Lsi02G016420 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTAAAATATATACGTAATAGAGGTAAAAGATTTAATTAAAAGATTCGAATTTTCCCACTTCACATATGTGATTAGTTGAGTTACGCTTGTTTTAACAACCTTTTTTTTCTTTTTTTTATCAACATCAAATTATACCTATTGTTTGATGTACGAGAGAGAATTTAAAAATTGTATTTTAAATTTAGAGGAATACTTGGATATATCCAGGATTACGCTCATTTTTATGCAACTTCCTTCTAATCACATAACAATATATATTGTTGAGAATGTGACTAAAATTGCATACTGGTTAGATAAGGGGATGATCATGGATATATAAGTGATGACAGCTATCTCCATTGGTATGATCTTTTTTCGTGTGAAACTAAAAGCAAAATCACGAGAGTTTATGTCCAAAGTAGATACTATGATCCAATAGAAATATTTGGAAGGATCATTGTCACTAACGATTGATATTAGTATCTAGTGCAATCAGATTTCTTGCCTTGGTAATTAAGTCTAATTATAAACAATATATTAGAATAAGAATATAATCGTCAAAATAATTGCAACTAATATTAGTTTGGATTCTTCTATATACTTGGTTCATATTTAAGAAAACTACATAATAATGTTAAATGTTTAATATATAACTAAGATGAATGAAGACAAATAATTAGAAATTACAATAATGTATTGTATTATAGACGACCCCACAACCTAATTAAGCGTCATTAGACTTACAAAAGACTTGGTAAAAGAGAACAGATATGCCCAAGTGTTGAGAAATTTCATCCGAATTCATACGCATTCGAATGCAAAAAGATGAAGGAAAAAACGTTTAGATTTGAATTAAATACTAAAAACGTTTCAAGATTTAAATTAAATAAAGAAATACATTTTTTTAAATCTTGGGGATTAAACACTTATAAATCTTTTAATGTGGGATAAATGCAAAAACAAAACTTTTATGACAAGTTATTCTAACAATTGACTAGTCATTCCCAACAATCCCTCACGAGTGACTGACAATTAAAAAAATAATAATAATAATTTATCCGAGCAAACAAAGGAGAATAAACTTAAACATCAATATCTTTCGATTTGAATTGATGGATAGTGAAGTAGGGCAACAACTTTATTAGAGAAAGTGAGTTACCTCTTGAACTTTCAATAACTACGGTTGAGACCCCCACAACACGTTTTACTCCTTAAATTTTCTTGATTCCACGATACAATGCGTGCTATTTAAGGCCATGCACATAAACCTCGGGTCACCGTGATAGCTCTAGAAAAAGACCCTTAAACTTTTTCATAGAAGGCGACCACACCTTCACAATCACGTTAGTTGCTTCATCAAGTCTATCGCAATAGGCCACTCAAAAACTGAGCTATGAAGACTTCACATCTAGTCCATATCAAGACCAACTTCATCAAGTCTGTCAAAGACAAACCACTCAAAACTGAGCTATGAAGATTTTACAATTATCCATCAAGTCCATACCAAAACCACCTAAAAGAAGGGCTATGGAATTTTTGAAGGTTTTAGTTCTGTCCATCAAGTCTGTACCTAGGACCACCCAAATGAAATGCTATGGTAGACCACCCAAATAAAGGGCTATGGACCACTATAATGGTTTAGTGAAAGGATCTACTAAATTCCTTTCAAATCTTACAATGAAATAATCCTTCTTTCAGTAACTGTTTCACAGCTCCATGTCTGAGGCGTATATGCCTCTTCTTGCCATCATACACGCTATTCTTGGTAATTCCTATGGTAGTCTGTGAATCACATTGCAAAGAGATTGGTACTAACGCCCCTCACAATGGTACTTCTCTCAATAGGCTTCTAAGCCACTCATATTGATGCCCCCACAATGGTGCATCTGGGCCCCACAATGGTGCATCTCCCAGTAGGCTTCTAAGCCTCTCCTGCTAATTCTAGAGCAATAAATTCAGACTCAATGGTGGACCTTGCTATACAAGTCTATTTTGCAGACTTCCATGAAATAGCTCCTCTACCCAATAAGAACACATCCACTAGTAAAGTTTACTTCGTCATTCTAAGTTACCAAGTTTGCATACACCACCCCTTTAGTATGGCATGAAATTATTAAAATGCAAACAATAAAGTATTGTACCCTTAAGATACCTTAATAAATGACGAAGGACAATCAAATGATCTTTATTAGGATTATGTGTATATCTACTCAATCTTCTCACAACAAATGCAATCATAGGTCTAGTATAGTTCATAAAAACATAACACTTCCTATAATCTTTGCATATTTAGATCGAGAAACACTATCTTCCTTATTTTCTTAAGACTCATACTAGCTTCATAAGGTGTTCTTATAGGAGCATCATTAAAGCAATCAAATCTCTTTAGCATTTTTCAATATGTGATTAATATAAAGAAAATCCATTTTCAGTTTTCCTTATCTTAACACCGATTATCACATCACCCTCACCTAAATATTTCATTTCAAAATGTGAGGACATAAATAACTTAGTATTATTACTTACATCTATGTTTGTATAAAAAATCAGTATATCGTTAATATACAAACAGGTAATCACACAATCAGCTCCAAACAACTTTGAGTAAACACATGTATCACAACAATTTACTTTAAAACCATATAGAGATTGTGTGAATTTACATACCTTCAGATGGTGTTACATATATATTTCCTCATCCAAGTTATCATTGAGGAATGCTATCTTTGCATCCATTTGATGTACTAGATGACCACATATTGCTGCAAATGCTATCAAGTCTCTATAGTAGCTATTTTAGTCATACGAGAGTATGCATCTGAATATTCGATGTCTTATTTGCATACCCCTAATTGATTTATTTCAATATGTCTCTTCATAAGTTACTTAATAGCTAATCGACATTTGCTCTTTTCATGGTCCTAGATATGCTCAATAAAACAAAGACGAATAACTTTATACATGCACCTATGTGCCCATTATCATCTCCTAATTTGAACAATGTGGGACTTTGGTCGCATTCTCGACACTCCTCCCACCAAACAAAGGACCAACTGAGCTTCCCCTAAAATAGCCATCCATCCATCTAACTCTTTTTCACTAAAGCATACGGCCTATTTGATAGAGTTTGACCATGATCACACACGACTCCTTTCGAGGTTTCACTACATCATTGTTTGACGCCTAAGGATTATATCGACATAGCTAAACTAGGGACACAACTATGTCACCACTTATTAGGGACAACAACTCTCCAAGTATCTCCACAATGGTACGATATTGTCCACTTTGGGTCTCTCATGACTTTGCGTTTGAGTTTGACCCCAAAAGTCTCATACGAATGGAGATAGTTGTTCTAACTTATATATCCATGAAAAGTCCTTATATCCACATATTTATAGTTTAGACACTATCTCATATTGTCATTAATTCTACAAGCTTCCACATAAAATTTATGGAATTTACATATTTTCACACTACAAGCAGCTTGATAGTCAAAATAATATTATAAGGCCAAACCAAATTTAAAAGTAATCATAATACTTTTCAACTTCTTCATGAAATTTAATGGCCAAACATAAAGCATAAAGTTTGTCAAATATAACATACATGGAATGTTATTTCCATTCACGATAACGTGATAATTAGACTTGCTTAAGTAGATCACAGTAACATCTTATTTAGAATATAGAAAGTAATACAATAACAACAATAAGATTATTTTCTTATTGCACTTGTCATGAGACGATTTGCTAATTACGAAATATTCAAATATATATGGAATATCATGCTTAATGACACATAAGATAAATTTTCTTACCATACATAAGAAATTTAAATGTTGAGCTTAAAAATATAGGAAAGTCAACCTATATTTAAGTTCATTCATAATCAACTAGAGAAGACTTAAAATTTCCAACCAAAAGATCTACAACATATTTGAAATTTTAATTTGATTTATATCAAAATTTGAATCACATGAAGAAAACGTCATTGTCATCACCATTTAAATTGGCCGTGATAATTAACCACAAGACCAAATATCTTGCTACAAAATCTACGTATTCCAAAACTTAATCACAAGTACATATAAAAATCAATATAAATCAATCCACTAATTTACTCATCACAAAGTGAAAACTCAATATGTTGAGTTAACTCTCCAAATCTCCCAAATAAATCTCTCAAATTATGTCTTTAATTGGAGACCTTAGTTAATAAGTGCAATATATATATACATATACTTTCCATCTTTTCTAAATTGCTCCTCAATTTACAATGAAAAAAAATTCATAATTTTATATCCTTGTTTAACAATCTTAAAAACAAAGAATCACAACATAATCTCTATTAATATTTCTTTCCAGCAAATAATAATAATAATATTAAGTGAACAAAACAATTGAAATAGAATCTGTAACGTCCCAGAATTTAATTGCAAGGATTAATAAATTAAGTGATGGAGATTTTGTGGAATTCGAATTTAAACAGTATAAATTATACCTCGTTGTGTAGGATTTGAAGAATACTATTATGGATTTGAGAAGAAGAAGGAATAATAATGTATATAAATATAAATATATATATATATATATATATATATATTTATTTATTTATTATTTAAATATAATTTATATTAATTAAATATAAATTATTATTTATAATAATTATAATTAATTATATATTATTTATTTAATTAGATGCCTCGAAAAGCGTGAAACCCTTTTTCTTTTTCCCTTCTTCTCCTTCGCGATTCCTCTGCCGCACCTTGCCTCAGCCGTCCCAACTTTCAGCCGCCATACGCATCCCTCCAGCCGCAGCCGCCGCGAGTCGCCAGCTGCCGCGCGCCGGTTGCCGCCGCGGTATCGATTCGTTGTTAAAATTGGGGTAAGATTGGGTTTTCGTTTGAGGTTCTTTAAGTTTAGTTATGCTCAACAAGCCTGACTTCATTGTATTGGTATTTTTGTTTCCTTTCGTGGATTTTAGGCAAGACCGTTGTGGGCTTTGGTTGAATTTTGGAGCGCAATTGTTACTGTTATTTCAAGTAAGTGATTCTACTGCTGGCAAACAGTTTCACATATGTTTGGCAGTTCACAGTATGTTTGGCAATTTCATAGTATGTTTATTTTTCAGACCATTGGCATGTATGATTTGTCTGGCTTTTATCTACTGTTGAGAATTTACCAGTTTACCAGTATGCTATGCATGATTTAATTTGATGCCAACGCCGTAGTCCCATGCTATATTATTAATTGAACTACCTTCAGTTTTGACGGTGTGCCACCAGGCCACTAGACCTGTGGACCGACGGGTTCTCATCAGGTTCATCTTCAGTTTTGACGGTGTGCCATCAGGCCACTAGACCTGTGGACCGACGGGTTCTCATTAGGTTCATCTCCAGTTTTGACGATGTGCCCTCAGGCCACTATGCTAGGCATGGTGACGGGGCAGTTGGCCTACAGATCTAGGAATCCCAGCAGTGGGATTACTTACTGAGTTTTATACTCATTCAATTGAAATTTCGTGTTTTCAGGTAAAGGTAGGAACGGACCGGCGGGCGACAGACAGAATCCATGACCGGGCTAAATAGAGACACGAGGGAGCTTCCGCATTTCATTATTCATGATATTTTTATTCTTTTTGTGAAGTTAATTTTGTGAAGGATTATTTCTTTTATTCTTTTTATTCATTAACTAAGTTCAGCTATTCAAATTTAATGAAATTATTTGTTTGGTAAATGTCTTTTATTTTGGTCAAATATATTAAAGGAGTCGTTTTGAAACGTATGCATGCATGAGGTAGCGATTCTTAGAAAGCTGGGTCGCTACAGAATCATTTCATTTGTCCATTTAATTGGGTCATTATTAATTTATTCTACCCAATATCTACTTTCGATTTAATTAAATCTTACTTCTCAATTTAGAATGTGAATCACTCTAATTTTAGAACATCCTTTAGCTTATGACATTAATGACAATATAACACATAATCAAAATTTCAAGTCAAGAAACATAAGCATAAAATTTTAGTAAATAGTCTTCCATCAAATAACACTTGGTGTGTTAATTAGAAGGAAGTGGATTTAGAGCATACATACCAATAGATGGGCAATTGAATCTCCAAAAGTTTTGACCACATAAACTGCAAGGTCAAAAGTGGTACATCCATTGGAATATAATTACATCCTCCAATGGTGAAAGGATACCATGATTTCCATTTATTTGGGCTCTTGTCACCCTTGCTAGGCTGCTTCTAGATTTCAATACTTGCAAGTTTAATTTCCACCTCAAGCTCCCAATGATCTAGATAAATTTCAATCAAACCCGAGTCATTACTGCATTTCAAGAAGGAAAGAAGAAAAAAGAAAAAAAAAGAAGAAGAAAAGAAATCAATAAATTGATTTCCAATAAAATCTTCAATCCTTACCTCAGCTTAGTCTCCATTGACATTCAGATTTTGTTTGTTTCCCACTCGATCATCCTCCTCTCCTCTCTCCACCATGGATTATATAGCATAAGAACTTAAAAAACCCTTTTTCTCTCTCTACAAAAAGATCAACGAAGAAAATCTCTTAGCTCTGCTTTATCAATTCTCTGTGGATTTGCTTCAACTTGTAAACACCATTTCAGAATGGTTGAACTTTGAAATTCAGATAGATTTGGGAGCGAATTTGATCGACATTTGAGAATGAATTTTGCTTTCAAATTGTTAGTTCTAAATGTAGATTGTTGTGTCGTGGAATGACCACTGCCTTGAAAGCAAATTGCGGCACGACCACGGTGCTACATCGTTTTTTGCCGATTGCTCCCCAAGGTTAACACAACACCCTTCTCAGATGTGCACTCATCGCAGAAGGATTGGAATCAATAGGAAAATTATGCTTAGATTCAATAAAAGAAAAGTATATAATTCTCTCTTTTTTCAAACATGTTTTCCAATCTTTTTAATAATAATAATAATAAAAAACGTTTTAGATCTGAATTAAATACTAAAAATGTTTCAGATCTAAATATAAAAATGTTTTTTTTATCTAAATTAAATACGAAAAACGTTTCAAGATTTAAATTAAATTAAATGAAGAAATACATTTTTTTAAATCTTGGGGATTAAACACTTATAAATCTTTTAACGTGAGATAAAAGCAAAAATAAAACTTTTATGACAAGTCATTCTAACAATTGACTAGTCATTCCCAACACATGGAACCATACACGCGCTATGGGTGCAAAGAAAAAGGGTTCGGGCCACGATATCGATGTGGAAAATGTGATTTTGACCTCCACGAAGCTTGCACTTATGATCGAATTGCACCTGTTTCGCATGAATATTTCCCCGGTTCGAAGTTCAAGTTCCTTAGAAACCCACCAAAACCCTGCCAACCAGAATGCATAATCAGGTGCGACGCTTGTAGAAAAACCATCAAAGGCTTCGTTTTCCATTGCGAGGAAGATGACTTAGATCTCCACCCATGTTGCCGAAACCTCAAAAGAAGTTACCAAATCGAAGATGTGAAATTCAATCTTCACAAGAAGGTGAGAGGGAAATGCATGTGGTGCAATAGGAAGAGCCTTAAAGATGGTGGTAATGATAATGGGTGGTCCTACGTGTCTGAGTGTGGGAACTACCATGTTCATGTCGCTTGTGTTACTGAAATGGCTTTGGAAGAATGGTACAATTACAACAACAACAAGCGCAACAATGGAGGAAGCAGTAGTAGTAGCAGTAGTGGTAGCATTAGAGTGATGAAGAGTACTACTACTACTGCAAGATAATCTTTGTCTGTAAAGTTGAAACTGCAAGAAATTCAAGCTCGAGGGCGTGGGAATGGAGGAGCGAAGGACAAGCTTTGGGGAATTCTAAAGTTCATCATTAAGACTGTTGTTAGTATTGTTATTGGAGATCCTACTATGATTGTGGCCTCTTTCTTTGTCGAGCTACTTCCATGA ATGGCTTGCACTTATGATCGAATTGCACCTGTTTCGCATGAATATTTCCCCGGTTCGAAGTTCAAGTTCCTTAGAAACCCACCAAAACCCTGCCAACCAGAATGCATAATCAGGTGCGACGCTTGTAGAAAAACCATCAAAGGCTTCGTTTTCCATTGCGAGGAAGATGACTTAGATCTCCACCCATGTTGCCGAAACCTCAAAAGAAGTTACCAAATCGAAGATGTGAAATTCAATCTTCACAAGAAGGTGAGAGGGAAATGCATGTGGTGCAATAGGAAGAGCCTTAAAGATGGTGGTAATGATAATGGGTGGTCCTACGTGTCTGAGTGTGGGAACTACCATGTTCATGTCGCTTGTGTTACTGAAATGGCTTTGGAAGAATGGTACAATTACAACAACAACAAGCGCAACAATGGAGGAAGCAGTAGTAGTAGCAGTAGTGGTAGCATTAGATTGAAACTGCAAGAAATTCAAGCTCGAGGGCGTGGGAATGGAGGAGCGAAGGACAAGCTTTGGGGAATTCTAAAGTTCATCATTAAGACTGTTGTTAGTATTGTTATTGGAGATCCTACTATGATTGTGGCCTCTTTCTTTGTCGAGCTACTTCCATGA