Lsi02G022260 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCATGGACGGGGTGGAGACGGGGGCAGTGGCGGAGGTTCCGGTGATAGATCTAAGCGGCGGTAGGAGGAGGGAAGAGGTGGTGAGAGAGATTAAGGAGGCATGTGAGAAGTGGGGGCTATTTCAGATGGTGAACCATGGGATTCCAAATGGGGTGATGGAGAAGGTTTTTGAAGCCATTGTAGAGTTCCATGAGCAACCAAAGGAAGAGAAGATGAAGTGGTACTCAAGGGATCCTTCACAAAAGGTTAAGTTTTATTGTAATGGAAATCTTCTAATTTCAAAGGCAGCAAGTTGGAGAGACTCCATATCTTTTGACTTTCAAGATGGCCCTCTCACCACTCAGGCATATCCTCCAACATGCAGGTGATGATCAAAATTTGCTTTAATTATCATTTTTTTTTTCTAATTTTTAAAAATATTTGGTGCATCTCCGACTGCATCCATCTTAATTCTTTGTAGCTCACTTAATTGTCAACTTTAGTTTGCTATAAATTTTTCTCTTTTTTTTTTTAAATTTTTTAACTGCAAAAAGATTAGTGCAACTTAAAATTATGTTAGGCACCCTTCGACTAGACTGATCATTCAATTAATATCACATCTAAATTTAATTCCTAAGATAAATTTAAAGAGTAGCATTTTATTATCCCATAACAGGTTGACTTTGTATGTATATATGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTCTTTTTTAGTATTGTTGTGGATTATGATATGTTGGTCTTTTCAACATTAATATTCAATCACATTTTTATTTTTGAAATAGTTTTTAAATAATAATGAAAAGTTAGTTTGGATATATCCAACTTTCTTCAAACAAATCTTACTTTTTCTTTTTCTTTCTTCAACTACTTTTTCTTTTTAAGTTATTCTTGCTAAGATTGCAAAATTCTTTAAGAAGTTAAATAGAAAAGTGAAAAGATATGGTAAAAAGAGCTTTTTTTTAGAAAATGAAAAAAAAATTGAAAATATATGTCTGTATAATTTATATTTAGTAAATAAGATCTTCTAATTAATAATATTTAGAACTTTTTTCTTGCCTACAATAAAATAGGAAAGAGAAATATTTCGAATTAGAGACAACTTTATCAATAACACATACAATTTATATTATTTATATTAGCTGAACACTTTAAATTAAACTTACTTTTGGCTATAAAATTACAAACAACATATTAAGTATTATAACATTGGAGTGCTTACTAATTGGTAAAAATTAAGTTATAAGAACAATTTGTTTTTTCCCCTATTTAGAATGAATTTTTTTGTTTATTGTATTATAGAATTTAAACTCCTAGGTATAAATAATCATTTTAGTTTTCTTAACTAACTCTTGAATAAATTATGTAACAAAAACCTCTATATATATATATATATATATTAAAATAATTTAAAAGCAACCCTTCAAATAAACATTTAAAAGTTTAAGACCAAAAAATTAAAAATAAATAAATATAAATGTTTATATGTATTGAATATTTAAACATAAAAATTACATTAAATTATAAATTTGGTCCTTATGATTTGGAATGAAATTACAATTTAGTCCCTATAGTTTTAAAAGTTGGAATTTAGTCTTCAAGGTTTGTATAAAACTTCATTCTCATTAGTTTGATAAATCCTCATAAACAGTCTTTGTCATAGAAACTATTAATTATCTAATTATAGGAACTAAATTTTAACTTTCTCCAAATGATAACAACTAAATTCGCAATTTAACCTAAAAGTTATGACGAATTGAAAAAAATATAGGAAAAAAAAAGTCAAAACATAAAAGAAGTAGGTAAAATGAAAGATACTTCAATGAATTACTTATCATTGATTAAGTCATTAATGGTAATTTTAATGTTAAGAGTTTGAAACTTAAAAAATGAACTAAAAATTTGAGAAAGTGAAATCAAATTGGCAATGTACCCTACAAAAATTAGGTGAAAAGAAGAAATAAATGATAGATATGAGATTTTTCTTGTTCCTTTTTCCAAACATATAATAGATTTTGAAAAGAGATTTCAGTCATTATAGGACAATATATATCAATTCAAAACAGCTGTCAAAGGCACATTTTTAGGACAAAAGGGTGATACAATAAAGCCTCCTATTTTTATTACATTTCTAACCATTCAAATTATTTTTTAATGAATAGCAATTTTAGGAATAATAACCAACTTTATAACAACCATTTTAAAAAATTTCAAATATAGCAAAGTCTATCCGTGATAAACGTCTATTGCTGATAAACTCTTATGGTCTATCAGTGATAGACCATCTAAACCATAAAAATCTATCAGCAATAAAAGTCTATCACTGATAAATTTTGCTAGATTTTGTAATTTTTTTTTAAAATGTTGCTGTGTATGTTAATACTTTGAATCTGATTGTTATATTTGCAATAGTAGACTTTTTTTTAAATCATATACAAGATTTCTTTTTTTCCTTTTTTCTTTTTTCTTTTTCCATGTGAGAGGCATATATATGTTTTTTTTTTCAATTTGATCCTTCATCTTTTAAATTTCTCAAATATTTTTCCTAATGTATTAAAAGTTCTCAACCAAGCCCTTTTAGACGAAAACATGTTAATATTTGTAAATAGAAGGTAGTTGGTTAATCTTTTTTTTTTTTTTCTTTTAATATATATTCTGATACATAGGCATGTCATTTTGGACAAAATTAATTTTATTAATGAGTATGTCACATTTTTTTAATTATTGAATTTGGCTTCATGTGTCAACAAATATATGCTAACAAAACAATAATTTAATATTGCATCATCAATATTTATAAGAATTTTATCAAGTTTTATAATGACTTAACTGAAAAAAAAAATTTATATATCAGAAATATAATTGAGAATTTTAAAAGATTAAAAATACACACCACTTTAAAAAGATTAAGAACCATTTTGGTAAATTAATATACTAAATGGTTCTTAATCTTTTAAATATTTAACCTTTATTTAATAACTTGTTATACATATAAGTACAAACAACATTATGCAATAAAATGAGGATACTAGGATAAGTAAAATTTTAAGAGAGAATTTCTTTTTCCTAGGATTTGAAGTTTCATCTCGAATAAGGATACAAATATCTTAACTACTCAATTATATATGTTCATATTCTTAAAAGATTAATCTTTTATTTTAATATAAAGAAAATGTTCACCCTTTTTTTTTCTTTTTCTTTTTTTATAATATGTGGTGGAAATGAAGAATTAAACCTCTGACTTCGAGTTTGATAGTACAAGCATTATATGAATTGAGCTATGCTCATTTTAGCAATGTTTAGTCTTTTATCATCTTACTAAAACTATAAAAATATTATAATAAATTATGGATGGTACGTAATTAAGTTTATCTTATTGCACTAAGATAGAGTTTTTAAAAGTTTAAATAAAGACATGAAAGAAAAACATTCAAATCAAATGTAACTTTTATAAAATAAAATTATATAAAATAAATTTAACAAAAAAACATGTATTTGGTAAAGTGACAGCATAGTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTATAAATAATATAGGATTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTGATAAATAATATAGGATTTGGAGTTTAAGAAAGTAAAATTTCTTGTTAATATTTTGGTATATTTATAAATAAGTTGGTTTATTTTATTATATTTAATAATGGCTCGAAAAAAAATTTAAATCCACCAAGAAGCACTATCGGTTGAAAATTGGCTTCTTTGAAAATGCCAAACGAAAAAAATGCAAAATATGTGCGTCAAGGTTATCCGATCCCATATATCTTTTAGGATAATTTAATAATATTTTTTCTTTGATGTTTGTGTTATTTATTAAATTATTGTTCTCAGAATTTTAATTTCAATGCTAAAGGTCAAAATTTATTATCAACATAATTAGGAGACATCAAATTGAGTTTAATTTAGTGAAATAGATATTATAAAGGATCCACTATTAAATTCACATTTTGTTTTAGATTTATATGAATTGATTACATAAATAATGAAATTAAACTTCTAATAGATTAAATAGCTAAGTTTAGGTTTCTTTTCTAATTCACAAGTGTTCAAACCACCATGAGCGTTTGATTAACCTCACAAGACAATTCATCTGACCTTATAATATTTGAGACACCATAAATCTAAGTTTAACATTATTTTAAAAGGAATGAAAGCTTCTTTCTCAAAATTTTACAGATATTCAAAACCTAACCGTACAGATGCTATCAAAAGTGACAAACTCATTCTAAAAGCAAAAACGCCTTCAACGTGAACCCTGCAACGTACACGTGACTCGAGAGGATAACAAATTACAAATTATGTTATGGTAGGACGTGTGAATATTAGCAACATATATGACTATATAAGGACAGTATCACAGTAATGTGCAGTTGAGGAAGCAAGGGTTTTTTCTTTTTTTTTTTTAATATATATATCTTTTTTCAATATTTTGACAGAGAGGCAGTGAGTGAATACATGGAGCACATGAAAGAGCTAAGAGATAAGATATCAGAGTTGCTATCAGAGGCACTGGGGCTCAATACTGATTACCTTGCAGGATTAGAATGTATGAAATCTGAAAATCTTGTGTGTCACTATTACCCAACCTGTCCTCAACCAGAGCTCACTTTGGGCACAATCAAGCACTCAGATCCATCTGCTTTGACAATTCTCCTCCAAGACAACACTGGTGGCCTCCAAGTCCTCCATCAAAATAAATGGGTCCATGTTTCTCCTCTCCCCGGCGCGCTACTCACCAACATCGGTGACCTTCTACAGGTGTGCAGACATTCTATCCATATCTACATAGGCACACATCAGTTTAGTTATCGATAAGTTGAAAAATGACGAAAAGCTAACTTGATGTTAACATGATGTGACACTCACCTCTAAACATTGATTAACCGTCACGTCAGACATTCACTTGATGTCATATCAGCTTTTCGTTACTATTTCAACTAGATAACCAATATAGAAGATTAAATGGGTATGTTTTACCATAATTCAACAAATAAATAAATAGAAAATGACATAACTTTGATGCTATCTTGTATAAAATTCTGCAGTTAATCACCAATGACAAGATCAAGAGTGTAGAGCATAGGGTGTTGGCAAGGAGCAATGGGAAGAGAGTATCAGCAGCATGCTTCTTTTATCCAAGTGCAAAAAATAGACTTACACCTTATGGACCAGCAAAAGAGTTTCAATCTGAAGACAACCCACCCATATACAGACCCACTAATATCAATGAATATCTTAGCCACTATATACTGAAGGGGTTAGATGGTCATTCAGCCCTACCACATTTTAAAATATGACAACCTCATTTACCACAGAGAGCAATAAGATGGAACTATTAG