Lsi02G016450 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G016450
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Cysteine/histidine-rich C1 domain protein
Location	chr02 : 22271687 .. 22272496 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTCTCAACAAAACAATTCAGAGATGGCAACAAAGATGTTTCATACCAAAAGCCACAAGCATCCACTTGAGCTCAAAAACTACATAAAACGATACACCTGTGACGGCTGCAAGGAGGACGGCTTCGGCCCTCGATACCGTTGCGAAAATTGCGATTACGATCTCCATAAACATTGTATGGAAATTACCGCGTCGACTTCCCACGAGTTCTTCCCCGATTCCACCTTCAATTTCCTCACAACCCCACCCAAAGCTTGCCACAAACACTGCAAACGACAATGCGACGCTTGTCGAAAACCGATCAATGGCTTTGTGTACCACTGCAAGAAGCATAACTTGGACCTCCACCCTTGCTGTAGACATCTCAAGAGAAGATATCAAATCAAAGGAGAAGAAGAAAAAGAAGAATTTGAGTTCATTCTCCATAAGAATGTGGAAAAAAAATGCTTGTGGTGCAATAAGAAGAGCCTCAAAGAAGGTGACTACAGCAATGGATGGTCCTATATTTCTAAGTGCGACGAGTACCATATTCATGTGGCTTGTGTCATTGAAATGATTTTGGAAGAATGGAACAAGAAAAGTGACACTATCAACAAAATCAACTACAATGTTAAGGAAGACAACCACAAATCTCTGGCTCTACACAAGGTGAATTTTAAAGAAATTCAAGCTAAAAGGAATGGGAATGGCAAAACTGGGAACAAGTATTGGAGAATCCTCAAGGTTTTCATTAAGACCATTGTTAGTATTCTTCTTGGAGATCCCACCATGGTTCTTGCCTCTTTGTTCCTTGAATTGCTTCCATGA

mRNA sequence

ATGCCTTCTCAACAAAACAATTCAGAGATGGCAACAAAGATGTTTCATACCAAAAGCCACAAGCATCCACTTGAGCTCAAAAACTACATAAAACGATACACCTGTGACGGCTGCAAGGAGGACGGCTTCGGCCCTCGATACCGTTGCGAAAATTGCGATTACGATCTCCATAAACATTGTATGGAAATTACCGCGTCGACTTCCCACGAGTTCTTCCCCGATTCCACCTTCAATTTCCTCACAACCCCACCCAAAGCTTGCCACAAACACTGCAAACGACAATGCGACGCTTGTCGAAAACCGATCAATGGCTTTGTGTACCACTGCAAGAAGCATAACTTGGACCTCCACCCTTGCTGTAGACATCTCAAGAGAAGATATCAAATCAAAGGAGAAGAAGAAAAAGAAGAATTTGAGTTCATTCTCCATAAGAATGTGGAAAAAAAATGCTTGTGGTGCAATAAGAAGAGCCTCAAAGAAGGTGACTACAGCAATGGATGGTCCTATATTTCTAAGTGCGACGAGTACCATATTCATGTGGCTTGTGTCATTGAAATGATTTTGGAAGAATGGAACAAGAAAAGTGACACTATCAACAAAATCAACTACAATGTTAAGGAAGACAACCACAAATCTCTGGCTCTACACAAGGTGAATTTTAAAGAAATTCAAGCTAAAAGGAATGGGAATGGCAAAACTGGGAACAAGTATTGGAGAATCCTCAAGGTTTTCATTAAGACCATTGTTAGTATTCTTCTTGGAGATCCCACCATGGTTCTTGCCTCTTTGTTCCTTGAATTGCTTCCATGA

Coding sequence (CDS)

ATGCCTTCTCAACAAAACAATTCAGAGATGGCAACAAAGATGTTTCATACCAAAAGCCACAAGCATCCACTTGAGCTCAAAAACTACATAAAACGATACACCTGTGACGGCTGCAAGGAGGACGGCTTCGGCCCTCGATACCGTTGCGAAAATTGCGATTACGATCTCCATAAACATTGTATGGAAATTACCGCGTCGACTTCCCACGAGTTCTTCCCCGATTCCACCTTCAATTTCCTCACAACCCCACCCAAAGCTTGCCACAAACACTGCAAACGACAATGCGACGCTTGTCGAAAACCGATCAATGGCTTTGTGTACCACTGCAAGAAGCATAACTTGGACCTCCACCCTTGCTGTAGACATCTCAAGAGAAGATATCAAATCAAAGGAGAAGAAGAAAAAGAAGAATTTGAGTTCATTCTCCATAAGAATGTGGAAAAAAAATGCTTGTGGTGCAATAAGAAGAGCCTCAAAGAAGGTGACTACAGCAATGGATGGTCCTATATTTCTAAGTGCGACGAGTACCATATTCATGTGGCTTGTGTCATTGAAATGATTTTGGAAGAATGGAACAAGAAAAGTGACACTATCAACAAAATCAACTACAATGTTAAGGAAGACAACCACAAATCTCTGGCTCTACACAAGGTGAATTTTAAAGAAATTCAAGCTAAAAGGAATGGGAATGGCAAAACTGGGAACAAGTATTGGAGAATCCTCAAGGTTTTCATTAAGACCATTGTTAGTATTCTTCTTGGAGATCCCACCATGGTTCTTGCCTCTTTGTTCCTTGAATTGCTTCCATGA

