Lsi02G017600 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G017600
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Transmembrane emp24 domain-containing protein 10
Location	chr02 : 23316606 .. 23324453 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAATTGTAACACGTGTCGGTCATAGGAGGAAGGAAGGGTACGTGTTTCAGCCAATGGGAATGAAGCAACTGTCAACTACATCAATTTAATTTTACATTTTTTTTTCCGAAACAAACCTTCTTGTTTGTTAATGTAAATTTGTAAATTTGTAATTGTGTAATAATTATAATTTTGATTTGGCGTTTTAGATATTAGTTGGCCGCCGTTGAAATCTCTCTGTTTTTCTTTCTTTTTCCTTCAGCAAAACACACAATCCCGAATCTCTCTCTTTCTCTGTTCTCCTACTTACTATTGAAAATTTTCTTCCATTTTTCAAGAATGGTTCGATTCTTCGCCGCTTTTCAGCTCCTACTACTCATTGGATTTCTTTCTTCTCGATCGGAATCTCTTCGATTCGACTTGCAGTCCGGCCACACCAAATGCATCTCTGAGGACATTAAGCAGAACGCCATGACCGTCGGCAAGTATCACGTTGTTAATCCCAACGAAGGCCAGCCCTTGACTGATGATCGCAAGCTCATTGTTCGGGTAGTATTTTTTTTTTTTTTTTTTTTTTGAGGATCTCATGATTTTATTTTTTATTTTGGGGTTTTTGATCGGTGAGTGATGCTTAATTTAGGGTTTTGGAATCTGTAGGTGACTTCAGCTACTGGAAATACTTACCACTACTCCGACAAGGTGGAATCGGGGCAATTTGGGTTTGTTGCTGCGGAGGCGGGTGATTTCATGGCCTGTTTTTGGGCTCCCGATCACCAGCCTCAAGTCACATTATCGGTGGATTTCGATTGGAGGACGGGTGTGGCTGCCAAGGACTGGTCCAATGTTGCTAAGAAGGGCTCTGTCGAAGTAAGTTTTTGCTTGTATATGACAAATCTAGTTTCAATTTCGTTCCGTTCTATGGCTTCTGCTGTTACCTTTTGATAGTTTTGGAGGATTTTGATTGGCGTGTATATTCGAAATTGGAATTCTTTATGAAGCTTTGATTCTCCGGATTTGAGAAATTTACTATTCTTTGCTTGCATTAGTAGTATCCTCCTGCCTTTAGCCATTCTTTCATTGAACAACCTAGAGTTCCTTTCAAGTCGCAAACTCCAAACAAGCGTTGACTTCGTTCAACCAGTCTTTTTGTTATCCTTCTAAATCTGTTACCAGAAATCAATCAGATTATGTTTCTTTTGTGAAATAAGCAAATATCAAGAACAGTTGAACTACTGTAGTGGGGAATTCCAGCAATTTAAATTCAGACTGTTGGAGCAAATATGCAGAAAATAGCCATGTGTAGAGCTGCTGTCTTTCGTTAAATACAGTTAGAATCAAGTTTAAGCATCCTTTTTGAATCCCATCAGCAGTTTAATCTTCTTATGACAGTCTAGTAAAACAAATATACTTTCGTAATCCCCCTCCAAGCAGAAGTTGAAATCACTTTTGCCAAACAAACAAATCTAGTTGTCTCATTCCTAGCTTCCTTCAGTTTGATGTCGTTTGGAACTAGAGGTAGCAAAGATGCAGGGAACCTGTACAGCAAGGCACCTATCTCTCCAACATAATGTCTGAGGCTTCATTTCCCCCCTTAGGATTGTTGAAGGGTTTTGGTCTTGGCATCATTTGACTAGGGATTGTGGTCAATTCTAGATTCCTCTCATTGGTGGAAAAAAAACCCCCAAGTTCTTCTTCCCCTGGATGTTTGTGATTCACTTTGGTACCTCCAAGCTCATTTTGCCAACAAGATTTAGTTCGGGATGTCTTATCATCCTTTTTCCATTAGAATATAAAATATCTTTAAATTAGTAGTTCGACTCAACTTTTTCTTTTGCTTTTGCCACTGAAGTTTTCATTTTTCTCTATAAATTTAGAGCCGTTTTCTTCGTAGTTTGAAAGAAGTCATATAATTAAGTTAGGCAAGTTAGAAAAAGCTGTAGTGGAGATCATGAGATGACATCCCGAACAAAGTTTCCACTCACCAAATTTTATTAGTATTTTTTCTCCTAATGGTACCAACAATCTCATTTTCAAATTTTCTCTTACAAACAAATGCTTACTCTGAACCAATTTTAACAATTCACTTGACAAGGGTTGGGGAGCCCTGGTGCCTTTATTTTTGCTATTAAAGTCCTTACATTGTTTAGAAGATTATGGGTTGCAAGTAAGAGGTATATTTTTATTCACACGACACAAATTGAGTAGAGTTCAAAAGTCTAGAGTGAATAGTACTGTACCAATCAAGAGACATGAGCAATTATTGTGTCCTACAAAGTGAAGCTCTTTTTGGGATCTGGTTTATGATTAAATTAGAGGTGAACTTGAATTGGAGTGATTTTACAATTGCTAAGGGAGGTAGGGTACCTTGATAAATGCACTCCTTCATAGTATTCATTGTTTTTATTTGTCCATTCTCAGAATCCCAATTGCTGTGTGTAAAAATAGAGAAAGTGTTCAGAATTTTTTTGTGGAAGGGCACTGGCAGTAACAAAGAGTGTCACTTAGTTAACTGGGATAAAGTCAAGTCTCCTTGCTCTTTGGAAGGTTTGGGTGTGGAAGATCTTTGCGCAAATAATTTCTCCTTTCTTACCTGGTGTTGTGGTGTTTTGAGCATGAAAAGGATGCTCTGTGGAGGAAAGTTGTCAAGGGCAGATATGTTTTTTTAGCTCTGTGAAAGGTTTCATAACGTACAAAAACTGGAAAGTCTTACAGCCCATGGAAGGAGATTGCAAAGCTTAACATTTTTTTTCTTTTTCTTTTTCTGGCTTAGTATCGGGTATAAGGTGGGCTGGTAGCGAAACTCTTTTTTGGATTGACATTTGGTTAGGGAACCAGCCATTATGGGTGACATTTCCCTTGAATCTCAGAATTTCCGATGCCACTAATACCTCAATTTAACAATGTTGAAACCCTGACGACAGGTAACTAGAATCTAGAGTTGAGAAGAGGCTTGTCCAATAGGAAGTTGGAAGAGTGGGGCTGTCTTGCCTCTTTGTTGGAGGCTACAAGGCCTTCCCTTAGCCAAGACTTGCTGACTTGGTGGTTAGAAAAGAAAGGTAACTTCTTGGTGAGTTTGTGATAGCTCCATAAAAAAGCTATCTTTTCTAGCCTAAATCTTGCTAGTTCAAGAGAATTTGATGTTAAAATGTGCTTAATTGTAGGAAATCGAGCTCGATAGGTTTTTTGGAAAACTAACATGAATTTGACTCGGTCCATTACTAATTATTACAAATATTTAGTCTTAGATGGGTACACTATAAATGTCATTTGGTTGTGGATTTTCGCGACAAAATTTTTGCACAAATTCAACTTCTACCTATTGTAATCTGGTGGATAAATAAAGGCTGTTGAGAAAGGAGGTGTGCATGACAATTTGGGAACAGGTTGCCTCTAAAAGGGTGGAATTTTTCTTATGGTTTGTGGCTCATGGTAGCGTCAATACTTTTGACAAGTTGCAAAAAAGGTTTCCTTATTTTTAGTTATCTCGAAATATGTGTGTTATACATTCATTGGAGAGTCTTTTTGTCTCATCTCCTACATAGTGACTTCAACGGTAGAGTTTGAGATTCTTTTGGAAATTTGTTTTGTCTTAGGTGGTGTAATTCTCATTGCTTAGACAATTGGCTACTGGAGTCCTCAATGGTTGGGGGCTTTGAGATAAAGCAAAGGTGTTATGGTCAAACGTGACTAAAGCTATTTTTGTGATTTATTTGGAAGGAAAGGAATGATAGAATCTTCAAAGATAAGATCAATTCTTTTGTTTATTTTTGTGAGTTTGTGAAGTCCATGACTACTTTTACCTTTAACCTAGGTTGGAAGATGTGTTTGTAATCTCTTCTCGTCAAGGAAGAGACTTTTCGTCCCTTTGTTAGTTAGGTTGTTCTTTTTTATCCCTTTTCTTGGAATGAAATGGTTTCTTGTTTCTCTTAAAAAGAAGCAAAATACACTTCTGGTCGCTGAAGTTTGGGATTGGTGTCTATTTGGTCCCTTAGGCTTCAAAATAGACACTTTTTGTCCTTGAAGTTTGAAGAGTGGTTCTAAATGGTCCCAAAAATGTTTGAAATTTTTAGTCCTTAAGGTCTACAACTCCCCCCTCCTCCTCGTACTATGTCGCATCACCATTCCATGGGATGAATATGTAAGGTATTTCCTTACAATGGTATTGATCAGTGAAAGAAATATGGCCCGAAGGCAGTAACAAGGTTCCTCCCTTCTCTCTCTTGAAGAATACAATCCAAAAACAAGCTACCTCCCCAAAAGACCTAACAATTATTTATATACTCTCTCTCAATAACAGAAACCTCACTCCCATGGCCAATGACCTCCCCCCCCCCCCAACCCCCAATAGCCATGCATACGCCCTCCTCACTTAACATTCTCAGTACTAATTGATTCTCCCCCAATTACCTTCTTACCCTTCCTCTGATATTGAAATACAATTGGTGGTCTAACGTTACCCTTTGCTTCTAAATCCACCTTGTCCTCAAGGTGATACTCAGAAATTTGGCGTAAAAATCCATCAAGCTCTTCCCATGCCACTTCATGTGCTGGTAAGCATTGCCAATTGATCAATGCCTCCCATACTCCAGTAGTAGCATTCTTTCGATATCTATTCACCTCTCAAGAAACTGCAATCCGTTCATACATATCAGAAAAATTAGGAGGGCATGGTTGGACCTCGTGCAGGCGGCCTAAGGCCCCTTAAGCTGGGACACATGGAACACAGGGTGTATAGCCATGCCCTCAGGTAGTTGTAGCTTATAAGCCACAGTTCTGATTCGTGCCATCATCTGATAAGGATCAAAGTACTTAGGAGTAAGCTTTTCATTTTGTTGTTTAGCCAATGTTACTTGGCGATAGGGTCCTAACTTCAAGAAGACCCGATCATTCACTGCAAATTCCAGCACTCAATGTTTTCAATCAGCAAATTTCTTCATACGGTCTTGAGCTCCACACAACAGTTTCTTCATAACGCCCAACACACATCTTTGTCTTGGAGTATTTGATCCAATGGAGAATAAGGAGTCTGAAGTTCTCTATAAGAAATGGAGGTGGTGTTCTACCATACAACACCTAAAAGAGAGTAATACCAATGGATATATGGTAAGTGGTATTATACCAGTATTCCACCAATGCAACCATGATATCCATTGTTTCGGCCTCACTGCAAAAACAACGCAAATATGTTTCAACCCATCCATTGACCACCTGTATTTGGCCTTCAGACTGTGGATGGTACGTTGAGCTGCGATGCAATTGCGTTCCAACCGCTCTAAACATTTCCTTCCAGAAATGGCTCAGAAATACCTTGTCTCTGTTACTGGCAATGGATTTGGGATATCCATGTAATTGAACAATCTCCTTGACAAAAATATCAGCCACAGATTTAGCTATAAACAGGTGTTTAAGTCTCATACAATGAGCATATTTGCTCAACGGTCAACCACTACCAAGATAACATCGCTTGCGACAATCCCTTGATAAAATCCATCAAGATATCATCCCACACCTTCTCGGGTATTTCTAGGGGAAGTAATAATTTGGCTGGAGAAGTAACAAGTGACTTATTGTGTTGGCACACTAGACACTCCTCAACGTACTTTTGAACATCCATTTTCATACCTTCCCAAAACAAGTCACCCGTCAACCTCTTGCAAGTTCTCAAAAATCCGGAATGCCCCCCAAATACTTAGTCATGGTATTTATGCAAAATAGTATGTAATAAATTAGAATACGATGACAACATGTTTGATACTTTCATTCAGACTATTTTTTTTGAATGGTGCTCAAGTAAGAAAGTAAATTGGGAAAAATCTGTTCTTTGTGGAGTTAATGTGAAGGAATCAAAGCTCATTCAATATTCTTCAAGGCTCAATCTCAAGGCTGAATCATTCCGATTGTCTTATTTTGGTCTTCCTCTTGGAGGATATCCTAAGAAGATGCGTTTTTGGCAGCCTGTATAGACAGAATTCAGAAAAAGATTGATTGATGGAAAAGATATAATCTCTTTTGAGGGAGGACGCATGACCTTAATGTAATTCAGTTCTATCATGCATACCTTTATATTATGTTTCCTTATTTCTTTTGCCTTCCATGGTTAGTTTGGAATTGGATACGTGTTGAGGGTTTTTTTCTGGGAAGGTAAGGAAGGCAGTAAAATTAGCCAAGATTCAGAATTGGCGCCTTGAAGCATAGAAATTTGACCCTTATCTTTAAATGGGGTTGTAGGTTATTCAAGAACCCTTTTCCTTTTGGAAATTGCTAGCATTCATGGTTCTGAAGTTTTAGATTTCCAGAATCTGTTAATGCTCGCCTCTTATTTTAAGATTACCTCAAATGAAGATTCTAAAAAATGGTCTCTTGAAGTTGAACCATCGGGCAAGTTCTCAGTGAAGTCATTGACTAGATTTTTGGAGTCTTCCTCTCCTTTGGATGATCTTTTGTTTTCTGCATTGTGGAAGTCTAAATGTCCCAAGAAGACTAACATTCTCATATGGATTATGCTCAAGGGTAATCTTAATTCGGCTGAAATTCTGCGAAGGAAGATTCCTCATTACTCATCAGTGTCTTCTTCCTTCGATTTGTCTTTAATGCTATGAGGCAGGGGAATCTCTCCATCATATATATATTTTTTGAATGTTCTTATGCTTATGTTGGGGCTAGTTTCTCAGTTTATTCAACATTCAATGTGTATTCTCACATAATTTGATAAAATATGTTTCTCAAATTTTGACTGACCCTACACATTTGGCTCCTATGGCAAATCCTCTATGGATCTGCTCTTGTTTTTGAATTATGGTTCAAAAGAAATAAGAGAGTATTCCAAAGTTCTTATCTTTTTTATTGTGAGAGGTTGGATTCAGCTTGTCTTAAACATTCTAGCCGGTGTTCTCTTTCAAAGCTATTTGGCGGTTATTCAATGCAAGATATTTGTTGAGGCGCAGATATTTTTATTTCACCTATTTAGTGTTTTGTTTATATTTGTTGCTGATACTTTTCATTTGGTGTTCTTTTGTGGTTTTCCTTTGTTCCCATTTTTCATTTCTCTATCTCGGTTTGTTATTTTTATCTTTGTACTTTTAGCATTAGTCTCTTTTCATTTCCTTACTGAGAAGTCCTGTATCCTTTTTTAAAAAAAAAAATCAGGGTACTTGAAACAAAAGTAAAGAGGGGAGGAACTGAATTATAATTTCTTGACCGCTTTCATAATTTTGCTTCAATGACACAATGTTGTGCCCGCATGGTCTGCATTTGTCAAGTCTTGGACTCACTGGAATACAAGTTCACTTGAGACTCGATGCATGTTTGTTCTTTCAATTCTAATAAATTGCTGTAATACCTTCTCTGTGTTGTTTTCCCAATCTCATGTTATCATGCCATTAATGATTCACTTACAATGCCAGGTTATGGAATTGGAGCTGCAGAAGTTGTTTGAAACTGCCAATTCTATTCAAGAAGAGATGTATTATCTCCGTGAAAGGTAAAACAGAATAAAGCTCTCTCCCACTCTCTGCCTTCCCAACATATCATAATTCCTTATATAGAAATGTGTTCTACTCCTTTGTCCCCAGTTCATTCTCCTATTTCATGAATTTGTATTACTTGTTCTCTATCCCATTTGACCTCGACCCTATTGTTATGTTTGTCAGCCTTACCCATGATTATTCTCTGTTGGTCTAAAAATTTTGAACAATGTATGATGGCAGGGAGGAAGAGATGCAAGATCTGAACAGAAGTACAAATACAAAGATGGCATGGTTGAGTTTGCTATCGCTTTTTGTTTGCTTATCAGTGGCGGGATTGCAAATATGGCACTTGAAGACCTTTTTTGAGAAAAAGAAGCTCATTTGATTTTTTTTTTTTTTTT