AGCATGGACGGGGTGGAGACGGGGGCAGTGGCGGAGGTTCCGGTGATAGATCTAAGCGGCGGTAGGAGGAGGGAAGAGGTGGTGAGAGAGATTAAGGAGGCATGTGAGAAGTGGGGGCTATTTCAGATGGTGAACCATGGGATTCCAAATGGGGTGATGGAGAAGGTTTTTGAAGCCATTGTAGAGTTCCATGAGCAACCAAAGGAAGAGAAGATGAAGTGGTACTCAAGGGATCCTTCACAAAAGGTTAAGTTTTATTGTAATGGAAATCTTCTAATTTCAAAGGCAGCAAGAATGAAAGCTTCTTTCTCAAAATTTTACAGATATTCAAAACCTAACCGTACAGATGCTATCAAAAGTGACAAACTCATTCTAAAAGCAAAAACGCCTTCAACAGAGGCAGTGAGTGAATACATGGAGCACATGAAAGAGCTAAGAGATAAGATATCAGAGTTGCTATCAGAGGCACTGGGGCTCAATACTGATTACCTTGCAGGATTAGAATGTATGAAATCTGAAAATCTTGTGTGTCACTATTACCCAACCTGTCCTCAACCAGAGCTCACTTTGGGCACAATCAAGCACTCAGATCCATCTGCTTTGACAATTCTCCTCCAAGACAACACTGGTGGCCTCCAAGTCCTCCATCAAAATAAATGGGTCCATGTTTCTCCTCTCCCCGGCGCGCTACTCACCAACATCGGTGACCTTCTACAGTTAATCACCAATGACAAGATCAAGAGTGTAGAGCATAGGGTGTTGGCAAGGAGCAATGGGAAGAGAGTATCAGCAGCATGCTTCTTTTATCCAAGTGCAAAAAATAGACTTACACCTTATGGACCAGCAAAAGAGTTTCAATCTGAAGACAACCCACCCATATACAGACCCACTAATATCAATGAATATCTTAGCCACTATATACTGAAGGGGTTAGATGGTCATTCAGCCCTACCACATTTTAAAATATGACAACCTCATTTACCACAGAGAGCAATAAGATGGAACTATTAG AGCATGGACGGGGTGGAGACGGGGGCAGTGGCGGAGGTTCCGGTGATAGATCTAAGCGGCGGTAGGAGGAGGGAAGAGGTGGTGAGAGAGATTAAGGAGGCATGTGAGAAGTGGGGGCTATTTCAGATGGTGAACCATGGGATTCCAAATGGGGTGATGGAGAAGGTTTTTGAAGCCATTGTAGAGTTCCATGAGCAACCAAAGGAAGAGAAGATGAAGTGGTACTCAAGGGATCCTTCACAAAAGGTTAAGTTTTATTGTAATGGAAATCTTCTAATTTCAAAGGCAGCAAGAATGAAAGCTTCTTTCTCAAAATTTTACAGATATTCAAAACCTAACCGTACAGATGCTATCAAAAGTGACAAACTCATTCTAAAAGCAAAAACGCCTTCAACAGAGGCAGTGAGTGAATACATGGAGCACATGAAAGAGCTAAGAGATAAGATATCAGAGTTGCTATCAGAGGCACTGGGGCTCAATACTGATTACCTTGCAGGATTAGAATGTATGAAATCTGAAAATCTTGTGTGTCACTATTACCCAACCTGTCCTCAACCAGAGCTCACTTTGGGCACAATCAAGCACTCAGATCCATCTGCTTTGACAATTCTCCTCCAAGACAACACTGGTGGCCTCCAAGTCCTCCATCAAAATAAATGGGTCCATGTTTCTCCTCTCCCCGGCGCGCTACTCACCAACATCGGTGACCTTCTACAGTTAATCACCAATGACAAGATCAAGAGTGTAGAGCATAGGGTGTTGGCAAGGAGCAATGGGAAGAGAGTATCAGCAGCATGCTTCTTTTATCCAAGTGCAAAAAATAGACTTACACCTTATGGACCAGCAAAAGAGTTTCAATCTGAAGACAACCCACCCATATACAGACCCACTAATATCAATGAATATCTTAGCCACTATATACTGAAGGGGTTAGATGGTCATTCAGCCCTACCACATTTTAAAATATGA SMDGVETGAVAEVPVIDLSGGRRREEVVREIKEACEKWGLFQMVNHGIPNGVMEKVFEAIVEFHEQPKEEKMKWYSRDPSQKVKFYCNGNLLISKAARMKASFSKFYRYSKPNRTDAIKSDKLILKAKTPSTEAVSEYMEHMKELRDKISELLSEALGLNTDYLAGLECMKSENLVCHYYPTCPQPELTLGTIKHSDPSALTILLQDNTGGLQVLHQNKWVHVSPLPGALLTNIGDLLQLITNDKIKSVEHRVLARSNGKRVSAACFFYPSAKNRLTPYGPAKEFQSEDNPPIYRPTNINEYLSHYILKGLDGHSALPHFKI