Protein sequence

MPSQQNNSEMATKMFHTKSHKHPLELKNYIKRYTCDGCKEDGFGPRYRCENCDYDLHKHCMEITASTSHEFFPDSTFNFLTTPPKACHKHCKRQCDACRKPINGFVYHCKKHNLDLHPCCRHLKRRYQIKGEEEKEEFEFILHKNVEKKCLWCNKKSLKEGDYSNGWSYISKCDEYHIHVACVIEMILEEWNKKSDTINKINYNVKEDNHKSLALHKVNFKEIQAKRNGNGKTGNKYWRILKVFIKTIVSILLGDPTMVLASLFLELLP

Homology

[Close]

BLAST of Lsi02G016450 vs. TrEMBL
Match: A0A0A0KU87_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G515310 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 1.8e-114
Identity = 195/260 (75.00%), Postives = 224/260 (86.15%), Query Frame = 1


Query: 10  MATKMFHTKSHKHPLELKNYIKRYTCDGCKEDGFGPRYRCENCDYDLHKHCMEITASTSH 69
           MATK F TKSHKH L+LK+Y K Y CDGCKE GFG RYRCE CDYDLH++CME T STSH
Sbjct: 1   MATKKFRTKSHKHELQLKSYTKPYICDGCKERGFGSRYRCEKCDYDLHQYCMETTPSTSH 60

Query: 70  EFFPDSTFNFLTTPPKACHKHCKRQCDACRKPINGFVYHCKKHNLDLHPCCRHLKRRYQI 129
           +FFP+STFN  TTPPKACHKHCKR+CDACRKPINGFVYHCKK +LDLHPCCR+LKR Y I
Sbjct: 61  DFFPNSTFNLYTTPPKACHKHCKRRCDACRKPINGFVYHCKKDDLDLHPCCRNLKREYTI 120

Query: 130 KGE-EEKEEFEFILHKNVEKKCLWCNKKSLKEGDYSNGWSYISKCDEYHIHVACVIEMIL 189
           KGE E +EE +FILHKN+++KCLWCNKKS+KEG  SNGWSYISKC+ YH+HV CV EM L
Sbjct: 121 KGEGEGEEELKFILHKNMKQKCLWCNKKSIKEGGRSNGWSYISKCNRYHVHVTCVTEMFL 180

Query: 190 EEWNKKSDTINKINYNVKEDNHKSLALHKVNFKEIQAKRNGNGKTGNKYWRILKVFIKTI 249
           E WN K++TINKIN NVKEDN K+LALHKV+ KEIQAK+NG+GK+G KYW+ILKV I TI
Sbjct: 181 EVWNNKNETINKINCNVKEDNLKALALHKVDLKEIQAKKNGHGKSGKKYWKILKV-ILTI 240

Query: 250 VSILLGDPTMVLASLFLELL 269
           VSI+LG+PTM++AS  LE L
Sbjct: 241 VSIVLGEPTMIVASSLLEAL 259

[Close]

BLAST of Lsi02G016450 vs. TrEMBL
Match: A0A0A0KS98_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517070 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 8.9e-85
Identity = 160/261 (61.30%), Postives = 185/261 (70.88%), Query Frame = 1


Query: 10  MATKMFHTKSHKHPLELKNYIKRYTCDGCKEDGFGPRYRCENCDYDLHKHCMEITAS-TS 69
           MA ++      KH LELK Y+K YTCDGCKE GFGPRYRCE CD+DLHK CM    S   
Sbjct: 1   MAKQLCTPNQLKHELELKKYLKPYTCDGCKEIGFGPRYRCEKCDFDLHKACMFPQDSPVF 60

Query: 70  HEFFPDSTFNFLTTPPKACHKHCKRQCDACRKPINGFVYHCKKHNLDLHPCCRHLKRRYQ 129
           HEFF  S F F  TPP+ACH  CKR CDAC KPINGF+YHC+K +LDLHPCCR+L R YQ
Sbjct: 61  HEFFTRSAFKFSKTPPRACHDECKRICDACTKPINGFMYHCEKDDLDLHPCCRNLNRNYQ 120

Query: 130 IKGEEEKEEFEFILHKNVEKKCLWCNKKSLKEGDYSNGWSYISKCDEYHIHVACVIEMIL 189
           I      E+  F L+K V+ KC+WC K+++K    SNGWSYIS+C EYH+HVACV EM L
Sbjct: 121 I------EDVVFNLYKEVQGKCMWCKKRTIKRHGQSNGWSYISECGEYHVHVACVTEMAL 180

Query: 190 EEWNKK-SDTINKINYNVKEDNHKSLALHKVNFKEIQAKRNGNGKTGNKYWRILKVFIKT 249
           EEW K   D +N  N N      + L L KVN K I+A+  GNG  GNKYWRILKVFIKT
Sbjct: 181 EEWYKNGGDWMNANNAN----QDQQLTLQKVNLKAIKARGRGNGGKGNKYWRILKVFIKT 240

Query: 250 IVSILLGDPTMVLASLFLELL 269
           IVSI+LGDPT VLASLF+EL+
Sbjct: 241 IVSIVLGDPTTVLASLFVELI 251

[Close]

