Lsi02G016930 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G016930
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_12
Location	chr02 : 22714438 .. 22721097 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTTAAGAAAGGATTACAAAAGAAAACTAATGACTGAGTAAATAGTGAAACGGCTGCCGTAGATGGAGGAGCGAGACAATTGAATCTTTTGAATTATAATTATGTTTTAAATTATAGGAATTCAATTTTGTCACACTCCCAAATATTACATAAAAAAACAAACCTTTTTTAGATTAAATTCTAGGTTAAAAAAACATTTGGTTCATCAACTTTCTTGAGGTAAAAATTTAGTCTCTAAAGTATATATTTATAACAATTTAATCTCTATACTTATAAATTTATGACAATTTAATCTCTATACTTATAAATTTATAACAATTTAGTTTCTATCATGAAAAATTTCATCAAAATTAAGTGTTAATTTTTTTTTATTTGTAATTTATAAAAAAAGTATCCGATCAATTTATTAACCTACTGGTATAGTTTTTTTTAAAATTAAAATTCTACGAAAATTTTGAAGGACTAAGTTGCTACAAATTTAAAAATATTGAGGCAAAATTATTACTAAATTTTATATCTAAAATGTCAATATGTTTCCGTCTCTCGATGATTCGGGAAAGGATAAATGTTGTAAAATAATACAGAAAGAAAAATAAAGAAAAAGATTATGTGCACCTCATGCAAAAAGGAAGGAGACTAAACTAAAAAACATGATAAAATAAGAGAAATATTTGGACCATTTTGCTGTCTAATCATAATTTGTCATACGACAACTCTTATAATATGTCTTATAATATAAAGAATAAGATTTATCACCATTTGAAGAGAGATAAGAATAATGACTCTGTTTGAGGGTAGGGATCCTTTACAAGTTTGGCTTCCAAAATTTCAACTTTGTATTTGCTTTCTCTAAATTTTTAAAAGTGTCTATAATTAGTTTTCCTTAAACTTTAAAATATTTAGAGGGTGTTTAGGGTGAGAAGATAAGATGAGTTGAAATATGAACGACTATTGTTTGAGAGGCCAACTTTGTATACCATCAATATTTTATATCATGTTCACCAATAGTGTACTCAGCCCTCATCACGACCGATGCTTTGTTGCTCAATTCTGGTGACCACCTCGGATGGCCAACTCCAACTACTACCTCTGACGGCCAACTTCGACAACCATCTCCACTGACCAACTCTCACAACCATTGTTTTGTTGACGCTCGTGATATAAAACGGTCAATAAAACCTTAATATAAAACTTAAAAATAACTATTATTTAAAAAAATATATATATAAAATATCAATAAATGTTTATATTTAAGTTTCACATAAAATTGTCAACAAAAACATCTTTGTTGAGGTAAGTTCCGTCAAAACGTTGAATTTTTTATTTTTTTTTATTAGTTCACTAGTATTTTATAGTCCTTTTTAAAAATTTAAAATTAATAAAATCACTTTTATCATGTAAGAAATCAAATAAACTTGTATCTAAAAGTAATTTTGAGAAAAAATTGTCGGAAACATGAGTTATTTAAAAATTTTAAACACTTTTGAGAAAAAAATTTAAAATAAAAATACTCATGTGTCCAACAAGTTTATTTAATTTTTTATCCCATTTCCCAAAACTCCCAACAAGTGCTTAAAAAATCAATCTATAATTTATTAAAAAAATATATGTAAAATTATTGAATGAAAAAGTTTACAAACATAAATAATCATCGTAAAAACATATTCACACCCATATGAACTACACAGACATGTAAACTCTACGTACATATGATCTCCAGATATATAAACTCAACTCATCGTCCTAAAAAATCCCAAAGTTAAAATATCACTTTGGTCTCGCACATTGAAATTTATTCAAATTTCAAATGCCCAATATTATCTCTTATACTTTCAATAATTTTTAAATTGAGACCCTATACTAGTTTAATTTATTGTTTATTTTTTCAAAAGCAGTTTATTATCTATTAGTATTTTTATTATAAATTGTGGCAACATATTCACCTATTATATATTTTTTTCATGAAAATTATTATCATTATTGAACCATATTTGATTAGAGAAAGAAATTAATTTGAGGGGACTAAATTTAGATTAAATTGCTCATTTGAAAGTATAAAGACTAAAATTGAACCAAATACCAAAATGATATTTTAACTAATATTTAATAAGTCTTTGAAGTCTCGTTTTTTTCTCTAATAAGTGACATATTTAAAATTTAAAATTAATTGATATATAATATATTTTTTTTTTTCTAAATTCTCAATTTTGTTTCTAATAGATTTCTTGATTTTTTTTTAAAAAAATATTGAATAAATCAATGGCTTTTTAGATCTAAAATTAAAAAGTTCACGAATTTGTTATGCACAAGAATGAAAGTCTAATAATCTATTAAACATATTTTAAAGTAGAATAACTTATTATTGTGCACAAAATTTAAAAATAATTTTTAAAGTTCGATCACGGACTAAATTGGTGTTATATGTATATATTTAAAAAGTTATAAGGGTGAAATACACTCTTAATTCTATATATTTAAATTTAATTTCTATTAGGACATTATGTTTTTAAAACTAATATTTGTCTAGATTTGAATTTAGTTTCTATTTTAATCTTTAAAATTTCAAAATGGAATGTATGCATGCCAAACACACCTTTAATCTCCAAAATTTAAATTATATTAATTCCCATTTATTTATTATCTATGTTAGGCCAGATATTCTATGGATACAAGTTTTTTAATGCTCAAAATTCTTTTTTTTTTTTATTCGAGACCACGAGAGTTGTTTGTTGCGATCTCTATCTTTATACCTGTCATAGGTATTGGTATTTATCCAGATTTTGTTTTCTCACTATCAGTTGACAAGATCGAAGCTATTTTATCTAATTATTTTGCTAGATAGTTTTCATAAAAAAAAAAAAAAAACAGCAATACTATAATAATAATAATAATAAAAAAAAGAAGTCTTTTTTTCTTTTCTTAAGTTAAATAAAAAATGAATGTTATTTATTTTGTTTAAAATTTAAAATTAATTTTGATTAGTCCTTCAAATTTGAACTCAATTTCTAATTAGTCAAGAGTAATAAAAAAGATTATCATCTCACATAAAAATTCATATAATCAAAGTCTAATATTATTGGTCAACTACCACATTTATATAAACTAGTGTTAACTCTACTTGATACTATTCACTTTTGAAATATAAGGACAAAATAAAAATTAAATAAAAATTTAGACGAAAAAATTATTTAATTTTTAGAACTTAAAACTAAAAAAATCTATGTTCAAATGTCTCATATATATATATATATCAAATTATTAACCCGACTTTGTTTGGTTATATTTTAAACTTTTCAAACAATAAATATAAATGTTTTAAAATAATTAATATTCAAACTTATCCCGACCATCTAAAATATGGCAATAAATCCTTACTATCGTAATATCTAATTAATAATTACAAATATGGAATTGCATTAAATGTACATAAATATGTGACCATTTAATACTTGAACTAACCTCTTCTCTTGTGTGTTTTTTTTAGTCTTTTGTAACTGTTTTTTTAATGATGTGTTTTCAAATTATACATAGTTTTGTTATTGTTTTTTTTAGAAAAATTATTCAATACTTTTGAGCTCATTTAGTTAGATATCTACATAAAATACACTTTTAATTTACAAAATTATGTAGGTCGGGCAAGACCAGGTCCTCAAACCTAAACACAAAGGAAGAAGTCCTAATGAAAGAGGTCGAAGGGATTTAGGAAGGGAGTCCGAGAAGAAAGCAGAGAATGTCCGAGTCTTATAAACAAGAGGAGAGAGTAAACGAATTTAAGTAAAAAACTACAAGTTAAGAGTTCAGTTGGCTTTGAACCTCCCACTGACTTAGGCATGATAATGCGTATGACTTACACCCGTGCGATTTGGAGGTTGACGCTTCTTAAATACAAATTTTATCGTTATTATGCAAGTAGTGTAATTTAATTGTCCCAAATTTAACATATTGAGTTTCTAATATTTTAAAATTAACATGTCTTGAATATAAATAAAATTCTTGAATATATTAAAATCTTTTTTTTTTGTGGGGTGACCTTGGTAAGAATATATATATATATTCATTTTTTTTTTTTTTTTTGTGAATTCTCTCTTCTTCCTCTCTCTTTCTCGTCCCATGCGGTAAACTTTATTATATTTTCTTTGTTCACACTAAAAAAAATTGTCACATTCTCTTTAAATTAGAGAGTAAATTATTGACTACTTTGACATAATGTAAAATATATTTTCTTTTGAGATTAGAAGAAGAAGGTCAATGTCTATATTCAATAAACTATCACTTTATCCATTTAGAAACAAAGTAAATGAATTAGTTGTTTTGTTGACAATAAAAGTTTAAGATTGCGACAATAAAAATCTTACAAAGAAAATTTAAGATCAATAAAAACTATTATACTAATGGCTTGTCTTGAACATGTGAACAAGTCGTGTAGTTCAATATTAACATATAATTATCTTTTTTATAAAACTTTTAAACTTTCAATGTTTTGTTTAATAGCACGTCTTAGAGTAAAATAAAATAAAATTAAATAAGTCTAAAAGTCTAAGAGTGTAAACATAAAGCTTACAAAAAAAAGTCAAATAAGTCTTAAAAATATAAAAGAAAAATTATGATAGGTGACAACTTTTAATGATAAAAATAGAGGATGTCGCATATATTTTTAAAAATGTAGATATAAAAGTAAAATCAACATAATCTATTAGACACTAAGGTTGAAACTTCAAGAATATACATATACGTTTTCTAAAAAAAACTTATAATTAGAACTATTAGAACATAATTATAAATGTTTTTTTTTTATAAAGTACAATATCTAAAATAAAAAATTTAAATCTTTAACCGTTTACTTTGTGAATATATGACTCAACTTATAAATTTAAGGTTAAATTACAAATTTGGATCCTATGAATGGCAAGAAATTAATAAATAGTCTCTAAAAAATTATTTATAAAGATTTTATATTAATTCTTAAGATTATTTGATTGACGATCAGATTCTGTTTTATGTTTTTCAAATTCTGAATTGTTTGACCGACCAATAGAATTTTGTTTCTAAAAACTATTTTCTGAAAACAATATTTATATATTTTTATTGTATACATATTTTGAAGTTTAAATTGTAAAATCTAGAACTATATTAAATAAATATAAAACTTTTAGAAATACGATATGTAATGTTATAAATTCAATTCTTTTTTTCAAAATTAAAATATGTATTATGTCATGTATATAATATTAAAAAATAATAATTATACAAATTTCTTTTACATAAAACACGTTTATAAATAAATTAATAATAGTTTAACGACAACTAATTTGATGATTTATAAATAAATTATCAAATATAATTTTTTAAAATTAGAATCTAATTTCACAATAAAAAACCACATATCTAAAAATATGAAATATCATATCCTACCAAACACATCTTAATTTATCTCGATTTAAAATTTTCTCTCTCTTACATGCAACGAGTATATATAATACAGCCAACCACATTACTCGGACTCTAGGGATAATCTCTCTATTATATGGCAAGTTTTACTTGCCAAAAACTTTAAACACAAAGGCAACTTTTCTTGGAAGCCCTAGTTTGTAAATAATGTTAATGGAGTTTGCCTTCTTTTTCTACAACAAAAACAAACATTCACAACTCTCTATTGCATCGTTTCATCCAAATCTTAAACTCCCTCAATGGTGACTCTTCAATCTCCTTAAATACCAACCCAACTCATAATTTTTTTTCACCTTTTTTTTTTAATTAGATTAGATGGCTTCCTCGTCCTCGTCCCCAGATATTTACATGGTAACACAAGAGGAATTCAACATGTTTCACACTATCGACCGAACCCTTTTCAGTCGAATGGTTTTTTCACTCGGGCGAGACGGAAACGAGTCGGTTCGAGTCATGGGATTGTGGCTTTGGCTTGAACAAAATGGTGAAGAGTTTAATTTGGTTTATAAAATGTTGGGTTTTCCCGACGCTTTGATTGATGCTCTCTCGGATGAAGCCGTCATGTCGTTGGCTTGTATAGAAAACGACAAATTTCCATTTGAACCGGATTCGACCGTCGATATTCCGCTCATTCAACACGTTTCTAAAACCCCGGTTTCCCTCCGGTTCTTCCACGAAAACCGGCTCGGAATCCTCCGTGGCGTTACCAAGATTTGTAACGATATCTGCCATAGAGCCTTTCACGATATACTCCATGCGGTTGAAACCCAGCGCGTGCTTTCACGCGCCGCCGCTACATCCATTCCGACGTTCGGCGGCGGCGGCCGGGGAAGATCCTTTGCTGCGACTCCGGCGAGTAAACTTGTTGTACCGAGTTTTGGGTTTGTCGGTTTCAGGGGAGAGGGGTCGACGACGGCGGCGATTGAGAGTGGAATTAGTGGTTTAAAGTTGAAAAGTGGGAAGGAAGAAGGGGAGGAAGTTCCGGCGGATGAGAGAACGATTTTTCTGACCTTCTCGAAAGGATACCCAATTTCTGAAGACGAAGTTAGAGACTATTTTGGCAGGTTTTTTATTATTATTATTATTATTTATTATAATAATTATTATTTTTTTATCTTCCCAATATATCTCTCTATATTCCTCTGCATGTCGAAAATTTTGTCAATATTTCTAGATTCTAGCGAAGAGTCAGAGATTTTCTTCATGA

