAEAKPSLLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGI 131
                 A AKPSLLVKA+Q+KR  PEV+ TEQ++ QEKEMIEHLSDRKTLMSVRELAKGI
Sbjct: 78  GGGGLEASAKPSLLVKATQLKRAAPEVTHTEQLIMQEKEMIEHLSDRKTLMSVRELAKGI 137

Query: 132 TYTEPLLTGWKPPLPIRRMPKKVCDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKL 191
           TY++PL TGWKPPL +RRMP+   D +R++WHI+VDGD++PPP ++F+D+RLPEP+L+KL
Sbjct: 138 TYSDPLKTGWKPPLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKL 197

Query: 192 KEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGE 251
           +EKGIVQPTPIQVQGLPV+LSGRDMIGIAFTGSGKTLVFVLPLIM+ALQEE+MMPIV GE
Sbjct: 198 REKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGE 257

Query: 252 GPFGLIICPSRELARQTYEVVEQFLIPMKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHI 311
           GPFG+IICPSRELA+QTY+V+EQFL+P+KEAGYPEIRPLLCIGGVDMR+Q++VVKKGVHI
Sbjct: 258 GPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGVHI 317

Query: 312 VVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSA 371
           VVATPGRLKD+LAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSA
Sbjct: 318 VVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSA 377

Query: 372 TMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVL 431
           TMP KIQNFA+SALVKPV VNVGRAGAANLDVIQEVEYVK++A+I+YLLECLQKTPPPVL
Sbjct: 378 TMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQEVEYVKEDARIIYLLECLQKTPPPVL 437

Query: 432 IFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGL 491
           +FCENKADVD IHEYLLLKGVEAVAIHGGKDQEERE AI  FK  KKDVLVATDVASKGL
Sbjct: 438 VFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVASKGL 497

Query: 492 DFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAK 551
           DFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQ+ETTLLDLKHLL+EAK
Sbjct: 498 DFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHLLKEAK 557

Query: 552 QRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDY 598
           QRIPPVLAELNDP+ED E +   SGVKGCAYCGGLGHR+ DCPKLEHQKSMAIA SRRDY
Sbjct: 558 QRIPPVLAELNDPLEDEETMAKESGVKGCAYCGGLGHRVTDCPKLEHQKSMAIAGSRRDY 617

[Close]
BLAST of Lsi02G026920 vs. Swiss-Prot
Match: RH35B_ORYSJ (DEAD-box ATP-dependent RNA helicase 35B OS=Oryza sativa subsp. japonica GN=Os06g0697200 PE=3 SV=1)

HSP 1 Score: 896.7 bits (2316), Expect = 1.3e-259
Identity = 453/597 (75.88%), Postives = 518/597 (86.77%), Query Frame = 1 

Query: 15  EDYVEYVPVAKRRAMEAQKILMRKGK-------ASALEEELEKSRLAEA------KPSLL 74
           EDY EYVPVAKRRAMEA++ L R  K       A A      +S  + A      K SLL
Sbjct: 24  EDYEEYVPVAKRRAMEAER-LRRATKPPTTNAVAVAAPPPPPRSTSSPAVGEVAVKTSLL 83

Query: 75  VKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPL 134
           VKA+++KR+ PEV+P E+++QQE+EMIEHLSDRK LM V E+AKGI+Y+EP+ TGW+PPL
Sbjct: 84  VKATKLKREAPEVTPAERLLQQEREMIEHLSDRKALMPVGEIAKGISYSEPITTGWRPPL 143

Query: 135 PIRRMPKKVCDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQ 194
            +RRMP+   D +R+ WHI+VDGD++PPP ++F D+RLPEP+L+ L+ KGI +PTPIQVQ
Sbjct: 144 RLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQVQ 203

Query: 195 GLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELA 254
           GLPV LSGRDMIGIAFTGSGKTLVFVLPLIM ALQEE++MPIV GEGPFGLI+CPSRELA
Sbjct: 204 GLPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGEGPFGLIVCPSRELA 263

Query: 255 RQTYEVVEQFLIPMKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAK 314
           RQT+EV+E FL P+ EAGYPEIRPLLCIGGVDMR+Q+EVVKKGVHIVVATPGRLKD+L+K
Sbjct: 264 RQTHEVIEMFLAPLMEAGYPEIRPLLCIGGVDMRTQMEVVKKGVHIVVATPGRLKDLLSK 323

Query: 315 KKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSAL 374
           KKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP KIQNFA+SAL
Sbjct: 324 KKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSAL 383

Query: 375 VKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHE 434
           VKP+ VNVGRAGAANLDVIQEVEYVK+EA+I+YLLECLQKTPPPVL+FCE+KADVD I E
Sbjct: 384 VKPIIVNVGRAGAANLDVIQEVEYVKEEARIIYLLECLQKTPPPVLVFCEHKADVDYIQE 443

Query: 435 YLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMP 494
           +LLLKGVEAVAIHGGKD EER+ A  SFKAS+KDVLVATDVASKGLD PDIQHVINYDMP
Sbjct: 444 FLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMP 503

Query: 495 AEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPM 554
           AEIENYVHRIGRTGR GKTG+ATTFINKNQ+ETTLLDLK LL E+KQR+PP+LA+L+DP 
Sbjct: 504 AEIENYVHRIGRTGRRGKTGVATTFINKNQTETTLLDLKQLLIESKQRLPPILADLDDPQ 563

Query: 555 EDVE-AITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598
           ED + AI   SGVKGCA+CGGLGHRI  CPK + Q S+ +A +R DYFG GGYRGEI
Sbjct: 564 EDDKVAIAQQSGVKGCAFCGGLGHRIEACPKQQLQNSVTLARARSDYFGGGGYRGEI 619

[Close]
BLAST of Lsi02G026920 vs. Swiss-Prot
Match: RH43_ARATH (Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis thaliana GN=RH43 PE=3 SV=1)

HSP 1 Score: 876.3 bits (2263), Expect = 1.9e-253
Identity = 436/535 (81.50%), Postives = 477/535 (89.16%), Query Frame = 1 

Query: 63  KASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLP 122
           + +QMKR   E        +  K M+EHLSD+K LMSV ELA+GITYTEPL T WKPPL 
Sbjct: 16  RLAQMKRKVVE--------EPGKGMMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLH 75

