Lsi02G017080 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G017080
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Bromodomain-containing factor 1
Location	chr02 : 22806826 .. 22811135 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTCCAAATCTTTTCGTTCTAACGAATGGAACTATATGTATTATTGGATACTGGGAAAGCTGGGATCAAAACATGTGGAACGTATTGCGTTTTAGGCTGTTTTGATTCGTAGATGAAAAGACAACAGTCCGGTGATTTGGTCGCTGGTTTGGTTCGATTAGGTTAATATTTGTAGTTATTGATAGAAGGGAGATTACATAGAAGTAGAGTAGCTCACCTTTTAATTTGGGGGTTCCTTGCGATGTTGTTTATTGGGGTAAGTTTGGTGCTACGGAAGGACAACTCGAAAATCCAGTTTGTTCTTTTATTCATAATCAGTTGCATCAGTCTGTTTCATAAATTGAATGATTTTCCTGCTTGATTTCATATCTATAGTTTGTGATGCTTCATATTCAGTTGCCTCATTCATTCATTGTCTGTTCTAGGGTTCTTTGTGCGGCGAGGGCTCCTTGTGAAACTACATTGCTGTTTTTTTATTTCTATGGTAAAAGTCCTAAATTTTTTATCTTATTACTCATAATATCATATATTTTCATATTTACTTCAAAAAAAAAAATTCACAACAAAGGTTTGCCTCATTTTATTTTAATTTTCGGGTTTAAATCTTAAAGAACTATTATGTTTCAAGGCATTTCACACCTTAAAGAACATTGTCTATCTTCTTTTTGATTCTTTGTCAATTTTCAAAGCAGCATTTGTGCTGCATAGTTCATCATTTTCACCAAACGTCGTTGTACAGAATCAGATAGATCCCATGGATGCAGCAGATGCCAGAAACTTTGGTGTGGGAGATACTGTTCATGCAGAAGTGGAAGGCTTTAGGCATCAAGTCGATGAGATCTTCCTGAAAGTTGACAGGGTAAAACACTGATATACTGTAACCTCATTGTTCTGCACTTCTTTTTCTTTTTGCTAGGTTTATTGCACATTTGATAGTTAGGGCATACGGTTGTCTTAGCAGACCTAGTATTCTCTGACTGAGAGAAGGTGACTTCCCCCCTTCTCCCCCTGTAATAAAAATATTTCATTGATTGATGAAATAAAAGAATGAATCCAACACCAATAGGTGATTACAATAAAAGTTGTCAGTTAGAGCATAAATAAGATAAGCTAAAATGAGATAAAGGGTTCTTACTTTTGCACCAAAGAAAAGCAGTAGAAAACACAAAATCCTTGAAACGATCAAAGATGAAAAAGAACCTCTGAAAAGCCGACCATTACGCTTGCCTCAAAGGTTCCACAAGAAAGACCTCACAAGAGCCAACCAAATCGTCTTGTACCAGCAAAAGGATGTCCGACCATAATCAAGGCAAGAAGATCAAAACTATTATTGGGGGATGGAAAAGACCACCCAAAAGCTTCCAGAATAAGTTACCAGAAGCGAGAAGCAAAGAAGCAGTGCATAAAGAGATGTGTAGGACATTCAACATGTTGATGACACATATGGCACAAAGAAGGAGAGAGATACATATGAGGCATACGTTGTTGAAAAATTTTGGTTTTCTTTACATATCCATAATTTACAAAAAGTAGATGGAAGTCTGGGAAAATAATTTTGTAGTCCTTAAAGTACAAAACTTTTTAATCCTTGAAGTTTTAAATATGGGTTTAAATAGTCTCTCAAGTTTTATTTATTTTTCATGATTGATGAAAACATTTAATTACTATTTAAGAGGTGTTTTCTTCCTTGTCAATGTAAAGAAACAGTTGTTTCCCGTTGAAAAAAGAAGTTACAATTTAAGAGATGGTATGATAACCAAGTTGGGGTGTGTGCTTTGTTGTAGGGTATTTTGGGGGAGAGAAATAATAAAACTTTTAAAAGGATTGAAAGGGAGTCTTCTAATGTTTGGTCAGATTTAGTATTTCTCTTTGGGTGTCAATGACAAATTCCTTTTGTAATTATTAGCTAGGTCTTATTTTTCTTGATTGGATTCCATTTTTAGGGTGCTCCATAGCTTAGTTTTTGGTATGCCCTTGTATTCTTTTCATTTTTTCTCTATGAAAGTTTTTCTTATATATATATAAAAGGAGATGGTATGACAGCCTACTTAATTTGACAAACATGACAAGTGAAGGGACATGAATATAATTAAGTGGAGGAAAGACTACTATTCATCATGGCGGTAAAATTTACCCCACATATGAGCAGATATCATCTTTTAATTTATCACCTCATAGACTCACATGTCATATCTTTATCAAAATTTGAACAACAAAATGACTTGAGAGACCAGTTTGAAATTTTAGGACAGCAATGCTAACACTAGATAGTAGTTCAGCTGGATCACACCAGATTCTTTTGTCCGGATATCACATATAATTACTTCACTTCCCATACTATAAGGATTAAAAAGTCCAAAATAGCAATCCTTTTTCTCGTCAAATTGTTAGTTTCAAATCTGAGCTTTCTTCTATCCTTGCAGCTTGAGCAAAGCGTGAATGAGATAGAACAGTTCTATTTGACGTTGAAAAAGAAGCAGCCAAATGGTAGTAAAGGTAGCTCTATTGTAAAGGATAAAGATAAGGAAAGACATGTTCCAAGTATTAAGAAGCAGCAGCAAGAAGCAGCTCGCAGAGAAGCTGCAGCTGCAAAGAGAATGCAAGAACTCATGCGGCAGTTTGGGACAATATTGCGTCAGGTTACCAACTCACTGGCATTTTGTTCATTTCCGTTGCTAATTGTTTGTGTTATTTCCTGTTTGCATGCTATCTCATGATCTGCCTTTTTGATATTGAATCTTCCTGTTCTTTGAGAAATTCATGCATTCATAGAGGTGGACTTGCCCTTGCACTAAATGTAGTGCTGCAAGATTAATGTCTTTGTCAGAATAAACATTTCTGTTCTGTGGCCCTTGTATGCATCCTTAATTAAAGCTATGTTGTAACCAACTTTTATGCCATATTAATATATTATTAACTCCTTGGAATGGAGTTATTTGAAAATTGTACCCCACATTTGGACATATGGTCTTTATATTTCTGCATCGACTTTCAGATATCACAGCATAAGTGGGCCTGGCCTTTTATGCAGCCAGTGGATGTGGAAGGTCTTGGATTACACGATTATTATGAGGTGAGGTCTATATCCCTATCTAATAAGATGTATGGATTTTGCGTCACTATTATAGATCTTTCTTCCAAGTCAGGTGGGACTACCCGCTGAGTTTAAGCACTACTATGGATATTTCTTCAAATGAAGATTTTGAGAGAAATCGACTACAGGCTCATCTTTCATGCTTGCATCACCTTTTTTGTGTGTGTTTCTCCAGTGGTTTGTCTAGATTGCGCTAGTTTTATGCATATGTCTTATAGCTTGGTTCTTCTATTTTGTGTAAGCTGAATATTCAATATGCATACATTTACCTCAAAAATGTTTAAAAGGCACGAGTGTGATTCTGAAGGTAGCTTTTCCTTCAATTAGGCGTGACTGCATGGGCATATTTTAGCATTGTTTGGTATGCACTCAGGTTCCGTAATCCTTCAGGTAACATGTGTACTGTAATTATTAGGTGATTGACAAGCCAATGGACTTCAGTACAATTAAAAATCAAATGGAGGCTAAGGATGGTACTGGATATAAGAATGTGAGAGAGATATGTTCCGATGTGAGATTAGTCTTCAAGAATGCAATGAAATATAATGATGAGAGAAGTGATGTTCACGTGATGGCCAAGACTTTGCTCGCAAAGTTTGAGGAGAAATGGCTTCAACTTCTGCCTAAAGTCACTGAAGAGGTAAGTTTTTTGTTTTGAGAACGGTTCTTGAATGGATCAATATTCCTTAATCAATTCATGGTGCCTGGGAGTTCTGATTCTTCAGAAACATGGTTTCATTTGTTTGAAAGAAATGTTAAAAAATATGGTTGAAGTTCTAAAAAGACCTCACCTTCCAGGAAAAGAGACGAGAAGATGAGGAAGCAGAAGCGCTGTTGGACATGCAGCTTGCTCAGGAAGCTGCTCAAGCAAAAATGGCTAGAGACATAAGTAACGAGGTTTGTTGTCCACCTTGTTCCAAGGATCTTGCTATCTAGAGAGAGTTTATCTGGAGATTGCATACTTCCTTTTACTCTTCCTATTACCTTATATGGGAAACATAATAGACTGTTTAAACATGGGTAATGAACTGTTTTCAGATTTATGAGGTAGATACGCAACTGGAAGAGCTTCGAGAACTGGTCGTGCAGAACTGCAGGTTTATTCTCACTTTTGTTATTTCAAATTTCAGCTTCCGAAGTTGTATTCTGGTACCATGCATTGATATAAATGCACGATTGCATTCCCCTATAGCATATTCAGAATTTGGCATTTGA

