Lsi02G016890 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G016890
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	FGFR1 oncogene partner, putative
Location	chr02 : 22662453 .. 22665119 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTTTTTGGTGGAAGGAAGTTTGGAAATCCAATGGATTTGATTTGGGGGGGGAGTGTGTTGGGGAACTACGATAGTGTATAAATTATTAGGTCTATTGACTACCCTATTTTGCATGTCCTTGGGTGCAGCGTTTTAATTATTTTCACTTAGGTTGGAAAATCTTGAATTAAAGTATATTTGTATGTTTATTTTATACCTTCTTCGTCTATAATAATAAATGGTTTTATTTTATTTTATTTTTAGGAACTAAAACTATTGAAAAATATGAAAGATTATACGTGTTATATATTTAACTAATTTGATATTACATGCATGTTTTAATTTATGCATAAGAGAATTTAAATTAAATTGATTGAATAGAATAACTTTATATTAAATTTTAATTTATACTAATTAATTATCATTGTACATTAACTCTTAATAGCTAAAATACATCATGCTATTAAAATAATATAAATAAAACATTATAAAAAGGACAAATTTAAACCTTCAAATTATTAATTTTTATTTTGATTACCTACTTAATTTCAAACTTTTATTTTATTTATATCACTGTATCATTTGATTACTTACTCAGTTTCAAGTTTCAATTTAAACCAAACTAATACTTTTAAATTTGTTTGAATTAACTATTTAATATATTCCTGTTTCAACTAATAGTAGGAGTATTATGGTCCCATTGTTTTAGTTAAAAATCTTTGATTTTTTCATTTAGCCATTTTTACAAATTGAAATGGCTACTTCTAAGTTGATGTTTAAAATTAACTATTTCCATTATTATAGCCCTAACAAGTAAAGATTAAGGGGGCGTTTTGGAGCACATAGTTGAGTTAAGTTGGTAATTATTATAGGTAGAGCGTAATTGGAGGAGTTGACACGAATAACGAAGTGAGAAATGTGACTTAATGCTAATAACGAGGTAATAAACCTCTTATTATTCTTAGAAATCCTTCGAATGACTATAGGTCAAATGCTAAATTATATAATATAATATAATTAGAATGCATTTGTAAATTTAGTTACACAGTAACTTTTATTAAAAATCCATCAATCAAGGTAGTAGAGAATGCAGGAAGCATATGAGGACTCCGACGCGTCACAAATTAAATCTAGTGTGAACACTTAGCCTCTCCAAGTCTTATTATAACAACCCCATATTGCCTTTTTATGAAATTTATGACATTGCATGGACGACATAGGAAGGAGAGAGATTAAGAATAATGAAATAACTAATGGACACTTAATTGAAAGTTGACTATGATCGTTCGAAGTCTAATTCGATGAAATATTAAATTTTAAAATTCAAATCAAAATTTGAAGATGTATGAATTTGGAGAATTCTCAAACTAAAAACTGATATTAATGCTAAAATATCCACATGGCAAACGTGAAGGAAGGTCAATTTTACAAGTATTGGGCCTGAGGCCCAAATCCAAATGATGAAAGAGGAACAGCCCAGTTAGGTAAACGTGAAGGAAGGTCAATTTTACAAGTATTGGGCCTAAGGCTCACATCCAAATGATGAAAAGAGGAACAGCTCAATTAGGTAAACGTGAAAGAAGGTCAATTTTAGAAGTATTGGGCCTGAGGCCCACATCCCAAAGGAGGAAAGAAGAACGGCCCAGGTTAGGCAAACGTGAAGGAAACTGCAGCCTTGAATGGAGCCCACACCCACAAGCTCCGATAACAGTGACGATCACGATTTCACGATTCATTTTTTGACGCTCTTTTGCTTTGCTATGCTTTGCTTTCATCCTCCATTTTTGCTCCCTTTGATGCCCACATCTCCGTAGTTGATGTTATTACGCGCCTTCACGCAGAGCTCCGGAAAATCGTCACAGCAAAGCCAAGGCCGAAGGATTGCTCAAACATGGACGATTATACCAGAGAAATGATGGACTTGAAGACCCTTGTCACTCGGACTCTCGAGAAGAAGGGCGTCCTCGCTAAGATCCGTGTAATTTTTTTTTTTTACTTTTTCATCTCATTCTTGTATTTTATGCTGTTGTTTCCTTCAAATTTCTTCTATTCTGGCCTATACGGATCTTTCATTGTTATTCTTTGTACTGAATTTCTTGGATTTTTTGGGGTTCTTGTGTTGCTGGTTGGTGAGACTGAATGTGGTAGGTTAAGGCTAGGGTTTTGTTTCTACTTTTAGATTTAGAAGGACGTAGGACGGAGGAGACTGAATCTTTCTCTGTCTCTCTATTTTCTTTAGTGTTAAGCTGGTTGTAATTATAATGCAATTATTTGGATAAACTGAATCATCATCCCCTTGGATCTTGGACTGGTTGAGAAGCATCTACTTCTTGTGTTATGTTGTGTCTCCATTATTTATTCTTAAGATATCTTTGGCATCGATCTGATGTTAGGGGTCTTTAGTATTTACTACTTTTGAAGGAATATTTAATTATGTTCATAAAAAATCGTTCACCCTTCCTTCCTTTCTTTTTTCCCCTCACCTTTTCTTTTCTTTTTCTTTTGGTTATATGCCAGGCTGAACTTAGAGCTAGTGTATTCGAGGCAATTGAAGAAGAGGATCGTGTTATTGAGAAAGATGATGGATTGCCGCCTGCTTTACTTGGTAGTTGCAATGATCGAGCAAAGCAGCTTCATGCTTCACCATCAGGTTCGATTACAAAAATTTTTCTCCCCTCTTGA