mRNA sequence

TTTAATTGTAACACGTGTCGGTCATAGGAGGAAGGAAGGGTACGTGTTTCAGCCAATGGGAATGAAGCAACTGTCAACTACATCAATTTAATTTTACATTTTTTTTTCCGAAACAAACCTTCTTGTTTGTTAATGTAAATTTGTAAATTTGTAATTGTGTAATAATTATAATTTTGATTTGGCGTTTTAGATATTAGTTGGCCGCCGTTGAAATCTCTCTGTTTTTCTTTCTTTTTCCTTCAGCAAAACACACAATCCCGAATCTCTCTCTTTCTCTGTTCTCCTACTTACTATTGAAAATTTTCTTCCATTTTTCAAGAATGGTTCGATTCTTCGCCGCTTTTCAGCTCCTACTACTCATTGGATTTCTTTCTTCTCGATCGGAATCTCTTCGATTCGACTTGCAGTCCGGCCACACCAAATGCATCTCTGAGGACATTAAGCAGAACGCCATGACCGTCGGCAAGTATCACGTTGTTAATCCCAACGAAGGCCAGCCCTTGACTGATGATCGCAAGCTCATTGTTCGGGTGACTTCAGCTACTGGAAATACTTACCACTACTCCGACAAGGTGGAATCGGGGCAATTTGGGTTTGTTGCTGCGGAGGCGGGTGATTTCATGGCCTGTTTTTGGGCTCCCGATCACCAGCCTCAAGTCACATTATCGGTGGATTTCGATTGGAGGACGGGTGTGGCTGCCAAGGACTGGTCCAATGTTGCTAAGAAGGGCTCTGTCGAAGTTATGGAATTGGAGCTGCAGAAGTTGTTTGAAACTGCCAATTCTATTCAAGAAGAGATGTATTATCTCCGTGAAAGAAATGTGTTCTACTCCTTTGTCCCCAGTTCATTCTCCTATTTCATGAATTTGTATTACTTGTTCTCTATCCCATTTGACCTCGACCCTATTGTTATGTTTGTCAGCCTTACCCATGATTATTCTCTGTTGGGAGGAAGAGATGCAAGATCTGAACAGAAGTACAAATACAAAGATGGCATGGTTGAGTTTGCTATCGCTTTTTGTTTGCTTATCAGTGGCGGGATTGCAAATATGGCACTTGAAGACCTTTTTTGAGAAAAAGAAGCTCATTTGATTTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGGTTCGATTCTTCGCCGCTTTTCAGCTCCTACTACTCATTGGATTTCTTTCTTCTCGATCGGAATCTCTTCGATTCGACTTGCAGTCCGGCCACACCAAATGCATCTCTGAGGACATTAAGCAGAACGCCATGACCGTCGGCAAGTATCACGTTGTTAATCCCAACGAAGGCCAGCCCTTGACTGATGATCGCAAGCTCATTGTTCGGGTGACTTCAGCTACTGGAAATACTTACCACTACTCCGACAAGGTGGAATCGGGGCAATTTGGGTTTGTTGCTGCGGAGGCGGGTGATTTCATGGCCTGTTTTTGGGCTCCCGATCACCAGCCTCAAGTCACATTATCGGTGGATTTCGATTGGAGGACGGGTGTGGCTGCCAAGGACTGGTCCAATGTTGCTAAGAAGGGCTCTGTCGAAGTTATGGAATTGGAGCTGCAGAAGTTGTTTGAAACTGCCAATTCTATTCAAGAAGAGATGTATTATCTCCGTGAAAGAAATGTGTTCTACTCCTTTGTCCCCAGTTCATTCTCCTATTTCATGAATTTGTATTACTTGTTCTCTATCCCATTTGACCTCGACCCTATTGTTATGTTTGTCAGCCTTACCCATGATTATTCTCTGTTGGGAGGAAGAGATGCAAGATCTGAACAGAAGTACAAATACAAAGATGGCATGGTTGAGTTTGCTATCGCTTTTTGTTTGCTTATCAGTGGCGGGATTGCAAATATGGCACTTGAAGACCTTTTTTGA

Protein sequence

MVRFFAAFQLLLLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQPLTDDRKLIVRVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFDWRTGVAAKDWSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRERNVFYSFVPSSFSYFMNLYYLFSIPFDLDPIVMFVSLTHDYSLLGGRDARSEQKYKYKDGMVEFAIAFCLLISGGIANMALEDLF

Homology

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BLAST of Lsi02G017600 vs. Swiss-Prot
Match: P24D9_ARATH (Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana GN=At1g26690 PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 5.8e-55
Identity = 100/157 (63.69%), Postives = 124/157 (78.98%), Query Frame = 1


Query: 10  LLLLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQPLTDDRKLIV 69
           +LL +   S  S+SL F+LQSG TKCISEDIK N+MTVGKY VVNPNE  P     K+ +
Sbjct: 11  ILLFLAISSQVSQSLHFELQSGRTKCISEDIKSNSMTVGKYTVVNPNEAHPSPQSHKISI 70

Query: 70  RVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFDWRTGVAAKD 129
           RVTS+ GNTYH+++ VESGQF F A E+GD+MAC+ A DH+P+VTLS+DFDWRTGV +K 
Sbjct: 71  RVTSSYGNTYHHAEDVESGQFAFTAVESGDYMACYTAVDHKPEVTLSIDFDWRTGVQSKS 130

Query: 130 WSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 167
           WS+VAKK  VEVME ++++L ET NSI EEM+YLRER
Sbjct: 131 WSSVAKKSQVEVMEFDVKRLIETVNSIHEEMFYLRER 167

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BLAST of Lsi02G017600 vs. Swiss-Prot
Match: P24DA_ARATH (Transmembrane emp24 domain-containing protein p24delta10 OS=Arabidopsis thaliana GN=At1g69460 PE=1 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.6e-52
Identity = 95/157 (60.51%), Postives = 124/157 (78.98%), Query Frame = 1


Query: 10  LLLLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQPLTDDRKLIV 69
           +LL++   S  S SL FDL SG TKCI+EDIK N+MTVGKY++ NP+EGQ L    K+ V
Sbjct: 11  MLLILAIWSPISHSLHFDLHSGRTKCIAEDIKSNSMTVGKYNIDNPHEGQALPQTHKISV 70

Query: 70  RVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFDWRTGVAAKD 129
           +VTS +GN YH++++V+SGQF F A EAGD+MACF A DH+P+V+LS+DF+W+TGV +K 
Sbjct: 71  KVTSNSGNNYHHAEQVDSGQFAFSAVEAGDYMACFTAVDHKPEVSLSIDFEWKTGVQSKS 130

Query: 130 WSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 167
           W+NVAKK  VEVME E++ L +T NSI EEMYYLR+R
Sbjct: 131 WANVAKKSQVEVMEFEVKSLLDTVNSIHEEMYYLRDR 167

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BLAST of Lsi02G017600 vs. Swiss-Prot
Match: P24D7_ARATH (Transmembrane emp24 domain-containing protein p24delta7 OS=Arabidopsis thaliana GN=At1g14010 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 6.0e-52
Identity = 94/157 (59.87%), Postives = 119/157 (75.80%), Query Frame = 1


Query: 10  LLLLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQPLTDDRKLIV 69
           +LL++  LS  + S+R++L SGHTKCISE+I  NAMT+GKY ++NP+E  PL    K+ V
Sbjct: 9   VLLILSILSPVTLSIRYELLSGHTKCISEEIHANAMTIGKYSIINPHEDHPLPSSHKVTV 68

Query: 70  RVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFDWRTGVAAKD 129
           RVTS  G  YH SD VESGQF FVA E GD+++CF A DH+P+ TL +DFDWRTG+  KD
Sbjct: 69  RVTSPQGTAYHESDGVESGQFSFVAVETGDYISCFSAVDHKPETTLIIDFDWRTGIHTKD 128

Query: 130 WSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 167
           WSNVAKK  VE ME E++KLFET N I +EM+YLR+R
Sbjct: 129 WSNVAKKSQVETMEFEVKKLFETVNGIHDEMFYLRDR 165