mRNA sequence

AGTTCCAAATCTTTTCGTTCTAACGAATGGAACTATATGTATTATTGGATACTGGGAAAGCTGGGATCAAAACATGTGGAACGTATTGCGTTTTAGGCTGTTTTGATTCGTAGATGAAAAGACAACAGTCCGGTGATTTGGTCGCTGGTTTGGTTCGATTAGGTTAATATTTGTAGTTATTGATAGAAGGGAGATTACATAGAAGTAGAGTAGCTCACCTTTTAATTTGGGGGTTCCTTGCGATGTTGTTTATTGGGGGTTCTTTGTGCGGCGAGGGCTCCTTGTGAAACTACATTGCTGTTTTTTTATTTCTATGAATCAGATAGATCCCATGGATGCAGCAGATGCCAGAAACTTTGGTGTGGGAGATACTGTTCATGCAGAAGTGGAAGGCTTTAGGCATCAAGTCGATGAGATCTTCCTGAAAGTTGACAGGCTTGAGCAAAGCGTGAATGAGATAGAACAGTTCTATTTGACGTTGAAAAAGAAGCAGCCAAATGGTAGTAAAGGTAGCTCTATTGTAAAGGATAAAGATAAGGAAAGACATGTTCCAAGTATTAAGAAGCAGCAGCAAGAAGCAGCTCGCAGAGAAGCTGCAGCTGCAAAGAGAATGCAAGAACTCATGCGGCAGTTTGGGACAATATTGCGTCAGATATCACAGCATAAGTGGGCCTGGCCTTTTATGCAGCCAGTGGATGTGGAAGGTCTTGGATTACACGATTATTATGAGGTGATTGACAAGCCAATGGACTTCAGTACAATTAAAAATCAAATGGAGGCTAAGGATGGTACTGGATATAAGAATGTGAGAGAGATATGTTCCGATGTGAGATTAGTCTTCAAGAATGCAATGAAATATAATGATGAGAGAAGTGATGTTCACGTGATGGCCAAGACTTTGCTCGCAAAGTTTGAGGAGAAATGGCTTCAACTTCTGCCTAAAGTCACTGAAGAGGAAAAGAGACGAGAAGATGAGGAAGCAGAAGCGCTGTTGGACATGCAGCTTGCTCAGGAAGCTGCTCAAGCAAAAATGGCTAGAGACATAAGTAACGAGATTTATGAGGTAGATACGCAACTGGAAGAGCTTCGAGAACTGGTCGTGCAGAACTGCAGGTTTATTCTCACTTTTGTTATTTCAAATTTCAGCTTCCGAAGTTGTATTCTGGTACCATGCATTGATATAAATGCACGATTGCATTCCCCTATAGCATATTCAGAATTTGGCATTTGA

Coding sequence (CDS)

ATGAATCAGATAGATCCCATGGATGCAGCAGATGCCAGAAACTTTGGTGTGGGAGATACTGTTCATGCAGAAGTGGAAGGCTTTAGGCATCAAGTCGATGAGATCTTCCTGAAAGTTGACAGGCTTGAGCAAAGCGTGAATGAGATAGAACAGTTCTATTTGACGTTGAAAAAGAAGCAGCCAAATGGTAGTAAAGGTAGCTCTATTGTAAAGGATAAAGATAAGGAAAGACATGTTCCAAGTATTAAGAAGCAGCAGCAAGAAGCAGCTCGCAGAGAAGCTGCAGCTGCAAAGAGAATGCAAGAACTCATGCGGCAGTTTGGGACAATATTGCGTCAGATATCACAGCATAAGTGGGCCTGGCCTTTTATGCAGCCAGTGGATGTGGAAGGTCTTGGATTACACGATTATTATGAGGTGATTGACAAGCCAATGGACTTCAGTACAATTAAAAATCAAATGGAGGCTAAGGATGGTACTGGATATAAGAATGTGAGAGAGATATGTTCCGATGTGAGATTAGTCTTCAAGAATGCAATGAAATATAATGATGAGAGAAGTGATGTTCACGTGATGGCCAAGACTTTGCTCGCAAAGTTTGAGGAGAAATGGCTTCAACTTCTGCCTAAAGTCACTGAAGAGGAAAAGAGACGAGAAGATGAGGAAGCAGAAGCGCTGTTGGACATGCAGCTTGCTCAGGAAGCTGCTCAAGCAAAAATGGCTAGAGACATAAGTAACGAGATTTATGAGGTAGATACGCAACTGGAAGAGCTTCGAGAACTGGTCGTGCAGAACTGCAGGTTTATTCTCACTTTTGTTATTTCAAATTTCAGCTTCCGAAGTTGTATTCTGGTACCATGCATTGATATAAATGCACGATTGCATTCCCCTATAGCATATTCAGAATTTGGCATTTGA

