Lsi02G023830 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G023830
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Desiccation-related protein PCC13-62
Location	chr02 : 30512688 .. 30513744 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGGAAGTTTAATTGTGGGAAAAGTTCCTCCAAGGCCATTGTTGGATCTAAGAAAGAAAGTTATTGCAGACCTTTTTCAACAAGCATTTGACGAGCCACTCATTCCTCCTTTCGACCCTTATGCCACTCCCCTTAACATCGTCCTCCTTCTTCAGTTCATTACTTACAACGGAATGGTCGGCCTCGTCGGAGCAGCCCCGGCGTTAGCTTTGCTTAAAAATCGTGAGGTAACAGAACGAACAAACAAACCATTCATAAATTCTTTTGGTATCTAAACATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAATTACTACAGACAGAAGAAAAATATCAAATTATTTATAAATATCGACAATAAAATTTTTCTATATTTGTAAATAGTTTGGCTCATTTTTCTATATTGGAAAAAAGCCCAAATTTTAAAGGGGACTTTTTAAAAATAAAAAAATAAAGTAAACTATTTACACAAAATAACAAAATTTTTAGATGATTGGATAGATGATGATAGAAGTCTATCAAGGTCTATCGGTGATAGAAATGATAGAAGTCTATCACTGATAGATGCTGATAGAAGTCTATCAATGTCTATCAGTGATTTTTTTGCTATTTTTTGTAAATAGTTTGACATTTTTTTTATTTGTAAAAATTTCCCAATTTTAAATTATTGAAACTTTTATAATTATTATAACTATTGCTAATTTATTTTTTAGGCGTACACAAAATTTCTAGCAATTGAGGCGGGACAAAATGCTGTTCTCCGAGGGTATTTGTCCGAAAGGGAAAATGACAGGGTGGTTCCCTATAATATAACTGTGGCGGAGTTCACGAGTCGCACGTCGGAGTTGGCGAACCGGCTCGGGAAATGTGGTCTGAAAGACGAAGGAATTAGGGTTCCTCGGCCGCTCGGGGCAGATAATCGAACCGAGAGCAACGTTCTTGCTGGTGATGTTAACTCTCTTGCATATACACGAACTACAAAGGAGATCTTGCGCGTAATTTATGGAACCGGCCGTGCAAGTATCCCTGGTGCATTTTATACCCAA

mRNA sequence

CTTGGAAGTTTAATTGTGGGAAAAGTTCCTCCAAGGCCATTGTTGGATCTAAGAAAGAAAGTTATTGCAGACCTTTTTCAACAAGCATTTGACGAGCCACTCATTCCTCCTTTCGACCCTTATGCCACTCCCCTTAACATCGTCCTCCTTCTTCAGTTCATTACTTACAACGGAATGGTCGGCCTCGTCGGAGCAGCCCCGGCGTTAGCTTTGCTTAAAAATCGGTATTTGTCCGAAAGGGAAAATGACAGGGTGGTTCCCTATAATATAACTGTGGCGGAGTTCACGAGTCGCACGTCGGAGTTGGCGAACCGGCTCGGGAAATGTGGTCTGAAAGACGAAGGAATTAGGGTTCCTCGGCCGCTCGGGGCAGATAATCGAACCGAGAGCAACGTTCTTGCTGGTGATGTTAACTCTCTTGCATATACACGAACTACAAAGGAGATCTTGCGCGTAATTTATGGAACCGGCCGTGCAAGTATCCCTGGTGCATTTTATACCCAA

Coding sequence (CDS)