BLAST of Lsi02G016450 vs. TrEMBL
Match: A0A0A0KNT1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G516820 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 2.3e-80
Identity = 153/251 (60.96%), Postives = 180/251 (71.71%), Query Frame = 1


Query: 21  KHPLELKNYIKRYTCDGCKEDGFGPRYRCENCDYDLHKHCMEITASTS-HEFFPDSTFNF 80
           KH LELK Y+K YTCDGCKE GFGPRYRCE C++DLHK CM    S   HEFFP S F F
Sbjct: 12  KHELELKEYLKPYTCDGCKEIGFGPRYRCEKCNFDLHKACMFPQDSPIFHEFFPQSAFEF 71

Query: 81  LTTPPKACHKHCKRQCDACRKPINGFVYHCKKHN--LDLHPCCRHLKRRYQIKGEEEKEE 140
             TPP+AC   CK+ CDAC KPINGF+YHCKK    LDLHPCCR+L R Y+I      E+
Sbjct: 72  FKTPPRACCDDCKKFCDACTKPINGFMYHCKKVKVELDLHPCCRNLNRNYKI------ED 131

Query: 141 FEFILHKNVEKKCLWCNKKSLKEGDYSNGWSYISKCDEYHIHVACVIEMILEEWNKKSDT 200
            EF L+K V+ KC+WC K+++     +NGWSYIS+C EYH+HVACVIEM LEEW+K    
Sbjct: 132 VEFNLYKKVKGKCMWCKKRTINPHGQTNGWSYISECGEYHVHVACVIEMALEEWHKNGG- 191

Query: 201 INKINYNVKEDNHKSLALHKVNFKEIQAKRNGNGKTGNKYWRILKVFIKTIVSILLGDPT 260
            N IN N   +  + LAL K+N K I+A+  G G  GNKYWRILKVFI TIVSI+LGDPT
Sbjct: 192 -NWINAN-NANQDQQLALQKLNLKAIKARGRGKGGKGNKYWRILKVFIGTIVSIVLGDPT 251

Query: 261 MVLASLFLELL 269
            VL SLF+EL+
Sbjct: 252 TVLVSLFVELI 253

[Close]

BLAST of Lsi02G016450 vs. TrEMBL
Match: A0A0A0KNV1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G515560 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.6e-65
Identity = 128/258 (49.61%), Postives = 168/258 (65.12%), Query Frame = 1


Query: 16  HTKSHKHPLELKNYIKRYTCDGCKEDGFGPRYRCENCDYDLHKHCMEI-TASTSHEFFPD 75
           H     H LE +NY + YTC GCK+ GFGPRYRC+NCD+D H+ C    T    H++FP 
Sbjct: 10  HPTHPNHELEPQNYARPYTCHGCKQKGFGPRYRCQNCDFDFHQACTYTGTDPVYHDYFPG 69

Query: 76  STFNFLTTPPKACHKHCKRQCDACRKPINGFVYHCKKHNLDLHPCCRHLKRRYQIKGEEE 135
           S F FL  PP+ CH  CK +CDACR  I GFV+H ++ +LDLHPCC +L+R YQI     
Sbjct: 70  SKFMFLRNPPEPCHPECKIRCDACRNTIKGFVFHSEEDDLDLHPCCWNLERSYQI----- 129

Query: 136 KEEFEFILHKNVEKKCLWCNKKSLKEGDYSNGWSYISKCDEYHIHVACVIEMILEEW--N 195
            E+ +F L+K V+ KC+WCN K LK+G   NGWSY+S   +YH+HVACV E+ LE W  N
Sbjct: 130 -EDMKFNLNKKVKGKCMWCNSKRLKDGGTDNGWSYVSNSGKYHVHVACVTEIALEAWYNN 189

Query: 196 KKSDTINKINYNVKEDNHKSLALHKVNFKEIQAKRN-GNGKTG-NKYWRILKVFIKTIVS 255
            ++D     +        + LAL K   KE+Q     G+G  G NK+WRILK  +KT+VS
Sbjct: 190 NRTDGGGGSSSTSSRGGQEFLALKK-KLKEVQVVGGYGDGGFGKNKFWRILKFLVKTVVS 249

Query: 256 ILLGDPTMVLASLFLELL 269
           I++GDPTM+LAS F++LL
Sbjct: 250 IVIGDPTMILASFFVDLL 260

[Close]

BLAST of Lsi02G016450 vs. TrEMBL
Match: F6HNY0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01280 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 8.1e-62
Identity = 124/260 (47.69%), Postives = 156/260 (60.00%), Query Frame = 1


Query: 16  HTKSHKHPLELKNYIKRYTCDGCKEDGFGPRYRCENCDYDLHKHCMEITASTSHEFFPDS 75
           H    +H LELKNY K YTCDGCKE GFG RYRCE CD+DLHK CM    +T+H+FF ++
Sbjct: 8   HFSHPEHSLELKNYKKPYTCDGCKEPGFGSRYRCEACDFDLHKDCMFPAETTTHDFFGNA 67