Protein sequence

MNQIDPMDAADARNFGVGDTVHAEVEGFRHQVDEIFLKVDRLEQSVNEIEQFYLTLKKKQPNGSKGSSIVKDKDKERHVPSIKKQQQEAARREAAAAKRMQELMRQFGTILRQISQHKWAWPFMQPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKMARDISNEIYEVDTQLEELRELVVQNCRFILTFVISNFSFRSCILVPCIDINARLHSPIAYSEFGI

Homology

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BLAST of Lsi02G017080 vs. Swiss-Prot
Match: GTE6_ARATH (Transcription factor GTE6 OS=Arabidopsis thaliana GN=GTE6 PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 5.2e-74
Identity = 150/246 (60.98%), Postives = 183/246 (74.39%), Query Frame = 1


Query: 24  EVEGFRHQVDEIFLKVDRLEQSVNEIEQFYLTLKKKQPNGSKGSSIVKDKDKERHVPSIK 83
           + E  + +VDE+   VD LE  + E+E+FY ++       S   SI KD +K RHV  I+
Sbjct: 20  DAECIKQRVDEVLQWVDSLEHKLKEVEEFYSSI-----GVSNSGSIGKDTEKGRHVVGIR 79

Query: 84  KQQQEAARREAAAAKRMQELMRQFGTILRQISQHKWAWPFMQPVDVEGLGLHDYYEVIDK 143
           K QQEAARREA AAKRMQ+LMRQFGTI RQI+QHK AWPFM PV+VEGLGLHDY+EVIDK
Sbjct: 80  KIQQEAARREAVAAKRMQDLMRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDK 139

Query: 144 PMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 203
           PMDFSTIKNQMEAKDGTGYK+V +I +D+RLVF+NAM YN+E SDV+ MAK LL KFEEK
Sbjct: 140 PMDFSTIKNQMEAKDGTGYKHVMQIYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEK 199

Query: 204 WLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKMARDISNEIYEVDTQLEELRELVV 263
           W   LPKV EEEK RE+EE +A  +  LA+EA+  K  R++ NEI   + +LE+L   VV
Sbjct: 200 WAHFLPKVQEEEKIREEEEKQAAKEALLAKEASHIKTTRELGNEICHANDELEKLMRKVV 259

Query: 264 QNCRFI 270
           + CR I
Sbjct: 260 ERCRKI 260

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BLAST of Lsi02G017080 vs. Swiss-Prot
Match: GTE1_ARATH (Transcription factor GTE1 OS=Arabidopsis thaliana GN=GTE1 PE=2 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.2e-67
Identity = 143/267 (53.56%), Postives = 183/267 (68.54%), Query Frame = 1


Query: 23  AEVEGFRHQVDEIFLKVDRLEQSVNEIEQFYLT------------------LKKKQPNGS 82
           +E+E F   VDEI  +V++LEQ V E+E FY T                  +   QPN S
Sbjct: 31  SELENFGTCVDEITDRVNQLEQKVVEVEHFYSTKDGAAQTNTSKSNSGGKKIAISQPNNS 90

Query: 83  KGSSIVKDKDKERHVPSIKKQQQEAARREAAAAKRMQELMRQFGTILRQISQHKWAWPFM 142
           KG+S  K+K K +HV S                    +LMRQF T+ RQI+QHKWAWPF+
Sbjct: 91  KGNSAGKEKSKGKHVSS-------------------PDLMRQFATMFRQIAQHKWAWPFL 150

Query: 143 QPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYND 202
           +PVDV+GLGLHDYY+VI+KPMD  TIK +ME+ +   Y NVREI +DVRLVFKNAM+YN+
Sbjct: 151 EPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSE---YSNVREIYADVRLVFKNAMRYNE 210

Query: 203 ERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKMARDI 262
           E+ DV+VMA++LL KFEEKWL ++PK+ EEEK++ DEEAE   + QL  EAAQA+MARD+
Sbjct: 211 EKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDEEAEKHANKQLTMEAAQAEMARDL 270

Query: 263 SNEIYEVDTQLEELRELVVQNCRFILT 272
           SNE+YE+D QLE+LRE VVQ CR + T
Sbjct: 271 SNELYEIDLQLEKLRESVVQRCRKLST 275

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BLAST of Lsi02G017080 vs. Swiss-Prot
Match: GTE2_ARATH (Transcription factor GTE2 OS=Arabidopsis thaliana GN=GTE2 PE=2 SV=2)

HSP 1 Score: 101.7 bits (252), Expect = 1.5e-20
Identity = 63/206 (30.58%), Postives = 106/206 (51.46%), Query Frame = 1


Query: 18  GDTVHAEVEGF------------RHQVDEIFLKVDRLEQSVNEIEQFYLTLKKKQPNGSK 77
           GD V  +++G+              +++E+    +R+E         Y T  +     + 
Sbjct: 67  GDYVSFDLDGYTSNQLRELKKRLNSELEEVRFLRERIESGTFVSGSVYTTQARSFAGETN 126

Query: 78  GSSIVKDKDKERHVPSIKKQQQEAARREAA----------AAKRMQELMRQFGTILRQIS 137
              + K K K++ +   +K+    A  E +          + K ++ +M   G IL ++ 
Sbjct: 127 DVGVKKTKTKKKKIGHGQKRSNPFATDEPSLKRHVALDLMSEKVLKSMMTTCGQILVKLM 186

Query: 138 QHKWAWPFMQPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLV 197
           +HKW+W F+ PVDV GLGLHDY+ ++DKPMD  T+K  +E      Y++  +  SDVRL 
Sbjct: 187 KHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEK---GLYRSPIDFASDVRLT 246

Query: 198 FKNAMKYNDERSDVHVMAKTLLAKFE 202
           F NAM YN +  DV++MA+ LL++F+
Sbjct: 247 FTNAMSYNPKGQDVYLMAEKLLSQFD 269

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BLAST of Lsi02G017080 vs. Swiss-Prot
Match: GTE4_ARATH (Transcription factor GTE4 OS=Arabidopsis thaliana GN=GTE4 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.6e-20
Identity = 65/182 (35.71%), Postives = 94/182 (51.65%), Query Frame = 1


Query: 32  VDEIFLKVDRLEQSVNEIEQFYLTLKKKQPNGSK---------GSSIVKDKDKERHVPSI 91
           V+++ + V    Q VNE    ++  +K+ P  ++         G  +   +  ++   S 
Sbjct: 349 VNQLSISVLENTQGVNE----HVEKEKRTPKANQFYRNSEFLLGDKLPPAESNKKSKSSS 408

Query: 92  KKQQQEAARREAAAAKRMQELMRQFGTILRQISQHKWAWPFMQPVDVEGLGLHDYYEVID 151
           KKQ  +      A  K    + +    +L ++ +HK  W F  PVDV+GLGL DYY +I+
Sbjct: 409 KKQGGDVGHGFGAGTK----VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIE 468