CTTGGAAGTTTAATTGTGGGAAAAGTTCCTCCAAGGCCATTGTTGGATCTAAGAAAGAAAGTTATTGCAGACCTTTTTCAACAAGCATTTGACGAGCCACTCATTCCTCCTTTCGACCCTTATGCCACTCCCCTTAACATCGTCCTCCTTCTTCAGTTCATTACTTACAACGGAATGGTCGGCCTCGTCGGAGCAGCCCCGGCGTTAGCTTTGCTTAAAAATCGGTATTTGTCCGAAAGGGAAAATGACAGGGTGGTTCCCTATAATATAACTGTGGCGGAGTTCACGAGTCGCACGTCGGAGTTGGCGAACCGGCTCGGGAAATGTGGTCTGAAAGACGAAGGAATTAGGGTTCCTCGGCCGCTCGGGGCAGATAATCGAACCGAGAGCAACGTTCTTGCTGGTGATGTTAACTCTCTTGCATATACACGAACTACAAAGGAGATCTTGCGCGTAATTTATGGAACCGGCCGTGCAAGTATCCCTGGTGCATTTTATACCCAA

Protein sequence

LGSLIVGKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALALLKNRYLSERENDRVVPYNITVAEFTSRTSELANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFYTQ

Homology

[Close]

BLAST of Lsi02G023830 vs. Swiss-Prot
Match: DRPE_CRAPL (Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.3e-28
Identity = 74/174 (42.53%), Postives = 91/174 (52.30%), Query Frame = 1


Query: 11  PRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALA 70
           PRPLLDL  K  A +   AF + L PPFDPYA  +N +L    + Y G+ G VGA P L 
Sbjct: 118 PRPLLDLSAKSFATVMDSAFGKTLKPPFDPYANDINYLLACYVVPYVGLTGYVGANPKLE 177

Query: 71  LLKNR-------------------YLSERENDRVVPYNITVAEFTSRTSELANRLGKCGL 130
              +R                    L ER  D+V PY ITVAEFT++ SEL N+LG  G+
Sbjct: 178 SPVSRKLVAGLLAVEAGQDAIIRALLYERATDKVEPYGITVAEFTNKISELRNKLGDKGV 237

Query: 131 KDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAF 166
           KD G+ V   LGA+ +   NVLAGD NSLA+ RT +  L           P AF
Sbjct: 238 KDLGLIVEPELGAEGKISGNVLAGDKNSLAFPRTPERCLGSCTAAAMRPSPAAF 291

[Close]

BLAST of Lsi02G023830 vs. TrEMBL
Match: A0A0A0K965_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396330 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.9e-40
Identity = 90/179 (50.28%), Postives = 118/179 (65.92%), Query Frame = 1


Query: 7   GKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAA 66
           G+   RPLL+L K+V +D+F +A    L P FDPY+  +N +L      Y G+VGLVGA 
Sbjct: 125 GRGIKRPLLNLSKEVFSDIFDEAIGFKLEPRFDPYSNSINFLLAANMFPYTGLVGLVGAT 184

Query: 67  PALALLKNRYLS-------------------ERENDRVVPYNITVAEFTSRTSELANRLG 126
           P L L ++R L+                   +R N+ V PYNITVAEFT+ TS LAN+LG
Sbjct: 185 PLLLLPQSRKLAASLLGAESGQNAVIRTLLYQRANETVDPYNITVAEFTNLTSTLANKLG 244

Query: 127 KCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY 167
           KCGL+DEGI VP  LGA+NRTESN+LA DVNS +Y+RT +E+LR++YG+G  S  GAF+
Sbjct: 245 KCGLRDEGIMVPLSLGAENRTESNILAADVNSRSYSRTVRELLRILYGSGSESKVGAFF 303

[Close]

BLAST of Lsi02G023830 vs. TrEMBL
Match: A0A151T655_CAJCA (Desiccation-related protein PCC13-62 OS=Cajanus cajan GN=KK1_017064 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 7.4e-37
Identity = 86/175 (49.14%), Postives = 103/175 (58.86%), Query Frame = 1


Query: 11  PRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALA 70
           PRPLLDLR   IA L  +AF   L PPFDPYA  +N +L    I Y G+ G VGA P L 
Sbjct: 124 PRPLLDLRASSIAKLMDRAFGRTLNPPFDPYANSINFILAAYVIPYVGLTGYVGANPLLQ 183