mRNA sequence

ATGGATGTCGGGCAAGACCAGGTCCTCAAACCTAAACACAAAGGAAGAAGTCCTAATGAAAGAGGTCGAAGGGATTTAGGAAGGGAGTCCGAGAAGAAAGCAGAGAATGTCCGAATGGCTTCCTCGTCCTCGTCCCCAGATATTTACATGGTAACACAAGAGGAATTCAACATGTTTCACACTATCGACCGAACCCTTTTCAGTCGAATGGTTTTTTCACTCGGGCGAGACGGAAACGAGTCGGTTCGAGTCATGGGATTGTGGCTTTGGCTTGAACAAAATGGTGAAGAGTTTAATTTGGTTTATAAAATGTTGGGTTTTCCCGACGCTTTGATTGATGCTCTCTCGGATGAAGCCGTCATGTCGTTGGCTTGTATAGAAAACGACAAATTTCCATTTGAACCGGATTCGACCGTCGATATTCCGCTCATTCAACACGTTTCTAAAACCCCGGTTTCCCTCCGGTTCTTCCACGAAAACCGGCTCGGAATCCTCCGTGGCGTTACCAAGATTTGTAACGATATCTGCCATAGAGCCTTTCACGATATACTCCATGCGGTTGAAACCCAGCGCGTGCTTTCACGCGCCGCCGCTACATCCATTCCGACGTTCGGCGGCGGCGGCCGGGGAAGATCCTTTGCTGCGACTCCGGCGAGTAAACTTGTTGTACCGAGTTTTGGGTTTGTCGGTTTCAGGGGAGAGGGGTCGACGACGGCGGCGATTGAGAGTGGAATTAGTGGTTTAAAGTTGAAAAGTGGGAAGGAAGAAGGGGAGGAAGTTCCGGCGGATGAGAGAACGATTTTTCTGACCTTCTCGAAAGGATACCCAATTTCTGAAGACGAAATTCTAGCGAAGAGTCAGAGATTTTCTTCATGA

Coding sequence (CDS)

ATGGATGTCGGGCAAGACCAGGTCCTCAAACCTAAACACAAAGGAAGAAGTCCTAATGAAAGAGGTCGAAGGGATTTAGGAAGGGAGTCCGAGAAGAAAGCAGAGAATGTCCGAATGGCTTCCTCGTCCTCGTCCCCAGATATTTACATGGTAACACAAGAGGAATTCAACATGTTTCACACTATCGACCGAACCCTTTTCAGTCGAATGGTTTTTTCACTCGGGCGAGACGGAAACGAGTCGGTTCGAGTCATGGGATTGTGGCTTTGGCTTGAACAAAATGGTGAAGAGTTTAATTTGGTTTATAAAATGTTGGGTTTTCCCGACGCTTTGATTGATGCTCTCTCGGATGAAGCCGTCATGTCGTTGGCTTGTATAGAAAACGACAAATTTCCATTTGAACCGGATTCGACCGTCGATATTCCGCTCATTCAACACGTTTCTAAAACCCCGGTTTCCCTCCGGTTCTTCCACGAAAACCGGCTCGGAATCCTCCGTGGCGTTACCAAGATTTGTAACGATATCTGCCATAGAGCCTTTCACGATATACTCCATGCGGTTGAAACCCAGCGCGTGCTTTCACGCGCCGCCGCTACATCCATTCCGACGTTCGGCGGCGGCGGCCGGGGAAGATCCTTTGCTGCGACTCCGGCGAGTAAACTTGTTGTACCGAGTTTTGGGTTTGTCGGTTTCAGGGGAGAGGGGTCGACGACGGCGGCGATTGAGAGTGGAATTAGTGGTTTAAAGTTGAAAAGTGGGAAGGAAGAAGGGGAGGAAGTTCCGGCGGATGAGAGAACGATTTTTCTGACCTTCTCGAAAGGATACCCAATTTCTGAAGACGAAATTCTAGCGAAGAGTCAGAGATTTTCTTCATGA

Protein sequence

MDVGQDQVLKPKHKGRSPNERGRRDLGRESEKKAENVRMASSSSSPDIYMVTQEEFNMFHTIDRTLFSRMVFSLGRDGNESVRVMGLWLWLEQNGEEFNLVYKMLGFPDALIDALSDEAVMSLACIENDKFPFEPDSTVDIPLIQHVSKTPVSLRFFHENRLGILRGVTKICNDICHRAFHDILHAVETQRVLSRAAATSIPTFGGGGRGRSFAATPASKLVVPSFGFVGFRGEGSTTAAIESGISGLKLKSGKEEGEEVPADERTIFLTFSKGYPISEDEILAKSQRFSS

Homology

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BLAST of Lsi02G016930 vs. TrEMBL
Match: A0A0A0KU25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G497010 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.3e-89
Identity = 183/254 (72.05%), Postives = 203/254 (79.92%), Query Frame = 1


Query: 39  MASSSSSPDI----YMVTQEEFNMFHTIDRTLFSRMVFSLGRDGNESVRVMGLWLWLEQN 98
           MASSSSS       Y +TQEEFN+FHTIDR+LFSRMVFSLGR+  ESVRVMG WLWLE+ 
Sbjct: 1   MASSSSSLQDTNTNYTITQEEFNLFHTIDRSLFSRMVFSLGREPEESVRVMGFWLWLEKY 60

Query: 99  GEEFNLVYKMLGFPDALIDALSDEAVMSLACIENDKFPFEPDSTVDIPLIQHVSKTPVSL 158
           GEE NLV+KMLG PD L+DAL DEAV+SLACI+NDKFPFEPDST+DIPLIQHVSKTPVSL
Sbjct: 61  GEESNLVHKMLGLPDVLVDALCDEAVISLACIQNDKFPFEPDSTLDIPLIQHVSKTPVSL 120

Query: 159 RFFHENRLGILRGVTKICNDICHRAFHDILHAVETQRVLSRA-AATSIPTF--GGGGRGR 218
           RF H NRL IL GV K+CNDIC RAF DIL  + T+R +SRA AA SIP     GGGRGR
Sbjct: 121 RFVHHNRLEILPGVAKMCNDICRRAFLDILQTLHTRRAISRAPAAVSIPAVQGEGGGRGR 180

Query: 219 SF-AATPASKLVVPSFGFVGFRGEGSTTAAIESGISGLKLKSGKE--EGEEVPADERTIF 278
            F  A P +   VPSFGF+G  GE S TAAI SG+S L+LKSGKE  EGE VPAD+RTIF
Sbjct: 181 VFEGAPPVTNFFVPSFGFLGLGGECS-TAAIRSGMSSLELKSGKEEQEGEVVPADQRTIF 240

