Lsi02G016460 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi02G016460
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionB-cell receptor-associated protein 31
Locationchr02 : 22277501 .. 22277794 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCAAGTTGTGTTGAAGCTTGCATTGAGCGAAATGGCCATAATTTTGGCTCTGTTGTTCAGAACTCCATTCAGAAATTTGATAGTCAAAGGATTGGACAGATTGAAGCAGGGGAGAGGCCCTTTGGTGGTTAAGTCTGTTGCCGCCACCATGCTGGTCGTCTTTGCCTCAGCTCTTTACAATGCGACGAAAATCGGCCGACGAACGGCGGAGGGCGGCTTCATCAACCAGACTGACGAGATTCTCATGGCGCAGCGCCTTCTCGAAGCCTCCATGATCGGTGAGCTTTAA

mRNA sequence

ATGATTCAAGTTGTGTTGAAGCTTGCATTGAGCGAAATGGCCATAATTTTGGCTCTGTTGTTCAGAACTCCATTCAGAAATTTGATAGTCAAAGGATTGGACAGATTGAAGCAGGGGAGAGGCCCTTTGGTGGTTAAGTCTGTTGCCGCCACCATGCTGGTCGTCTTTGCCTCAGCTCTTTACAATGCGACGAAAATCGGCCGACGAACGGCGGAGGGCGGCTTCATCAACCAGACTGACGAGATTCTCATGGCGCAGCGCCTTCTCGAAGCCTCCATGATCGGTGAGCTTTAA

Coding sequence (CDS)

ATGATTCAAGTTGTGTTGAAGCTTGCATTGAGCGAAATGGCCATAATTTTGGCTCTGTTGTTCAGAACTCCATTCAGAAATTTGATAGTCAAAGGATTGGACAGATTGAAGCAGGGGAGAGGCCCTTTGGTGGTTAAGTCTGTTGCCGCCACCATGCTGGTCGTCTTTGCCTCAGCTCTTTACAATGCGACGAAAATCGGCCGACGAACGGCGGAGGGCGGCTTCATCAACCAGACTGACGAGATTCTCATGGCGCAGCGCCTTCTCGAAGCCTCCATGATCGGTGAGCTTTAA

Protein sequence

MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIGEL
BLAST of Lsi02G016460 vs. TrEMBL
Match: A0A0A0KNS5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G515050 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.9e-30
Identity = 76/95 (80.00%), Postives = 81/95 (85.26%), Query Frame = 1

Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MIQV LKL L+EMA+ILALLF+ P RNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL
Sbjct: 1  MIQVALKLVLAEMALILALLFKNPLRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          YNA  I RR AE G +NQTDEIL+A RLLE   IG
Sbjct: 61 YNAAAINRRVAEAGILNQTDEILVAYRLLETYTIG 95

BLAST of Lsi02G016460 vs. TrEMBL
Match: M5X389_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa014571mg PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-22
Identity = 58/94 (61.70%), Postives = 72/94 (76.60%), Query Frame = 1

Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MIQ++  L L+EMA+IL+LLFRTP R L++ GLDR KQGRGPLV KSV  T+LV F+S L
Sbjct: 1  MIQILFALVLAEMALILSLLFRTPLRTLVIVGLDRSKQGRGPLVAKSVGGTVLVFFSSTL 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMI 95
          Y    + +R  E GF+N TDE+LMA RLLEAS+I
Sbjct: 61 YGVFSVQKRLTEAGFVNPTDEVLMAHRLLEASLI 94

BLAST of Lsi02G016460 vs. TrEMBL
Match: B9SVA3_RICCO (Bcr-associated protein, bap, putative OS=Ricinus communis GN=RCOM_1303620 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 8.6e-22
Identity = 55/95 (57.89%), Postives = 75/95 (78.95%), Query Frame = 1

Query: 1   MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
           MI  +  L  +EM +IL LLFR+P R L++ G+D+LK+GRGPLV K+VAAT+LVVF++ L
Sbjct: 106 MISTLFSLVFAEMGVILTLLFRSPLRKLLIVGIDQLKRGRGPLVAKTVAATLLVVFSAVL 165

