Lsi02G026130 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G026130
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	ADP-ribosylation factor
Location	chr02 : 32540863 .. 32543426 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGACAGCTGTTCCACGGTCAAAGTCAAATGCGCTTCAGAGAGGGGTTTCGCGCCAATTCTCAGTCGGAAGTGTAACTGCCGGCGCCAATCGTCTCTGGGTTTGCTTATATATTCTTTCCCACTCACACTCACAGCACATTCCAGAGTTCTACATCAACGGCCTTCTTCTTCCCTTTTCGATTGTTTGTTGCCGAAACCAAACCCTAGATACAATCCGAGGAAGAGACCGCGCATAATCGAAAGAAGTTAAGCTTCTGGTCTCGTCTCGTCTCATACGATGAAAAATCGGGGTAAATGCAACTCTCTTTCACACCCCTTTAGTTTTATATGAGGCAATTAGGTATTGACTGTGTTCTGTTCTGGGTTTGGAATTTTAAGGGTACGGCCGGACCGACTATTTCGATTTAGGGGTTCATTGGAGAACTCTCGATGTTAATCACATATTGTTCTTTGATTTGATTTTATTTCTTTTGCCTGTTTTCTATACTATTTGTATTTTTTATGGTTTCGATTACGGAGGATTAGGGCTTTTTTCCGTAGGTTGCTCTAATGGTTACGGGACTGTTCGTTTCATTCTCCGTCTCTGTTAATATCCTCAATCTGATATTTAAATAAATGTGTTGGCAGAAGAAGAGGACGAAAACTTCTTATATTCTTGAGATTGCTTCCGATAGTGTAGGGGACAAATGAAGCAGTTGCTCTTGATGAAGAAATTGATTGGGCAACGGAAGACTGGTGTGATTCCAACCCTAACGCAGTGAGTCGAATTTAAGTTATAAGATAGACAATAATACTGCAACTATGGGGCGTTGATTTTTATGTTTCCCAATTATTTGGTTTTTTTTTTCTCGATTCCAAGTCGGTAAACCCTGTGGGGTTCATTACTAGAACTCCACCATGGCAATACTCCTTCATGTTGAATTCATAATTTTCTTCTGCTCATTAATCTTCGTTGTTTGTCAACCATATCAAATATTGAACTTGTTACATTTTTTCATCTGGACAAATGTCTACATAAAACGAATATGTACTTTATGTTGAAGTAAAGAGTCAGTTCACTAGATTGTTACCTTGAATCACCACATTGTTACCTTGATCCAAGGAGGAAGGAATATATAGATGTCTCCCATCACTGCACTTCATTTTCATATGGTATATTTGACTATACCATGGTTCACACATTCTTCTTCATGTCGGTTTCACAATTTCCTTCTGCTTAAGCATTTTGTTGTTTAATTTCTCAACGATATGAAATATTAAACTGCCTAGATATTCCAATTGATTATTTATATATAAAAAGTACACAATAAAGTTTGATCAAAGAAGTCAATTAATTGATTGCCACTTTGCCACTTTGACTCACAATTTCCTTTCATACCCAAGTCTCTCGATAATCTACTTTTTAGAACTTGTTTCGTGGAAGATTCATAATTTAGCCTATGTCTTTTACTTGCAGGGTTTATTGCTGAGACTGTAGACTACAAAAGCATCAATTTCATGGTCTGAGATGTTGGGGGTCAAGACAAGGTATGAACTTCTGTATTGATTGTTTTGCCGTCTGGACCGACATTGAGTTAATTAAAATTTTCTCATGCTAGAATTCAGGTTTTTTTTTGTTCATTATATCTAAATGTGTCAATTATATACTATCTAATTAAATCATGTTCTTAATTGGTTGTCCAATAGATTCGTCTCTTGTGGATGCACTACTTCCAGAACACACAGGGTCTCATATTTGTTGTTGATAGCAATGATAGAGATGGAGTTGTTGAGGCCAGGGATGAATTGCATAGGAAATTGAATGAGGTATTTACATACTAACGTACTACCTAGTTTGATGAGCATCTGTTTGAAATCATTCATGAAGCCTGCTATATCACTTTTTTTCCCCCTTTTTTTTCTCTCTCTCTCTCTCTCTCTCTTTCTTTGGGAGTACTATTCAAATAGTTCAGGATTTACTATTTTCCTTTTTTTAAATTATTCACGATAAACTACGTAGGATTATTTTATGCATATATGCAATAAAAGGATCTAATTCTCTTGATGCAAAATTTTCAAAGTTGATATTTGGTGCTTATTCAACTTCGTGCACAAAAGTTAAGAACAACCTACCAAACTTGAACATGAAATCATTATTTCAGATTAGTGTATTCACACCTACTGCTTTGGGTATGAAAGGGTTTAAGGTCTTTAGCACAATTTCATTGTTAAGAAGAACAAGCCACCGTAACACACCTTTTATTTTATTTTTTCTTTGGAGAGAAAGTCATGGTAACTATTGTTGTTCACTTTCTATGGTTTCAAAGTATCCATGTCTCATTGGTTTGACATCATTGCTCAAGTTTCCTTTGCTAACAAAGAGTAGCTATGTCGTGAAAATTCAGATGGACATAATAAAGTTGGGGTCGTCCACCAACATCTGGTTGCAACTTTCAACACTCCATCACGTAAGAAATTTTCAATTGACATGATGAGCCACCATACGTGCGCCCTAAGTTCTAACTGGAATTACAATTTTGGTATTGCTGTGGTCCTAATAAGGTTAGGTTCTCATGCTTAA

