Lsi02G019160 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTGTCCCAAATTTCTACAGCTTCTCTTACATTTCTTCTTTCCTTTCCCCCTTTTTCGCTTCAAAATAAATTCCATTTTTTTCTTTCTTTCTTTGTCACTTTGAACTCTTCTGGACTCTACAACCCATTTCTCATTCCCAACTACACCCATTCTTCTATGCTTCTTCCTTGATTTCTTCAAACCCAATTAATTGTATCCAAAGTAACACCAAGGTCTTTCTTTCTCTTTTTCTCTAACAACTTGGATTGATTTTGAAGCCATATCCACATCTTTGTACCCTTTGATTGCTTTTACAGTAAGTAATTTACTCCATTTCTTTGAATTCATCTTTTTCTTCTTTCTTTTGTTTTGAAATTGGGTTTTTCTTGATGTTTCTTGGCACTGAGGCTGATGGGTCGGATTTGGTTTTGATAATTATGCTGGGGATTTTTAGTTAATTTGCTAATATTCAAATCTGAAAGTGAATTAGTGTTTCTTTTCCTAAGATTTTCTGGTTGAGCTTTCTGATGGAATGGTGTTGTATTGATGGGGTGGAGTTTTTTCTTTTGCATTTGGGTTTTCTTGGGTTTCTTGGAATTTGATAACCTTTAAATTCATTTTTTTCTTGGTGAAGAATGGTAGTTGAAGATCTATTTGTTGTTTTTTTGTCTGCTGAGTTTCTTTTATCTTCATCTGGTTTGGAAGATTAATTATGTCTTTATTCTTGGCTACTTCAGGTTATTTGGTACTCCGGATCATATTATTAGATGGGTATCAGATTTCTTTTAATAGGTTGTTTGGATTGTGGGTGTTAAAGCATTTTGAAAAGTTGCTTTCTGCATGCAATCTTTTAGAGGTTTTTGGTTCAGGGCTTGTAATGAACCGTCTATCTTAATTATTGATTAGTTTACAATCACTTAAATGTGGTTTCCGAATCACAAGGACAAATTGTACTGACAATGATGTTATTTTGTCTTAGATTGGTGTAGGAGAGGCTGTTCTTGAGTGAAATTAAAGGAGTTTGGTGTGTAGTATGTGCCATTATTGTGGTGCTGTGATAACAGATTCAGATGGCAAAAAATTGGAGAATGGTAGTTCTCTTAAATTAGATGATGCAGGCCCCATGTGTTTATGTAAAGCTTGCAAAGAGAATCAGGAACAAGAAATGATGAAGTCGGATAAAAGAAGTACGAGTGAAGCACCGATGTTAAGTCCAATGCCTTCGCTATCAAGCTGCAATAGTTGGGTTTCAGCCAAATATACTTCTTTCAAGTGTTTCTATACTTTTATTTTTCACCCTGAATCCTGATCCTCACGATTTAATGCCTTTATCTTCTCTTTTTCATCAGGTGATTGTTCAACAGTGGCAAATTTAGATATCAGGTAAGATAGCTTACTAAGGAAACTTTTTTAGTCAACAACCACTTTTTTCTTATAGTCATTGGCTTCGTTTTATTTTGTTAGGGATGGCCAAGAAGGTGCAACAGGAAGTAGCCAAGAAGATATCGATTGTAGGCAAGAACGGATGGCACATAACTTGAGTGAAGTAGTTCATAGCAATGATCAACTCAGTGGAAGAGATGATGAAAGTGTAATGTCAATTAGTCAAGAGGCAACTTACAACGGCTCTGGTGTTCCTGTCAATGCGGAGATTGAGCAATCCCATTCTAATTGGATGGATACTGATCTGTGGGATCCTCCAGAGCCAGAGGACCCAGAGGATCACATGGAGGGTGGGATGGGTTATAACGACGACGACGACGAGGAGTTTGGTGATAGCACAGAATGGAGCACCTCGAGTTCCTTTAGTCGCTCTGTGGATGAAGCCAGTGTTAGCCATAGGTTTAAAGAGGAAAAACAAAGGGCAATGCAACAGGTTATGAATGGGAAGTACAAGGATTTCATACGCCATCTTCTTAAATTAGTAGGTGTCGCCGCCTCATCAGGGGAGGATAGTGAAAATTGGGTGGAGATAGTTTCTTCTTTGTCTTGGGAAGCTGCCACATTTTTAAAGCCTGTAGTAAACGGTAAAGCGATGAATCCAGAAGAACATGTAAAAGTGAAGTGCATTGCAACTGGAACTCGCAACCAAAGGTAATTTACTAAACTACGTTATGTTGTCTGCAAACTTAACATAGGGAGGTATCGATACTTTTACTTAACAGTAGTTATGATATATCTACTGCATTAGCCAATGCTTTGTGGCTTCTTGGCCGGCCTTGCTCCTTTCCGATGGTGGTTGAGGACTTT