Query: 71  LLKNR-------------------YLSERENDRVVPYNITVAEFTSRTSELANRLGKCGL 130
              +R                    L ERE   V PY +TVAEFT+R S L N+LGK G+
Sbjct: 184 KPSSRKLVAGLLGVESGQDAVIRALLYEREAQLVQPYGVTVAEFTNRISRLRNKLGKAGV 243

Query: 131 KDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY 167
           KDEGI VPR  GA+ R   N+L GD NSL+Y RT KEILR++YG+G   +PG F+
Sbjct: 244 KDEGITVPRAEGAEGRVMGNILVGDKNSLSYARTPKEILRIVYGSGDEHVPGGFF 298

[Close]

BLAST of Lsi02G023830 vs. TrEMBL
Match: W1NYH2_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00106p00055220 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 8.2e-36
Identity = 84/175 (48.00%), Postives = 100/175 (57.14%), Query Frame = 1


Query: 11  PRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALA 70
           PRPLLDL     A LF  AF+ PL PPFDPY   LN +L +  I Y G+ G VGA P L 
Sbjct: 123 PRPLLDLSPNNFAKLFDMAFEHPLSPPFDPYINSLNYILAVYVIPYVGLTGYVGANPNLQ 182

Query: 71  LLKNR-------------------YLSERENDRVVPYNITVAEFTSRTSELANRLGKCGL 130
              ++                    L ER  D V PY  TVAEFT R SEL NRLG  G+
Sbjct: 183 AYASKKLVAGLLAVESGQDAVIRALLYERAEDMVKPYEYTVAEFTDRISELRNRLGHAGI 242

Query: 131 KDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY 167
           KDEG+ VP  LGA+N+T  N+L+ D NSLAY RT  E+LR++Y TG    PG F+
Sbjct: 243 KDEGLVVPPELGAENKTSGNILSADYNSLAYGRTPAEVLRIVYSTGDEHKPGGFF 297

[Close]

BLAST of Lsi02G023830 vs. TrEMBL
Match: V4RZB9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006860mg PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 8.2e-36
Identity = 82/175 (46.86%), Postives = 109/175 (62.29%), Query Frame = 1


Query: 11  PRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPAL- 70
           PRPLLDL     A +  +AF +PL PPFDPYA  +N ++    I Y G+ G VGA P L 
Sbjct: 111 PRPLLDLSAGSFAKVIDKAFGKPLNPPFDPYANSINYLIASYLIPYVGLTGYVGANPNLQ 170

Query: 71  -ALLKN-----------------RYLSERENDRVVPYNITVAEFTSRTSELANRLGKCGL 130
            A+ K                   +L E+ N++V PY I VAEFT++ S+L N LG+ GL
Sbjct: 171 NAISKRLVAGLLGVESGQDAVIRAFLYEKANEKVHPYGIRVAEFTNKISQLRNTLGRSGL 230

Query: 131 KDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY 167
           KDEG+ VP+ LGA+ + E NVLAGD NS+AY RT +E+LR++YG+G   +PG FY
Sbjct: 231 KDEGLVVPKALGAEGKIEGNVLAGDENSVAYDRTPEEVLRIVYGSGNERVPGGFY 285

[Close]

BLAST of Lsi02G023830 vs. TrEMBL
Match: A0A022QNZ3_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a010120mg PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 8.2e-36
Identity = 85/175 (48.57%), Postives = 106/175 (60.57%), Query Frame = 1


Query: 11  PRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALA 70
           PRPLL+L  +  A++F +AF   L+PPFDPY   L+ +L    + Y G+VG VG  P L 
Sbjct: 129 PRPLLNLSAENFANIFNEAFGYELVPPFDPYRNSLSYMLASYVVPYVGLVGYVGTNPKLI 188