Query: 61  YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
           Y+  +I RR+ E G +N TDE+LMAQRLLEAS++G
Sbjct: 166 YSVMEIRRRSMESGVMNSTDEVLMAQRLLEASLMG 200

BLAST of Lsi02G016460 vs. TrEMBL
Match: A0A151U293_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_006052 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-21
Identity = 57/95 (60.00%), Postives = 72/95 (75.79%), Query Frame = 1

Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MIQ++  L + ++A IL L F  P R L+VKGLD LKQGRGPLV K+VAATMLVVF S +
Sbjct: 1  MIQLLFTLLMIQVAFILILSFANPIRKLVVKGLDLLKQGRGPLVTKTVAATMLVVFGSTM 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          Y  TKI +R+ + G +N TDE+LMA RLLEAS++G
Sbjct: 61 YTITKIQKRSKDAGIVNPTDEVLMAHRLLEASLLG 95

BLAST of Lsi02G016460 vs. TrEMBL
Match: A0A067F7E3_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g045614mg PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.3e-21
Identity = 56/95 (58.95%), Postives = 73/95 (76.84%), Query Frame = 1

Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MI ++ K+  +EMA+IL LLFR P R  ++ GLDRLK+GRGPLV KSV AT+LVV  SA+
Sbjct: 1  MIYLLFKIVFTEMALILTLLFRNPLRKFVIMGLDRLKRGRGPLVAKSVGATVLVVLCSAV 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          Y+A +I RR  EGG IN T+E+LMA  LL+AS++G
Sbjct: 61 YSAMEIQRRAREGGAINPTEEVLMANLLLQASLMG 95

BLAST of Lsi02G016460 vs. TAIR10
Match: AT5G42570.1 (AT5G42570.1 B-cell receptor-associated 31-like)

HSP 1 Score: 90.9 bits (224), Expect = 4.7e-19
Identity = 44/95 (46.32%), Postives = 69/95 (72.63%), Query Frame = 1

Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MI ++  +  +EMA+IL LLF+TP R LI+   DR+K+GRGP+VVK++  T+ VV  S++
Sbjct: 1  MIHLLYTVIFAEMALILLLLFKTPLRKLIILTFDRIKRGRGPVVVKTIGTTVFVVLLSSI 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          Y+   I RR+ +G  +N TD++L ++ LLEAS++G
Sbjct: 61 YSLVNIQRRSEDGAVLNPTDQVLASKHLLEASLMG 95

BLAST of Lsi02G016460 vs. TAIR10
Match: AT1G11905.1 (AT1G11905.1 B-cell receptor-associated protein 31-like )

HSP 1 Score: 87.8 bits (216), Expect = 4.0e-18
Identity = 41/95 (43.16%), Postives = 71/95 (74.74%), Query Frame = 1

Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          M Q++  + L E+ +I+AL F+TP R L++  LDR K+GRGP+V+++V+AT++V+  +++
Sbjct: 1  MQQLLFAVVLFEVVVIMALSFKTPIRKLLIMSLDRSKRGRGPVVIQTVSATVIVLLVTSV 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          YN   I +R  E G +N TDE++MA+ LLE++++G
Sbjct: 61 YNMMGIQKRWIEDGVVNPTDEVIMAKHLLESTLMG 95

BLAST of Lsi02G016460 vs. TAIR10
Match: AT3G20450.1 (AT3G20450.1 B-cell receptor-associated protein 31-like )

HSP 1 Score: 81.6 bits (200), Expect = 2.8e-16
Identity = 46/96 (47.92%), Postives = 64/96 (66.67%), Query Frame = 1

Query: 1   MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
           M Q++  +   E  +IL L F TP R ++VK LD  KQGR PLV K+VAATMLV+F S +
Sbjct: 5   MFQLLFTIVTIEAVLILTLGFGTPARRVVVKLLDLSKQGRAPLVAKTVAATMLVLFGSVM 64

Query: 61  YNATKIGRRTAE-GGFINQTDEILMAQRLLEASMIG 96
           ++  +I  R +E GG  N TD+++ A RLLEA ++G
Sbjct: 65  FSTIQIHTRVSESGGVANSTDQVMFANRLLEAFLMG 100