Query: 123 IRRMPKKVCDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQG 182
           +R+M  K  DLIRKQWHI V+G++IPPPIKNF DM+ P P+L+ LK+KGI+ PTPIQVQG
Sbjct: 76  VRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQG 135

Query: 183 LPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELAR 242
           LPV+LSGRDMIGIAFTGSGKTLVFVLP+I++ALQEE+MMPI +GEGP  L+ICPSRELA+
Sbjct: 136 LPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAK 195

Query: 243 QTYEVVEQFLIPMKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKK 302
           QTY+VVEQF+  + E GYP +R LLCIGGVDMRSQ++VVKKGVHIVVATPGRLKD+LAKK
Sbjct: 196 QTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKK 255

Query: 303 KMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALV 362
           KM+LD CR LTLDEADRLVDLGFEDDIR VFDHFK+QRQTLLFSATMP KIQ FA SALV
Sbjct: 256 KMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALV 315

Query: 363 KPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEY 422
           KPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKT PPVLIFCENKADVDDIHEY
Sbjct: 316 KPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEY 375

Query: 423 LLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPA 482
           LLLKGVEAVAIHGGKDQE+R+YAIS FKA KKDVLVATDVASKGLDFPDIQHVINYDMP 
Sbjct: 376 LLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPG 435

Query: 483 EIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPME 542
           EIENYVHRIGRTGRCGKTGIATTFINKNQSE TLLDLKHLLQEAKQRIPPVLAELN PME
Sbjct: 436 EIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPME 495

Query: 543 DVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598
           + E I NASGVKGCAYCGGLGHRI  CPK EHQKS+AI+SSR+D+FGS GYRGE+
Sbjct: 496 ETETIANASGVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGEV 542

[Close]
BLAST of Lsi02G026920 vs. Swiss-Prot
Match: DDX41_MOUSE (Probable ATP-dependent RNA helicase DDX41 OS=Mus musculus GN=Ddx41 PE=1 SV=2)

HSP 1 Score: 693.7 bits (1789), Expect = 1.7e-198
Identity = 355/596 (59.56%), Postives = 456/596 (76.51%), Query Frame = 1 

Query: 6   KDEKSLEEGEDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLA----------- 65
           + E   E+ EDYV YVP+ +RR +  QK+L R+ K +  EE+ +                
Sbjct: 22  RSEDEDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGATEEEQQDSGSEPRGDEDDIPLGP 81

Query: 66  EAKPSLLVKASQMKR--DQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEP 125
           ++  SLL +   +K   +  + S  E+ +++E++++E +++ + LMSV+E+AKGITY +P
Sbjct: 82  QSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDP 141

Query: 126 LLTGWKPPLPIRRMPKKVCDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGI 185
           + T W PP  +  M ++  + +RK++HI+V+GD IPPPIK+FK+M+ P  +L+ LK+KGI
Sbjct: 142 IKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGI 201

Query: 186 VQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGL 245
           + PTPIQ+QG+P ILSGRDMIGIAFTGSGKTLVF LP+IM  L++E  +P    EGP+GL
Sbjct: 202 LHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGL 261

Query: 246 IICPSRELARQTYEVVEQFLIPMKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATP 305
           IICPSRELARQT+ ++E +   ++E   P +R  LCIGG+ ++ Q+E ++ GVH++VATP
Sbjct: 262 IICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATP 321

Query: 306 GRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTK 365
           GRL D+L KK ++LD CRYL LDEADR++D+GFE DIR +F +FK QRQTLLFSATMP K
Sbjct: 322 GRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKK 381

Query: 366 IQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCEN 425
           IQNFA+SALVKPVT+NVGRAGAA+LDVIQEVEYVK+EAK+VYLLECLQKTPPPVLIF E 
Sbjct: 382 IQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEK 441

Query: 426 KADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDI 485
           KADVD IHEYLLLKGVEAVAIHGGKDQEER  AI +F+  KKDVLVATDVASKGLDFP I
Sbjct: 442 KADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAI 501

Query: 486 QHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPP 545
           QHVINYDMP EIENYVHRIGRTGR G TGIATTFINK   E+ L+DLK LL EAKQ++PP
Sbjct: 502 QHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPP 561

Query: 546 VLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIAS-SRRDY 588
           VL  L+      E++ +  G +GCA+CGGLGHRI DCPKLE  ++  +++  R+DY
Sbjct: 562 VLQVLHC---GDESMLDIGGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDY 614

[Close]
BLAST of Lsi02G026920 vs. TrEMBL
Match: A0A0A0K6A2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432260 PE=4 SV=1)

HSP 1 Score: 1163.7 bits (3009), Expect = 0.0e+00
Identity = 592/597 (99.16%), Postives = 595/597 (99.66%), Query Frame = 1 

Query: 1   MDVQMKDEKSLEEGEDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL 60
           MDVQMKDEKSLEE ++YVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL
Sbjct: 121 MDVQMKDEKSLEEEDEYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL 180

Query: 61  LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP 120
           LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP
Sbjct: 181 LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP 240

Query: 121 LPIRRMPKKVCDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV 180
           LPIRRMPKK CDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV
Sbjct: 241 LPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV 300

Query: 181 QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL 240
           QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL
Sbjct: 301 QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL 360

Query: 241 ARQTYEVVEQFLIPMKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA 300
           ARQTYEVVEQFLIPMKEAGYPE+RPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA
Sbjct: 361 ARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA 420

Query: 301 KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA 360
           KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA
Sbjct: 421 KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA 480

Query: 361 LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH 420
           LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH
Sbjct: 481 LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH 540

Query: 421 EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM 480
           EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM
Sbjct: 541 EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM 600

Query: 481 PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP 540
           PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP
Sbjct: 601 PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP 660

Query: 541 MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598
           MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 661 MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 717

[Close]
BLAST of Lsi02G026920 vs. TrEMBL
Match: A0A067E841_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g007831mg PE=4 SV=1)

HSP 1 Score: 1097.4 bits (2837), Expect = 0.0e+00
Identity = 547/587 (93.19%), Postives = 573/587 (97.61%), Query Frame = 1 