Query: 71  -------------------LLKNRYLSERENDRVVPYNITVAEFTSRTSELANRLGKCGL 130
                               +   YL ER    V PYN TVAEFT R SEL NRL +CG+
Sbjct: 189 GYVSKRLLVGLMGVEAGQDAVIREYLYERAAKVVHPYNHTVAEFTIRISELRNRLARCGI 248

Query: 131 KDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY 167
           KDEGI VP  LGA+NRT SNVL+ D NSL+Y+RT  EILR++YGTG   +PG F+
Sbjct: 249 KDEGIIVPPFLGAENRTVSNVLSADYNSLSYSRTPPEILRIVYGTGSECVPGGFF 303

[Close]

BLAST of Lsi02G023830 vs. TAIR10
Match: AT1G47980.1 (AT1G47980.1 unknown protein)

HSP 1 Score: 136.0 bits (341), Expect = 2.2e-32
Identity = 72/174 (41.38%), Postives = 100/174 (57.47%), Query Frame = 1


Query: 12  RPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALAL 71
           RP LDL KK  A +  +AF    +PPF+PYA   N ++    + Y G+ G VGA P L  
Sbjct: 123 RPQLDLSKKAFAKVMDKAFGVKFVPPFNPYANSYNYLIASYLVPYVGLTGYVGANPKLQC 182

Query: 72  LKNRYLS------ERENDRVV-------------PYNITVAEFTSRTSELANRLGKCGLK 131
             +R L       E   D V+             PY +TVA FT + S+L N+LGK G+K
Sbjct: 183 PASRKLVAGLLGVESGQDAVIRGMLYARAAHIVYPYGVTVAAFTDKISDLRNKLGKAGVK 242

Query: 132 DEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY 167
           DEG+ VP+ +GA+ +   NVL G+  SL++ RT +EILR++YG+G  S+PG FY
Sbjct: 243 DEGLIVPKFMGAEGQVIGNVLVGNELSLSFDRTPEEILRIVYGSGNESVPGGFY 296

[Close]

BLAST of Lsi02G023830 vs. TAIR10
Match: AT3G62730.1 (AT3G62730.1 unknown protein)

HSP 1 Score: 132.5 bits (332), Expect = 2.4e-31
Identity = 75/176 (42.61%), Postives = 98/176 (55.68%), Query Frame = 1


Query: 11  PRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALA 70
           PRPL++L ++  A    +A      P FDPYA  LN +L   +I Y G+ G VG  P L 
Sbjct: 113 PRPLINLTRENFAVFMDRAVGRKSNPRFDPYANSLNYLLASYYIPYVGLTGYVGTIPYLV 172

Query: 71  LLKNR-------------------YLSERENDRVVPYN-ITVAEFTSRTSELANRLGKCG 130
               +                    L ER+N++V  Y  +TVAE T+  S L N LG CG
Sbjct: 173 YFNIKKLVAGLLGVESGQDAVIRTLLYERQNEKVEEYGGVTVAELTNEISNLRNELGMCG 232

Query: 131 LKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY 167
           +KDEG+ VP  LGA+NRT SN+L+ D  SL+Y RT +EILRV+YGTG    PG F+
Sbjct: 233 IKDEGLCVPLWLGAENRTTSNILSADPYSLSYDRTAQEILRVMYGTGDEHRPGGFW 288

[Close]

BLAST of Lsi02G023830 vs. NCBI nr
Match: gi|659101436|ref|XP_008451604.1| (PREDICTED: desiccation-related protein PCC13-62-like [Cucumis melo])

HSP 1 Score: 194.5 bits (493), Expect = 1.5e-46
Identity = 99/185 (53.51%), Postives = 120/185 (64.86%), Query Frame = 1


Query: 1   LGSLIVGKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMV 60
           L   I G V PRPLLDL K+ I  L  +AFD PL PPFDPY  PL+  +L  FITY G+ 
Sbjct: 120 LAKFIEGPVIPRPLLDLTKETIGRLIGKAFDPPLSPPFDPYRNPLHYFILCNFITYTGLT 179