mRNA sequence

ATGTGGACAGCTGTTCCACGGTCAAAGTCAAATGCGCTTCAGAGAGGGGTTTCGCGCCAATTCTCAGTCGGAAGTGTAACTGCCGGCGCCAATCGTCTCTGGGGGACAAATGAAGCAGTTGCTCTTGATGAAGAAATTGATTGGGCAACGGAAGACTGGTGTGATTCCAACCCTAACGCAATTCGTCTCTTGTGGATGCACTACTTCCAGAACACACAGGGTCTCATATTTGTTGTTGATAGCAATGATAGAGATGGAGTTGTTGAGGCCAGGGATGAATTGCATAGGAAATTGAATGAGTTGATATTTGGTGCTTATTCAACTTCGTGCACAAAAGTTAAGAACAACCTACCAAACTTGAACATGAAATCATTATTTCAGATTAGTGTATTCACACCTACTGCTTTGGATGGACATAATAAAGTTGGGGTCGTCCACCAACATCTGGTTGCAACTTTCAACACTCCATCACGTAAGAAATTTTCAATTGACATGATGAGCCACCATACGTGCGCCCTAAGTTCTAACTGGAATTACAATTTTGGTATTGCTGTGGTCCTAATAAGGTTAGGTTCTCATGCTTAA

Coding sequence (CDS)

ATGTGGACAGCTGTTCCACGGTCAAAGTCAAATGCGCTTCAGAGAGGGGTTTCGCGCCAATTCTCAGTCGGAAGTGTAACTGCCGGCGCCAATCGTCTCTGGGGGACAAATGAAGCAGTTGCTCTTGATGAAGAAATTGATTGGGCAACGGAAGACTGGTGTGATTCCAACCCTAACGCAATTCGTCTCTTGTGGATGCACTACTTCCAGAACACACAGGGTCTCATATTTGTTGTTGATAGCAATGATAGAGATGGAGTTGTTGAGGCCAGGGATGAATTGCATAGGAAATTGAATGAGTTGATATTTGGTGCTTATTCAACTTCGTGCACAAAAGTTAAGAACAACCTACCAAACTTGAACATGAAATCATTATTTCAGATTAGTGTATTCACACCTACTGCTTTGGATGGACATAATAAAGTTGGGGTCGTCCACCAACATCTGGTTGCAACTTTCAACACTCCATCACGTAAGAAATTTTCAATTGACATGATGAGCCACCATACGTGCGCCCTAAGTTCTAACTGGAATTACAATTTTGGTATTGCTGTGGTCCTAATAAGGTTAGGTTCTCATGCTTAA

Protein sequence

MWTAVPRSKSNALQRGVSRQFSVGSVTAGANRLWGTNEAVALDEEIDWATEDWCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAYSTSCTKVKNNLPNLNMKSLFQISVFTPTALDGHNKVGVVHQHLVATFNTPSRKKFSIDMMSHHTCALSSNWNYNFGIAVVLIRLGSHA

Homology

[Close]

BLAST of Lsi02G026130 vs. Swiss-Prot
Match: ARF_MAIZE (ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 5.0e-14
Identity = 37/48 (77.08%), Postives = 38/48 (79.17%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE 101
           W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNE 113

[Close]

BLAST of Lsi02G026130 vs. Swiss-Prot
Match: ARF2B_ARATH (ADP-ribosylation factor 2-B OS=Arabidopsis thaliana GN=ARF2-B PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.0e-14
Identity = 37/48 (77.08%), Postives = 38/48 (79.17%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE 101
           W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNE 113