Query: 11  LEEGEDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQMKRD 70
           +EE +DYVEYVP+AKRRAMEAQKIL RKG+AS LE+ELEKS+LAE KPSLLVKASQ+KRD
Sbjct: 2   MEEEDDYVEYVPIAKRRAMEAQKILQRKGQASTLEDELEKSKLAEVKPSLLVKASQLKRD 61

Query: 71  QPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMPKKV 130
           QPE+SPTEQIVQQEKEMIE+LSDRKTLMSVRELAKGITYT+PLLTGWKPPLPIRRM KK 
Sbjct: 62  QPEISPTEQIVQQEKEMIENLSDRKTLMSVRELAKGITYTDPLLTGWKPPLPIRRMSKKA 121

Query: 131 CDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGR 190
           CDLIRKQWHIIVDG++IPPPIKNFKDMR PEP+LKKLK KGIVQPTPIQVQGLPV+LSGR
Sbjct: 122 CDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGR 181

Query: 191 DMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEVVEQ 250
           DMIGIAFTGSGKTLVFVLP+IMIA+ EE+MMPIV GEGPF LI+CPSRELARQTYEVVEQ
Sbjct: 182 DMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYEVVEQ 241

Query: 251 FLIPMKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCR 310
           FL PM++AGYP++R LLCIGGVDMRSQ+EVVK+GVHIVVATPGRLKDMLAKKKMNLDNCR
Sbjct: 242 FLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCR 301

Query: 311 YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG 370
           YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG
Sbjct: 302 YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG 361

Query: 371 RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA 430
           RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA
Sbjct: 362 RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA 421

Query: 431 VAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR 490
           VA+HGGKDQEEREYAISSFKA KKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR
Sbjct: 422 VAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR 481

Query: 491 IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAITNA 550
           IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDV+AITNA
Sbjct: 482 IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAITNA 541

Query: 551 SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598
           SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 542 SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 588

[Close]
BLAST of Lsi02G026920 vs. TrEMBL
Match: V4UMQ8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025231mg PE=4 SV=1)

HSP 1 Score: 1096.3 bits (2834), Expect = 0.0e+00
Identity = 546/587 (93.02%), Postives = 573/587 (97.61%), Query Frame = 1 

Query: 11  LEEGEDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQMKRD 70
           +EE +DYVEYVP+AKRRAMEAQKIL RKG+AS LE+ELEKS+LAE KPSLLVKASQ+KRD
Sbjct: 2   MEEEDDYVEYVPIAKRRAMEAQKILQRKGQASTLEDELEKSKLAEVKPSLLVKASQLKRD 61

Query: 71  QPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMPKKV 130
           QPE+SPTEQIVQQEKEMIE+LSDRKTLMSVRELAKGITYT+PLLTGWKPPLPIRRM KK 
Sbjct: 62  QPEISPTEQIVQQEKEMIENLSDRKTLMSVRELAKGITYTDPLLTGWKPPLPIRRMSKKA 121

Query: 131 CDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGR 190
           CDLIRKQWHIIVDG++IPPPIKNFKDMR PEP+LKKLK KGIVQPTPIQVQGLPV+LSGR
Sbjct: 122 CDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGR 181

Query: 191 DMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEVVEQ 250
           DMIGIAFTGSGKTLVFVLP+IMIA+ EE+MMPIV GEGPF LI+CPSRELARQTYEVVEQ
Sbjct: 182 DMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYEVVEQ 241

Query: 251 FLIPMKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCR 310
           FL PM++AGYP++R LLCIGGVDMRSQ+EVVK+GVHIVVATPGRLKDMLAKKKMNLDNCR
Sbjct: 242 FLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCR 301

Query: 311 YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG 370
           YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG
Sbjct: 302 YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG 361

Query: 371 RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA 430
           RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA
Sbjct: 362 RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA 421

Query: 431 VAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR 490
           VA+HGGKDQEEREYAISSFKA KKD+LVATDVASKGLDFPDIQHVINYDMPAEIENYVHR
Sbjct: 422 VAVHGGKDQEEREYAISSFKAGKKDLLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR 481

Query: 491 IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAITNA 550
           IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDV+AITNA
Sbjct: 482 IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAITNA 541

Query: 551 SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598
           SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 542 SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 588

[Close]
BLAST of Lsi02G026920 vs. TrEMBL
Match: A5B7F0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g08120 PE=4 SV=1)

HSP 1 Score: 1095.1 bits (2831), Expect = 0.0e+00
Identity = 547/587 (93.19%), Postives = 570/587 (97.10%), Query Frame = 1 

Query: 11  LEEGEDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQMKRD 70
           +EE +DYVEY+PV KRRAMEAQ+IL RKGK+SALE+E EKS+LAEAKPSLLVKASQ+KRD
Sbjct: 1   MEEDDDYVEYIPVKKRRAMEAQRILQRKGKSSALEDEAEKSKLAEAKPSLLVKASQLKRD 60

Query: 71  QPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMPKKV 130
            PE+SP EQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRM +K 
Sbjct: 61  LPEISPAEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMSRKE 120

Query: 131 CDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGR 190
           C+ IRKQWHIIVDGDEIPPPIKNFKDMR PEP+LK LK KGIVQPTPIQVQGLPVILSGR
Sbjct: 121 CESIRKQWHIIVDGDEIPPPIKNFKDMRFPEPILKNLKAKGIVQPTPIQVQGLPVILSGR 180

Query: 191 DMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEVVEQ 250
           DMIGIAFTGSGKTLVFVLPLIM+ALQEEV MPIV GEGPFGL+ICPSRELARQTYEVVEQ
Sbjct: 181 DMIGIAFTGSGKTLVFVLPLIMVALQEEVSMPIVPGEGPFGLVICPSRELARQTYEVVEQ 240

Query: 251 FLIPMKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCR 310
           FL+PM+E GYPE+RPLLCIGGVDMRSQ+EVVKKGVHI+VATPGRLKDMLAKKK+NLDNCR
Sbjct: 241 FLVPMRECGYPELRPLLCIGGVDMRSQLEVVKKGVHIIVATPGRLKDMLAKKKLNLDNCR 300

Query: 311 YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG 370
           YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG
Sbjct: 301 YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG 360