BLAST of Lsi02G016460 vs. TAIR10
Match: AT5G48660.1 (AT5G48660.1 B-cell receptor-associated protein 31-like )

HSP 1 Score: 65.5 bits (158), Expect = 2.1e-11
Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 1

Query: 1  MIQVVLKLALSEMAIILALLFRT-PFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASA 60
          MIQ++  +   E AI   LL +  P R L++K LD++K G+GP  VK++A TM V+  S 
Sbjct: 1  MIQLLFLVLFVEGAIAFLLLIKIGPLRELVIKSLDQMKMGKGPATVKTIAGTMSVILFSN 60

Query: 61 LYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          L +  KI  + A+ G ++  D++L    LLEAS++G
Sbjct: 61 LMSIVKIQNKGAKLGTMSPMDQVLWRTHLLEASLLG 96

BLAST of Lsi02G016460 vs. TAIR10
Match: AT3G07190.1 (AT3G07190.1 B-cell receptor-associated protein 31-like )

HSP 1 Score: 61.6 bits (148), Expect = 3.0e-10
Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 1

Query: 1  MIQVVLKLALSEMAIILALLFRT-PFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASA 60
          MIQ++  +   E AI   LL +  P R L++K LD+LK G+ P  +K++A TM V+  S 
Sbjct: 1  MIQLLFLVLFVEGAIAFLLLVKIGPLRELVMKSLDQLKLGKRPATLKTIAGTMSVILLSN 60

Query: 61 LYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          L N  KI  + A+ G ++  D++L    LLEAS++G
Sbjct: 61 LMNIIKIQNKGAKLGTMSPMDQVLWRTHLLEASLMG 96

BLAST of Lsi02G016460 vs. NCBI nr
Match: gi|778703405|ref|XP_011655362.1| (PREDICTED: uncharacterized protein LOC101213037 isoform X1 [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 5.6e-30
Identity = 76/95 (80.00%), Postives = 81/95 (85.26%), Query Frame = 1

Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MIQV LKL L+EMA+ILALLF+ P RNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL
Sbjct: 1  MIQVALKLVLAEMALILALLFKNPLRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          YNA  I RR AE G +NQTDEIL+A RLLE   IG
Sbjct: 61 YNAAAINRRVAEAGILNQTDEILVAYRLLETYTIG 95

BLAST of Lsi02G016460 vs. NCBI nr
Match: gi|659117981|ref|XP_008458888.1| (PREDICTED: uncharacterized protein LOC103498158 [Cucumis melo])

HSP 1 Score: 138.7 bits (348), Expect = 5.6e-30
Identity = 77/95 (81.05%), Postives = 81/95 (85.26%), Query Frame = 1

Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MIQVVLKL L+EMA+ILALLF+ P RNLIVKGLDRLKQGRGPLV KSVAATMLVVFASAL
Sbjct: 1  MIQVVLKLVLAEMALILALLFKNPLRNLIVKGLDRLKQGRGPLVAKSVAATMLVVFASAL 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          YNA  I  R AEGG +NQTDEILMA RLLE   IG
Sbjct: 61 YNAAAIRGRMAEGGILNQTDEILMAYRLLETYTIG 95

BLAST of Lsi02G016460 vs. NCBI nr
Match: gi|778703408|ref|XP_011655363.1| (PREDICTED: uncharacterized protein LOC101213037 isoform X2 [Cucumis sativus])

HSP 1 Score: 136.0 bits (341), Expect = 3.6e-29
Identity = 75/94 (79.79%), Postives = 80/94 (85.11%), Query Frame = 1

Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MIQV LKL L+EMA+ILALLF+ P RNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL
Sbjct: 1  MIQVALKLVLAEMALILALLFKNPLRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMI 95
          YNA  I RR AE G +NQTDEIL+A RLLE   I
Sbjct: 61 YNAAAINRRVAEAGILNQTDEILVAYRLLETYTI 94