mRNA sequence

ATGAAGCTCCGGAAAATCGTCACAGCAAAGCCAAGGCCGAAGGATTGCTCAAACATGGACGATTATACCAGAGAAATGATGGACTTGAAGACCCTTGTCACTCGGACTCTCGAGAAGAAGGGCGTCCTCGCTAAGATCCGTGCTGAACTTAGAGCTAGTGTATTCGAGGCAATTGAAGAAGAGGATCGTGTTATTGAGAAAGATGATGGATTGCCGCCTGCTTTACTTGGTAGTTGCAATGATCGAGCAAAGCAGCTTCATGCTTCACCATCAGGTTCGATTACAAAAATTTTTCTCCCCTCTTGA

Coding sequence (CDS)

ATGAAGCTCCGGAAAATCGTCACAGCAAAGCCAAGGCCGAAGGATTGCTCAAACATGGACGATTATACCAGAGAAATGATGGACTTGAAGACCCTTGTCACTCGGACTCTCGAGAAGAAGGGCGTCCTCGCTAAGATCCGTGCTGAACTTAGAGCTAGTGTATTCGAGGCAATTGAAGAAGAGGATCGTGTTATTGAGAAAGATGATGGATTGCCGCCTGCTTTACTTGGTAGTTGCAATGATCGAGCAAAGCAGCTTCATGCTTCACCATCAGGTTCGATTACAAAAATTTTTCTCCCCTCTTGA

Protein sequence

MKLRKIVTAKPRPKDCSNMDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGSCNDRAKQLHASPSGSITKIFLPS

Homology

[Close]

BLAST of Lsi02G016890 vs. Swiss-Prot
Match: TON1B_ARATH (Protein TONNEAU 1b OS=Arabidopsis thaliana GN=TON1B PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.2e-32
Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 1


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIE ++GLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIENNEGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRA+QLHASPSG +
Sbjct: 61 CNDRARQLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. Swiss-Prot
Match: TON1A_ARATH (Protein TONNEAU 1a OS=Arabidopsis thaliana GN=TON1A PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.3e-31
Identity = 68/76 (89.47%), Postives = 73/76 (96.05%), Query Frame = 1