Query: 152 KPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEE 205
            PMD  TIK+ +       YK+ RE   DVRL F NAM YN E  DVH+MA TLL  FEE
Sbjct: 469 HPMDLGTIKSALMK---NLYKSPREFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEE 519

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BLAST of Lsi02G017080 vs. Swiss-Prot
Match: GTE3_ARATH (Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana GN=GTE3 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.0e-18
Identity = 60/172 (34.88%), Postives = 94/172 (54.65%), Query Frame = 1


Query: 37  LKVDRLEQSVN-EIEQFYLTLKKKQPNGSKGSSIVKDKDKERHVPSIKKQQQEAARREAA 96
           L+V  L++ +  E+E+    +K+ +P G+  + +   K K  +        ++     AA
Sbjct: 58  LEVRNLKRKLQAELEEVRSLIKRLEPQGNNFAPVPNKKLKTAN------GGKKGGVHGAA 117

Query: 97  AAKRMQELMRQFGTILRQISQHKWAWPFMQPVDVEGLGLHDYYEVIDKPMDFSTIKNQME 156
           A K   ++++    +L ++ +HK  W F  PVDV  LGLHDY+ +I +PMD  T+K ++ 
Sbjct: 118 ADKGTVQILKSCNNLLTKLMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLGTVKTRLS 177

Query: 157 AKDGTGYKNVREICSDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 208
               + YK+  E   DVRL F NAM YN    DV+ MA+ LL  FEEKW+ L
Sbjct: 178 K---SLYKSPLEFAEDVRLTFNNAMLYNPVGHDVYHMAEILLNLFEEKWVPL 220

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BLAST of Lsi02G017080 vs. TrEMBL
Match: A0A0A0KNN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G494370 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 1.6e-135
Identity = 254/265 (95.85%), Postives = 257/265 (96.98%), Query Frame = 1


Query: 7   MDAADARNFGVGDTVHAEVEGFRHQVDEIFLKVDRLEQSVNEIEQFYLTLKKKQPNGSKG 66
           MD AD RNF VGDTVH EV+GFRHQVDEIFLKVDRLEQ+VNEIEQFYLTLKKKQPNG+KG
Sbjct: 1   MDVADGRNFVVGDTVHTEVDGFRHQVDEIFLKVDRLEQNVNEIEQFYLTLKKKQPNGNKG 60

Query: 67  SSIVKDKDKERHVPSIKKQQQEAARREAAAAKRMQELMRQFGTILRQISQHKWAWPFMQP 126
           SSIVKDKDKERHVPSIKKQQQEAARREAAA KRMQELMRQFGTILRQISQHKWAWPFMQP
Sbjct: 61  SSIVKDKDKERHVPSIKKQQQEAARREAAATKRMQELMRQFGTILRQISQHKWAWPFMQP 120

Query: 127 VDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDER 186
           VDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDER
Sbjct: 121 VDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDER 180

Query: 187 SDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKMARDISN 246
           SDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKMARDISN
Sbjct: 181 SDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKMARDISN 240

Query: 247 EIYEVDTQLEELRELVVQNCRFILT 272
           EIYEVD QLEELRELVVQNCR I T
Sbjct: 241 EIYEVDMQLEELRELVVQNCRKIST 265

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BLAST of Lsi02G017080 vs. TrEMBL
Match: A0A067K1T8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23955 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 7.5e-112
Identity = 207/248 (83.47%), Postives = 233/248 (93.95%), Query Frame = 1


Query: 24  EVEGFRHQVDEIFLKVDRLEQSVNEIEQFYLTLKKKQPNGSKGSSIVKDKDKERHVPSIK 83
           EVEGF+++VDE+F KVD+LEQ VNE+EQFYL + KKQ  GSKGSSIVK+KDKE+HVPSI+
Sbjct: 25  EVEGFKNRVDELFNKVDKLEQRVNEVEQFYLNISKKQQTGSKGSSIVKEKDKEKHVPSIR 84

Query: 84  KQQQEAARREAAAAKRMQELMRQFGTILRQISQHKWAWPFMQPVDVEGLGLHDYYEVIDK 143
           KQQQ+A++REAAA+KRMQELMRQFGTILRQI+QHKWAWPFMQPVDV+GLGLHDYYEVIDK
Sbjct: 85  KQQQDASKREAAASKRMQELMRQFGTILRQITQHKWAWPFMQPVDVKGLGLHDYYEVIDK 144

Query: 144 PMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 203
           PMDFSTIKNQMEAKDGTGYKNVREIC+DVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK
Sbjct: 145 PMDFSTIKNQMEAKDGTGYKNVREICADVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 204

Query: 204 WLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKMARDISNEIYEVDTQLEELRELVV 263
           WLQLLPKVTEEEKRRE EEAEA LDMQLAQ+A  AKMAR++SNEIY++D  L+ELR++VV
Sbjct: 205 WLQLLPKVTEEEKRREVEEAEAQLDMQLAQQAVHAKMARELSNEIYDIDMHLDELRDMVV 264

Query: 264 QNCRFILT 272
           Q CR + T
Sbjct: 265 QKCRKMST 272

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BLAST of Lsi02G017080 vs. TrEMBL
Match: B9HLP1_POPTR (DNA-binding bromodomain-containing family protein OS=Populus trichocarpa GN=POPTR_0008s04260g PE=4 SV=2)

HSP 1 Score: 404.1 bits (1037), Expect = 1.6e-109
Identity = 215/274 (78.47%), Postives = 237/274 (86.50%), Query Frame = 1


Query: 1   MNQIDPMDAADARNFGVGDTVHAEVEGFRHQVDEIFLKVDRLEQSVNEIEQFYL--TLKK 60
           M  I P    D+ N  + ++  AE EGF+H VDEI  KVD+LEQ VNE+EQFY   T KK
Sbjct: 1   MEAISP-SIVDSGNLPIRNS-DAEAEGFKHSVDEILQKVDKLEQRVNEVEQFYSKNTSKK 60

Query: 61  KQPNGSKG-SSIVKDKDKERHVPSIKKQQQEAARREAAAAKRMQELMRQFGTILRQISQH 120
           +Q   SKG SS VKDKDKERH+PSI+KQQQ+A++REAAAAKRMQELMRQFGTILRQI+QH
Sbjct: 61  QQSGSSKGGSSTVKDKDKERHIPSIRKQQQDASKREAAAAKRMQELMRQFGTILRQITQH 120

Query: 121 KWAWPFMQPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFK 180
           KWAWPFMQPVDV+GLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYK+VREIC+DVRLVFK
Sbjct: 121 KWAWPFMQPVDVKGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKSVREICADVRLVFK 180

Query: 181 NAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQ 240
           NAMKYNDERSDVHVMAKTLL KFEEKWLQ LPKVTEEEKRRE+EEAEA LDMQLAQEAA 
Sbjct: 181 NAMKYNDERSDVHVMAKTLLGKFEEKWLQFLPKVTEEEKRREEEEAEAQLDMQLAQEAAH 240

Query: 241 AKMARDISNEIYEVDTQLEELRELVVQNCRFILT 272
           AKMARD+ NE+YEVD  LEELRE+VVQ CR + T
Sbjct: 241 AKMARDLGNELYEVDMHLEELREMVVQKCRKMST 272