Query: 76  TFNFLTTPP------KACHKHCKRQCDACRKPINGFVYHCKKHNLDLHPCCRHLKRRYQI 135
           TF FL  PP      K C   CK  CDAC K + GFVYHC  HNLDLHPCCR+L+ +  I
Sbjct: 68  TFKFLPRPPNLKCQEKHCRNKCKSYCDACGKVVKGFVYHCAAHNLDLHPCCRNLETKMDI 127

Query: 136 KGEEEKEEFEFILHKNVEKKCLWCNKKSLK-EGDYSNGWSYISKCDEYHIHVACVIEMIL 195
            GE      EF L   V ++C WC KK L   G    GW+Y S+ ++Y+ HV CV EM L
Sbjct: 128 HGE------EFWLQDKVSRRCNWCRKKKLHGRGSGVQGWAYASRNEDYYFHVGCVPEMTL 187

Query: 196 EEWNKKSDTINKINYNVKEDNHKSLALHKVNFKEIQAKRNGNGKTGNKYWRILKVFIKTI 255
           + W     + N       +D+ +S+A       ++Q    GN   GNKYW++LK  +K I
Sbjct: 188 DAWQNDGGSGN------DDDDDRSVATVSKMKMQLQRNSKGNRGRGNKYWKMLKSILKII 247

Query: 256 VSILLGDPTMVLASLFLELL 269
           VS+LLGDPT+ LA +  E L
Sbjct: 248 VSVLLGDPTITLACVVAESL 255

[Close]

BLAST of Lsi02G016450 vs. TAIR10
Match: AT2G16050.1 (AT2G16050.1 Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 149.4 bits (376), Expect = 3.1e-36
Identity = 91/258 (35.27%), Postives = 128/258 (49.61%), Query Frame = 1


Query: 16  HTKSHKHPLELKNYIKRYTCDGCKEDGFGPRYRCE-----NCDYDLHKHCMEITASTSHE 75
           H    +H L+     K + CDGC E G G RYRC      +CD+DLH HC   +AS +H 
Sbjct: 8   HFSHPQHNLKFDYTEKPFKCDGCNEVGIGSRYRCSGDNHGSCDFDLHAHCALPSASITHP 67

Query: 76  FFPDSTFNFLTTPPKACHKHCKRQCDACRKPINGFVYHCKKHNLDLHPCCRHLKRRYQIK 135
           F+   TF F+  PP     + +R C+AC K ++GF+YHCK    DLHPCC  L       
Sbjct: 68  FYKKCTFQFVARPPG----NERRYCNACEKDVSGFLYHCKACGFDLHPCCAMLPMVL--- 127

Query: 136 GEEEKEEFEFILHKNVEKKCLWCNKKSLKEGDYSNGWSYISKCDEYHIHVACVIEMILEE 195
              +  E    L++ V   C  C KK          WSY S C +Y++HVACV EM++E 
Sbjct: 128 ---DDGETNLFLYRKVSSSCHRCGKK-------GRSWSYRSSCKKYNLHVACVREMLVEN 187

Query: 196 WNKKSDTINKINYNVKEDNHKSLALHKVNFKEIQAKRNGNGKTGNKYWRILKVFIKTIVS 255
           W +          + K   HKSL L   N  E   + +  GK   K   I  + ++ ++S
Sbjct: 188 WREL-----YTGQHGKSIEHKSLVLK--NTLEHHHRSSRKGKV-QKCCEIAGIAVQFVIS 240

Query: 256 ILLGDPTMVLASLFLELL 269
            +LGDPT ++A +   L+
Sbjct: 248 AVLGDPTTLIAGVVGSLI 240

[Close]

BLAST of Lsi02G016450 vs. TAIR10
Match: AT2G37800.1 (AT2G37800.1 Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 89.7 bits (221), Expect = 2.9e-18
Identity = 44/128 (34.38%), Postives = 62/128 (48.44%), Query Frame = 1


Query: 5   QNNSEMATKMFHTK---------SHKHPLELKNYIKRYTCDGCKEDGFGPRYRCENCDYD 64
           Q N++  TKM  ++         +H HPL   +    +TCDGCK  GFG  YRC  CDY+
Sbjct: 126 QENNKKTTKMSSSRPEQLVVQHFTHIHPLTKVDGYGEFTCDGCKTYGFGKTYRCTRCDYN 185

Query: 65  LHKHCMEITASTSHEFFPDSTFNFLTTPPKACHKHCKRQCDACRKPINGFVYHCKKHNLD 124
           LH HC    ++ +    P      +   P+  H++ KR CD C +   G  Y C+    D
Sbjct: 186 LHDHCATCPSTLATFMHPQHELRLVFRGPEHTHQN-KRMCDICDESAEGLYYQCEPCGFD 245

[Close]

BLAST of Lsi02G016450 vs. TAIR10
Match: AT2G37820.1 (AT2G37820.1 Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-15
Identity = 46/168 (27.38%), Postives = 72/168 (42.86%), Query Frame = 1


Query: 19  SHKHPLELKNYIKRYTCDGCKEDGFGPRYRCENCDYDLHKHCMEITASTSHEFFPDSTFN 78
           +H HPL   N I  + CDGCK  G G  YRCE C+YDLH++C     +      P    +
Sbjct: 15  THIHPLTEFNSIGDFICDGCKTYGSGKTYRCEPCNYDLHEYCATCPLTLPTFIHPQHELS 74