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIE ++G PPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIENNEGPPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRA++LHASPSG +
Sbjct: 61 CNDRARKLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. TrEMBL
Match: A0A0A0KS40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G503600 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.5e-32
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRAKQLHASPSG +
Sbjct: 61 CNDRAKQLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. TrEMBL
Match: A9PCW4_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.3e-32
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKD+GLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDEGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRAKQLHASPSG +
Sbjct: 61 CNDRAKQLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. TrEMBL
Match: V4SNN9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032445mg PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.3e-32
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKD+GLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDEGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRAKQLHASPSG +
Sbjct: 61 CNDRAKQLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. TrEMBL
Match: B9HU03_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s22270g PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.3e-32
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKD+GLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDEGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRAKQLHASPSG +
Sbjct: 61 CNDRAKQLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. TrEMBL
Match: A0A067FP14_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024581mg PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.3e-32
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKD+GLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDEGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRAKQLHASPSG +
Sbjct: 61 CNDRAKQLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. TAIR10
Match: AT3G55005.1 (AT3G55005.1 tonneau 1b (TON1b))

HSP 1 Score: 140.2 bits (352), Expect = 7.0e-34
Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 1


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIE ++GLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIENNEGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRA+QLHASPSG +
Sbjct: 61 CNDRARQLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. TAIR10
Match: AT3G55000.1 (AT3G55000.1 tonneau family protein)

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-32
Identity = 68/76 (89.47%), Postives = 73/76 (96.05%), Query Frame = 1


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIE ++G PPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIENNEGPPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRA++LHASPSG +
Sbjct: 61 CNDRARKLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. NCBI nr
Match: gi|449464208|ref|XP_004149821.1| (PREDICTED: protein TONNEAU 1a isoform X1 [Cucumis sativus])

HSP 1 Score: 146.7 bits (369), Expect = 2.1e-32
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRAKQLHASPSG +
Sbjct: 61 CNDRAKQLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. NCBI nr
Match: gi|778703217|ref|XP_011655337.1| (PREDICTED: protein TONNEAU 1b isoform X2 [Cucumis sativus])

HSP 1 Score: 146.7 bits (369), Expect = 2.1e-32
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRAKQLHASPSG +
Sbjct: 61 CNDRAKQLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. NCBI nr
Match: gi|659127146|ref|XP_008463549.1| (PREDICTED: protein TONNEAU 1a-like isoform X1 [Cucumis melo])

HSP 1 Score: 146.7 bits (369), Expect = 2.1e-32
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRAKQLHASPSG +
Sbjct: 61 CNDRAKQLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. NCBI nr
Match: gi|659127148|ref|XP_008463551.1| (PREDICTED: protein TONNEAU 1b-like isoform X2 [Cucumis melo])

HSP 1 Score: 146.7 bits (369), Expect = 2.1e-32
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRAKQLHASPSG +
Sbjct: 61 CNDRAKQLHASPSGRL 76

[Close]

BLAST of Lsi02G016890 vs. NCBI nr
Match: gi|118484693|gb|ABK94217.1| (unknown [Populus trichocarpa])

HSP 1 Score: 145.2 bits (365), Expect = 6.2e-32
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1


Query: 19 MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDDGLPPALLGS 78
          MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKD+GLPPALLGS
Sbjct: 1  MDDYTREMMDLKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVIEKDEGLPPALLGS 60

Query: 79 CNDRAKQLHASPSGSI 95
          CNDRAKQLHASPSG +
Sbjct: 61 CNDRAKQLHASPSGRL 76

The following BLAST results are available for this feature:

BLAST of Lsi02G016890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TON1B_ARATH	1.2e-32	92.11	Protein TONNEAU 1b OS=Arabidopsis thaliana GN=TON1B PE=1 SV=1	[more]
TON1A_ARATH	2.3e-31	89.47	Protein TONNEAU 1a OS=Arabidopsis thaliana GN=TON1A PE=1 SV=1	[more]

BLAST of Lsi02G016890 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS40_CUCSA	1.5e-32	97.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G503600 PE=4 SV=1	[more]
A9PCW4_POPTR	4.3e-32	96.05	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]
V4SNN9_9ROSI	4.3e-32	96.05	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032445mg PE=4 SV=1	[more]
B9HU03_POPTR	4.3e-32	96.05	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s22270g PE=4 SV=1	[more]
A0A067FP14_CITSI	4.3e-32	96.05	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024581mg PE=4 SV=1	[more]