Query: 61  GLVGAAPALALLKNR-------------------YLSERENDRVVPYNITVAEFTSRTSE 120
           GLV +AP     ++R                   YL +R NDRV+PY ITVAEFT+ TSE
Sbjct: 180 GLVASAPTFISREDRTVVARFEAMEAGQNAICRQYLYQRSNDRVLPYQITVAEFTNHTSE 239

Query: 121 LANRLGKCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASI 167
           LANRLG+CG+KDEG+ VPR LGA+NRTESN+LA D NSL YTRT  E++R++ G    S 
Sbjct: 240 LANRLGRCGMKDEGVIVPRLLGAENRTESNILAADSNSLTYTRTIPELMRILQGNENESE 299

[Close]

BLAST of Lsi02G023830 vs. NCBI nr
Match: gi|449436521|ref|XP_004136041.1| (PREDICTED: desiccation-related protein PCC13-62 [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 2.7e-40
Identity = 90/179 (50.28%), Postives = 118/179 (65.92%), Query Frame = 1


Query: 7   GKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAA 66
           G+   RPLL+L K+V +D+F +A    L P FDPY+  +N +L      Y G+VGLVGA 
Sbjct: 125 GRGIKRPLLNLSKEVFSDIFDEAIGFKLEPRFDPYSNSINFLLAANMFPYTGLVGLVGAT 184

Query: 67  PALALLKNRYLS-------------------ERENDRVVPYNITVAEFTSRTSELANRLG 126
           P L L ++R L+                   +R N+ V PYNITVAEFT+ TS LAN+LG
Sbjct: 185 PLLLLPQSRKLAASLLGAESGQNAVIRTLLYQRANETVDPYNITVAEFTNLTSTLANKLG 244

Query: 127 KCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY 167
           KCGL+DEGI VP  LGA+NRTESN+LA DVNS +Y+RT +E+LR++YG+G  S  GAF+
Sbjct: 245 KCGLRDEGIMVPLSLGAENRTESNILAADVNSRSYSRTVRELLRILYGSGSESKVGAFF 303

[Close]

BLAST of Lsi02G023830 vs. NCBI nr
Match: gi|659101432|ref|XP_008451603.1| (PREDICTED: desiccation-related protein PCC13-62-like [Cucumis melo])

HSP 1 Score: 169.5 bits (428), Expect = 5.1e-39
Identity = 89/179 (49.72%), Postives = 116/179 (64.80%), Query Frame = 1


Query: 7   GKVPPRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAA 66
           G+   RPLL+L K+V +D+F +A    L P FDPY+  +N +L      Y G+VGLVGA 
Sbjct: 118 GRGIKRPLLNLSKEVFSDIFDKAIGFKLKPRFDPYSNSINFLLAANLFPYTGLVGLVGAT 177

Query: 67  PALALLKNRYLS-------------------ERENDRVVPYNITVAEFTSRTSELANRLG 126
           P L L ++R L+                   +R N+ V PYNITVAEFT+RTS LAN+L 
Sbjct: 178 PLLLLPQSRKLAASLLGAESGQNAVIRTLLYQRANETVHPYNITVAEFTNRTSTLANKLA 237

Query: 127 KCGLKDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY 167
            CGLKDEGI VPR LGA+NRTESN+LA DV S +Y+RT +E+LR++Y +G  S  GAF+
Sbjct: 238 NCGLKDEGIIVPRSLGAENRTESNILAADVYSRSYSRTVRELLRILYASGSESKVGAFF 296

[Close]

BLAST of Lsi02G023830 vs. NCBI nr
Match: gi|720043228|ref|XP_010269493.1| (PREDICTED: desiccation-related protein PCC13-62-like [Nelumbo nucifera])

HSP 1 Score: 164.9 bits (416), Expect = 1.3e-37
Identity = 89/175 (50.86%), Postives = 107/175 (61.14%), Query Frame = 1