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BLAST of Lsi02G017600 vs. Swiss-Prot
Match: P24D8_ARATH (Transmembrane emp24 domain-containing protein p24delta8 OS=Arabidopsis thaliana GN=At2g03290 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 9.2e-45
Identity = 85/158 (53.80%), Postives = 117/158 (74.05%), Query Frame = 1


Query: 10  LLLLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNE-GQPLTDDRKLI 69
           LLL+I  LS R+ S+R++L+S  TKCI E+I +NAM++GKY +VNPNE   PL D  K+I
Sbjct: 9   LLLIIALLSPRTLSMRYELKSSKTKCIGEEIHENAMSIGKYFIVNPNEDNHPLPDSHKII 68

Query: 70  VRVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFDWRTGVAAK 129
           V+V    G   H +DKVE+GQF F A E G ++AC  A D++P+ TL++DFDW+TGV +K
Sbjct: 69  VKVMPPQGKNLHEADKVEAGQFSFTAYENGSYVACITAIDYKPETTLTIDFDWKTGVHSK 128

Query: 130 DWSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 167
           +W+NVAKK  V++ME +++ L +T  SI EEMYYLRER
Sbjct: 129 EWTNVAKKSQVDMMEYQVKTLMDTVISIHEEMYYLRER 166

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BLAST of Lsi02G017600 vs. Swiss-Prot
Match: P24DB_ARATH (Transmembrane emp24 domain-containing protein p24delta11 OS=Arabidopsis thaliana GN=At3g29070 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.6e-41
Identity = 75/157 (47.77%), Postives = 112/157 (71.34%), Query Frame = 1


Query: 10  LLLLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQPLTDDRKLIV 69
           + +++  +  R ES+R D++SG+TKCIS+DIK N MTVG Y +VNPNEG  L    KL V
Sbjct: 22  MTMMMMMVMRRGESMRLDMESGNTKCISDDIKTNYMTVGTYSIVNPNEGHHLPPSHKLFV 81

Query: 70  RVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFDWRTGVAAKD 129
            V+S  G ++H+++ VESG+F F A E GD+M CF AP ++P    +VDF+W++GV AKD
Sbjct: 82  TVSSPKGKSHHHAENVESGKFVFTAEETGDYMTCFVAPGYRPTAKFAVDFEWKSGVEAKD 141

Query: 130 WSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 167
           W+ +AK+G + ++E+E++KL +   +I EEM+ L ER
Sbjct: 142 WTTIAKRGQITMLEVEVRKLLDVTETIHEEMFQLIER 178

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BLAST of Lsi02G017600 vs. TrEMBL
Match: A0A0A0KTU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G468440 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.4e-71
Identity = 135/140 (96.43%), Postives = 137/140 (97.86%), Query Frame = 1


Query: 1   MVRFFAAFQLLLLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQP 60
           MVRF AAF LL+LIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQP
Sbjct: 1   MVRFVAAFHLLVLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQP 60

Query: 61  LTDDRKLIVRVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFD 120
           LTD+RKLIVRVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQP VTLSVDFD
Sbjct: 61  LTDERKLIVRVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPIVTLSVDFD 120

Query: 121 WRTGVAAKDWSNVAKKGSVE 141
           WRTGVAAKDWSNVAKKGSVE
Sbjct: 121 WRTGVAAKDWSNVAKKGSVE 140

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BLAST of Lsi02G017600 vs. TrEMBL
Match: M5XYS3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011387mg PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.1e-65
Identity = 120/155 (77.42%), Postives = 138/155 (89.03%), Query Frame = 1


Query: 12  LLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQPLTDDRKLIVRV 71
           +++GFLSS SESLRF+LQSGHTKCI EDIK NAMTVGKY VVNPNEG P+ D  KL VRV
Sbjct: 11  VILGFLSSTSESLRFELQSGHTKCIVEDIKANAMTVGKYSVVNPNEGHPIPDSHKLTVRV 70

Query: 72  TSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFDWRTGVAAKDWS 131
           TS  GN YHYS+ VESGQF FVAAEAGD+MACFWAPDH+PQ+TL+++FDW+TGVAAKDWS
Sbjct: 71  TSHYGNNYHYSELVESGQFAFVAAEAGDYMACFWAPDHKPQITLTIEFDWKTGVAAKDWS 130

Query: 132 NVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 167
           NVAKKG+V+VMELEL+KLFET  SI EEM+YLR+R
Sbjct: 131 NVAKKGTVDVMELELKKLFETVTSIHEEMFYLRQR 165

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BLAST of Lsi02G017600 vs. TrEMBL
Match: A0A067GTP9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028261mg PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.1e-63
Identity = 114/157 (72.61%), Postives = 139/157 (88.54%), Query Frame = 1


Query: 10  LLLLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQPLTDDRKLIV 69
           L+L+IG LSS S+SLRF++QS HTKCI+EDIK N+MTVGKY+VVNPN+G PL +  KL V
Sbjct: 8   LVLVIGILSSTSQSLRFEIQSAHTKCIAEDIKSNSMTVGKYNVVNPNDGHPLPESHKLTV 67

Query: 70  RVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFDWRTGVAAKD 129
           RVTSA GN+YHY+D+V+SGQF F AAEAGD+MACFWA DH PQ T+++DFDWRTGV AKD
Sbjct: 68  RVTSAYGNSYHYADRVDSGQFAFTAAEAGDYMACFWAVDHSPQTTVTIDFDWRTGVQAKD 127

Query: 130 WSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 167
           WSNVAKKGSV+VMELEL+KL++T +SI +EM+YLRER
Sbjct: 128 WSNVAKKGSVDVMELELKKLYDTVSSIHQEMFYLRER 164

[Close]

BLAST of Lsi02G017600 vs. TrEMBL
Match: A0A067H635_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028261mg PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.1e-63
Identity = 114/157 (72.61%), Postives = 139/157 (88.54%), Query Frame = 1


Query: 10  LLLLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQPLTDDRKLIV 69
           L+L+IG LSS S+SLRF++QS HTKCI+EDIK N+MTVGKY+VVNPN+G PL +  KL V
Sbjct: 8   LVLVIGILSSTSQSLRFEIQSAHTKCIAEDIKSNSMTVGKYNVVNPNDGHPLPESHKLTV 67

Query: 70  RVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFDWRTGVAAKD 129
           RVTSA GN+YHY+D+V+SGQF F AAEAGD+MACFWA DH PQ T+++DFDWRTGV AKD
Sbjct: 68  RVTSAYGNSYHYADRVDSGQFAFTAAEAGDYMACFWAVDHSPQTTVTIDFDWRTGVQAKD 127