ATTGTCCCAAATTTCTACAGCTTCTCTTACATTTCTTCTTTCCTTTCCCCCTTTTTCGCTTCAAAATAAATTCCATTTTTTTCTTTCTTTCTTTGTCACTTTGAACTCTTCTGGACTCTACAACCCATTTCTCATTCCCAACTACACCCATTCTTCTATGCTTCTTCCTTGATTTCTTCAAACCCAATTAATTGTATCCAAAGTAACACCAAGGTCTTTCTTTCTCTTTTTCTCTAACAACTTGGATTGATTTTGAAGCCATATCCACATCTTTGTACCCTTTGATTGCTTTTACAATTGGTGTAGGAGAGGCTGTTCTTGAGTGAAATTAAAGGAGTTTGGTGTGTAGTATGTGCCATTATTGTGGTGCTGTGATAACAGATTCAGATGGCAAAAAATTGGAGAATGGTAGTTCTCTTAAATTAGATGATGCAGGCCCCATGTGTTTATGTAAAGCTTGCAAAGAGAATCAGGAACAAGAAATGATGAAGTCGGATAAAAGAAGTACGAGTGAAGCACCGATGTTAAGTCCAATGCCTTCGCTATCAAGCTGCAATAGTGATTGTTCAACAGTGGCAAATTTAGATATCAGGGATGGCCAAGAAGGTGCAACAGGAAGTAGCCAAGAAGATATCGATTGTAGGCAAGAACGGATGGCACATAACTTGAGTGAAGTAGTTCATAGCAATGATCAACTCAGTGGAAGAGATGATGAAAGTGTAATGTCAATTAGTCAAGAGGCAACTTACAACGGCTCTGGTGTTCCTGTCAATGCGGAGATTGAGCAATCCCATTCTAATTGGATGGATACTGATCTGTGGGATCCTCCAGAGCCAGAGGACCCAGAGGATCACATGGAGGGTGGGATGGGTTATAACGACGACGACGACGAGGAGTTTGGTGATAGCACAGAATGGAGCACCTCGAGTTCCTTTAGTCGCTCTGTGGATGAAGCCAGTGTTAGCCATAGGTTTAAAGAGGAAAAACAAAGGGCAATGCAACAGGTTATGAATGGGAAGTACAAGGATTTCATACGCCATCTTCTTAAATTAGTAGGTGTCGCCGCCTCATCAGGGGAGGATAGTGAAAATTGGGTGGAGATAGTTTCTTCTTTGTCTTGGGAAGCTGCCACATTTTTAAAGCCTGTAGTAAACGGTAAAGCGATGAATCCAGAAGAACATGTAAAAGTGAAGTGCATTGCAACTGGAACTCGCAACCAAAGTTATGATATATCTACTGCATTAGCCAATGCTTTGTGGCTTCTTGGCCGGCCTTGCTCCTTTCCGATGGTGGTTGAGGACTTT ATGTGCCATTATTGTGGTGCTGTGATAACAGATTCAGATGGCAAAAAATTGGAGAATGGTAGTTCTCTTAAATTAGATGATGCAGGCCCCATGTGTTTATGTAAAGCTTGCAAAGAGAATCAGGAACAAGAAATGATGAAGTCGGATAAAAGAAGTACGAGTGAAGCACCGATGTTAAGTCCAATGCCTTCGCTATCAAGCTGCAATAGTGATTGTTCAACAGTGGCAAATTTAGATATCAGGGATGGCCAAGAAGGTGCAACAGGAAGTAGCCAAGAAGATATCGATTGTAGGCAAGAACGGATGGCACATAACTTGAGTGAAGTAGTTCATAGCAATGATCAACTCAGTGGAAGAGATGATGAAAGTGTAATGTCAATTAGTCAAGAGGCAACTTACAACGGCTCTGGTGTTCCTGTCAATGCGGAGATTGAGCAATCCCATTCTAATTGGATGGATACTGATCTGTGGGATCCTCCAGAGCCAGAGGACCCAGAGGATCACATGGAGGGTGGGATGGGTTATAACGACGACGACGACGAGGAGTTTGGTGATAGCACAGAATGGAGCACCTCGAGTTCCTTTAGTCGCTCTGTGGATGAAGCCAGTGTTAGCCATAGGTTTAAAGAGGAAAAACAAAGGGCAATGCAACAGGTTATGAATGGGAAGTACAAGGATTTCATACGCCATCTTCTTAAATTAGTAGGTGTCGCCGCCTCATCAGGGGAGGATAGTGAAAATTGGGTGGAGATAGTTTCTTCTTTGTCTTGGGAAGCTGCCACATTTTTAAAGCCTGTAGTAAACGGTAAAGCGATGAATCCAGAAGAACATGTAAAAGTGAAGTGCATTGCAACTGGAACTCGCAACCAAAGTTATGATATATCTACTGCATTAGCCAATGCTTTGTGGCTTCTTGGCCGGCCTTGCTCCTTTCCGATGGTGGTTGAGGACTTT MCHYCGAVITDSDGKKLENGSSLKLDDAGPMCLCKACKENQEQEMMKSDKRSTSEAPMLSPMPSLSSCNSDCSTVANLDIRDGQEGATGSSQEDIDCRQERMAHNLSEVVHSNDQLSGRDDESVMSISQEATYNGSGVPVNAEIEQSHSNWMDTDLWDPPEPEDPEDHMEGGMGYNDDDDEEFGDSTEWSTSSSFSRSVDEASVSHRFKEEKQRAMQQVMNGKYKDFIRHLLKLVGVAASSGEDSENWVEIVSSLSWEAATFLKPVVNGKAMNPEEHVKVKCIATGTRNQSYDISTALANALWLLGRPCSFPMVVEDF