BLAST of Lsi02G022260 vs. Swiss-Prot
Match: ACCH7_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 7 OS=Arabidopsis thaliana GN=At1g04380 PE=1 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 2.4e-77 Identity = 151/311 (48.55%), Postives = 194/311 (62.38%), Query Frame = 1
BLAST of Lsi02G022260 vs. Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 1.2e-76 Identity = 157/316 (49.68%), Postives = 193/316 (61.08%), Query Frame = 1
BLAST of Lsi02G022260 vs. Swiss-Prot
Match: ACH11_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 11 OS=Arabidopsis thaliana GN=At5g59530 PE=2 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 3.2e-74 Identity = 149/317 (47.00%), Postives = 194/317 (61.20%), Query Frame = 1
BLAST of Lsi02G022260 vs. Swiss-Prot
Match: ACCH6_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 6 OS=Arabidopsis thaliana GN=At1g04350 PE=2 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 4.2e-74 Identity = 146/313 (46.65%), Postives = 199/313 (63.58%), Query Frame = 1
BLAST of Lsi02G022260 vs. Swiss-Prot
Match: ACH12_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 12 OS=Arabidopsis thaliana GN=At5g59540 PE=2 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 4.3e-71 Identity = 144/318 (45.28%), Postives = 192/318 (60.38%), Query Frame = 1
BLAST of Lsi02G022260 vs. TrEMBL
Match: W9SXM0_9ROSA (1-aminocyclopropane-1-carboxylate oxidase-1-like protein OS=Morus notabilis GN=L484_009782 PE=3 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 2.4e-108 Identity = 198/313 (63.26%), Postives = 234/313 (74.76%), Query Frame = 1
BLAST of Lsi02G022260 vs. TrEMBL
Match: M5VZC0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017188mg PE=3 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 3.1e-100 Identity = 189/316 (59.81%), Postives = 233/316 (73.73%), Query Frame = 1
BLAST of Lsi02G022260 vs. TrEMBL
Match: A5AYM1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026363 PE=3 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 1.9e-97 Identity = 181/320 (56.56%), Postives = 233/320 (72.81%), Query Frame = 1
BLAST of Lsi02G022260 vs. TrEMBL
Match: D7U2X5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g03060 PE=3 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 7.1e-97 Identity = 181/320 (56.56%), Postives = 232/320 (72.50%), Query Frame = 1
BLAST of Lsi02G022260 vs. TrEMBL
Match: A0A151S8W3_CAJCA (1-aminocyclopropane-1-carboxylate oxidase isogeny 1 OS=Cajanus cajan GN=KK1_026990 PE=3 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 1.3e-95 Identity = 181/315 (57.46%), Postives = 221/315 (70.16%), Query Frame = 1