Query: 279 LTFSKGYPISEDEI 283
           LTFSKGYPISEDE+
Sbjct: 241 LTFSKGYPISEDEV 253

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BLAST of Lsi02G016930 vs. TrEMBL
Match: B9HLZ3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s04460g PE=4 SV=2)

HSP 1 Score: 195.3 bits (495), Expect = 1.0e-46
Identity = 117/274 (42.70%), Postives = 163/274 (59.49%), Query Frame = 1


Query: 44  SSPDIY--MVTQEEFNMFHTIDRTLFSRMVFSLGRDGNESVRVMGLWLWLEQNGEEFNLV 103
           SSP +   MVT EEF +FHTIDRTL++R++ +L RD  ES++VM LW+WLE+   + NLV
Sbjct: 8   SSPSVLNSMVTPEEFKIFHTIDRTLYTRLIVNLDRDPAESMQVMALWIWLEKEARD-NLV 67

Query: 104 YKMLGFPDALIDALSDEAVMSLACIENDKFPFEPDSTVD-IPLIQHVSKTPVSLRFFHEN 163
            KML  PDALI++L+DEAV+ L CIE D+F F P+S  D +PL Q ++KT +SLRFFH+N
Sbjct: 68  DKMLSLPDALINSLADEAVLCLNCIETDRFHFSPESMNDKVPLTQQLTKTGLSLRFFHDN 127

Query: 164 RLGILRGVTKICNDICHRAFHDILHAVETQRVLSR------------------------- 223
           RLGILR +TKI +++C RAF DI   V  ++   +                         
Sbjct: 128 RLGILRALTKIIDEVCARAFEDISRQVIEKKAAGKGNNIVAENVIGQEGNPLNYYGPAIN 187

Query: 224 ------AAATSIPTFGGGGRGRSFAATPASKLVVPSFGFVGFRGEGSTTAAIESGISGLK 283
                 +AA +   +G G     F A     L       +  + + ++T  I   ++ +K
Sbjct: 188 PVLCYNSAAAAAGVYGLGISTPQFMAPNIGILPAYDPYDLSVQRQITSTENIAGVLNRIK 247

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BLAST of Lsi02G016930 vs. TrEMBL
Match: B9HU11_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s22340g PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.7e-44
Identity = 116/278 (41.73%), Postives = 160/278 (57.55%), Query Frame = 1


Query: 39  MASSSSSPDIY--MVTQEEFNMFHTIDRTLFSRMVFSLGRDGNESVRVMGLWLWLEQNGE 98
           M SSSSS  +   MV+ EEF +FHTIDRTL++R+V  L RD  +S++VM LW+WLE+   
Sbjct: 1   MESSSSSSSVLNPMVSPEEFKIFHTIDRTLYTRLVVKLDRDPADSMQVMALWIWLEREAR 60

Query: 99  EFNLVYKMLGFPDALIDALSDEAVMSLACIENDKFPFEPDSTVD-IPLIQHVSKTPVSLR 158
             NLV +ML  PD LI++L+DEAV+ L CIE D+F F  ++  D IPL Q ++KT  SLR
Sbjct: 61  G-NLVKRMLSLPDTLINSLADEAVLCLNCIETDRFDFSLETMNDEIPLTQQLTKTGFSLR 120

Query: 159 FFHENRLGILRGVTKICNDICHRAFHDILHAVETQRVLSRAAATSIPTFG---------- 218
           FFH+NRLGILR + KI N++C RAF DI   V  ++ ++  +  +    G          
Sbjct: 121 FFHDNRLGILRAIAKITNEVCARAFEDISRQVMERKAVAGGSNVAENVVGQNTNPLNYYG 180

Query: 219 ---------GGGRGRSFAATPASKLVV-PSFGFVGF-----------RGEGSTTAAIESG 278
                           +  T  S+  + P+ G  GF           + +   T  I   
Sbjct: 181 PVINPVLYCNSNAAGVYGQTGISRRFMWPNVGHPGFLPGYDPYDLAFQRQILNTENIAGV 240

Query: 279 ISGLKLKSGKEEGEEVPADERTIFLTFSKGYPISEDEI 283
           ++ LK+ +G ++  EV AD RT+FLTFSKGYPISEDEI
Sbjct: 241 LNRLKISAGDQK--EVQADSRTVFLTFSKGYPISEDEI 275

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BLAST of Lsi02G016930 vs. TrEMBL
Match: A0A068U810_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00017655001 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.2e-37
Identity = 97/236 (41.10%), Postives = 132/236 (55.93%), Query Frame = 1


Query: 51  VTQEEFNMFHTIDRTLFSRMVFSLGRDGNESVRVMGLWLWLEQNG-EEFNLVYKMLGFPD 110
           V  EEFN FH+IDR LF R++ +LGRD +ESV++M  WLWLEQ   +   LV +ML  P 
Sbjct: 16  VNDEEFNSFHSIDRKLFIRLMTNLGRDPSESVQLMAFWLWLEQEVVDNLTLVNQMLSLPA 75

Query: 111 ALIDALSDEAVMSLACIENDKFPFEPDSTVDIPLIQHVSKTPVSLRFFHENRLGILRGVT 170
            L+  L+DE+VM L C+E+D FPF      ++ L+    +  +S ++F+ENR+G+LRGV+
Sbjct: 76  TLMSELADESVMCLKCVESDSFPFGEKDPHELVLLPSFVERNISFQYFYENRIGVLRGVS 135

Query: 171 KICNDICHRAFHDILHAVETQRVLSRAAATSIPTFGGGGRGRSFAATPASKLVVPSFGFV 230
           K+  ++C RAFHD+L                +P           A    S     SFG V
Sbjct: 136 KMIGEVCSRAFHDLL----------------VP-----------AGLKGSSKTSSSFGEV 195

Query: 231 GFRGEGSTTAAIESGIS---GLKLKSGKEEGEEVPADERTIFLTFSKGYPISEDEI 283
           G     S    +E+ +       L    EE +EV  DERTIFLTFSKGYPISE E+
Sbjct: 196 GTISR-SHDQIMENELCHRLDTSLNDLVEENDEVSPDERTIFLTFSKGYPISETEV 223

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BLAST of Lsi02G016930 vs. TrEMBL
Match: A0A0D2S711_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G024800 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.5e-37
Identity = 99/254 (38.98%), Postives = 146/254 (57.48%), Query Frame = 1


Query: 39  MASSSSSPDIYMVTQEEFNMFHTIDRTLFSRMVFSLGRDGNESVRVMGLWLWLEQNG--E 98
           M SSSSS + + ++ EE  +FHTIDR +FSR+V++L R   ES+ VM L+LWLE      
Sbjct: 1   MDSSSSSMN-HTISLEELKLFHTIDRAIFSRLVWNLQRQPFESMHVMALFLWLENYSCTP 60