BLAST of Lsi02G019160 vs. Swiss-Prot
Match: FAB1D_ARATH (Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana GN=FAB1D PE=3 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 8.2e-22 Identity = 75/236 (31.78%), Postives = 123/236 (52.12%), Query Frame = 1
BLAST of Lsi02G019160 vs. Swiss-Prot
Match: FAB1B_ARATH (1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana GN=FAB1B PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 3.0e-16 Identity = 56/140 (40.00%), Postives = 83/140 (59.29%), Query Frame = 1
BLAST of Lsi02G019160 vs. Swiss-Prot
Match: FAB1C_ARATH (Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana GN=FAB1C PE=2 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.1e-15 Identity = 48/138 (34.78%), Postives = 82/138 (59.42%), Query Frame = 1
BLAST of Lsi02G019160 vs. Swiss-Prot
Match: FAB1A_ARATH (1-phosphatidylinositol-3-phosphate 5-kinase FAB1A OS=Arabidopsis thaliana GN=FAB1A PE=2 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 6.3e-14 Identity = 50/137 (36.50%), Postives = 76/137 (55.47%), Query Frame = 1
BLAST of Lsi02G019160 vs. TrEMBL
Match: A0A0A0K755_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G206930 PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 1.0e-79 Identity = 156/190 (82.11%), Postives = 170/190 (89.47%), Query Frame = 1
BLAST of Lsi02G019160 vs. TrEMBL
Match: A0A067GZ47_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g000298mg PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 5.3e-52 Identity = 146/331 (44.11%), Postives = 197/331 (59.52%), Query Frame = 1
BLAST of Lsi02G019160 vs. TrEMBL
Match: A0A067GW56_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g000298mg PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 5.3e-52 Identity = 146/331 (44.11%), Postives = 197/331 (59.52%), Query Frame = 1
BLAST of Lsi02G019160 vs. TrEMBL
Match: V4T8Q6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000021mg PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 5.3e-52 Identity = 146/331 (44.11%), Postives = 197/331 (59.52%), Query Frame = 1
BLAST of Lsi02G019160 vs. TrEMBL
Match: A0A067GWH4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g000298mg PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 5.3e-52 Identity = 146/331 (44.11%), Postives = 197/331 (59.52%), Query Frame = 1