[Close]

BLAST of Lsi02G017080 vs. TrEMBL
Match: B9HU40_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s22600g PE=4 SV=2)

HSP 1 Score: 403.3 bits (1035), Expect = 2.7e-109
Identity = 209/252 (82.94%), Postives = 228/252 (90.48%), Query Frame = 1


Query: 23  AEVEGFRHQVDEIFLKVDRLEQSVNEIEQFYLTLKKKQPNGSK---GSSIVKDKDKERHV 82
           A+ EGF+H VDEIF KVD+LEQ +N +EQFYL + KKQ +GS    GSSIVKDKDKERHV
Sbjct: 21  ADTEGFKHSVDEIFQKVDKLEQRMNGVEQFYLDISKKQQSGSSKGGGSSIVKDKDKERHV 80

Query: 83  PSIKKQQQEAARREAAAAKRMQELMRQFGTILRQISQHKWAWPFMQPVDVEGLGLHDYYE 142
            SI+KQQQ+A++REAAAAKRMQELMRQFGTILRQI+QHKWAWPFMQPVDV+GL LHDYYE
Sbjct: 81  TSIRKQQQDASKREAAAAKRMQELMRQFGTILRQITQHKWAWPFMQPVDVKGLRLHDYYE 140

Query: 143 VIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDERSDVHVMAKTLLAK 202
           VIDKPMDFSTIKNQMEAKDGTGYKNVREI +DVRLVFKNAMKYNDERSDVHVMAKTLL K
Sbjct: 141 VIDKPMDFSTIKNQMEAKDGTGYKNVREISADVRLVFKNAMKYNDERSDVHVMAKTLLGK 200

Query: 203 FEEKWLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKMARDISNEIYEVDTQLEELR 262
           FEEKWLQLLPKVTEEEKRREDEE EA LDMQLAQEAA AKMARD+SNE+YEVD  LEELR
Sbjct: 201 FEEKWLQLLPKVTEEEKRREDEEVEAKLDMQLAQEAAHAKMARDLSNELYEVDMHLEELR 260

Query: 263 ELVVQNCRFILT 272
           ++VVQ CR + T
Sbjct: 261 DIVVQKCRKMST 272

[Close]

BLAST of Lsi02G017080 vs. TrEMBL
Match: F6HNI4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g03950 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 5.0e-108
Identity = 209/267 (78.28%), Postives = 233/267 (87.27%), Query Frame = 1


Query: 7   MDAA--DARNFGVGDTVH--AEVEGFRHQVDEIFLKVDRLEQSVNEIEQFYLTLKKKQPN 66
           MDA+  D RN   G      A+VE  + +VD+IF KVD+LEQ VNE+EQFYLT  KKQ N
Sbjct: 1   MDASISDTRNMETGKNQGNAAQVESLKSRVDDIFTKVDKLEQRVNEVEQFYLTASKKQLN 60

Query: 67  GSKGSSIVKDKDK--ERHVPSIKKQQQEAARREAAAAKRMQELMRQFGTILRQISQHKWA 126
            SKGSSIVKDKDK  ERHV S+KKQQQ+A+RREAAAAKRMQELMRQFGTILRQI+QHKWA
Sbjct: 61  VSKGSSIVKDKDKDKERHVASVKKQQQDASRREAAAAKRMQELMRQFGTILRQITQHKWA 120

Query: 127 WPFMQPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAM 186
           WPFMQPVDVEGLGLHDYYEVI+KPMDFSTIKN+MEAKDG GYKNVREIC+DVRLVFKNAM
Sbjct: 121 WPFMQPVDVEGLGLHDYYEVIEKPMDFSTIKNKMEAKDGAGYKNVREICADVRLVFKNAM 180

Query: 187 KYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKM 246
           KYNDER DVHVMAKTLL KFEEKWLQLLPKV EE+KRRE+EEAEA LDM LAQEAA AKM
Sbjct: 181 KYNDERRDVHVMAKTLLGKFEEKWLQLLPKVAEEDKRREEEEAEAQLDMHLAQEAAHAKM 240

Query: 247 ARDISNEIYEVDTQLEELRELVVQNCR 268
           ARDISNE++E+D  L+++RE++VQ CR
Sbjct: 241 ARDISNELFEIDMHLDDIREIIVQKCR 267

[Close]

BLAST of Lsi02G017080 vs. TAIR10
Match: AT3G52280.2 (AT3G52280.2 general transcription factor group E6)

HSP 1 Score: 268.9 bits (686), Expect = 3.9e-72
Identity = 144/232 (62.07%), Postives = 175/232 (75.43%), Query Frame = 1


Query: 38  KVDRLEQSVNEIEQFYLTLKKKQPNGSKGSSIVKDKDKERHVPSIKKQQQEAARREAAAA 97
           + + LE  + E+E+FY ++       S   SI KD +K RHV  I+K QQEAARREA AA
Sbjct: 51  RYELLEHKLKEVEEFYSSI-----GVSNSGSIGKDTEKGRHVVGIRKIQQEAARREAVAA 110

Query: 98  KRMQELMRQFGTILRQISQHKWAWPFMQPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAK 157
           KRMQ+LMRQFGTI RQI+QHK AWPFM PV+VEGLGLHDY+EVIDKPMDFSTIKNQMEAK
Sbjct: 111 KRMQDLMRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAK 170

Query: 158 DGTGYKNVREICSDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKR 217
           DGTGYK+V +I +D+RLVF+NAM YN+E SDV+ MAK LL KFEEKW   LPKV EEEK 
Sbjct: 171 DGTGYKHVMQIYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKWAHFLPKVQEEEKI 230

Query: 218 REDEEAEALLDMQLAQEAAQAKMARDISNEIYEVDTQLEELRELVVQNCRFI 270
           RE+EE +A  +  LA+EA+  K  R++ NEI   + +LE+L   VV+ CR I
Sbjct: 231 REEEEKQAAKEALLAKEASHIKTTRELGNEICHANDELEKLMRKVVERCRKI 277

[Close]

BLAST of Lsi02G017080 vs. TAIR10
Match: AT2G34900.1 (AT2G34900.1 Transcription factor GTE6)

HSP 1 Score: 258.1 bits (658), Expect = 7.0e-69
Identity = 143/267 (53.56%), Postives = 183/267 (68.54%), Query Frame = 1


Query: 23  AEVEGFRHQVDEIFLKVDRLEQSVNEIEQFYLT------------------LKKKQPNGS 82
           +E+E F   VDEI  +V++LEQ V E+E FY T                  +   QPN S
Sbjct: 31  SELENFGTCVDEITDRVNQLEQKVVEVEHFYSTKDGAAQTNTSKSNSGGKKIAISQPNNS 90

Query: 83  KGSSIVKDKDKERHVPSIKKQQQEAARREAAAAKRMQELMRQFGTILRQISQHKWAWPFM 142
           KG+S  K+K K +HV S                    +LMRQF T+ RQI+QHKWAWPF+
Sbjct: 91  KGNSAGKEKSKGKHVSS-------------------PDLMRQFATMFRQIAQHKWAWPFL 150