Query: 79  FLTTPPKACHKHCKRQCDACRKPINGFVYHCKKHNLDLHPCCRHLKR--RYQIKGEEEKE 138
            +    ++  ++  R CD C + + G  Y CK    D+HP C  L +  R+ +      E
Sbjct: 75  LVVRKQQSTRQN-DRACDICDESVEGLFYRCKICEFDVHPLCTQLPQHVRHVLHPAHHLE 134

Query: 139 EFEFILHKNVEKKCLWCNKKSLKEGDYSNGWSYISKCDEYHIHVACVI 185
                   +    C+ C+            W Y  +   + IH+ C++
Sbjct: 135 -----FRPSGASTCMVCHGP-------CQSWRYRCELCRFDIHMECIL 169

[Close]

BLAST of Lsi02G016450 vs. TAIR10
Match: AT2G37780.1 (AT2G37780.1 Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 75.5 bits (184), Expect = 5.7e-14
Identity = 43/110 (39.09%), Postives = 55/110 (50.00%), Query Frame = 1


Query: 19  SHKHPLELKNYIKRYTCDGCKEDGFGPRYRCENCDYDLHKHCM---EITASTSHEFFPD- 78
           +H H L   N I  YTCDGCK  G G  YRC +CDYDLH++C     I  ++ H   PD 
Sbjct: 11  THNHLLTQVNGIGTYTCDGCKLYGEGRTYRCSDCDYDLHEYCATCPSILLNSCHG--PDH 70

Query: 79  --STFNFLTTPPKACHKHCKRQCDACRKPINGFVYHCKKHNLDLHPCCRH 123
             S FN   T         +R C  CR  I G  Y C++ + + HP C +
Sbjct: 71  ELSLFNGHMT---------ERSCYVCRVSIQGMFYKCRQCSFEAHPLCTY 109

[Close]

BLAST of Lsi02G016450 vs. TAIR10
Match: AT1G20990.1 (AT1G20990.1 Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 72.4 bits (176), Expect = 4.8e-13
Identity = 39/112 (34.82%), Postives = 51/112 (45.54%), Query Frame = 1


Query: 13  KMFHTKSHKHPLELKNYIKRYTCDGCKEDGFGPRYRCENCDYDLHKHC-MEITASTSHEF 72
           +M H    +H L        YTC GCKE+G G RY C+ CDY LH+ C +      SH F
Sbjct: 67  EMVHFGHPQHVLVKVELPDIYTCAGCKEEGAGVRYVCQECDYQLHEFCALAPPQLKSHPF 126

Query: 73  FPDSTFNFLTTPPKACHKHCKRQCDACRKPINGFVYHCKKHNLDLHPCCRHL 124
                  F   P K      K +CD C +   G+ + CK  +  +HP C  L
Sbjct: 127 HYQHQLLFFAKPAKG--GIVKSKCDVCGRSPKGYTFRCKACSFQMHPGCAML 176

[Close]

BLAST of Lsi02G016450 vs. NCBI nr
Match: gi|449450165|ref|XP_004142834.1| (PREDICTED: uncharacterized protein LOC101213112 [Cucumis sativus])

HSP 1 Score: 420.2 bits (1079), Expect = 2.7e-114
Identity = 195/260 (75.00%), Postives = 224/260 (86.15%), Query Frame = 1


Query: 10  MATKMFHTKSHKHPLELKNYIKRYTCDGCKEDGFGPRYRCENCDYDLHKHCMEITASTSH 69
           MATK F TKSHKH L+LK+Y K Y CDGCKE GFG RYRCE CDYDLH++CME T STSH
Sbjct: 1   MATKKFRTKSHKHELQLKSYTKPYICDGCKERGFGSRYRCEKCDYDLHQYCMETTPSTSH 60

Query: 70  EFFPDSTFNFLTTPPKACHKHCKRQCDACRKPINGFVYHCKKHNLDLHPCCRHLKRRYQI 129
           +FFP+STFN  TTPPKACHKHCKR+CDACRKPINGFVYHCKK +LDLHPCCR+LKR Y I
Sbjct: 61  DFFPNSTFNLYTTPPKACHKHCKRRCDACRKPINGFVYHCKKDDLDLHPCCRNLKREYTI 120

Query: 130 KGE-EEKEEFEFILHKNVEKKCLWCNKKSLKEGDYSNGWSYISKCDEYHIHVACVIEMIL 189
           KGE E +EE +FILHKN+++KCLWCNKKS+KEG  SNGWSYISKC+ YH+HV CV EM L
Sbjct: 121 KGEGEGEEELKFILHKNMKQKCLWCNKKSIKEGGRSNGWSYISKCNRYHVHVTCVTEMFL 180

Query: 190 EEWNKKSDTINKINYNVKEDNHKSLALHKVNFKEIQAKRNGNGKTGNKYWRILKVFIKTI 249
           E WN K++TINKIN NVKEDN K+LALHKV+ KEIQAK+NG+GK+G KYW+ILKV I TI
Sbjct: 181 EVWNNKNETINKINCNVKEDNLKALALHKVDLKEIQAKKNGHGKSGKKYWKILKV-ILTI 240