Query: 371 RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA 430
           RAGAANLDVIQEVEYVKQEAKIVYLLECLQKT PPVLIFCENKADVDDIHEYLLLKGVEA
Sbjct: 361 RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVEA 420

Query: 431 VAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR 490
           VAIHGGKDQEEREYAISSFKA KKDVLVATDVASKGLDFPDI+HVINYDMPAEIENYVHR
Sbjct: 421 VAIHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIKHVINYDMPAEIENYVHR 480

Query: 491 IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAITNA 550
           IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDV+AIT+A
Sbjct: 481 IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAITDA 540

Query: 551 SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598
           SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 541 SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 587

[Close]
BLAST of Lsi02G026920 vs. TrEMBL
Match: A0A0D2UL31_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G126600 PE=4 SV=1)

HSP 1 Score: 1086.2 bits (2808), Expect = 0.0e+00
Identity = 544/587 (92.67%), Postives = 571/587 (97.27%), Query Frame = 1 

Query: 11  LEEGEDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQMKRD 70
           +EE +DYVEY+PVAKRRAMEAQKIL RKGKASALE+E EK+ +AE KPSLL+KA+Q+K+D
Sbjct: 1   MEEDDDYVEYIPVAKRRAMEAQKILQRKGKASALEDETEKANVAEVKPSLLIKATQLKKD 60

Query: 71  QPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMPKKV 130
           QPE+S  EQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPL IRRM +K 
Sbjct: 61  QPEISQMEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLHIRRMSRKD 120

Query: 131 CDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGR 190
            DLIRKQWHIIVDGDEIPPPIKNFKDM+ P+P+LKKLK KGIVQPTPIQVQGLPVILSGR
Sbjct: 121 RDLIRKQWHIIVDGDEIPPPIKNFKDMKFPDPILKKLKAKGIVQPTPIQVQGLPVILSGR 180

Query: 191 DMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEVVEQ 250
           DMIGIAFTGSGKTLVFVLPLIMIALQEE+MMPI+ GEGPFGLI+CPSRELARQTYEVVEQ
Sbjct: 181 DMIGIAFTGSGKTLVFVLPLIMIALQEEMMMPILPGEGPFGLIVCPSRELARQTYEVVEQ 240

Query: 251 FLIPMKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCR 310
           FLIPM+E GYPE+RPLLCIGGVDMRSQ++VVKKGVHIVVATPGRLKDMLAKKKM+LDNCR
Sbjct: 241 FLIPMRENGYPELRPLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDMLAKKKMSLDNCR 300

Query: 311 YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG 370
           YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG
Sbjct: 301 YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG 360

Query: 371 RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA 430
           RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA
Sbjct: 361 RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA 420

Query: 431 VAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR 490
           VAIHGGKDQEERE+AISSFKA KKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR
Sbjct: 421 VAIHGGKDQEEREHAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR 480

Query: 491 IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAITNA 550
           IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL+DPMEDV+AITNA
Sbjct: 481 IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELSDPMEDVDAITNA 540

Query: 551 SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598
           SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIA+SRRDYFGSGGYRGEI
Sbjct: 541 SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIANSRRDYFGSGGYRGEI 587

[Close]
BLAST of Lsi02G026920 vs. TAIR10
Match: AT5G51280.1 (AT5G51280.1 DEAD-box protein abstrakt, putative)

HSP 1 Score: 1034.6 bits (2674), Expect = 2.3e-302
Identity = 519/590 (87.97%), Postives = 555/590 (94.07%), Query Frame = 1 

Query: 8   EKSLEEGEDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQM 67
           E  +EE + Y+EYV VA+RRA+ AQKIL RKGKAS LEEE +K +LAEAKPSLLV+A+Q+
Sbjct: 2   ESIMEEADSYIEYVSVAERRAIAAQKILQRKGKASELEEEADKEKLAEAKPSLLVQATQL 61

Query: 68  KRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMP 127
           KRD PEVS TEQI+ QEKEM+EHLSD+KTLMSVRELAKGITYTEPLLTGWKPPL IR+M 
Sbjct: 62  KRDVPEVSATEQIILQEKEMMEHLSDKKTLMSVRELAKGITYTEPLLTGWKPPLHIRKMS 121

Query: 128 KKVCDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVIL 187
            K  DLIRKQWHIIV+GD+IPPPIKNFKDM+ P PVL  LKEKGIVQPTPIQVQGLPVIL
Sbjct: 122 SKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVIL 181

Query: 188 SGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEV 247
           +GRDMIGIAFTGSGKTLVFVLP+IMIALQEE+MMPI +GEGP GLI+CPSRELARQTYEV
Sbjct: 182 AGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEV 241

Query: 248 VEQFLIPMKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLD 307
           VEQF+ P+ EAGYP +R LLCIGG+DMRSQ+EVVK+GVHIVVATPGRLKDMLAKKKM+LD
Sbjct: 242 VEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLD 301

Query: 308 NCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTV 367
            CRYLTLDEADRLVDLGFEDDIREVFDHFK+QRQTLLFSATMPTKIQ FARSALVKPVTV
Sbjct: 302 ACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTV 361

Query: 368 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG 427
           NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKT PPVLIFCENKADVDDIHEYLLLKG
Sbjct: 362 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKG 421

Query: 428 VEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 487
           VEAVAIHGGKDQE+REYAISSFKA KKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY
Sbjct: 422 VEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 481

Query: 488 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAI 547
           VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPME+ E I
Sbjct: 482 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEEAETI 541

Query: 548 TNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598
            NASGVKGCAYCGGLGHRIRDCPKLEHQKS+AI++SR+DYFGSGGYRGEI
Sbjct: 542 ANASGVKGCAYCGGLGHRIRDCPKLEHQKSVAISNSRKDYFGSGGYRGEI 591

[Close]
BLAST of Lsi02G026920 vs. TAIR10
Match: AT4G33370.1 (AT4G33370.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 876.3 bits (2263), Expect = 1.1e-254
Identity = 436/535 (81.50%), Postives = 477/535 (89.16%), Query Frame = 1 

Query: 63  KASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLP 122
           + +QMKR   E        +  K M+EHLSD+K LMSV ELA+GITYTEPL T WKPPL 
Sbjct: 16  RLAQMKRKVVE--------EPGKGMMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLH 75