Query: 99  EFNLVYKMLGFPDALIDALSDEAVMSLACIENDKFPFEP--DSTVDIPLIQHVSKTPVSL 158
             +LVY +  + D LI+AL+DEAV  L C+  D+FPF    D    IPLI+ ++   +SL
Sbjct: 61  GLHLVYNIHPWSDPLINALADEAVQCLICLNTDEFPFSHFHDDKCTIPLIRKLTGNEISL 120

Query: 159 RFFHENRLGILRGVTKICNDICHRAFHDILHAVETQRVLSRAAATSIPTFGGGGRGRSFA 218
           RFFHENR+ I+R +T++  DIC RAF DI+  +    ++        P +     G    
Sbjct: 121 RFFHENRVEIVRRITQLVRDICLRAFDDIMKLIHDPLIM--------PVYSEKKMGN--- 180

Query: 219 ATPASKLVVPSFGFVGFRGEGSTTAAIESGISGLKLKS------GKEEGEEVPADERTIF 278
                + + P+ GF+      +    +  GI  + +KS       K+E ++V AD+RT+F
Sbjct: 181 ----QQNLKPNLGFLIGAQRNNEMEDLWKGIHNINIKSLEENNGKKKENKQVEADDRTVF 238

Query: 279 LTFSKGYPISEDEI 283
           LTFSKGY +SE E+
Sbjct: 241 LTFSKGYSVSEAEV 238

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BLAST of Lsi02G016930 vs. TAIR10
Match: AT5G13620.1 (AT5G13620.1 unknown protein)

HSP 1 Score: 121.3 bits (303), Expect = 9.7e-28
Identity = 86/249 (34.54%), Postives = 122/249 (49.00%), Query Frame = 1


Query: 39  MASSSSSPDIYMVTQEEFNMFHTIDRTLFSRMVFSLGRDGNESVRVMGLWLWLEQNGEEF 98
           MASSSS+     VT++EFN FH  DR LF R V  L RD N+S++VM   L+LE++G   
Sbjct: 1   MASSSSA---VAVTRDEFNAFHKCDRALFRRFVVRLRRDINQSLQVMSFLLYLEKSGLVS 60

Query: 99  NLVYKMLGFPDALIDALSDEAVMSLACIENDKFPF--EPDSTVDIPLIQHVSKTPVSLRF 158
           NL+      PD  I+ ++DE VM L+C+  + F           IPLI  ++   ++L  
Sbjct: 61  NLIVNFNSLPDFFINTVADEVVMCLSCLSYENFSMFVANFGKKIIPLITRMTGEYLTLAV 120

Query: 159 FHENRLGILRGVTKICNDICHRAFHDILHAVETQRVLSRAAATSIPTFGGGGRGRSFAAT 218
            H+NR  IL  + K    IC+ AF DI    E ++V+                       
Sbjct: 121 IHQNRESILLDMKKHLTSICYPAFEDICVQAEKEKVIEDMKHLGF--------------- 180

Query: 219 PASKLVVPSFGFVGFRGE-GSTTAAIESGISGLKLKSGKEEGEEVPADERTIFLTFSKGY 278
             SK V  +     F  E  +TT   + G+          E E+   D+RT+FLTFS+GY
Sbjct: 181 --SKAVHKAGSSSQFLSEQQATTRTSKVGVF--------SEDEQAREDDRTVFLTFSRGY 221

Query: 279 PISEDEILA 285
           P+SE E+ A
Sbjct: 241 PLSEAEVHA 221

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BLAST of Lsi02G016930 vs. TAIR10
Match: AT1G49290.1 (AT1G49290.1 unknown protein)

HSP 1 Score: 115.9 bits (289), Expect = 4.1e-26
Identity = 78/244 (31.97%), Postives = 124/244 (50.82%), Query Frame = 1


Query: 50  MVTQEEFNMFHTIDRTLFSRMVFSLGRDGNESVRVMGLWLWLEQNGEEFNLVYKMLGFPD 109
           +VT++EFN FHTIDRTLFSR+VF+L RD ++S   M   L+LEQ+    +++  ++  P+
Sbjct: 18  VVTRDEFNAFHTIDRTLFSRLVFNLNRDVDQSFLAMCFLLFLEQSSYARDIIAYLVSLPN 77

Query: 110 ALIDALSDEAVMSLACIENDK-----FPFEPDSTVDIPLIQHVSKTPVSLRFFHENRLGI 169
           A +DA+++E  + +  + N +     F  + D    IPL+  ++    +LR  ++ R   
Sbjct: 78  AFVDAVANEIGVCINLLYNVEFASTFFAADNDDNSMIPLLLRITGGKFTLRLINQQRKNF 137

Query: 170 LRGVTKICNDICHRAFHDI---LHAVETQRVLSRAAATSIPTFGGGGRGRSFAATPASKL 229
             GVTK   D+C RAF D+    H +  ++ L+      I          S     +++L
Sbjct: 138 CAGVTKSWTDVCTRAFSDLCETAHRINREKQLALEREKFIEDM--KKLRLSLQQEKSNRL 197

Query: 230 VVPSFGFVG---FRGEGSTTAAIESGISGLKLKSGKEEGEEVPADERTIFLTFSKGYPIS 283
            V           R         E  +   +    KE+   + AD+RT+FLTFSKGYPIS
Sbjct: 198 SVQQVKIASPPPPRPHPPVEDETEKALREKETMEVKEKEGVLAADDRTVFLTFSKGYPIS 257

[Close]

BLAST of Lsi02G016930 vs. TAIR10
Match: AT1G64870.1 (AT1G64870.1 unknown protein)

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-21
Identity = 74/241 (30.71%), Postives = 112/241 (46.47%), Query Frame = 1


Query: 52  TQEEFNMFHTIDRTLFSRMVFSLGRDGNESVRVMGLWLWLEQNGEEFNLVYKMLG-FPDA 111
           T E+ + FH  +R +FS++V  L R   ES+ VM  WLW E  G  F  ++ ++  F D 
Sbjct: 5   TVEQLHAFHAQEREIFSKLVQKLRRPPAESLLVMATWLWFEDFG--FGNIFSIITVFSDL 64

Query: 112 LIDALSDEAVMSLACIENDKFPFEPDSTVDIPLIQHVSKTPVSLRFFHENRLGILRGVTK 171
           LI  L++EAV+   C+E+D+    P+    IPL +   K  +SL+  H +R   + G+  
Sbjct: 65  LIVDLANEAVLCFRCLESDQ---PPNDVSQIPLTERFMKNDISLQIIHNHRYTAITGIKN 124