Query: 11  PRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALA 70
           PRPL+DL     A +F Q+F  PL+PPFDPY   L+ +L    I Y G+ G VGA P L 
Sbjct: 132 PRPLMDLSPSNFAKIFDQSFGYPLVPPFDPYRDSLSYMLASYVIPYMGLNGYVGANPFLN 191

Query: 71  LLKNR-------------------YLSERENDRVVPYNITVAEFTSRTSELANRLGKCGL 130
             K++                   YL ER  + V PYN TVAEFT R SEL NRLGKCG+
Sbjct: 192 GYKSKRLGAGLLAVEGGQDADIRHYLYERAGEIVHPYNYTVAEFTIRISELRNRLGKCGI 251

Query: 131 KDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY 167
           KDEGI VP  LGA+NRT SN L+ D NS++Y RT +EILRV+Y TG   +PG FY
Sbjct: 252 KDEGIIVPPELGAENRTCSNALSADFNSISYARTPQEILRVLYATGCEHLPGGFY 306

[Close]

BLAST of Lsi02G023830 vs. NCBI nr
Match: gi|1012351337|gb|KYP62526.1| (Desiccation-related protein PCC13-62 [Cajanus cajan])

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-36
Identity = 86/175 (49.14%), Postives = 103/175 (58.86%), Query Frame = 1


Query: 11  PRPLLDLRKKVIADLFQQAFDEPLIPPFDPYATPLNIVLLLQFITYNGMVGLVGAAPALA 70
           PRPLLDLR   IA L  +AF   L PPFDPYA  +N +L    I Y G+ G VGA P L 
Sbjct: 124 PRPLLDLRASSIAKLMDRAFGRTLNPPFDPYANSINFILAAYVIPYVGLTGYVGANPLLQ 183

Query: 71  LLKNR-------------------YLSERENDRVVPYNITVAEFTSRTSELANRLGKCGL 130
              +R                    L ERE   V PY +TVAEFT+R S L N+LGK G+
Sbjct: 184 KPSSRKLVAGLLGVESGQDAVIRALLYEREAQLVQPYGVTVAEFTNRISRLRNKLGKAGV 243

Query: 131 KDEGIRVPRPLGADNRTESNVLAGDVNSLAYTRTTKEILRVIYGTGRASIPGAFY 167
           KDEGI VPR  GA+ R   N+L GD NSL+Y RT KEILR++YG+G   +PG F+
Sbjct: 244 KDEGITVPRAEGAEGRVMGNILVGDKNSLSYARTPKEILRIVYGSGDEHVPGGFF 298

The following BLAST results are available for this feature:

BLAST of Lsi02G023830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DRPE_CRAPL	5.3e-28	42.53	Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum PE=2 SV=1	[more]

BLAST of Lsi02G023830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K965_CUCSA	1.9e-40	50.28	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396330 PE=4 SV=1	[more]
A0A151T655_CAJCA	7.4e-37	49.14	Desiccation-related protein PCC13-62 OS=Cajanus cajan GN=KK1_017064 PE=4 SV=1	[more]
W1NYH2_AMBTC	8.2e-36	48.00	Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00106p00055220 PE=4 SV=...	[more]
V4RZB9_9ROSI	8.2e-36	46.86	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006860mg PE=4 SV=1	[more]
A0A022QNZ3_ERYGU	8.2e-36	48.57	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a010120mg PE=4 SV=1	[more]

BLAST of Lsi02G023830 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G47980.1	2.2e-32	41.38	unknown protein	[more]
AT3G62730.1	2.4e-31	42.61	unknown protein	[more]