Query: 123 IRRMPKKVCDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQG 182
           +R+M  K  DLIRKQWHI V+G++IPPPIKNF DM+ P P+L+ LK+KGI+ PTPIQVQG
Sbjct: 76  VRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQG 135

Query: 183 LPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELAR 242
           LPV+LSGRDMIGIAFTGSGKTLVFVLP+I++ALQEE+MMPI +GEGP  L+ICPSRELA+
Sbjct: 136 LPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAK 195

Query: 243 QTYEVVEQFLIPMKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKK 302
           QTY+VVEQF+  + E GYP +R LLCIGGVDMRSQ++VVKKGVHIVVATPGRLKD+LAKK
Sbjct: 196 QTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKK 255

Query: 303 KMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALV 362
           KM+LD CR LTLDEADRLVDLGFEDDIR VFDHFK+QRQTLLFSATMP KIQ FA SALV
Sbjct: 256 KMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALV 315

Query: 363 KPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEY 422
           KPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKT PPVLIFCENKADVDDIHEY
Sbjct: 316 KPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEY 375

Query: 423 LLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPA 482
           LLLKGVEAVAIHGGKDQE+R+YAIS FKA KKDVLVATDVASKGLDFPDIQHVINYDMP 
Sbjct: 376 LLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPG 435

Query: 483 EIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPME 542
           EIENYVHRIGRTGRCGKTGIATTFINKNQSE TLLDLKHLLQEAKQRIPPVLAELN PME
Sbjct: 436 EIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPME 495

Query: 543 DVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598
           + E I NASGVKGCAYCGGLGHRI  CPK EHQKS+AI+SSR+D+FGS GYRGE+
Sbjct: 496 ETETIANASGVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGEV 542

[Close]
BLAST of Lsi02G026920 vs. TAIR10
Match: AT1G55150.1 (AT1G55150.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 303.1 bits (775), Expect = 3.7e-82
Identity = 163/406 (40.15%), Postives = 246/406 (60.59%), Query Frame = 1 

Query: 135 RKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGRDMIG 194
           RK   I V+G +IP P+K+F+D+  P+ VL+++K+ G  +PTPIQ QG P+ + GRD+IG
Sbjct: 82  RKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIG 141

Query: 195 IAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEVVEQFLIP 254
           IA TGSGKTL ++LP I+    + ++     G+GP  L++ P+RELA Q  +   +F   
Sbjct: 142 IAETGSGKTLSYLLPAIVHVNAQPML---AHGDGPIVLVLAPTRELAVQIQQEASKF--- 201

Query: 255 MKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTL 314
                  +I+     GGV    Q+  ++KGV IV+ATPGRL DM+     NL    YL L
Sbjct: 202 ---GSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVL 261

Query: 315 DEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGA 374
           DEADR++D+GF+  IR++  H +  RQTL +SAT P +++  ++  L  P  V +G +  
Sbjct: 262 DEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDL 321

Query: 375 -ANLDVIQEVEYVKQEAKIVYLLECLQKTPPP--VLIFCENKADVDDIHEYLLLKGVEAV 434
            AN  + Q V+ + +  K   L++ L+       +L+F + K   D I   L + G  A+
Sbjct: 322 KANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPAL 381

Query: 435 AIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRI 494
           +IHG K Q ER++ +S F++ K  ++ ATDVA++GLD  D+++VINYD P  +E+YVHRI
Sbjct: 382 SIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRI 441

Query: 495 GRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 538
           GRTGR G  G A TF     +     +L ++LQEA Q++ P LA +
Sbjct: 442 GRTGRAGAKGTAYTFFTVANARFA-KELTNILQEAGQKVSPELASM 477

[Close]
BLAST of Lsi02G026920 vs. TAIR10
Match: AT2G47330.1 (AT2G47330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 293.9 bits (751), Expect = 2.2e-79
Identity = 173/425 (40.71%), Postives = 245/425 (57.65%), Query Frame = 1 

Query: 135 RKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGRDMIG 194
           R++  I V G ++  P+K F+D      ++  +K++   +PT IQ Q LP++LSGRD+IG
Sbjct: 211 RQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIG 270

Query: 195 IAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEVVEQFLIP 254
           IA TGSGKT  FVLP+I+  + +  +      EGP G+I  P+RELA Q +   ++F   
Sbjct: 271 IAKTGSGKTAAFVLPMIVHIMDQPELQ---RDEGPIGVICAPTRELAHQIFLEAKKF--- 330

Query: 255 MKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTL 314
            K  G   +R     GG+    Q + +K G  IVVATPGRL DML  K + +    YL L
Sbjct: 331 SKAYG---LRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVL 390

Query: 315 DEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGA 374
           DEADR+ DLGFE  +R +    +  RQTLLFSATMP K++  AR  L  P+ V VG  G 
Sbjct: 391 DEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGM 450

Query: 375 ANLDVIQEVEYVKQEA-KIVYLLECL--QKTPPPVLIFCENKADVDDIHEYLLLKGVEAV 434
           AN D+ Q V  +  +A K+ +LLE L        VL+F   KA VD+I   L L   +  
Sbjct: 451 ANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVA 510

Query: 435 AIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRI 494
           A+HG KDQ  R   +  FK+    VL+ATDVA++GLD   ++ V+NYD+  +++ +VHRI
Sbjct: 511 ALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRI 570

Query: 495 GRTGRCG-KTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAITNA 554
           GRTGR G + G+A T + + ++     +L + L  A Q +PP L +L   M+D    +  
Sbjct: 571 GRTGRAGDRDGVAYTLVTQREARFA-GELVNSLVAAGQNVPPELTDL--AMKDGRFKSKR 623

Query: 555 SGVKG 556
            G KG
Sbjct: 631 DGRKG 623

[Close]
BLAST of Lsi02G026920 vs. TAIR10
Match: AT5G63120.2 (AT5G63120.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 293.5 bits (750), Expect = 2.9e-79
Identity = 169/419 (40.33%), Postives = 247/419 (58.95%), Query Frame = 1 

Query: 123 IRRMPKKVCDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQG 182
           ++ M ++   + R +  I V+G ++P P+K F+D   P+ +L+ + + G  +PTPIQ QG
Sbjct: 136 VQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQG 195