[Close]

BLAST of Lsi02G026130 vs. Swiss-Prot
Match: ARF2A_ARATH (ADP-ribosylation factor 2-A OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 5.0e-14
Identity = 37/48 (77.08%), Postives = 38/48 (79.17%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE 101
           W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNE 113

[Close]

BLAST of Lsi02G026130 vs. Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 5.0e-14
Identity = 37/48 (77.08%), Postives = 38/48 (79.17%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE 101
           W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNE 113

[Close]

BLAST of Lsi02G026130 vs. Swiss-Prot
Match: ARF1_DAUCA (ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 5.0e-14
Identity = 37/48 (77.08%), Postives = 38/48 (79.17%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE 101
           W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNE 113

[Close]

BLAST of Lsi02G026130 vs. TrEMBL
Match: A5CB74_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006303 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 8.6e-13
Identity = 39/51 (76.47%), Postives = 40/51 (78.43%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIF 104
           W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE IF
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEGIF 116

[Close]

BLAST of Lsi02G026130 vs. TrEMBL
Match: A0A059APW5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01779 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.5e-12
Identity = 38/49 (77.55%), Postives = 39/49 (79.59%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNEL 102
           W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNEL
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEL 114

[Close]

BLAST of Lsi02G026130 vs. TrEMBL
Match: A0A0D2W7L7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G208600 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.9e-12
Identity = 37/50 (74.00%), Postives = 40/50 (80.00%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELI 103
           W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE++
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEVL 115

[Close]

BLAST of Lsi02G026130 vs. TrEMBL
Match: M1CC04_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG401024957 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.9e-12
Identity = 37/58 (63.79%), Postives = 41/58 (70.69%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAYSTSC 111
           W     + IR LW HYFQNTQGLIFVVDSNDRD + EARDELHR LNE+ +     SC
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRISEARDELHRMLNEVKYSPSHISC 123

[Close]

BLAST of Lsi02G026130 vs. TrEMBL
Match: A0A161WXX1_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_012321 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.9e-12
Identity = 52/114 (45.61%), Postives = 62/114 (54.39%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAYSTSCTK 112
           W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE            
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFA 125

Query: 113 VKNNLPN----------LNMKSLFQ---ISVFTPTALDGHNK----VGVVHQHL 150
            K +LPN          L + SL Q   I+ F    +  H+K    +G+V ++L
Sbjct: 126 NKQDLPNAMNAAEITDKLGLHSLRQRHCINAFRNPTILSHSKSIQLIGLVDRNL 179

[Close]

BLAST of Lsi02G026130 vs. TAIR10
Match: AT1G70490.1 (AT1G70490.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 79.3 bits (194), Expect = 2.8e-15
Identity = 37/48 (77.08%), Postives = 38/48 (79.17%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE 101
           W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNE 113

[Close]

BLAST of Lsi02G026130 vs. TAIR10
Match: AT1G23490.1 (AT1G23490.1 ADP-ribosylation factor 1)

HSP 1 Score: 79.3 bits (194), Expect = 2.8e-15
Identity = 37/48 (77.08%), Postives = 38/48 (79.17%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE 101
           W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNE 113

[Close]

BLAST of Lsi02G026130 vs. TAIR10
Match: AT1G10630.1 (AT1G10630.1 ADP-ribosylation factor A1F)

HSP 1 Score: 79.3 bits (194), Expect = 2.8e-15
Identity = 37/48 (77.08%), Postives = 38/48 (79.17%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE 101
           W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNE 113

[Close]

BLAST of Lsi02G026130 vs. TAIR10
Match: AT2G47170.1 (AT2G47170.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 79.3 bits (194), Expect = 2.8e-15
Identity = 37/48 (77.08%), Postives = 38/48 (79.17%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE 101
           W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNE 113

[Close]

BLAST of Lsi02G026130 vs. TAIR10
Match: AT3G62290.1 (AT3G62290.1 ADP-ribosylation factor A1E)

HSP 1 Score: 79.3 bits (194), Expect = 2.8e-15
Identity = 37/48 (77.08%), Postives = 38/48 (79.17%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNE 101
           W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNE 113

[Close]

BLAST of Lsi02G026130 vs. NCBI nr
Match: gi|147825252|emb|CAN71086.1| (hypothetical protein VITISV_006303 [Vitis vinifera])

HSP 1 Score: 82.0 bits (201), Expect = 1.2e-12
Identity = 39/51 (76.47%), Postives = 40/51 (78.43%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIF 104
           W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE IF
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEGIF 116

[Close]