Query: 172 ICNDICHRAFHDILHAVETQRVLSRAAATSIPTFGGGGRGRSFAATPASKLVVPSFGFVG 231
               IC R F DIL     QRVL  +++             SF       L++P F    
Sbjct: 125 FLTTICSRIFSDIL-----QRVLPSSSS-------------SFITNLRHPLIIPGFPHPT 184

Query: 232 FRGEGSTTAAIESGISGLKLKS--------GKEEGEEVPADERTIFLTFSKGYPISEDEI 284
           F G  +    I +  +     S        G          ERT+FLTFS+G+P+S  E+
Sbjct: 185 F-GSINVLPNIVARDNLPNANSFLFPHGLWGWNANHVATDKERTVFLTFSRGFPVSHAEV 221

[Close]

BLAST of Lsi02G016930 vs. TAIR10
Match: AT3G45200.1 (AT3G45200.1 unknown protein)

HSP 1 Score: 92.0 bits (227), Expect = 6.3e-19
Identity = 73/244 (29.92%), Postives = 109/244 (44.67%), Query Frame = 1


Query: 50  MVTQEEFNMFHTIDRTLFSRMVFSLGRDGNESVRVMGLWLWLEQNGEEFNLVYKMLGFPD 109
           ++  +E ++FH  DR +FS++V    R   ES+ VM  WLWLE  G E N+   +L   D
Sbjct: 3   LLNAQELHVFHAQDREIFSKLVLKFSRPPAESLLVMATWLWLEDFGFE-NIFSIILTLTD 62

Query: 110 ALIDALSDEAVMSLACIENDKFPFEPDSTVDIPLIQHVSKTPVSLRFFHENRLGILRGVT 169
            LI  L+ EAV    C+  +  P        IPL     K  +SL+  ++NR   + G+ 
Sbjct: 63  PLIAGLAYEAVSCFQCLSLNNPPIGR-----IPLTTKYLKKNISLQMIYKNRYSAITGIK 122

Query: 170 KICNDICHRAFHDILHAVETQRVLSRAAATSIPTFGGGGRGRSFAATPASKLVVPSFGFV 229
                +C R F DIL      RVL  ++ +S        R R     P      P FG +
Sbjct: 123 NFLTTVCTRIFTDIL-----LRVLPPSSMSSFDA-----RLRQPLQIPG--FPHPIFGSI 182

Query: 230 G----------FRGEGSTTAAIESGISGLKLKSGKEEGEEVPADERTIFLTFSKGYPISE 284
                      F  + +    I +G+ G        E      ++RT+FLTFS+GYP++ 
Sbjct: 183 NVMPNEVDRDNFSNKNNNLFFIPNGLWGWNANCIATE------NDRTLFLTFSRGYPVTH 222

[Close]

BLAST of Lsi02G016930 vs. TAIR10
Match: AT5G11220.1 (AT5G11220.1 unknown protein)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-12
Identity = 57/209 (27.27%), Postives = 94/209 (44.98%), Query Frame = 1


Query: 85  MGLWLWLEQNGEEFNLVYKMLGFPDALIDALSDEAVMSLACIENDKFPFEPDSTVDIPLI 144
           M  W WLE    + N++  +L   D +I AL++EAV+   C+++ +   +P+    IPL 
Sbjct: 1   MATWFWLEDFFSQ-NILSTILALSDPVIMALANEAVLCFQCLDSAE---QPNDFNQIPLT 60

Query: 145 QHVSKTPVSLRFFHENRLGILRGVTKICNDICHRAFHDILHAVETQRVLSRAAATSIPTF 204
             +    +SL+ FH++R   + G+      +C R F DIL     QR L    ++S P  
Sbjct: 61  AELLAKDISLQIFHKHRYSAIAGIRNFLTTVCSRIFSDIL-----QRALP--PSSSYP-- 120

Query: 205 GGGGRGRSFAATPASKLVVPSFGFVGFRGEGSTTAAIESGISGLKLKS-----------G 264
                   F       L++P F    F   GS    +   + G  L +           G
Sbjct: 121 --------FVTRLRHPLIIPGFPHPTF---GSINV-MHDVVVGDNLYNNNLFPCSHGLWG 180

Query: 265 KEEGEEVPADERTIFLTFSKGYPISEDEI 283
                    +ERT+F+TFS+G+P+S+ E+
Sbjct: 181 WNASCIATDNERTMFITFSRGFPVSQAEV 184

[Close]

BLAST of Lsi02G016930 vs. NCBI nr
Match: gi|449452176|ref|XP_004143836.1| (PREDICTED: uncharacterized protein LOC101221230 [Cucumis sativus])

HSP 1 Score: 337.8 bits (865), Expect = 1.9e-89
Identity = 183/254 (72.05%), Postives = 203/254 (79.92%), Query Frame = 1


Query: 39  MASSSSSPDI----YMVTQEEFNMFHTIDRTLFSRMVFSLGRDGNESVRVMGLWLWLEQN 98
           MASSSSS       Y +TQEEFN+FHTIDR+LFSRMVFSLGR+  ESVRVMG WLWLE+ 
Sbjct: 1   MASSSSSLQDTNTNYTITQEEFNLFHTIDRSLFSRMVFSLGREPEESVRVMGFWLWLEKY 60

Query: 99  GEEFNLVYKMLGFPDALIDALSDEAVMSLACIENDKFPFEPDSTVDIPLIQHVSKTPVSL 158
           GEE NLV+KMLG PD L+DAL DEAV+SLACI+NDKFPFEPDST+DIPLIQHVSKTPVSL
Sbjct: 61  GEESNLVHKMLGLPDVLVDALCDEAVISLACIQNDKFPFEPDSTLDIPLIQHVSKTPVSL 120

Query: 159 RFFHENRLGILRGVTKICNDICHRAFHDILHAVETQRVLSRA-AATSIPTF--GGGGRGR 218
           RF H NRL IL GV K+CNDIC RAF DIL  + T+R +SRA AA SIP     GGGRGR
Sbjct: 121 RFVHHNRLEILPGVAKMCNDICRRAFLDILQTLHTRRAISRAPAAVSIPAVQGEGGGRGR 180

Query: 219 SF-AATPASKLVVPSFGFVGFRGEGSTTAAIESGISGLKLKSGKE--EGEEVPADERTIF 278
            F  A P +   VPSFGF+G  GE S TAAI SG+S L+LKSGKE  EGE VPAD+RTIF
Sbjct: 181 VFEGAPPVTNFFVPSFGFLGLGGECS-TAAIRSGMSSLELKSGKEEQEGEVVPADQRTIF 240

Query: 279 LTFSKGYPISEDEI 283
           LTFSKGYPISEDE+
Sbjct: 241 LTFSKGYPISEDEV 253

[Close]

BLAST of Lsi02G016930 vs. NCBI nr
Match: gi|659127178|ref|XP_008463565.1| (PREDICTED: uncharacterized protein LOC103501679 [Cucumis melo])