Query: 130 WSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 167
           WSNVAKKGSV+VMELEL+KL++T +SI +EM+YLRER
Sbjct: 128 WSNVAKKGSVDVMELELKKLYDTVSSIHQEMFYLRER 164

[Close]

BLAST of Lsi02G017600 vs. TrEMBL
Match: V4TQ49_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032741mg PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.1e-63
Identity = 114/157 (72.61%), Postives = 139/157 (88.54%), Query Frame = 1


Query: 10  LLLLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQPLTDDRKLIV 69
           L+L+IG LSS S+SLRF++QS HTKCI+EDIK N+MTVGKY+VVNPN+G PL +  KL V
Sbjct: 8   LVLVIGILSSTSQSLRFEIQSAHTKCIAEDIKSNSMTVGKYNVVNPNDGHPLPESHKLTV 67

Query: 70  RVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFDWRTGVAAKD 129
           RVTSA GN+YHY+D+V+SGQF F AAEAGD+MACFWA DH PQ T+++DFDWRTGV AKD
Sbjct: 68  RVTSAYGNSYHYADRVDSGQFAFTAAEAGDYMACFWAVDHSPQTTVTIDFDWRTGVQAKD 127

Query: 130 WSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 167
           WSNVAKKGSV+VMELEL+KL++T +SI +EM+YLRER
Sbjct: 128 WSNVAKKGSVDVMELELKKLYDTVSSIHQEMFYLRER 164

[Close]

BLAST of Lsi02G017600 vs. TAIR10
Match: AT1G26690.1 (AT1G26690.1 emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 215.7 bits (548), Expect = 3.3e-56
Identity = 100/157 (63.69%), Postives = 124/157 (78.98%), Query Frame = 1


Query: 10  LLLLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQPLTDDRKLIV 69
           +LL +   S  S+SL F+LQSG TKCISEDIK N+MTVGKY VVNPNE  P     K+ +
Sbjct: 11  ILLFLAISSQVSQSLHFELQSGRTKCISEDIKSNSMTVGKYTVVNPNEAHPSPQSHKISI 70

Query: 70  RVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFDWRTGVAAKD 129
           RVTS+ GNTYH+++ VESGQF F A E+GD+MAC+ A DH+P+VTLS+DFDWRTGV +K 
Sbjct: 71  RVTSSYGNTYHHAEDVESGQFAFTAVESGDYMACYTAVDHKPEVTLSIDFDWRTGVQSKS 130

Query: 130 WSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 167
           WS+VAKK  VEVME ++++L ET NSI EEM+YLRER
Sbjct: 131 WSSVAKKSQVEVMEFDVKRLIETVNSIHEEMFYLRER 167

[Close]

BLAST of Lsi02G017600 vs. TAIR10
Match: AT1G69460.1 (AT1G69460.1 emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 207.6 bits (527), Expect = 8.9e-54
Identity = 95/157 (60.51%), Postives = 124/157 (78.98%), Query Frame = 1


Query: 10  LLLLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQPLTDDRKLIV 69
           +LL++   S  S SL FDL SG TKCI+EDIK N+MTVGKY++ NP+EGQ L    K+ V
Sbjct: 11  MLLILAIWSPISHSLHFDLHSGRTKCIAEDIKSNSMTVGKYNIDNPHEGQALPQTHKISV 70

Query: 70  RVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFDWRTGVAAKD 129
           +VTS +GN YH++++V+SGQF F A EAGD+MACF A DH+P+V+LS+DF+W+TGV +K 
Sbjct: 71  KVTSNSGNNYHHAEQVDSGQFAFSAVEAGDYMACFTAVDHKPEVSLSIDFEWKTGVQSKS 130

Query: 130 WSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 167
           W+NVAKK  VEVME E++ L +T NSI EEMYYLR+R
Sbjct: 131 WANVAKKSQVEVMEFEVKSLLDTVNSIHEEMYYLRDR 167

[Close]

BLAST of Lsi02G017600 vs. TAIR10
Match: AT1G14010.1 (AT1G14010.1 emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 205.7 bits (522), Expect = 3.4e-53
Identity = 94/157 (59.87%), Postives = 119/157 (75.80%), Query Frame = 1


Query: 10  LLLLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQPLTDDRKLIV 69
           +LL++  LS  + S+R++L SGHTKCISE+I  NAMT+GKY ++NP+E  PL    K+ V
Sbjct: 9   VLLILSILSPVTLSIRYELLSGHTKCISEEIHANAMTIGKYSIINPHEDHPLPSSHKVTV 68

Query: 70  RVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFDWRTGVAAKD 129
           RVTS  G  YH SD VESGQF FVA E GD+++CF A DH+P+ TL +DFDWRTG+  KD
Sbjct: 69  RVTSPQGTAYHESDGVESGQFSFVAVETGDYISCFSAVDHKPETTLIIDFDWRTGIHTKD 128

Query: 130 WSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 167
           WSNVAKK  VE ME E++KLFET N I +EM+YLR+R
Sbjct: 129 WSNVAKKSQVETMEFEVKKLFETVNGIHDEMFYLRDR 165

[Close]

BLAST of Lsi02G017600 vs. TAIR10
Match: AT2G03290.1 (AT2G03290.1 emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 181.8 bits (460), Expect = 5.2e-46
Identity = 85/158 (53.80%), Postives = 117/158 (74.05%), Query Frame = 1


Query: 10  LLLLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNE-GQPLTDDRKLI 69
           LLL+I  LS R+ S+R++L+S  TKCI E+I +NAM++GKY +VNPNE   PL D  K+I
Sbjct: 9   LLLIIALLSPRTLSMRYELKSSKTKCIGEEIHENAMSIGKYFIVNPNEDNHPLPDSHKII 68

Query: 70  VRVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFDWRTGVAAK 129
           V+V    G   H +DKVE+GQF F A E G ++AC  A D++P+ TL++DFDW+TGV +K
Sbjct: 69  VKVMPPQGKNLHEADKVEAGQFSFTAYENGSYVACITAIDYKPETTLTIDFDWKTGVHSK 128

Query: 130 DWSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 167
           +W+NVAKK  V++ME +++ L +T  SI EEMYYLRER
Sbjct: 129 EWTNVAKKSQVDMMEYQVKTLMDTVISIHEEMYYLRER 166