Query: 250 VSILLGDPTMVLASLFLELL 269
           VSI+LG+PTM++AS  LE L
Sbjct: 241 VSIVLGEPTMIVASSLLEAL 259

[Close]

BLAST of Lsi02G016450 vs. NCBI nr
Match: gi|659117975|ref|XP_008458884.1| (PREDICTED: uncharacterized protein LOC103498155 [Cucumis melo])

HSP 1 Score: 399.8 bits (1026), Expect = 3.7e-108
Identity = 189/270 (70.00%), Postives = 224/270 (82.96%), Query Frame = 1


Query: 1   MPSQQNNSEMATKMFHTKSHKHPLELKNYIKRYTCDGCKEDGFGPRYRCENCDYDLHKHC 60
           M S QN SEMAT +FHTKSH+HPLELK+YIK Y CDGCK  GFG RYRCE CD+DLH+HC
Sbjct: 1   MSSHQNISEMATNLFHTKSHQHPLELKSYIKPYICDGCKVQGFGSRYRCEQCDFDLHEHC 60

Query: 61  MEITASTSHEFFPDSTFNFLTTPPKACHKHCKRQCDACRKPINGFVYHCKKHNLDLHPCC 120
           +E+T ST+H+FFP+STF+F T PPKA HKHCKRQC ACRK +NGFVYHCK+H+LDLHP C
Sbjct: 61  LEVTPSTTHKFFPNSTFDFFTIPPKASHKHCKRQCGACRKSVNGFVYHCKEHDLDLHPGC 120

Query: 121 RHLKRRYQIKGEEEKEEFEFILHKNVEKKCLWCNKKSLKEGDYSNGWSYISKCDEYHIHV 180
           R+LKRRY++KG     E  F LHKNV++KCLWCN+KS+KEGD SNGWSYISKC +YH+HV
Sbjct: 121 RNLKRRYKMKG----GELVFNLHKNVKQKCLWCNEKSIKEGDRSNGWSYISKCKKYHVHV 180

Query: 181 ACVIEMILEEWNKKSDTINKI-NYNVKEDNHKSLALHKVNFKEIQAKRNGNGKTGNKYWR 240
           ACV E++LEEWN  S TINKI NYNVKED+ K+LAL+KVN KE+Q  RN NGK+ N  WR
Sbjct: 181 ACVTEILLEEWNNNSHTINKIVNYNVKEDDLKALALYKVNLKEVQTTRNWNGKSWNMCWR 240

Query: 241 ILKVFIKTIV-SILLGDPTMVLASLFLELL 269
           ILKV I+T V SI++ DP +VLA+L LELL
Sbjct: 241 ILKVLIQTTVGSIVIRDPKLVLATLLLELL 266

[Close]

BLAST of Lsi02G016450 vs. NCBI nr
Match: gi|659118053|ref|XP_008458928.1| (PREDICTED: uncharacterized protein LOC103498189 [Cucumis melo])

HSP 1 Score: 328.9 bits (842), Expect = 8.0e-87
Identity = 162/261 (62.07%), Postives = 188/261 (72.03%), Query Frame = 1


Query: 10  MATKMFHTKSHKHPLELKNYIKRYTCDGCKEDGFGPRYRCENCDYDLHKHCM-EITASTS 69
           MA ++      KH LELK Y+K YTCDGCKE GFGPRYRCE CD+DLHK CM    +   
Sbjct: 1   MAKQLCTPNQLKHELELKKYLKPYTCDGCKEIGFGPRYRCEKCDFDLHKACMFPQNSPVF 60

Query: 70  HEFFPDSTFNFLTTPPKACHKHCKRQCDACRKPINGFVYHCKKHNLDLHPCCRHLKRRYQ 129
           HEFFP STF FL TPP+ACH  CKR CDAC KPINGF+YHC+K  LDLHPCCR+L  +YQ
Sbjct: 61  HEFFPRSTFKFLKTPPRACHDECKRICDACTKPINGFMYHCEKDQLDLHPCCRNLNSKYQ 120

Query: 130 IKGEEEKEEFEFILHKNVEKKCLWCNKKSLKEGDYSNGWSYISKCDEYHIHVACVIEMIL 189
           I      E+ +F L+K ++ KC+WC KK++K    SNGWSYIS+C EYH+HVACV EM L
Sbjct: 121 I------EDVKFNLYKEIQGKCMWCKKKTIKRHGQSNGWSYISECGEYHVHVACVTEMAL 180

Query: 190 EEWNKK-SDTINKINYNVKEDNHKSLALHKVNFKEIQAKRNGNGKTGNKYWRILKVFIKT 249
           EEW K     IN  N N  E     LAL KVN K I+A+  GNG  GNKYWRILKVFI+T
Sbjct: 181 EEWYKNGGGWINANNANQDE----QLALQKVNLKAIKARGRGNGGKGNKYWRILKVFIET 240

Query: 250 IVSILLGDPTMVLASLFLELL 269
           IVSI+LGDPT VLASLF+EL+
Sbjct: 241 IVSIVLGDPTTVLASLFVELI 251

[Close]

BLAST of Lsi02G016450 vs. NCBI nr
Match: gi|778708576|ref|XP_011656238.1| (PREDICTED: uncharacterized protein LOC105435689 [Cucumis sativus])