BLAST of Lsi02G023830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659101436\|ref\|XP_008451604.1\|	1.5e-46	53.51	PREDICTED: desiccation-related protein PCC13-62-like [Cucumis melo]	[more]
gi\|449436521\|ref\|XP_004136041.1\|	2.7e-40	50.28	PREDICTED: desiccation-related protein PCC13-62 [Cucumis sativus]	[more]
gi\|659101432\|ref\|XP_008451603.1\|	5.1e-39	49.72	PREDICTED: desiccation-related protein PCC13-62-like [Cucumis melo]	[more]
gi\|720043228\|ref\|XP_010269493.1\|	1.3e-37	50.86	PREDICTED: desiccation-related protein PCC13-62-like [Nelumbo nucifera]	[more]
gi\|1012351337\|gb\|KYP62526.1\|	1.1e-36	49.14	Desiccation-related protein PCC13-62 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G023830.1	Lsi02G023830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31694	FAMILY NOT NAMED	coord: 11..165 score: 1.6
None	No IPR available	PANTHER	PTHR31694:SF4	SUBFAMILY NOT NAMED	coord: 11..165 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi02G023830	Csa7G396330	Cucumber (Chinese Long) v2	culsiB503
Lsi02G023830	CSPI07G17280	Wild cucumber (PI 183967)	cpilsiB517
Lsi02G023830	Cucsa.205760	Cucumber (Gy14) v1	cgylsiB351
Lsi02G023830	CmaCh08G004110	Cucurbita maxima (Rimu)	cmalsiB822
Lsi02G023830	CmoCh08G004050	Cucurbita moschata (Rifu)	cmolsiB809
Lsi02G023830	Cla014672	Watermelon (97103) v1	lsiwmB175
Lsi02G023830	MELO3C016021	Melon (DHL92) v3.5.1	lsimeB192
Lsi02G023830	ClCG09G006070	Watermelon (Charleston Gray)	lsiwcgB159
Lsi02G023830	MELO3C016030.2	Melon (DHL92) v3.6.1	lsimedB201
Lsi02G023830	Cla97C09G168620	Watermelon (97103) v2	lsiwmbB212
Lsi02G023830	Bhi09G000696	Wax gourd	lsiwgoB271
Lsi02G023830	Cp4.1LG17g07060	Cucurbita pepo (Zucchini)	cpelsiB262
Lsi02G023830	CsGy7G015720	Cucumber (Gy14) v2	cgyblsiB472
Lsi02G023830	Carg22145	Silver-seed gourd	carlsiB782
Lsi02G023830	CsaV3_7G029080	Cucumber (Chinese Long) v3	cuclsiB538

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G023830	Melon (DHL92) v3.6.1	lsimedB180
Lsi02G023830	Silver-seed gourd	carlsiB098
Lsi02G023830	Cucumber (Chinese Long) v3	cuclsiB287
Lsi02G023830	Watermelon (97103) v2	lsiwmbB162
Lsi02G023830	Watermelon (97103) v2	lsiwmbB188
Lsi02G023830	Watermelon (97103) v2	lsiwmbB198
Lsi02G023830	Wax gourd	lsiwgoB202
Lsi02G023830	Wax gourd	lsiwgoB218
Lsi02G023830	Bottle gourd (USVL1VR-Ls)	lsilsiB091
Lsi02G023830	Cucumber (Gy14) v1	cgylsiB110
Lsi02G023830	Cucurbita maxima (Rimu)	cmalsiB348
Lsi02G023830	Cucurbita moschata (Rifu)	cmolsiB337
Lsi02G023830	Cucurbita pepo (Zucchini)	cpelsiB113
Lsi02G023830	Cucurbita pepo (Zucchini)	cpelsiB705
Lsi02G023830	Wild cucumber (PI 183967)	cpilsiB266
Lsi02G023830	Cucumber (Chinese Long) v2	culsiB178
Lsi02G023830	Cucumber (Chinese Long) v2	culsiB267
Lsi02G023830	Melon (DHL92) v3.5.1	lsimeB226
Lsi02G023830	Watermelon (97103) v1	lsiwmB178
Lsi02G023830	Watermelon (97103) v1	lsiwmB226