BLAST of Lsi02G016460 vs. NCBI nr
Match: gi|694363786|ref|XP_009361097.1| (PREDICTED: uncharacterized protein LOC103951454 [Pyrus x bretschneideri])

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-23
Identity = 59/95 (62.11%), Postives = 76/95 (80.00%), Query Frame = 1

Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MIQ++  L L+EMA+IL+LLFRTP R L++ GLDR KQGRGPLVVKSV  T+LV F+S +
Sbjct: 1  MIQILFTLVLAEMALILSLLFRTPLRKLVIVGLDRSKQGRGPLVVKSVGGTILVFFSSTI 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          Y+   + +R +E GF+N TDE+LMA RLLEAS+IG
Sbjct: 61 YSVFSVQKRLSEAGFVNPTDEVLMAHRLLEASLIG 95

BLAST of Lsi02G016460 vs. NCBI nr
Match: gi|645240990|ref|XP_008226862.1| (PREDICTED: uncharacterized protein LOC103326424 [Prunus mume])

HSP 1 Score: 116.3 bits (290), Expect = 3.0e-23
Identity = 59/95 (62.11%), Postives = 73/95 (76.84%), Query Frame = 1

Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MIQ++  L L+EMA+IL+LLFRTP R L++ GLDR KQGRGPLV KSV  T+LV F+S L
Sbjct: 1  MIQILFALVLAEMALILSLLFRTPLRTLVIVGLDRSKQGRGPLVAKSVGGTVLVFFSSTL 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          Y    + +R  E GF+N TDE+LMA RLLEAS+IG
Sbjct: 61 YGVFSVQKRLTEAGFVNPTDEVLMAHRLLEASLIG 95

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KNS5_CUCSA3.9e-3080.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G515050 PE=4 SV=1[more]
M5X389_PRUPE1.3e-2261.70Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa014571mg PE=4 S... [more]
B9SVA3_RICCO8.6e-2257.89Bcr-associated protein, bap, putative OS=Ricinus communis GN=RCOM_1303620 PE=4 S... [more]
A0A151U293_CAJCA1.5e-2160.00Uncharacterized protein OS=Cajanus cajan GN=KK1_006052 PE=4 SV=1[more]
A0A067F7E3_CITSI3.3e-2158.95Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g045614mg PE=4 S... [more]
Match NameE-valueIdentityDescription
AT5G42570.14.7e-1946.32 B-cell receptor-associated 31-like[more]
AT1G11905.14.0e-1843.16 B-cell receptor-associated protein 31-like [more]
AT3G20450.12.8e-1647.92 B-cell receptor-associated protein 31-like [more]
AT5G48660.12.1e-1139.58 B-cell receptor-associated protein 31-like [more]
AT3G07190.13.0e-1039.58 B-cell receptor-associated protein 31-like [more]
Match NameE-valueIdentityDescription
gi|778703405|ref|XP_011655362.1|5.6e-3080.00PREDICTED: uncharacterized protein LOC101213037 isoform X1 [Cucumis sativus][more]
gi|659117981|ref|XP_008458888.1|5.6e-3081.05PREDICTED: uncharacterized protein LOC103498158 [Cucumis melo][more]
gi|778703408|ref|XP_011655363.1|3.6e-2979.79PREDICTED: uncharacterized protein LOC101213037 isoform X2 [Cucumis sativus][more]
gi|694363786|ref|XP_009361097.1|1.0e-2362.11PREDICTED: uncharacterized protein LOC103951454 [Pyrus x bretschneideri][more]
gi|645240990|ref|XP_008226862.1|3.0e-2362.11PREDICTED: uncharacterized protein LOC103326424 [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0005783endoplasmic reticulum
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Vocabulary: INTERPRO
TermDefinition
IPR008417BAP29/BAP31
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G016460.1Lsi02G016460.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008417B-cell receptor-associated protein 29/31PANTHERPTHR12701BCR-ASSOCIATED PROTEIN, BAPcoord: 1..95
score: 2.2
NoneNo IPR availablePANTHERPTHR12701:SF17SUBFAMILY NOT NAMEDcoord: 1..95
score: 2.2

The following gene(s) are paralogous to this gene:

None