HSP 1 Score: 238.0 bits (606), Expect = 2.0e-59
Identity = 129/174 (74.14%), Postives = 141/174 (81.03%), Query Frame = 1


Query: 121 MSLACIENDKFPFEPDSTVDIPLIQHVSKTPVSLRFFHENRLGILRGVTKICNDICHRAF 180
           MSLACIENDKFPFEPDSTVD+PLIQHVSKTPVSLRFFH NRLGILRGVTK+CNDIC+RAF
Sbjct: 1   MSLACIENDKFPFEPDSTVDVPLIQHVSKTPVSLRFFHLNRLGILRGVTKMCNDICNRAF 60

Query: 181 HDILHAVETQRVLSRA-AATSIPTF-GGGGRGRSF--AATPASKLVVPSFGFVGFRGEGS 240
            DIL A+ T+R +SRA AA SIP   G GGRGR F   A P SK  VPS GF+G RGEGS
Sbjct: 61  LDILQALHTRRAISRAPAAVSIPAVQGEGGRGRVFEGRAPPVSKFFVPSIGFLGLRGEGS 120

Query: 241 TTAAIESGISGLKLKSGK--------EEGEEVPADERTIFLTFSKGYPISEDEI 283
            TAAI SG+S L+LKSGK        EEGE +PAD+RTIFLTFSKGYPISEDE+
Sbjct: 121 -TAAIRSGMSSLELKSGKEEEEEEGEEEGEAIPADQRTIFLTFSKGYPISEDEV 173

[Close]

BLAST of Lsi02G016930 vs. NCBI nr
Match: gi|566182329|ref|XP_002311116.2| (hypothetical protein POPTR_0008s04460g [Populus trichocarpa])

HSP 1 Score: 195.3 bits (495), Expect = 1.5e-46
Identity = 117/274 (42.70%), Postives = 163/274 (59.49%), Query Frame = 1


Query: 44  SSPDIY--MVTQEEFNMFHTIDRTLFSRMVFSLGRDGNESVRVMGLWLWLEQNGEEFNLV 103
           SSP +   MVT EEF +FHTIDRTL++R++ +L RD  ES++VM LW+WLE+   + NLV
Sbjct: 8   SSPSVLNSMVTPEEFKIFHTIDRTLYTRLIVNLDRDPAESMQVMALWIWLEKEARD-NLV 67

Query: 104 YKMLGFPDALIDALSDEAVMSLACIENDKFPFEPDSTVD-IPLIQHVSKTPVSLRFFHEN 163
            KML  PDALI++L+DEAV+ L CIE D+F F P+S  D +PL Q ++KT +SLRFFH+N
Sbjct: 68  DKMLSLPDALINSLADEAVLCLNCIETDRFHFSPESMNDKVPLTQQLTKTGLSLRFFHDN 127

Query: 164 RLGILRGVTKICNDICHRAFHDILHAVETQRVLSR------------------------- 223
           RLGILR +TKI +++C RAF DI   V  ++   +                         
Sbjct: 128 RLGILRALTKIIDEVCARAFEDISRQVIEKKAAGKGNNIVAENVIGQEGNPLNYYGPAIN 187

Query: 224 ------AAATSIPTFGGGGRGRSFAATPASKLVVPSFGFVGFRGEGSTTAAIESGISGLK 283
                 +AA +   +G G     F A     L       +  + + ++T  I   ++ +K
Sbjct: 188 PVLCYNSAAAAAGVYGLGISTPQFMAPNIGILPAYDPYDLSVQRQITSTENIAGVLNRIK 247

[Close]

BLAST of Lsi02G016930 vs. NCBI nr
Match: gi|764639393|ref|XP_011470593.1| (PREDICTED: uncharacterized protein LOC105353273 [Fragaria vesca subsp. vesca])

HSP 1 Score: 187.2 bits (474), Expect = 4.1e-44
Identity = 106/247 (42.91%), Postives = 154/247 (62.35%), Query Frame = 1


Query: 39  MASSSSSPDIYMVTQEEFNMFHTIDRTLFSRMVFSLGRDGNESVRVMGLWLWLEQNGEEF 98
           MA  S   D   V++EEFN+FH+IDR LF+RMVF LG D  ES ++M LW+WLE NG+EF
Sbjct: 1   MAFFSFPSDNVPVSREEFNLFHSIDRKLFTRMVFGLGLDPAESAQIMALWMWLEHNGKEF 60

Query: 99  NLVYK-MLGFPDALIDALSDEAVMSLACIENDKFPFEP--DSTVDIPLIQHVSKTPVSLR 158
           NLVYK ++  P+ L++A+++E+V+ L CI++D+F   P  D   DIP++Q +SK+ V+L+
Sbjct: 61  NLVYKTLMTLPNTLLNAMAEESVLVLICIQSDEF-HRPNLDINTDIPILQAISKSGVTLK 120

Query: 159 FFHENRLGILRGVTKICNDICHRAFHDILHAVETQRVLSRAAATSIPTFGGGGRGRSFAA 218
           FFH+NR GI++GV+ +  D+C +AF D+L           A++++ P F       S   
Sbjct: 121 FFHDNRTGIMQGVSALFKDVCLKAFQDLLIPPHPYNPTMGASSSAAPQFRNPAVNSSATL 180

Query: 219 TPASKLVVPSFGFVGFRGEGSTTAAIESGISGLKLKSGKEEGEEVPADERTIFLTFSKGY 278
              S  +   +     R        +E  +S L L + + E +EV   ERTIFLTFSKGY
Sbjct: 181 QNLSGGLFHPYDLAVQR--EVLNKEMEEVLSRLTLDNIEGEDQEVEPHERTIFLTFSKGY 240

Query: 279 PISEDEI 283
           PISE+EI
Sbjct: 241 PISENEI 244

[Close]

BLAST of Lsi02G016930 vs. NCBI nr
Match: gi|224112943|ref|XP_002316340.1| (hypothetical protein POPTR_0010s22340g [Populus trichocarpa])

HSP 1 Score: 186.8 bits (473), Expect = 5.3e-44
Identity = 116/278 (41.73%), Postives = 160/278 (57.55%), Query Frame = 1


Query: 39  MASSSSSPDIY--MVTQEEFNMFHTIDRTLFSRMVFSLGRDGNESVRVMGLWLWLEQNGE 98
           M SSSSS  +   MV+ EEF +FHTIDRTL++R+V  L RD  +S++VM LW+WLE+   
Sbjct: 1   MESSSSSSSVLNPMVSPEEFKIFHTIDRTLYTRLVVKLDRDPADSMQVMALWIWLEREAR 60

Query: 99  EFNLVYKMLGFPDALIDALSDEAVMSLACIENDKFPFEPDSTVD-IPLIQHVSKTPVSLR 158
             NLV +ML  PD LI++L+DEAV+ L CIE D+F F  ++  D IPL Q ++KT  SLR
Sbjct: 61  G-NLVKRMLSLPDTLINSLADEAVLCLNCIETDRFDFSLETMNDEIPLTQQLTKTGFSLR 120