HSP 1 Score: 321.6 bits (823), Expect = 1.3e-84
Identity = 160/261 (61.30%), Postives = 185/261 (70.88%), Query Frame = 1


Query: 10  MATKMFHTKSHKHPLELKNYIKRYTCDGCKEDGFGPRYRCENCDYDLHKHCMEITAS-TS 69
           MA ++      KH LELK Y+K YTCDGCKE GFGPRYRCE CD+DLHK CM    S   
Sbjct: 1   MAKQLCTPNQLKHELELKKYLKPYTCDGCKEIGFGPRYRCEKCDFDLHKACMFPQDSPVF 60

Query: 70  HEFFPDSTFNFLTTPPKACHKHCKRQCDACRKPINGFVYHCKKHNLDLHPCCRHLKRRYQ 129
           HEFF  S F F  TPP+ACH  CKR CDAC KPINGF+YHC+K +LDLHPCCR+L R YQ
Sbjct: 61  HEFFTRSAFKFSKTPPRACHDECKRICDACTKPINGFMYHCEKDDLDLHPCCRNLNRNYQ 120

Query: 130 IKGEEEKEEFEFILHKNVEKKCLWCNKKSLKEGDYSNGWSYISKCDEYHIHVACVIEMIL 189
           I      E+  F L+K V+ KC+WC K+++K    SNGWSYIS+C EYH+HVACV EM L
Sbjct: 121 I------EDVVFNLYKEVQGKCMWCKKRTIKRHGQSNGWSYISECGEYHVHVACVTEMAL 180

Query: 190 EEWNKK-SDTINKINYNVKEDNHKSLALHKVNFKEIQAKRNGNGKTGNKYWRILKVFIKT 249
           EEW K   D +N  N N      + L L KVN K I+A+  GNG  GNKYWRILKVFIKT
Sbjct: 181 EEWYKNGGDWMNANNAN----QDQQLTLQKVNLKAIKARGRGNGGKGNKYWRILKVFIKT 240

Query: 250 IVSILLGDPTMVLASLFLELL 269
           IVSI+LGDPT VLASLF+EL+
Sbjct: 241 IVSIVLGDPTTVLASLFVELI 251

[Close]

BLAST of Lsi02G016450 vs. NCBI nr
Match: gi|778708574|ref|XP_011656237.1| (PREDICTED: uncharacterized protein LOC105435688 [Cucumis sativus])

HSP 1 Score: 307.0 bits (785), Expect = 3.3e-80
Identity = 153/251 (60.96%), Postives = 180/251 (71.71%), Query Frame = 1


Query: 21  KHPLELKNYIKRYTCDGCKEDGFGPRYRCENCDYDLHKHCMEITASTS-HEFFPDSTFNF 80
           KH LELK Y+K YTCDGCKE GFGPRYRCE C++DLHK CM    S   HEFFP S F F
Sbjct: 12  KHELELKEYLKPYTCDGCKEIGFGPRYRCEKCNFDLHKACMFPQDSPIFHEFFPQSAFEF 71

Query: 81  LTTPPKACHKHCKRQCDACRKPINGFVYHCKKHN--LDLHPCCRHLKRRYQIKGEEEKEE 140
             TPP+AC   CK+ CDAC KPINGF+YHCKK    LDLHPCCR+L R Y+I      E+
Sbjct: 72  FKTPPRACCDDCKKFCDACTKPINGFMYHCKKVKVELDLHPCCRNLNRNYKI------ED 131

Query: 141 FEFILHKNVEKKCLWCNKKSLKEGDYSNGWSYISKCDEYHIHVACVIEMILEEWNKKSDT 200
            EF L+K V+ KC+WC K+++     +NGWSYIS+C EYH+HVACVIEM LEEW+K    
Sbjct: 132 VEFNLYKKVKGKCMWCKKRTINPHGQTNGWSYISECGEYHVHVACVIEMALEEWHKNGG- 191

Query: 201 INKINYNVKEDNHKSLALHKVNFKEIQAKRNGNGKTGNKYWRILKVFIKTIVSILLGDPT 260
            N IN N   +  + LAL K+N K I+A+  G G  GNKYWRILKVFI TIVSI+LGDPT
Sbjct: 192 -NWINAN-NANQDQQLALQKLNLKAIKARGRGKGGKGNKYWRILKVFIGTIVSIVLGDPT 251

Query: 261 MVLASLFLELL 269
            VL SLF+EL+
Sbjct: 252 TVLVSLFVELI 253

The following BLAST results are available for this feature:

BLAST of Lsi02G016450 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi02G016450 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KU87_CUCSA	1.8e-114	75.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G515310 PE=4 SV=1	[more]
A0A0A0KS98_CUCSA	8.9e-85	61.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517070 PE=4 SV=1	[more]
A0A0A0KNT1_CUCSA	2.3e-80	60.96	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G516820 PE=4 SV=1	[more]
A0A0A0KNV1_CUCSA	1.6e-65	49.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G515560 PE=4 SV=1	[more]
F6HNY0_VITVI	8.1e-62	47.69	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g01280 PE=4 SV=...	[more]

BLAST of Lsi02G016450 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G16050.1	3.1e-36	35.27	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G37800.1	2.9e-18	34.38	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G37820.1	1.3e-15	27.38	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G37780.1	5.7e-14	39.09	Cysteine/Histidine-rich C1 domain family protein	[more]
AT1G20990.1	4.8e-13	34.82	Cysteine/Histidine-rich C1 domain family protein	[more]