BLAST of Lsi02G019160 vs. TAIR10
Match: AT1G34260.1 (AT1G34260.1 FORMS APLOID AND BINUCLEATE CELLS 1A) HSP 1 Score: 105.9 bits (263), Expect = 4.6e-23 Identity = 75/236 (31.78%), Postives = 123/236 (52.12%), Query Frame = 1
BLAST of Lsi02G019160 vs. TAIR10
Match: AT3G14270.1 (AT3G14270.1 phosphatidylinositol-4-phosphate 5-kinase family protein) HSP 1 Score: 87.4 bits (215), Expect = 1.7e-17 Identity = 56/140 (40.00%), Postives = 83/140 (59.29%), Query Frame = 1
BLAST of Lsi02G019160 vs. TAIR10
Match: AT1G71010.1 (AT1G71010.1 FORMS APLOID AND BINUCLEATE CELLS 1C) HSP 1 Score: 85.5 bits (210), Expect = 6.5e-17 Identity = 48/138 (34.78%), Postives = 82/138 (59.42%), Query Frame = 1
BLAST of Lsi02G019160 vs. TAIR10
Match: AT4G33240.1 (AT4G33240.1 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion binding;1-phosphatidylinositol-3-phosphate 5-kinases) HSP 1 Score: 79.7 bits (195), Expect = 3.5e-15 Identity = 50/137 (36.50%), Postives = 76/137 (55.47%), Query Frame = 1
BLAST of Lsi02G019160 vs. NCBI nr
Match: gi|659131288|ref|XP_008465608.1| (PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D [Cucumis melo]) HSP 1 Score: 502.3 bits (1292), Expect = 6.3e-139 Identity = 252/290 (86.90%), Postives = 268/290 (92.41%), Query Frame = 1
BLAST of Lsi02G019160 vs. NCBI nr
Match: gi|778725591|ref|XP_011658963.1| (PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D [Cucumis sativus]) HSP 1 Score: 476.9 bits (1226), Expect = 2.8e-131 Identity = 241/291 (82.82%), Postives = 262/291 (90.03%), Query Frame = 1
BLAST of Lsi02G019160 vs. NCBI nr
Match: gi|700188909|gb|KGN44142.1| (hypothetical protein Csa_7G206930 [Cucumis sativus]) HSP 1 Score: 305.1 bits (780), Expect = 1.5e-79 Identity = 156/190 (82.11%), Postives = 170/190 (89.47%), Query Frame = 1
BLAST of Lsi02G019160 vs. NCBI nr
Match: gi|694423910|ref|XP_009339742.1| (PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D [Pyrus x bretschneideri]) HSP 1 Score: 224.2 bits (570), Expect = 3.3e-55 Identity = 154/330 (46.67%), Postives = 195/330 (59.09%), Query Frame = 1
BLAST of Lsi02G019160 vs. NCBI nr
Match: gi|694400295|ref|XP_009375246.1| (PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D [Pyrus x bretschneideri]) HSP 1 Score: 222.6 bits (566), Expect = 9.6e-55 Identity = 152/328 (46.34%), Postives = 192/328 (58.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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