Query: 183 LPVILSGRDMIGIAFTGSGKTLVFVLP-LIMIALQEEVMMPIVSGEGPFGLIICPSRELA 242
            P+ L GRD+IGIA TGSGKTL ++LP L+ ++ Q      +   +GP  LI+ P+RELA
Sbjct: 196 WPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPR----LGQDDGPIVLILAPTRELA 255

Query: 243 RQTYEVVEQFLIPMKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAK 302
            Q  E   +F +    +G   +R     GG     QI  +++GV IV+ATPGRL DML  
Sbjct: 256 VQIQEESRKFGL---RSG---VRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEC 315

Query: 303 KKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSAL 362
           +  NL    YL LDEADR++D+GFE  IR++    +  RQTLL+SAT P +++  AR  L
Sbjct: 316 QHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFL 375

Query: 363 VKPVTVNVGRAGA-ANLDVIQEVEYVKQEAKIVYLLECLQKTPP--PVLIFCENKADVDD 422
             P    +G     AN  + Q +E V    K   LL  L++      +LIF E K   D 
Sbjct: 376 RDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQ 435

Query: 423 IHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINY 482
           +   L + G  A+AIHG K Q ER+  ++ FK+ +  ++ ATDVA++GLD  DI+ V+NY
Sbjct: 436 VTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNY 495

Query: 483 DMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 538
           D P  +E+Y+HRIGRTGR G  G+A TF   + ++    +L  +LQEA Q +PP L+ L
Sbjct: 496 DFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFA-RELVKILQEAGQVVPPTLSAL 543

[Close]
BLAST of Lsi02G026920 vs. NCBI nr
Match: gi|659122435|ref|XP_008461142.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Cucumis melo])

HSP 1 Score: 1165.2 bits (3013), Expect = 0.0e+00
Identity = 593/597 (99.33%), Postives = 595/597 (99.66%), Query Frame = 1 

Query: 1   MDVQMKDEKSLEEGEDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL 60
           MDVQMKDEKSLEE +DYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL
Sbjct: 1   MDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL 60

Query: 61  LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP 120
           LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP
Sbjct: 61  LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP 120

Query: 121 LPIRRMPKKVCDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV 180
           LPIRRMPKK CDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV
Sbjct: 121 LPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV 180

Query: 181 QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL 240
           QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL
Sbjct: 181 QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL 240

Query: 241 ARQTYEVVEQFLIPMKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA 300
           ARQTYEVVEQFLIPMKEAGYPE+RPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA
Sbjct: 241 ARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA 300

Query: 301 KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA 360
           KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA
Sbjct: 301 KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA 360

Query: 361 LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH 420
           LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH
Sbjct: 361 LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH 420

Query: 421 EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM 480
           EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM
Sbjct: 421 EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM 480

Query: 481 PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP 540
           PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP
Sbjct: 481 PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP 540

Query: 541 MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598
           MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 541 MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 597

[Close]
BLAST of Lsi02G026920 vs. NCBI nr
Match: gi|449436164|ref|XP_004135864.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Cucumis sativus])

HSP 1 Score: 1163.7 bits (3009), Expect = 0.0e+00
Identity = 592/597 (99.16%), Postives = 595/597 (99.66%), Query Frame = 1 

Query: 1   MDVQMKDEKSLEEGEDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL 60
           MDVQMKDEKSLEE ++YVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL
Sbjct: 1   MDVQMKDEKSLEEEDEYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL 60

Query: 61  LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP 120
           LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP
Sbjct: 61  LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP 120

Query: 121 LPIRRMPKKVCDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV 180
           LPIRRMPKK CDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV
Sbjct: 121 LPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV 180

Query: 181 QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL 240
           QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL
Sbjct: 181 QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL 240

Query: 241 ARQTYEVVEQFLIPMKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA 300
           ARQTYEVVEQFLIPMKEAGYPE+RPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA
Sbjct: 241 ARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA 300

Query: 301 KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA 360
           KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA
Sbjct: 301 KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA 360

Query: 361 LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH 420
           LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH
Sbjct: 361 LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH 420

Query: 421 EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM 480
           EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM
Sbjct: 421 EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM 480

Query: 481 PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP 540
           PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP
Sbjct: 481 PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP 540

Query: 541 MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598
           MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 541 MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 597

[Close]
BLAST of Lsi02G026920 vs. NCBI nr
Match: gi|700190012|gb|KGN45245.1| (hypothetical protein Csa_7G432260 [Cucumis sativus])

HSP 1 Score: 1163.7 bits (3009), Expect = 0.0e+00
Identity = 592/597 (99.16%), Postives = 595/597 (99.66%), Query Frame = 1 

Query: 1   MDVQMKDEKSLEEGEDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL 60
           MDVQMKDEKSLEE ++YVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL
Sbjct: 121 MDVQMKDEKSLEEEDEYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL 180

Query: 61  LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP 120
           LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP
Sbjct: 181 LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP 240

Query: 121 LPIRRMPKKVCDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV 180
           LPIRRMPKK CDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV
Sbjct: 241 LPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV 300

Query: 181 QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL 240
           QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL
Sbjct: 301 QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL 360

Query: 241 ARQTYEVVEQFLIPMKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA 300
           ARQTYEVVEQFLIPMKEAGYPE+RPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA
Sbjct: 361 ARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA 420

Query: 301 KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA 360
           KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA
Sbjct: 421 KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA 480

Query: 361 LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH 420
           LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH
Sbjct: 481 LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH 540

Query: 421 EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM 480
           EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM
Sbjct: 541 EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM 600

Query: 481 PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP 540
           PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP
Sbjct: 601 PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP 660

Query: 541 MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598
           MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 661 MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 717

[Close]
BLAST of Lsi02G026920 vs. NCBI nr
Match: gi|1009129216|ref|XP_015881647.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 35 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 1101.3 bits (2847), Expect = 0.0e+00
Identity = 550/587 (93.70%), Postives = 574/587 (97.79%), Query Frame = 1 