Query: 143 QPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYND 202
           +PVDV+GLGLHDYY+VI+KPMD  TIK +ME+ +   Y NVREI +DVRLVFKNAM+YN+
Sbjct: 151 EPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSE---YSNVREIYADVRLVFKNAMRYNE 210

Query: 203 ERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKMARDI 262
           E+ DV+VMA++LL KFEEKWL ++PK+ EEEK++ DEEAE   + QL  EAAQA+MARD+
Sbjct: 211 EKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDEEAEKHANKQLTMEAAQAEMARDL 270

Query: 263 SNEIYEVDTQLEELRELVVQNCRFILT 272
           SNE+YE+D QLE+LRE VVQ CR + T
Sbjct: 271 SNELYEIDLQLEKLRESVVQRCRKLST 275

[Close]

BLAST of Lsi02G017080 vs. TAIR10
Match: AT5G10550.1 (AT5G10550.1 global transcription factor group E2)

HSP 1 Score: 101.7 bits (252), Expect = 8.3e-22
Identity = 63/206 (30.58%), Postives = 106/206 (51.46%), Query Frame = 1


Query: 18  GDTVHAEVEGF------------RHQVDEIFLKVDRLEQSVNEIEQFYLTLKKKQPNGSK 77
           GD V  +++G+              +++E+    +R+E         Y T  +     + 
Sbjct: 142 GDYVSFDLDGYTSNQLRELKKRLNSELEEVRFLRERIESGTFVSGSVYTTQARSFAGETN 201

Query: 78  GSSIVKDKDKERHVPSIKKQQQEAARREAA----------AAKRMQELMRQFGTILRQIS 137
              + K K K++ +   +K+    A  E +          + K ++ +M   G IL ++ 
Sbjct: 202 DVGVKKTKTKKKKIGHGQKRSNPFATDEPSLKRHVALDLMSEKVLKSMMTTCGQILVKLM 261

Query: 138 QHKWAWPFMQPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLV 197
           +HKW+W F+ PVDV GLGLHDY+ ++DKPMD  T+K  +E      Y++  +  SDVRL 
Sbjct: 262 KHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEK---GLYRSPIDFASDVRLT 321

Query: 198 FKNAMKYNDERSDVHVMAKTLLAKFE 202
           F NAM YN +  DV++MA+ LL++F+
Sbjct: 322 FTNAMSYNPKGQDVYLMAEKLLSQFD 344

[Close]

BLAST of Lsi02G017080 vs. TAIR10
Match: AT1G06230.1 (AT1G06230.1 global transcription factor group E4)

HSP 1 Score: 99.0 bits (245), Expect = 5.4e-21
Identity = 65/182 (35.71%), Postives = 94/182 (51.65%), Query Frame = 1


Query: 32  VDEIFLKVDRLEQSVNEIEQFYLTLKKKQPNGSK---------GSSIVKDKDKERHVPSI 91
           V+++ + V    Q VNE    ++  +K+ P  ++         G  +   +  ++   S 
Sbjct: 349 VNQLSISVLENTQGVNE----HVEKEKRTPKANQFYRNSEFLLGDKLPPAESNKKSKSSS 408

Query: 92  KKQQQEAARREAAAAKRMQELMRQFGTILRQISQHKWAWPFMQPVDVEGLGLHDYYEVID 151
           KKQ  +      A  K    + +    +L ++ +HK  W F  PVDV+GLGL DYY +I+
Sbjct: 409 KKQGGDVGHGFGAGTK----VFKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIE 468

Query: 152 KPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEE 205
            PMD  TIK+ +       YK+ RE   DVRL F NAM YN E  DVH+MA TLL  FEE
Sbjct: 469 HPMDLGTIKSALMK---NLYKSPREFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEE 519

[Close]

BLAST of Lsi02G017080 vs. TAIR10
Match: AT1G73150.1 (AT1G73150.1 global transcription factor group E3)

HSP 1 Score: 93.6 bits (231), Expect = 2.3e-19
Identity = 60/172 (34.88%), Postives = 94/172 (54.65%), Query Frame = 1


Query: 37  LKVDRLEQSVN-EIEQFYLTLKKKQPNGSKGSSIVKDKDKERHVPSIKKQQQEAARREAA 96
           L+V  L++ +  E+E+    +K+ +P G+  + +   K K  +        ++     AA
Sbjct: 58  LEVRNLKRKLQAELEEVRSLIKRLEPQGNNFAPVPNKKLKTAN------GGKKGGVHGAA 117

Query: 97  AAKRMQELMRQFGTILRQISQHKWAWPFMQPVDVEGLGLHDYYEVIDKPMDFSTIKNQME 156
           A K   ++++    +L ++ +HK  W F  PVDV  LGLHDY+ +I +PMD  T+K ++ 
Sbjct: 118 ADKGTVQILKSCNNLLTKLMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLGTVKTRLS 177

Query: 157 AKDGTGYKNVREICSDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQL 208
               + YK+  E   DVRL F NAM YN    DV+ MA+ LL  FEEKW+ L
Sbjct: 178 K---SLYKSPLEFAEDVRLTFNNAMLYNPVGHDVYHMAEILLNLFEEKWVPL 220

[Close]

BLAST of Lsi02G017080 vs. NCBI nr
Match: gi|659131394|ref|XP_008465663.1| (PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE1 [Cucumis melo])

HSP 1 Score: 493.0 bits (1268), Expect = 3.6e-136
Identity = 256/265 (96.60%), Postives = 258/265 (97.36%), Query Frame = 1


Query: 7   MDAADARNFGVGDTVHAEVEGFRHQVDEIFLKVDRLEQSVNEIEQFYLTLKKKQPNGSKG 66
           MD AD RNF VGDTVH EV+GFRHQVDEIFLKVDRLEQ+VNEIEQFYLTLKKKQPNGSKG
Sbjct: 1   MDVADGRNFVVGDTVHTEVDGFRHQVDEIFLKVDRLEQNVNEIEQFYLTLKKKQPNGSKG 60

Query: 67  SSIVKDKDKERHVPSIKKQQQEAARREAAAAKRMQELMRQFGTILRQISQHKWAWPFMQP 126
           SSIVKDKDKERHVPSIKKQQQEAARREAAAAKRMQELMRQFGTILRQISQHKWAWPFMQP
Sbjct: 61  SSIVKDKDKERHVPSIKKQQQEAARREAAAAKRMQELMRQFGTILRQISQHKWAWPFMQP 120

Query: 127 VDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDER 186
           VDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDER
Sbjct: 121 VDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDER 180

Query: 187 SDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKMARDISN 246
           SDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKMARDISN
Sbjct: 181 SDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKMARDISN 240

Query: 247 EIYEVDTQLEELRELVVQNCRFILT 272
           EIYEVD QLEELRELVVQNCR I T
Sbjct: 241 EIYEVDMQLEELRELVVQNCRKIST 265

[Close]