[Close]

BLAST of Lsi02G017600 vs. TAIR10
Match: AT2G03040.1 (AT2G03040.1 emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 179.5 bits (454), Expect = 2.6e-45
Identity = 84/158 (53.16%), Postives = 116/158 (73.42%), Query Frame = 1


Query: 10  LLLLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQ-PLTDDRKLI 69
           LLL+I  LS R+ S+R++L+S  TKCI E+I +NAM++GKY +VNPNE   PL D  K+I
Sbjct: 9   LLLIIALLSPRTLSMRYELKSSKTKCIGEEIHENAMSIGKYFIVNPNEDHHPLPDSHKII 68

Query: 70  VRVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFDWRTGVAAK 129
           V+V    G   H +D VE+GQF F A E G ++AC  A D++P+ TL++DFDW+TGV +K
Sbjct: 69  VKVMPPQGKNLHEADNVEAGQFSFTAYENGSYVACITAIDYKPETTLTIDFDWKTGVHSK 128

Query: 130 DWSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 167
           +W+NVAKK  V++ME +++ L +T  SI EEMYYLRER
Sbjct: 129 EWTNVAKKSQVDMMEYQVKTLMDTVISIHEEMYYLRER 166

[Close]

BLAST of Lsi02G017600 vs. NCBI nr
Match: gi|659131580|ref|XP_008465758.1| (PREDICTED: transmembrane emp24 domain-containing protein p24delta9-like [Cucumis melo])

HSP 1 Score: 331.6 bits (849), Expect = 1.2e-87
Identity = 163/166 (98.19%), Postives = 165/166 (99.40%), Query Frame = 1


Query: 1   MVRFFAAFQLLLLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQP 60
           MVRFF AFQLL+LIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQP
Sbjct: 1   MVRFFPAFQLLVLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQP 60

Query: 61  LTDDRKLIVRVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFD 120
           LTD+RKLIVRVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFD
Sbjct: 61  LTDERKLIVRVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFD 120

Query: 121 WRTGVAAKDWSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 167
           WRTGVAAKDWSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRER
Sbjct: 121 WRTGVAAKDWSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 166

[Close]

BLAST of Lsi02G017600 vs. NCBI nr
Match: gi|449452048|ref|XP_004143772.1| (PREDICTED: transmembrane emp24 domain-containing protein p24delta9 [Cucumis sativus])

HSP 1 Score: 325.9 bits (834), Expect = 6.3e-86
Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 1


Query: 1   MVRFFAAFQLLLLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQP 60
           MVRF AAF LL+LIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQP
Sbjct: 1   MVRFVAAFHLLVLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQP 60

Query: 61  LTDDRKLIVRVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFD 120
           LTD+RKLIVRVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQP VTLSVDFD
Sbjct: 61  LTDERKLIVRVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPIVTLSVDFD 120

Query: 121 WRTGVAAKDWSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 167
           WRTGVAAKDWSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRER
Sbjct: 121 WRTGVAAKDWSNVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 166

[Close]

BLAST of Lsi02G017600 vs. NCBI nr
Match: gi|700195974|gb|KGN51151.1| (hypothetical protein Csa_5G468440 [Cucumis sativus])

HSP 1 Score: 277.7 bits (709), Expect = 2.0e-71
Identity = 135/140 (96.43%), Postives = 137/140 (97.86%), Query Frame = 1


Query: 1   MVRFFAAFQLLLLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQP 60
           MVRF AAF LL+LIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQP
Sbjct: 1   MVRFVAAFHLLVLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQP 60

Query: 61  LTDDRKLIVRVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFD 120
           LTD+RKLIVRVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQP VTLSVDFD
Sbjct: 61  LTDERKLIVRVTSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPIVTLSVDFD 120

Query: 121 WRTGVAAKDWSNVAKKGSVE 141
           WRTGVAAKDWSNVAKKGSVE
Sbjct: 121 WRTGVAAKDWSNVAKKGSVE 140

[Close]

BLAST of Lsi02G017600 vs. NCBI nr
Match: gi|645229679|ref|XP_008221573.1| (PREDICTED: transmembrane emp24 domain-containing protein p24delta9-like [Prunus mume])

HSP 1 Score: 258.1 bits (658), Expect = 1.6e-65
Identity = 120/155 (77.42%), Postives = 138/155 (89.03%), Query Frame = 1


Query: 12  LLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQPLTDDRKLIVRV 71
           +++GFLSS SESLRF+LQSGHTKCI EDIK NAMTVGKY VVNPNEG P+ D  KL VRV
Sbjct: 11  VILGFLSSTSESLRFELQSGHTKCIVEDIKANAMTVGKYSVVNPNEGHPIPDSHKLTVRV 70

Query: 72  TSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFDWRTGVAAKDWS 131
           TS  GN YHYS+ VESGQF FVAAEAGD+MACFWAPDH+PQ+TL+++FDW+TGVAAKDWS
Sbjct: 71  TSHYGNNYHYSELVESGQFAFVAAEAGDYMACFWAPDHKPQITLTIEFDWKTGVAAKDWS 130

Query: 132 NVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 167
           NVAKKGSV+VMELEL+KLF+T  SI EEM+YLR+R
Sbjct: 131 NVAKKGSVDVMELELKKLFDTVTSIHEEMFYLRQR 165

[Close]

BLAST of Lsi02G017600 vs. NCBI nr
Match: gi|596287681|ref|XP_007225814.1| (hypothetical protein PRUPE_ppa011387mg [Prunus persica])

HSP 1 Score: 258.1 bits (658), Expect = 1.6e-65
Identity = 120/155 (77.42%), Postives = 138/155 (89.03%), Query Frame = 1


Query: 12  LLIGFLSSRSESLRFDLQSGHTKCISEDIKQNAMTVGKYHVVNPNEGQPLTDDRKLIVRV 71
           +++GFLSS SESLRF+LQSGHTKCI EDIK NAMTVGKY VVNPNEG P+ D  KL VRV
Sbjct: 11  VILGFLSSTSESLRFELQSGHTKCIVEDIKANAMTVGKYSVVNPNEGHPIPDSHKLTVRV 70