Query: 159 FFHENRLGILRGVTKICNDICHRAFHDILHAVETQRVLSRAAATSIPTFG---------- 218
           FFH+NRLGILR + KI N++C RAF DI   V  ++ ++  +  +    G          
Sbjct: 121 FFHDNRLGILRAIAKITNEVCARAFEDISRQVMERKAVAGGSNVAENVVGQNTNPLNYYG 180

Query: 219 ---------GGGRGRSFAATPASKLVV-PSFGFVGF-----------RGEGSTTAAIESG 278
                           +  T  S+  + P+ G  GF           + +   T  I   
Sbjct: 181 PVINPVLYCNSNAAGVYGQTGISRRFMWPNVGHPGFLPGYDPYDLAFQRQILNTENIAGV 240

Query: 279 ISGLKLKSGKEEGEEVPADERTIFLTFSKGYPISEDEI 283
           ++ LK+ +G ++  EV AD RT+FLTFSKGYPISEDEI
Sbjct: 241 LNRLKISAGDQK--EVQADSRTVFLTFSKGYPISEDEI 275

The following BLAST results are available for this feature:

BLAST of Lsi02G016930 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi02G016930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KU25_CUCSA	1.3e-89	72.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G497010 PE=4 SV=1	[more]
B9HLZ3_POPTR	1.0e-46	42.70	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s04460g PE=4 SV=2	[more]
B9HU11_POPTR	3.7e-44	41.73	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s22340g PE=4 SV=1	[more]
A0A068U810_COFCA	1.2e-37	41.10	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00017655001 PE=4 SV=1	[more]
A0A0D2S711_GOSRA	7.5e-37	38.98	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G024800 PE=4 SV=1	[more]

BLAST of Lsi02G016930 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13620.1	9.7e-28	34.54	unknown protein	[more]
AT1G49290.1	4.1e-26	31.97	unknown protein	[more]
AT1G64870.1	1.0e-21	30.71	unknown protein	[more]
AT3G45200.1	6.3e-19	29.92	unknown protein	[more]
AT5G11220.1	1.5e-12	27.27	unknown protein	[more]

BLAST of Lsi02G016930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452176\|ref\|XP_004143836.1\|	1.9e-89	72.05	PREDICTED: uncharacterized protein LOC101221230 [Cucumis sativus]	[more]
gi\|659127178\|ref\|XP_008463565.1\|	2.0e-59	74.14	PREDICTED: uncharacterized protein LOC103501679 [Cucumis melo]	[more]
gi\|566182329\|ref\|XP_002311116.2\|	1.5e-46	42.70	hypothetical protein POPTR_0008s04460g [Populus trichocarpa]	[more]
gi\|764639393\|ref\|XP_011470593.1\|	4.1e-44	42.91	PREDICTED: uncharacterized protein LOC105353273 [Fragaria vesca subsp. vesca]	[more]
gi\|224112943\|ref\|XP_002316340.1\|	5.3e-44	41.73	hypothetical protein POPTR_0010s22340g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G016930.1	Lsi02G016930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33527	FAMILY NOT NAMED	coord: 39..282 score: 1.1
None	No IPR available	PANTHER	PTHR33527:SF4	F13F21.27 PROTEIN-RELATED	coord: 39..282 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi02G016930	Csa5G497010	Cucumber (Chinese Long) v2	culsiB347
Lsi02G016930	CSPI05G16990	Wild cucumber (PI 183967)	cpilsiB351
Lsi02G016930	Cucsa.275770	Cucumber (Gy14) v1	cgylsiB448
Lsi02G016930	CmaCh04G026040	Cucurbita maxima (Rimu)	cmalsiB651
Lsi02G016930	CmoCh04G027250	Cucurbita moschata (Rifu)	cmolsiB640
Lsi02G016930	Cla004721	Watermelon (97103) v1	lsiwmB170
Lsi02G016930	MELO3C025499	Melon (DHL92) v3.5.1	lsimeB162
Lsi02G016930	ClCG09G020410	Watermelon (Charleston Gray)	lsiwcgB155
Lsi02G016930	MELO3C025499.2	Melon (DHL92) v3.6.1	lsimedB171
Lsi02G016930	Cla97C09G181790	Watermelon (97103) v2	lsiwmbB208
Lsi02G016930	Bhi06G000587	Wax gourd	lsiwgoB212
Lsi02G016930	Cp4.1LG01g24260	Cucurbita pepo (Zucchini)	cpelsiB336
Lsi02G016930	CsGy5G016730	Cucumber (Gy14) v2	cgyblsiB318
Lsi02G016930	Carg04535	Silver-seed gourd	carlsiB623
Lsi02G016930	CsaV3_5G026010	Cucumber (Chinese Long) v3	cuclsiB370

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G016930	Bottle gourd (USVL1VR-Ls)	lsilsiB067
Lsi02G016930	Bottle gourd (USVL1VR-Ls)	lsilsiB102
Lsi02G016930	Cucumber (Gy14) v1	cgylsiB061
Lsi02G016930	Cucumber (Gy14) v1	cgylsiB274
Lsi02G016930	Cucurbita maxima (Rimu)	cmalsiB272
Lsi02G016930	Cucurbita maxima (Rimu)	cmalsiB646
Lsi02G016930	Cucurbita maxima (Rimu)	cmalsiB798
Lsi02G016930	Cucurbita moschata (Rifu)	cmolsiB261
Lsi02G016930	Cucurbita moschata (Rifu)	cmolsiB634
Lsi02G016930	Cucurbita moschata (Rifu)	cmolsiB637
Lsi02G016930	Cucurbita moschata (Rifu)	cmolsiB784
Lsi02G016930	Cucurbita pepo (Zucchini)	cpelsiB141
Lsi02G016930	Cucurbita pepo (Zucchini)	cpelsiB333
Lsi02G016930	Cucurbita pepo (Zucchini)	cpelsiB334
Lsi02G016930	Wild cucumber (PI 183967)	cpilsiB356
Lsi02G016930	Cucumber (Chinese Long) v2	culsiB352
Lsi02G016930	Melon (DHL92) v3.5.1	lsimeB169
Lsi02G016930	Watermelon (Charleston Gray)	lsiwcgB166
Lsi02G016930	Watermelon (97103) v1	lsiwmB182
Lsi02G016930	Cucumber (Gy14) v2	cgyblsiB253
Lsi02G016930	Melon (DHL92) v3.6.1	lsimedB178
Lsi02G016930	Silver-seed gourd	carlsiB232
Lsi02G016930	Cucumber (Chinese Long) v3	cuclsiB374
Lsi02G016930	Watermelon (97103) v2	lsiwmbB168