BLAST of Lsi02G017080 vs. NCBI nr
Match: gi|449452116|ref|XP_004143806.1| (PREDICTED: transcription factor GTE1 [Cucumis sativus])

HSP 1 Score: 490.3 bits (1261), Expect = 2.4e-135
Identity = 254/265 (95.85%), Postives = 257/265 (96.98%), Query Frame = 1


Query: 7   MDAADARNFGVGDTVHAEVEGFRHQVDEIFLKVDRLEQSVNEIEQFYLTLKKKQPNGSKG 66
           MD AD RNF VGDTVH EV+GFRHQVDEIFLKVDRLEQ+VNEIEQFYLTLKKKQPNG+KG
Sbjct: 1   MDVADGRNFVVGDTVHTEVDGFRHQVDEIFLKVDRLEQNVNEIEQFYLTLKKKQPNGNKG 60

Query: 67  SSIVKDKDKERHVPSIKKQQQEAARREAAAAKRMQELMRQFGTILRQISQHKWAWPFMQP 126
           SSIVKDKDKERHVPSIKKQQQEAARREAAA KRMQELMRQFGTILRQISQHKWAWPFMQP
Sbjct: 61  SSIVKDKDKERHVPSIKKQQQEAARREAAATKRMQELMRQFGTILRQISQHKWAWPFMQP 120

Query: 127 VDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDER 186
           VDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDER
Sbjct: 121 VDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDER 180

Query: 187 SDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKMARDISN 246
           SDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKMARDISN
Sbjct: 181 SDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKMARDISN 240

Query: 247 EIYEVDTQLEELRELVVQNCRFILT 272
           EIYEVD QLEELRELVVQNCR I T
Sbjct: 241 EIYEVDMQLEELRELVVQNCRKIST 265

[Close]

BLAST of Lsi02G017080 vs. NCBI nr
Match: gi|802732978|ref|XP_012086513.1| (PREDICTED: transcription factor GTE6 [Jatropha curcas])

HSP 1 Score: 411.8 bits (1057), Expect = 1.1e-111
Identity = 207/248 (83.47%), Postives = 233/248 (93.95%), Query Frame = 1


Query: 24  EVEGFRHQVDEIFLKVDRLEQSVNEIEQFYLTLKKKQPNGSKGSSIVKDKDKERHVPSIK 83
           EVEGF+++VDE+F KVD+LEQ VNE+EQFYL + KKQ  GSKGSSIVK+KDKE+HVPSI+
Sbjct: 25  EVEGFKNRVDELFNKVDKLEQRVNEVEQFYLNISKKQQTGSKGSSIVKEKDKEKHVPSIR 84

Query: 84  KQQQEAARREAAAAKRMQELMRQFGTILRQISQHKWAWPFMQPVDVEGLGLHDYYEVIDK 143
           KQQQ+A++REAAA+KRMQELMRQFGTILRQI+QHKWAWPFMQPVDV+GLGLHDYYEVIDK
Sbjct: 85  KQQQDASKREAAASKRMQELMRQFGTILRQITQHKWAWPFMQPVDVKGLGLHDYYEVIDK 144

Query: 144 PMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 203
           PMDFSTIKNQMEAKDGTGYKNVREIC+DVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK
Sbjct: 145 PMDFSTIKNQMEAKDGTGYKNVREICADVRLVFKNAMKYNDERSDVHVMAKTLLAKFEEK 204

Query: 204 WLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKMARDISNEIYEVDTQLEELRELVV 263
           WLQLLPKVTEEEKRRE EEAEA LDMQLAQ+A  AKMAR++SNEIY++D  L+ELR++VV
Sbjct: 205 WLQLLPKVTEEEKRREVEEAEAQLDMQLAQQAVHAKMARELSNEIYDIDMHLDELRDMVV 264

Query: 264 QNCRFILT 272
           Q CR + T
Sbjct: 265 QKCRKMST 272

[Close]

BLAST of Lsi02G017080 vs. NCBI nr
Match: gi|566182300|ref|XP_002311109.2| (DNA-binding bromodomain-containing family protein [Populus trichocarpa])

HSP 1 Score: 404.1 bits (1037), Expect = 2.2e-109
Identity = 215/274 (78.47%), Postives = 237/274 (86.50%), Query Frame = 1


Query: 1   MNQIDPMDAADARNFGVGDTVHAEVEGFRHQVDEIFLKVDRLEQSVNEIEQFYL--TLKK 60
           M  I P    D+ N  + ++  AE EGF+H VDEI  KVD+LEQ VNE+EQFY   T KK
Sbjct: 1   MEAISP-SIVDSGNLPIRNS-DAEAEGFKHSVDEILQKVDKLEQRVNEVEQFYSKNTSKK 60

Query: 61  KQPNGSKG-SSIVKDKDKERHVPSIKKQQQEAARREAAAAKRMQELMRQFGTILRQISQH 120
           +Q   SKG SS VKDKDKERH+PSI+KQQQ+A++REAAAAKRMQELMRQFGTILRQI+QH
Sbjct: 61  QQSGSSKGGSSTVKDKDKERHIPSIRKQQQDASKREAAAAKRMQELMRQFGTILRQITQH 120

Query: 121 KWAWPFMQPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFK 180
           KWAWPFMQPVDV+GLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYK+VREIC+DVRLVFK
Sbjct: 121 KWAWPFMQPVDVKGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKSVREICADVRLVFK 180

Query: 181 NAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQ 240
           NAMKYNDERSDVHVMAKTLL KFEEKWLQ LPKVTEEEKRRE+EEAEA LDMQLAQEAA 
Sbjct: 181 NAMKYNDERSDVHVMAKTLLGKFEEKWLQFLPKVTEEEKRREEEEAEAQLDMQLAQEAAH 240

Query: 241 AKMARDISNEIYEVDTQLEELRELVVQNCRFILT 272
           AKMARD+ NE+YEVD  LEELRE+VVQ CR + T
Sbjct: 241 AKMARDLGNELYEVDMHLEELREMVVQKCRKMST 272

[Close]

BLAST of Lsi02G017080 vs. NCBI nr
Match: gi|566192212|ref|XP_002315289.2| (hypothetical protein POPTR_0010s22600g [Populus trichocarpa])

HSP 1 Score: 403.3 bits (1035), Expect = 3.8e-109
Identity = 209/252 (82.94%), Postives = 228/252 (90.48%), Query Frame = 1


Query: 23  AEVEGFRHQVDEIFLKVDRLEQSVNEIEQFYLTLKKKQPNGSK---GSSIVKDKDKERHV 82
           A+ EGF+H VDEIF KVD+LEQ +N +EQFYL + KKQ +GS    GSSIVKDKDKERHV
Sbjct: 21  ADTEGFKHSVDEIFQKVDKLEQRMNGVEQFYLDISKKQQSGSSKGGGSSIVKDKDKERHV 80

Query: 83  PSIKKQQQEAARREAAAAKRMQELMRQFGTILRQISQHKWAWPFMQPVDVEGLGLHDYYE 142
            SI+KQQQ+A++REAAAAKRMQELMRQFGTILRQI+QHKWAWPFMQPVDV+GL LHDYYE
Sbjct: 81  TSIRKQQQDASKREAAAAKRMQELMRQFGTILRQITQHKWAWPFMQPVDVKGLRLHDYYE 140