Query: 72  TSATGNTYHYSDKVESGQFGFVAAEAGDFMACFWAPDHQPQVTLSVDFDWRTGVAAKDWS 131
           TS  GN YHYS+ VESGQF FVAAEAGD+MACFWAPDH+PQ+TL+++FDW+TGVAAKDWS
Sbjct: 71  TSHYGNNYHYSELVESGQFAFVAAEAGDYMACFWAPDHKPQITLTIEFDWKTGVAAKDWS 130

Query: 132 NVAKKGSVEVMELELQKLFETANSIQEEMYYLRER 167
           NVAKKG+V+VMELEL+KLFET  SI EEM+YLR+R
Sbjct: 131 NVAKKGTVDVMELELKKLFETVTSIHEEMFYLRQR 165

The following BLAST results are available for this feature:

BLAST of Lsi02G017600 vs. Swiss-Prot


Match Name	E-value	Identity	Description
P24D9_ARATH	5.8e-55	63.69	Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana ...	[more]
P24DA_ARATH	1.6e-52	60.51	Transmembrane emp24 domain-containing protein p24delta10 OS=Arabidopsis thaliana...	[more]
P24D7_ARATH	6.0e-52	59.87	Transmembrane emp24 domain-containing protein p24delta7 OS=Arabidopsis thaliana ...	[more]
P24D8_ARATH	9.2e-45	53.80	Transmembrane emp24 domain-containing protein p24delta8 OS=Arabidopsis thaliana ...	[more]
P24DB_ARATH	1.6e-41	47.77	Transmembrane emp24 domain-containing protein p24delta11 OS=Arabidopsis thaliana...	[more]

BLAST of Lsi02G017600 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTU9_CUCSA	1.4e-71	96.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G468440 PE=3 SV=1	[more]
M5XYS3_PRUPE	1.1e-65	77.42	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011387mg PE=3 SV=1	[more]
A0A067GTP9_CITSI	3.1e-63	72.61	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028261mg PE=3 SV=1	[more]
A0A067H635_CITSI	3.1e-63	72.61	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028261mg PE=3 SV=1	[more]
V4TQ49_9ROSI	3.1e-63	72.61	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032741mg PE=3 SV=1	[more]

BLAST of Lsi02G017600 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G26690.1	3.3e-56	63.69	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G69460.1	8.9e-54	60.51	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G14010.1	3.4e-53	59.87	emp24/gp25L/p24 family/GOLD family protein	[more]
AT2G03290.1	5.2e-46	53.80	emp24/gp25L/p24 family/GOLD family protein	[more]
AT2G03040.1	2.6e-45	53.16	emp24/gp25L/p24 family/GOLD family protein	[more]

BLAST of Lsi02G017600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131580\|ref\|XP_008465758.1\|	1.2e-87	98.19	PREDICTED: transmembrane emp24 domain-containing protein p24delta9-like [Cucumis...	[more]
gi\|449452048\|ref\|XP_004143772.1\|	6.3e-86	96.99	PREDICTED: transmembrane emp24 domain-containing protein p24delta9 [Cucumis sati...	[more]
gi\|700195974\|gb\|KGN51151.1\|	2.0e-71	96.43	hypothetical protein Csa_5G468440 [Cucumis sativus]	[more]
gi\|645229679\|ref\|XP_008221573.1\|	1.6e-65	77.42	PREDICTED: transmembrane emp24 domain-containing protein p24delta9-like [Prunus ...	[more]
gi\|596287681\|ref\|XP_007225814.1\|	1.6e-65	77.42	hypothetical protein PRUPE_ppa011387mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

Vocabulary: **INTERPRO**
Term	Definition
IPR015720	TMP21-related
IPR009038	GOLD_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G017600.1	Lsi02G017600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009038	GOLD domain	PFAM	PF01105	EMP24_GP25L	coord: 23..167 score: 8.6
IPR009038	GOLD domain	SMART	SM01190	EMP24_GP25L_2	coord: 23..188 score: 2.1
IPR009038	GOLD domain	PROFILE	PS50866	GOLD	coord: 33..148 score: 12
IPR015720	TMP21-related	PANTHER	PTHR22811	TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN	coord: 10..166 score: 5.8E
None	No IPR available	unknown	Coil	Coil	coord: 139..159 scor
None	No IPR available	PANTHER	PTHR22811:SF47	EMP24/GP25L/P24 FAMILY/GOLD DOMAIN-CONTAINING PROTEIN-RELATED	coord: 10..166 score: 5.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi02G017600	Csa5G468440	Cucumber (Chinese Long) v2	culsiB344
Lsi02G017600	CSPI05G16050	Wild cucumber (PI 183967)	cpilsiB348
Lsi02G017600	Cucsa.033740	Cucumber (Gy14) v1	cgylsiB006
Lsi02G017600	CmaCh12G007390	Cucurbita maxima (Rimu)	cmalsiB167
Lsi02G017600	CmoCh12G006730	Cucurbita moschata (Rifu)	cmolsiB156
Lsi02G017600	Cla005559	Watermelon (97103) v1	lsiwmB177
Lsi02G017600	MELO3C002981	Melon (DHL92) v3.5.1	lsimeB164
Lsi02G017600	ClCG09G022050	Watermelon (Charleston Gray)	lsiwcgB161
Lsi02G017600	MELO3C002981.2	Melon (DHL92) v3.6.1	lsimedB173
Lsi02G017600	Cla97C09G183470	Watermelon (97103) v2	lsiwmbB214
Lsi02G017600	Cp4.1LG07g06430	Cucurbita pepo (Zucchini)	cpelsiB668
Lsi02G017600	Cp4.1LG00g00350	Cucurbita pepo (Zucchini)	cpelsiB009
Lsi02G017600	CsGy5G015790	Cucumber (Gy14) v2	cgyblsiB316
Lsi02G017600	Carg26233	Silver-seed gourd	carlsiB291
Lsi02G017600	CsaV3_5G025090	Cucumber (Chinese Long) v3	cuclsiB368

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G017600	Cucurbita maxima (Rimu)	cmalsiB722
Lsi02G017600	Cucurbita moschata (Rifu)	cmolsiB713
Lsi02G017600	Wild cucumber (PI 183967)	cpilsiB351
Lsi02G017600	Melon (DHL92) v3.5.1	lsimeB162
Lsi02G017600	Cucumber (Gy14) v2	cgyblsiB318
Lsi02G017600	Melon (DHL92) v3.6.1	lsimedB171
Lsi02G017600	Cucumber (Chinese Long) v3	cuclsiB370
Lsi02G017600	Wax gourd	lsiwgoB208