BLAST of Lsi02G016450 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449450165\|ref\|XP_004142834.1\|	2.7e-114	75.00	PREDICTED: uncharacterized protein LOC101213112 [Cucumis sativus]	[more]
gi\|659117975\|ref\|XP_008458884.1\|	3.7e-108	70.00	PREDICTED: uncharacterized protein LOC103498155 [Cucumis melo]	[more]
gi\|659118053\|ref\|XP_008458928.1\|	8.0e-87	62.07	PREDICTED: uncharacterized protein LOC103498189 [Cucumis melo]	[more]
gi\|778708576\|ref\|XP_011656238.1\|	1.3e-84	61.30	PREDICTED: uncharacterized protein LOC105435689 [Cucumis sativus]	[more]
gi\|778708574\|ref\|XP_011656237.1\|	3.3e-80	60.96	PREDICTED: uncharacterized protein LOC105435688 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0035556	intracellular signal transduction

Vocabulary: **INTERPRO**
Term	Definition
IPR004146	DC1
IPR002219	PE/DAG-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005622	intracellular
molecular_function	GO:0047134	protein-disulfide reductase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G016450.1	Lsi02G016450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002219	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	PROFILE	PS50081	ZF_DAG_PE_2	coord: 21..68 score: 8
IPR004146	DC1	PFAM	PF03107	C1_2	coord: 18..61 score: 7.6
None	No IPR available	GENE3D	G3DSA:3.30.60.20		coord: 20..62 score: 3.
None	No IPR available	PANTHER	PTHR13871	THIOREDOXIN	coord: 10..268 score: 2.4
None	No IPR available	PANTHER	PTHR13871:SF33	SUBFAMILY NOT NAMED	coord: 10..268 score: 2.4
None	No IPR available	unknown	SSF57889	Cysteine-rich domain	coord: 13..66 score: 1.01E-11coord: 86..130 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G016450	Watermelon (97103) v2	lsiwmbB182
Lsi02G016450	Watermelon (97103) v2	lsiwmbB205
Lsi02G016450	Watermelon (97103) v2	lsiwmbB208
Lsi02G016450	Bottle gourd (USVL1VR-Ls)	lsilsiB067
Lsi02G016450	Bottle gourd (USVL1VR-Ls)	lsilsiB102
Lsi02G016450	Cucumber (Gy14) v1	cgylsiB061
Lsi02G016450	Cucumber (Gy14) v1	cgylsiB318
Lsi02G016450	Cucurbita maxima (Rimu)	cmalsiB272
Lsi02G016450	Cucurbita maxima (Rimu)	cmalsiB607
Lsi02G016450	Cucurbita maxima (Rimu)	cmalsiB651
Lsi02G016450	Cucurbita maxima (Rimu)	cmalsiB798
Lsi02G016450	Cucurbita moschata (Rifu)	cmolsiB261
Lsi02G016450	Cucurbita moschata (Rifu)	cmolsiB595
Lsi02G016450	Cucurbita moschata (Rifu)	cmolsiB634
Lsi02G016450	Cucurbita moschata (Rifu)	cmolsiB640
Lsi02G016450	Cucurbita moschata (Rifu)	cmolsiB784
Lsi02G016450	Cucurbita pepo (Zucchini)	cpelsiB141
Lsi02G016450	Cucurbita pepo (Zucchini)	cpelsiB336
Lsi02G016450	Wild cucumber (PI 183967)	cpilsiB267
Lsi02G016450	Wild cucumber (PI 183967)	cpilsiB351
Lsi02G016450	Cucumber (Chinese Long) v2	culsiB269
Lsi02G016450	Cucumber (Chinese Long) v2	culsiB347
Lsi02G016450	Melon (DHL92) v3.5.1	lsimeB162
Lsi02G016450	Melon (DHL92) v3.5.1	lsimeB229
Lsi02G016450	Watermelon (Charleston Gray)	lsiwcgB155
Lsi02G016450	Watermelon (Charleston Gray)	lsiwcgB189
Lsi02G016450	Watermelon (97103) v1	lsiwmB170
Lsi02G016450	Watermelon (97103) v1	lsiwmB209
Lsi02G016450	Cucumber (Gy14) v2	cgyblsiB253
Lsi02G016450	Cucumber (Gy14) v2	cgyblsiB318
Lsi02G016450	Cucumber (Gy14) v2	cgyblsiB322
Lsi02G016450	Cucumber (Gy14) v2	cgyblsiB323
Lsi02G016450	Melon (DHL92) v3.6.1	lsimedB171
Lsi02G016450	Melon (DHL92) v3.6.1	lsimedB241
Lsi02G016450	Melon (DHL92) v3.6.1	lsimedB178
Lsi02G016450	Silver-seed gourd	carlsiB232
Lsi02G016450	Silver-seed gourd	carlsiB623
Lsi02G016450	Cucumber (Chinese Long) v3	cuclsiB290
Lsi02G016450	Cucumber (Chinese Long) v3	cuclsiB370
Lsi02G016450	Cucumber (Chinese Long) v3	cuclsiB374