Query: 11  LEEGEDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQMKRD 70
           +EE +DYVEYVPVAKRRAME QKIL RKGK+SALE+ELEKS+LAEAKPSLLVKASQ+KR+
Sbjct: 1   MEEDDDYVEYVPVAKRRAMEVQKILQRKGKSSALEDELEKSKLAEAKPSLLVKASQLKRE 60

Query: 71  QPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMPKKV 130
            PEVSPT+Q+VQQEKEMIEHLSDRKTLMSVRELAKGITY+EPL TGWKPPLPIRRM +K 
Sbjct: 61  APEVSPTQQLVQQEKEMIEHLSDRKTLMSVRELAKGITYSEPLPTGWKPPLPIRRMSRKQ 120

Query: 131 CDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGR 190
           CDLIRKQWHIIVDGD+IPPPIKNFKDMR PEP+LKKLK KGIVQPTPIQVQGLPVILSGR
Sbjct: 121 CDLIRKQWHIIVDGDDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVILSGR 180

Query: 191 DMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEVVEQ 250
           DMIGIAFTGSGKTLVFVLPLIM+ALQEE++MPI  GEGPFGLI+CPSRELARQTYEVVEQ
Sbjct: 181 DMIGIAFTGSGKTLVFVLPLIMVALQEEIIMPIAPGEGPFGLIVCPSRELARQTYEVVEQ 240

Query: 251 FLIPMKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCR 310
           FLIPMKEAGYPE+RPLLCIGGVDMRSQ+EVVKKGVHIVVATPGRLKD+LAKKKMNLDNCR
Sbjct: 241 FLIPMKEAGYPELRPLLCIGGVDMRSQLEVVKKGVHIVVATPGRLKDLLAKKKMNLDNCR 300

Query: 311 YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG 370
           YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP+KIQNFAR+ALVKPVTVNVG
Sbjct: 301 YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPSKIQNFARNALVKPVTVNVG 360

Query: 371 RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA 430
           RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVE 
Sbjct: 361 RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEG 420

Query: 431 VAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR 490
           VAIHGGKDQEEREYAISSFKA KKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR
Sbjct: 421 VAIHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR 480

Query: 491 IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAITNA 550
           IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDV+AIT+A
Sbjct: 481 IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAITSA 540

Query: 551 SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598
           SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 541 SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 587

[Close]
BLAST of Lsi02G026920 vs. NCBI nr
Match: gi|568878209|ref|XP_006492096.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Citrus sinensis])

HSP 1 Score: 1097.4 bits (2837), Expect = 0.0e+00
Identity = 547/587 (93.19%), Postives = 573/587 (97.61%), Query Frame = 1 

Query: 11  LEEGEDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQMKRD 70
           +EE +DYVEYVP+AKRRAMEAQKIL RKG+AS LE+ELEKS+LAE KPSLLVKASQ+KRD
Sbjct: 2   MEEEDDYVEYVPIAKRRAMEAQKILQRKGQASTLEDELEKSKLAEVKPSLLVKASQLKRD 61

Query: 71  QPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMPKKV 130
           QPE+SPTEQIVQQEKEMIE+LSDRKTLMSVRELAKGITYT+PLLTGWKPPLPIRRM KK 
Sbjct: 62  QPEISPTEQIVQQEKEMIENLSDRKTLMSVRELAKGITYTDPLLTGWKPPLPIRRMSKKA 121

Query: 131 CDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGR 190
           CDLIRKQWHIIVDG++IPPPIKNFKDMR PEP+LKKLK KGIVQPTPIQVQGLPV+LSGR
Sbjct: 122 CDLIRKQWHIIVDGEDIPPPIKNFKDMRFPEPILKKLKAKGIVQPTPIQVQGLPVVLSGR 181

Query: 191 DMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEVVEQ 250
           DMIGIAFTGSGKTLVFVLP+IMIA+ EE+MMPIV GEGPF LI+CPSRELARQTYEVVEQ
Sbjct: 182 DMIGIAFTGSGKTLVFVLPMIMIAMHEEMMMPIVPGEGPFCLIVCPSRELARQTYEVVEQ 241

Query: 251 FLIPMKEAGYPEIRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCR 310
           FL PM++AGYP++R LLCIGGVDMRSQ+EVVK+GVHIVVATPGRLKDMLAKKKMNLDNCR
Sbjct: 242 FLTPMRDAGYPDLRTLLCIGGVDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMNLDNCR 301

Query: 311 YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG 370
           YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG
Sbjct: 302 YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG 361

Query: 371 RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA 430
           RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA
Sbjct: 362 RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA 421

Query: 431 VAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR 490
           VA+HGGKDQEEREYAISSFKA KKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR
Sbjct: 422 VAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR 481

Query: 491 IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAITNA 550
           IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDV+AITNA
Sbjct: 482 IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVDAITNA 541

Query: 551 SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598
           SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 542 SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 588