BLAST of Lsi02G022260 vs. TAIR10
Match: AT1G04380.1 (AT1G04380.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 290.4 bits (742), Expect = 1.3e-78 Identity = 151/311 (48.55%), Postives = 194/311 (62.38%), Query Frame = 1
BLAST of Lsi02G022260 vs. TAIR10
Match: AT1G06620.1 (AT1G06620.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 288.1 bits (736), Expect = 6.6e-78 Identity = 157/316 (49.68%), Postives = 193/316 (61.08%), Query Frame = 1
BLAST of Lsi02G022260 vs. TAIR10
Match: AT5G59530.1 (AT5G59530.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 280.0 bits (715), Expect = 1.8e-75 Identity = 149/317 (47.00%), Postives = 194/317 (61.20%), Query Frame = 1
BLAST of Lsi02G022260 vs. TAIR10
Match: AT1G04350.1 (AT1G04350.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 279.6 bits (714), Expect = 2.4e-75 Identity = 146/313 (46.65%), Postives = 199/313 (63.58%), Query Frame = 1
BLAST of Lsi02G022260 vs. TAIR10
Match: AT5G59540.1 (AT5G59540.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 269.6 bits (688), Expect = 2.4e-72 Identity = 144/318 (45.28%), Postives = 192/318 (60.38%), Query Frame = 1
BLAST of Lsi02G022260 vs. NCBI nr
Match: gi|703158091|ref|XP_010111898.1| (1-aminocyclopropane-1-carboxylate oxidase-1-like protein [Morus notabilis]) HSP 1 Score: 400.2 bits (1027), Expect = 3.4e-108 Identity = 198/313 (63.26%), Postives = 234/313 (74.76%), Query Frame = 1
BLAST of Lsi02G022260 vs. NCBI nr
Match: gi|1009147571|ref|XP_015891482.1| (PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Ziziphus jujuba]) HSP 1 Score: 382.5 bits (981), Expect = 7.3e-103 Identity = 193/312 (61.86%), Postives = 230/312 (73.72%), Query Frame = 1
BLAST of Lsi02G022260 vs. NCBI nr
Match: gi|657981708|ref|XP_008382881.1| (PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Malus domestica]) HSP 1 Score: 377.9 bits (969), Expect = 1.8e-101 Identity = 187/314 (59.55%), Postives = 230/314 (73.25%), Query Frame = 1
BLAST of Lsi02G022260 vs. NCBI nr
Match: gi|470107171|ref|XP_004289923.1| (PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 377.5 bits (968), Expect = 2.4e-101 Identity = 189/325 (58.15%), Postives = 234/325 (72.00%), Query Frame = 1
BLAST of Lsi02G022260 vs. NCBI nr
Match: gi|694387509|ref|XP_009369501.1| (PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Pyrus x bretschneideri]) HSP 1 Score: 376.7 bits (966), Expect = 4.0e-101 Identity = 185/314 (58.92%), Postives = 230/314 (73.25%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|