BLAST of Lsi02G026130 vs. NCBI nr
Match: gi|629089754|gb|KCW56007.1| (hypothetical protein EUGRSUZ_I01779 [Eucalyptus grandis])

HSP 1 Score: 81.3 bits (199), Expect = 2.1e-12
Identity = 38/49 (77.55%), Postives = 39/49 (79.59%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNEL 102
           W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNEL
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEL 114

[Close]

BLAST of Lsi02G026130 vs. NCBI nr
Match: gi|763815572|gb|KJB82424.1| (hypothetical protein B456_013G208600 [Gossypium raimondii])

HSP 1 Score: 80.9 bits (198), Expect = 2.7e-12
Identity = 37/50 (74.00%), Postives = 40/50 (80.00%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELI 103
           W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE++
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEVL 115

[Close]

BLAST of Lsi02G026130 vs. NCBI nr
Match: gi|1021045784|gb|KZN03565.1| (hypothetical protein DCAR_012321 [Daucus carota subsp. sativus])

HSP 1 Score: 80.9 bits (198), Expect = 2.7e-12
Identity = 52/114 (45.61%), Postives = 62/114 (54.39%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNELIFGAYSTSCTK 112
           W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE            
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFA 125

Query: 113 VKNNLPN----------LNMKSLFQ---ISVFTPTALDGHNK----VGVVHQHL 150
            K +LPN          L + SL Q   I+ F    +  H+K    +G+V ++L
Sbjct: 126 NKQDLPNAMNAAEITDKLGLHSLRQRHCINAFRNPTILSHSKSIQLIGLVDRNL 179

[Close]

BLAST of Lsi02G026130 vs. NCBI nr
Match: gi|224122860|ref|XP_002318934.1| (hypothetical protein POPTR_0013s00690g [Populus trichocarpa])

HSP 1 Score: 80.1 bits (196), Expect = 4.7e-12
Identity = 37/49 (75.51%), Postives = 39/49 (79.59%), Query Frame = 1


Query: 53  WCDSNPNAIRLLWMHYFQNTQGLIFVVDSNDRDGVVEARDELHRKLNEL 102
           W     + IR LW HYFQNTQGLIFVVDSNDRD VVEARDELHR LNE+
Sbjct: 66  WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEV 114

The following BLAST results are available for this feature:

BLAST of Lsi02G026130 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ARF_MAIZE	5.0e-14	77.08	ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2	[more]
ARF2B_ARATH	5.0e-14	77.08	ADP-ribosylation factor 2-B OS=Arabidopsis thaliana GN=ARF2-B PE=2 SV=1	[more]
ARF2A_ARATH	5.0e-14	77.08	ADP-ribosylation factor 2-A OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=2	[more]
ARF1_ARATH	5.0e-14	77.08	ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2	[more]
ARF1_DAUCA	5.0e-14	77.08	ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2	[more]

BLAST of Lsi02G026130 vs. TrEMBL


Match Name	E-value	Identity	Description
A5CB74_VITVI	8.6e-13	76.47	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006303 PE=3 SV=1	[more]
A0A059APW5_EUCGR	1.5e-12	77.55	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01779 PE=3 SV=1	[more]
A0A0D2W7L7_GOSRA	1.9e-12	74.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G208600 PE=3 SV=1	[more]
M1CC04_SOLTU	1.9e-12	63.79	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG401024957 PE=3 SV=1	[more]
A0A161WXX1_DAUCA	1.9e-12	45.61	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_012321 PE=4 SV=1	[more]

BLAST of Lsi02G026130 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G70490.1	2.8e-15	77.08	Ras-related small GTP-binding family protein	[more]
AT1G23490.1	2.8e-15	77.08	ADP-ribosylation factor 1	[more]
AT1G10630.1	2.8e-15	77.08	ADP-ribosylation factor A1F	[more]
AT2G47170.1	2.8e-15	77.08	Ras-related small GTP-binding family protein	[more]
AT3G62290.1	2.8e-15	77.08	ADP-ribosylation factor A1E	[more]

BLAST of Lsi02G026130 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|147825252\|emb\|CAN71086.1\|	1.2e-12	76.47	hypothetical protein VITISV_006303 [Vitis vinifera]	[more]
gi\|629089754\|gb\|KCW56007.1\|	2.1e-12	77.55	hypothetical protein EUGRSUZ_I01779 [Eucalyptus grandis]	[more]
gi\|763815572\|gb\|KJB82424.1\|	2.7e-12	74.00	hypothetical protein B456_013G208600 [Gossypium raimondii]	[more]
gi\|1021045784\|gb\|KZN03565.1\|	2.7e-12	45.61	hypothetical protein DCAR_012321 [Daucus carota subsp. sativus]	[more]
gi\|224122860\|ref\|XP_002318934.1\|	4.7e-12	75.51	hypothetical protein POPTR_0013s00690g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR006689	Small_GTPase_ARF/SAR