The following BLAST results are available for this feature:
BLAST of Lsi02G026920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RH35_ARATH4.1e-30187.97DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana GN=RH35 PE=2 SV=1[more]
RH35A_ORYSJ1.2e-28179.18DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa subsp. japonica GN=Os02g... [more]
RH35B_ORYSJ1.3e-25975.88DEAD-box ATP-dependent RNA helicase 35B OS=Oryza sativa subsp. japonica GN=Os06g... [more]
RH43_ARATH1.9e-25381.50Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis thaliana GN=RH43 ... [more]
DDX41_MOUSE1.7e-19859.56Probable ATP-dependent RNA helicase DDX41 OS=Mus musculus GN=Ddx41 PE=1 SV=2[more]
BLAST of Lsi02G026920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6A2_CUCSA0.0e+0099.16Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432260 PE=4 SV=1[more]
A0A067E841_CITSI0.0e+0093.19Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g007831mg PE=4 SV=1[more]
V4UMQ8_9ROSI0.0e+0093.02Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025231mg PE=4 SV=1[more]
A5B7F0_VITVI0.0e+0093.19Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g08120 PE=4 SV=... [more]
A0A0D2UL31_GOSRA0.0e+0092.67Uncharacterized protein OS=Gossypium raimondii GN=B456_009G126600 PE=4 SV=1[more]
BLAST of Lsi02G026920 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G51280.12.3e-30287.97 DEAD-box protein abstrakt, putative[more]
AT4G33370.11.1e-25481.50 DEA(D/H)-box RNA helicase family protein[more]
AT1G55150.13.7e-8240.15 DEA(D/H)-box RNA helicase family protein[more]
AT2G47330.12.2e-7940.71 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
AT5G63120.22.9e-7940.33 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
BLAST of Lsi02G026920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659122435|ref|XP_008461142.1|0.0e+0099.33PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Cucumis melo][more]
gi|449436164|ref|XP_004135864.1|0.0e+0099.16PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Cucumis sativus][more]
gi|700190012|gb|KGN45245.1|0.0e+0099.16hypothetical protein Csa_7G432260 [Cucumis sativus][more]
gi|1009129216|ref|XP_015881647.1|0.0e+0093.70PREDICTED: DEAD-box ATP-dependent RNA helicase 35 isoform X1 [Ziziphus jujuba][more]
gi|568878209|ref|XP_006492096.1|0.0e+0093.19PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014014RNA_helicase_DEAD_Q_motif
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR001878Znf_CCHC
IPR001650Helicase_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0010501 RNA secondary structure unwinding
biological_process GO:0008150 biological_process
cellular_component GO:0071013 catalytic step 2 spliceosome
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0004004 ATP-dependent RNA helicase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004386 helicase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G026920.1Lsi02G026920.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 391..498
score: 8.9
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 417..498
score: 5.5
IPR001650Helicase, C-terminalPROFILEPS51194HELICASE_CTERcoord: 378..538
score: 23
IPR001878Zinc finger, CCHC-typeGENE3DG3DSA:4.10.60.10coord: 556..576
score: 3.
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 555..571
score: 1.
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 555..571
score: 0.
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 556..571
score: 9
IPR001878Zinc finger, CCHC-typeunknownSSF57756Retrovirus zinc finger-like domainscoord: 555..576
score: 1.8
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 176..355
score: 7.2
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 171..382
score: 6.1
IPR014001Helicase superfamily 1/2, ATP-binding domainPROFILEPS51192HELICASE_ATP_BIND_1coord: 183..367
score: 3
IPR014014RNA helicase, DEAD-box type, Q motifPROFILEPS51195Q_MOTIFcoord: 152..180
score: 10
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 136..372
score: 1.8E-78coord: 373..536
score: 4.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 228..513
score: 5.76
NoneNo IPR availableunknownCoilCoilcoord: 509..529
scor
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 105..588
score: 0.0coord: 2..50
score:
NoneNo IPR availablePANTHERPTHR24031:SF266DEAD-BOX ATP-DEPENDENT RNA HELICASE 35-RELATEDcoord: 105..588
score: 0.0coord: 2..50
score:

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi02G026920Csa7G432260Cucumber (Chinese Long) v2culsiB503
Lsi02G026920CSPI07G20350Wild cucumber (PI 183967)cpilsiB517
Lsi02G026920Cucsa.105640Cucumber (Gy14) v1cgylsiB133
Lsi02G026920CmaCh08G006110Cucurbita maxima (Rimu)cmalsiB822
Lsi02G026920CmoCh17G008470Cucurbita moschata (Rifu)cmolsiB337
Lsi02G026920CmoCh08G006010Cucurbita moschata (Rifu)cmolsiB809
Lsi02G026920Cla015344Watermelon (97103) v1lsiwmB176
Lsi02G026920MELO3C023444Melon (DHL92) v3.5.1lsimeB185
Lsi02G026920ClCG09G003100Watermelon (Charleston Gray)lsiwcgB160
Lsi02G026920MELO3C023444.2Melon (DHL92) v3.6.1lsimedB194
Lsi02G026920Cla97C09G165330Watermelon (97103) v2lsiwmbB213
Lsi02G026920Cp4.1LG17g08670Cucurbita pepo (Zucchini)cpelsiB262
Lsi02G026920Cp4.1LG12g07370Cucurbita pepo (Zucchini)cpelsiB113
Lsi02G026920CsGy7G018650Cucumber (Gy14) v2cgyblsiB472
Lsi02G026920Carg23133Silver-seed gourdcarlsiB130
Lsi02G026920Carg09602Silver-seed gourdcarlsiB937
Lsi02G026920CsaV3_7G032190Cucumber (Chinese Long) v3cuclsiB538
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi02G026920Bottle gourd (USVL1VR-Ls)lsilsiB052
Lsi02G026920Bottle gourd (USVL1VR-Ls)lsilsiB117
Lsi02G026920Cucumber (Gy14) v1cgylsiB109
Lsi02G026920Cucumber (Gy14) v1cgylsiB206
Lsi02G026920Cucurbita maxima (Rimu)cmalsiB238
Lsi02G026920Cucurbita maxima (Rimu)cmalsiB348
Lsi02G026920Cucurbita maxima (Rimu)cmalsiB418
Lsi02G026920Cucurbita maxima (Rimu)cmalsiB721
Lsi02G026920Cucurbita moschata (Rifu)cmolsiB225
Lsi02G026920Cucurbita moschata (Rifu)cmolsiB712
Lsi02G026920Cucurbita pepo (Zucchini)cpelsiB082
Lsi02G026920Cucurbita pepo (Zucchini)cpelsiB442
Lsi02G026920Cucurbita pepo (Zucchini)cpelsiB499
Lsi02G026920Wild cucumber (PI 183967)cpilsiB111
Lsi02G026920Wild cucumber (PI 183967)cpilsiB268
Lsi02G026920Cucumber (Chinese Long) v2culsiB113
Lsi02G026920Cucumber (Chinese Long) v2culsiB268
Lsi02G026920Melon (DHL92) v3.5.1lsimeB223
Lsi02G026920Watermelon (Charleston Gray)lsiwcgB168
Lsi02G026920Watermelon (Charleston Gray)lsiwcgB196
Lsi02G026920Watermelon (97103) v1lsiwmB191
Lsi02G026920Watermelon (97103) v1lsiwmB218
Lsi02G026920Melon (DHL92) v3.6.1lsimedB234
Lsi02G026920Silver-seed gourdcarlsiB106
Lsi02G026920Silver-seed gourdcarlsiB516
Lsi02G026920Cucumber (Chinese Long) v3cuclsiB289
Lsi02G026920Watermelon (97103) v2lsiwmbB189
Lsi02G026920Wax gourdlsiwgoB279