BLAST of Lsi02G016890 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G55005.1	7.0e-34	92.11	tonneau 1b (TON1b)	[more]
AT3G55000.1	1.3e-32	89.47	tonneau family protein	[more]

BLAST of Lsi02G016890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464208\|ref\|XP_004149821.1\|	2.1e-32	97.37	PREDICTED: protein TONNEAU 1a isoform X1 [Cucumis sativus]	[more]
gi\|778703217\|ref\|XP_011655337.1\|	2.1e-32	97.37	PREDICTED: protein TONNEAU 1b isoform X2 [Cucumis sativus]	[more]
gi\|659127146\|ref\|XP_008463549.1\|	2.1e-32	97.37	PREDICTED: protein TONNEAU 1a-like isoform X1 [Cucumis melo]	[more]
gi\|659127148\|ref\|XP_008463551.1\|	2.1e-32	97.37	PREDICTED: protein TONNEAU 1b-like isoform X2 [Cucumis melo]	[more]
gi\|118484693\|gb\|ABK94217.1\|	6.2e-32	96.05	unknown [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G016890.1	Lsi02G016890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15431	FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEIN	coord: 19..92 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G016890	Bottle gourd (USVL1VR-Ls)	lsilsiB067
Lsi02G016890	Bottle gourd (USVL1VR-Ls)	lsilsiB102
Lsi02G016890	Cucumber (Gy14) v1	cgylsiB061
Lsi02G016890	Cucumber (Gy14) v1	cgylsiB274
Lsi02G016890	Cucumber (Gy14) v1	cgylsiB448
Lsi02G016890	Cucurbita maxima (Rimu)	cmalsiB272
Lsi02G016890	Cucurbita maxima (Rimu)	cmalsiB646
Lsi02G016890	Cucurbita maxima (Rimu)	cmalsiB651
Lsi02G016890	Cucurbita maxima (Rimu)	cmalsiB798
Lsi02G016890	Cucurbita moschata (Rifu)	cmolsiB261
Lsi02G016890	Cucurbita moschata (Rifu)	cmolsiB634
Lsi02G016890	Cucurbita moschata (Rifu)	cmolsiB637
Lsi02G016890	Cucurbita moschata (Rifu)	cmolsiB640
Lsi02G016890	Cucurbita moschata (Rifu)	cmolsiB784
Lsi02G016890	Cucurbita pepo (Zucchini)	cpelsiB141
Lsi02G016890	Cucurbita pepo (Zucchini)	cpelsiB333
Lsi02G016890	Cucurbita pepo (Zucchini)	cpelsiB334
Lsi02G016890	Cucurbita pepo (Zucchini)	cpelsiB336
Lsi02G016890	Wild cucumber (PI 183967)	cpilsiB356
Lsi02G016890	Wild cucumber (PI 183967)	cpilsiB351
Lsi02G016890	Cucumber (Chinese Long) v2	culsiB347
Lsi02G016890	Cucumber (Chinese Long) v2	culsiB352
Lsi02G016890	Melon (DHL92) v3.5.1	lsimeB162
Lsi02G016890	Melon (DHL92) v3.5.1	lsimeB169
Lsi02G016890	Watermelon (Charleston Gray)	lsiwcgB155
Lsi02G016890	Watermelon (Charleston Gray)	lsiwcgB166
Lsi02G016890	Watermelon (97103) v1	lsiwmB170
Lsi02G016890	Watermelon (97103) v1	lsiwmB182
Lsi02G016890	Cucumber (Gy14) v2	cgyblsiB253
Lsi02G016890	Cucumber (Gy14) v2	cgyblsiB318
Lsi02G016890	Melon (DHL92) v3.6.1	lsimedB171
Lsi02G016890	Melon (DHL92) v3.6.1	lsimedB178
Lsi02G016890	Silver-seed gourd	carlsiB232
Lsi02G016890	Silver-seed gourd	carlsiB623
Lsi02G016890	Cucumber (Chinese Long) v3	cuclsiB370
Lsi02G016890	Cucumber (Chinese Long) v3	cuclsiB374
Lsi02G016890	Watermelon (97103) v2	lsiwmbB168
Lsi02G016890	Watermelon (97103) v2	lsiwmbB208
Lsi02G016890	Wax gourd	lsiwgoB212