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007264	small GTPase mediated signal transduction
cellular_component	GO:0005622	intracellular
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G026130.1	Lsi02G026130.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 60..100 score: 7.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 61..174 score: 4.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 61..172 score: 3.
None	No IPR available	PANTHER	PTHR11711	ADP RIBOSYLATION FACTOR-RELATED	coord: 61..100 score: 1.0
None	No IPR available	PANTHER	PTHR11711:SF181	ADP-RIBOSYLATION FACTOR A1F	coord: 61..100 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G026130	Silver-seed gourd	carlsiB321
Lsi02G026130	Silver-seed gourd	carlsiB409
Lsi02G026130	Silver-seed gourd	carlsiB423
Lsi02G026130	Silver-seed gourd	carlsiB473
Lsi02G026130	Silver-seed gourd	carlsiB697
Lsi02G026130	Silver-seed gourd	carlsiB747
Lsi02G026130	Silver-seed gourd	carlsiB839
Lsi02G026130	Cucumber (Chinese Long) v3	cuclsiB043
Lsi02G026130	Cucumber (Chinese Long) v3	cuclsiB538
Lsi02G026130	Watermelon (97103) v2	lsiwmbB162
Lsi02G026130	Watermelon (97103) v2	lsiwmbB180
Lsi02G026130	Watermelon (97103) v2	lsiwmbB213
Lsi02G026130	Wax gourd	lsiwgoB202
Lsi02G026130	Wax gourd	lsiwgoB279
Lsi02G026130	Bottle gourd (USVL1VR-Ls)	lsilsiB116
Lsi02G026130	Cucumber (Gy14) v1	cgylsiB030
Lsi02G026130	Cucumber (Gy14) v1	cgylsiB228
Lsi02G026130	Cucurbita maxima (Rimu)	cmalsiB348
Lsi02G026130	Cucurbita maxima (Rimu)	cmalsiB418
Lsi02G026130	Cucurbita maxima (Rimu)	cmalsiB570
Lsi02G026130	Cucurbita maxima (Rimu)	cmalsiB822
Lsi02G026130	Cucurbita moschata (Rifu)	cmolsiB039
Lsi02G026130	Cucurbita moschata (Rifu)	cmolsiB101
Lsi02G026130	Cucurbita moschata (Rifu)	cmolsiB337
Lsi02G026130	Cucurbita moschata (Rifu)	cmolsiB404
Lsi02G026130	Cucurbita moschata (Rifu)	cmolsiB809
Lsi02G026130	Cucurbita pepo (Zucchini)	cpelsiB113
Lsi02G026130	Cucurbita pepo (Zucchini)	cpelsiB238
Lsi02G026130	Cucurbita pepo (Zucchini)	cpelsiB262
Lsi02G026130	Cucurbita pepo (Zucchini)	cpelsiB293
Lsi02G026130	Cucurbita pepo (Zucchini)	cpelsiB443
Lsi02G026130	Cucurbita pepo (Zucchini)	cpelsiB541
Lsi02G026130	Wild cucumber (PI 183967)	cpilsiB045
Lsi02G026130	Wild cucumber (PI 183967)	cpilsiB171
Lsi02G026130	Wild cucumber (PI 183967)	cpilsiB517
Lsi02G026130	Cucumber (Chinese Long) v2	culsiB172
Lsi02G026130	Cucumber (Chinese Long) v2	culsiB503
Lsi02G026130	Melon (DHL92) v3.5.1	lsimeB185
Lsi02G026130	Melon (DHL92) v3.5.1	lsimeB212
Lsi02G026130	Watermelon (Charleston Gray)	lsiwcgB160
Lsi02G026130	Watermelon (Charleston Gray)	lsiwcgB162
Lsi02G026130	Watermelon (97103) v1	lsiwmB176
Lsi02G026130	Watermelon (97103) v1	lsiwmB178
Lsi02G026130	Cucumber (Gy14) v2	cgyblsiB037
Lsi02G026130	Cucumber (Gy14) v2	cgyblsiB156
Lsi02G026130	Cucumber (Gy14) v2	cgyblsiB472
Lsi02G026130	Melon (DHL92) v3.6.1	lsimedB194
Lsi02G026130	Melon (DHL92) v3.6.1	lsimedB218
Lsi02G026130	Melon (DHL92) v3.6.1	lsimedB221