Query: 143 VIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDERSDVHVMAKTLLAK 202
           VIDKPMDFSTIKNQMEAKDGTGYKNVREI +DVRLVFKNAMKYNDERSDVHVMAKTLL K
Sbjct: 141 VIDKPMDFSTIKNQMEAKDGTGYKNVREISADVRLVFKNAMKYNDERSDVHVMAKTLLGK 200

Query: 203 FEEKWLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKMARDISNEIYEVDTQLEELR 262
           FEEKWLQLLPKVTEEEKRREDEE EA LDMQLAQEAA AKMARD+SNE+YEVD  LEELR
Sbjct: 201 FEEKWLQLLPKVTEEEKRREDEEVEAKLDMQLAQEAAHAKMARDLSNELYEVDMHLEELR 260

Query: 263 ELVVQNCRFILT 272
           ++VVQ CR + T
Sbjct: 261 DIVVQKCRKMST 272

The following BLAST results are available for this feature:

BLAST of Lsi02G017080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GTE6_ARATH	5.2e-74	60.98	Transcription factor GTE6 OS=Arabidopsis thaliana GN=GTE6 PE=2 SV=1	[more]
GTE1_ARATH	1.2e-67	53.56	Transcription factor GTE1 OS=Arabidopsis thaliana GN=GTE1 PE=2 SV=1	[more]
GTE2_ARATH	1.5e-20	30.58	Transcription factor GTE2 OS=Arabidopsis thaliana GN=GTE2 PE=2 SV=2	[more]
GTE4_ARATH	9.6e-20	35.71	Transcription factor GTE4 OS=Arabidopsis thaliana GN=GTE4 PE=2 SV=1	[more]
GTE3_ARATH	4.0e-18	34.88	Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana GN=GTE3 PE=1 SV...	[more]

BLAST of Lsi02G017080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNN0_CUCSA	1.6e-135	95.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G494370 PE=4 SV=1	[more]
A0A067K1T8_JATCU	7.5e-112	83.47	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23955 PE=4 SV=1	[more]
B9HLP1_POPTR	1.6e-109	78.47	DNA-binding bromodomain-containing family protein OS=Populus trichocarpa GN=POPT...	[more]
B9HU40_POPTR	2.7e-109	82.94	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s22600g PE=4 SV=2	[more]
F6HNI4_VITVI	5.0e-108	78.28	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g03950 PE=4 SV=...	[more]

BLAST of Lsi02G017080 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G52280.2	3.9e-72	62.07	general transcription factor group E6	[more]
AT2G34900.1	7.0e-69	53.56	Transcription factor GTE6	[more]
AT5G10550.1	8.3e-22	30.58	global transcription factor group E2	[more]
AT1G06230.1	5.4e-21	35.71	global transcription factor group E4	[more]
AT1G73150.1	2.3e-19	34.88	global transcription factor group E3	[more]

BLAST of Lsi02G017080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131394\|ref\|XP_008465663.1\|	3.6e-136	96.60	PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE1 [Cucumis melo]	[more]
gi\|449452116\|ref\|XP_004143806.1\|	2.4e-135	95.85	PREDICTED: transcription factor GTE1 [Cucumis sativus]	[more]
gi\|802732978\|ref\|XP_012086513.1\|	1.1e-111	83.47	PREDICTED: transcription factor GTE6 [Jatropha curcas]	[more]
gi\|566182300\|ref\|XP_002311109.2\|	2.2e-109	78.47	DNA-binding bromodomain-containing family protein [Populus trichocarpa]	[more]
gi\|566192212\|ref\|XP_002315289.2\|	3.8e-109	82.94	hypothetical protein POPTR_0010s22600g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001487	Bromodomain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0042967	acyl-carrier-protein biosynthetic process
biological_process	GO:0016573	histone acetylation
biological_process	GO:0007165	signal transduction
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0000123	histone acetyltransferase complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004402	histone acetyltransferase activity
molecular_function	GO:0043531	ADP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G017080.1	Lsi02G017080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001487	Bromodomain	PRINTS	PR00503	BROMODOMAIN	coord: 134..150 score: 6.5E-16coord: 118..131 score: 6.5E-16coord: 171..190 score: 6.5
IPR001487	Bromodomain	GENE3D	G3DSA:1.20.920.10		coord: 86..224 score: 1.7
IPR001487	Bromodomain	PFAM	PF00439	Bromodomain	coord: 109..194 score: 1.1
IPR001487	Bromodomain	SMART	SM00297	bromo_6	coord: 96..209 score: 1.0
IPR001487	Bromodomain	PROFILE	PS50014	BROMODOMAIN_2	coord: 115..190 score: 18
IPR001487	Bromodomain	unknown	SSF47370	Bromodomain	coord: 95..214 score: 2.09
None	No IPR available	PANTHER	PTHR22880	FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS	coord: 43..280 score: 1.1E
None	No IPR available	PANTHER	PTHR22880:SF163	TRANSCRIPTION FACTOR GTE1	coord: 43..280 score: 1.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi02G017080	Csa5G494370	Cucumber (Chinese Long) v2	culsiB347
Lsi02G017080	CSPI05G16820	Wild cucumber (PI 183967)	cpilsiB351
Lsi02G017080	Cucsa.275600	Cucumber (Gy14) v1	cgylsiB448
Lsi02G017080	CmaCh15G004430	Cucurbita maxima (Rimu)	cmalsiB272
Lsi02G017080	CmaCh04G025940	Cucurbita maxima (Rimu)	cmalsiB651
Lsi02G017080	CmoCh04G027150	Cucurbita moschata (Rifu)	cmolsiB640
Lsi02G017080	CmoCh15G004510	Cucurbita moschata (Rifu)	cmolsiB261
Lsi02G017080	Cla004735	Watermelon (97103) v1	lsiwmB170
Lsi02G017080	MELO3C002885	Melon (DHL92) v3.5.1	lsimeB162
Lsi02G017080	ClCG09G020540	Watermelon (Charleston Gray)	lsiwcgB155
Lsi02G017080	MELO3C002885.2	Melon (DHL92) v3.6.1	lsimedB171
Lsi02G017080	Cla97C09G181960	Watermelon (97103) v2	lsiwmbB208
Lsi02G017080	Bhi06G000568	Wax gourd	lsiwgoB212
Lsi02G017080	Cp4.1LG01g24210	Cucurbita pepo (Zucchini)	cpelsiB336
Lsi02G017080	Cp4.1LG13g09770	Cucurbita pepo (Zucchini)	cpelsiB141
Lsi02G017080	CsGy5G016580	Cucumber (Gy14) v2	cgyblsiB318
Lsi02G017080	Carg02394	Silver-seed gourd	carlsiB232
Lsi02G017080	Carg04542	Silver-seed gourd	carlsiB623
Lsi02G017080	CsaV3_5G025830	Cucumber (Chinese Long) v3	cuclsiB370

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None