ATGGCTTGCACTTATGATCGAATTGCACCTGTTTCGCATGAATATTTCCCCGGTTCGAAGTTCAAGTTCCTTAGAAACCCACCAAAACCCTGCCAACCAGAATGCATAATCAGGTGCGACGCTTGTAGAAAAACCATCAAAGGCTTCGTTTTCCATTGCGAGGAAGATGACTTAGATCTCCACCCATGTTGCCGAAACCTCAAAAGAAGTTACCAAATCGAAGATGTGAAATTCAATCTTCACAAGAAGGTGAGAGGGAAATGCATGTGGTGCAATAGGAAGAGCCTTAAAGATGGTGGTAATGATAATGGGTGGTCCTACGTGTCTGAGTGTGGGAACTACCATGTTCATGTCGCTTGTGTTACTGAAATGGCTTTGGAAGAATGGTACAATTACAACAACAACAAGCGCAACAATGGAGGAAGCAGTAGTAGTAGCAGTAGTGGTAGCATTAGATTGAAACTGCAAGAAATTCAAGCTCGAGGGCGTGGGAATGGAGGAGCGAAGGACAAGCTTTGGGGAATTCTAAAGTTCATCATTAAGACTGTTGTTAGTATTGTTATTGGAGATCCTACTATGATTGTGGCCTCTTTCTTTGTCGAGCTACTTCCATGA MACTYDRIAPVSHEYFPGSKFKFLRNPPKPCQPECIIRCDACRKTIKGFVFHCEEDDLDLHPCCRNLKRSYQIEDVKFNLHKKVRGKCMWCNRKSLKDGGNDNGWSYVSECGNYHVHVACVTEMALEEWYNYNNNKRNNGGSSSSSSSGSIRLKLQEIQARGRGNGGAKDKLWGILKFIIKTVVSIVIGDPTMIVASFFVELLP
BLAST of Lsi02G016420 vs. TrEMBL
Match: A0A0A0KNV1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G515560 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 1.2e-81 Identity = 151/209 (72.25%), Postives = 170/209 (81.34%), Query Frame = 1
BLAST of Lsi02G016420 vs. TrEMBL
Match: A0A0A0KS98_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517070 PE=4 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 9.8e-68 Identity = 118/202 (58.42%), Postives = 149/202 (73.76%), Query Frame = 1
BLAST of Lsi02G016420 vs. TrEMBL
Match: A0A0A0KNT1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G516820 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 1.1e-61 Identity = 109/204 (53.43%), Postives = 145/204 (71.08%), Query Frame = 1
BLAST of Lsi02G016420 vs. TrEMBL
Match: A0A0A0KQX2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G516560 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 5.4e-58 Identity = 99/118 (83.90%), Postives = 108/118 (91.53%), Query Frame = 1
BLAST of Lsi02G016420 vs. TrEMBL
Match: A0A0A0KU87_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G515310 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 1.9e-55 Identity = 110/202 (54.46%), Postives = 138/202 (68.32%), Query Frame = 1
BLAST of Lsi02G016420 vs. TAIR10
Match: AT2G16050.1 (AT2G16050.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 99.0 bits (245), Expect = 3.6e-21 Identity = 59/195 (30.26%), Postives = 87/195 (44.62%), Query Frame = 1
BLAST of Lsi02G016420 vs. NCBI nr
Match: gi|449450169|ref|XP_004142836.1| (PREDICTED: uncharacterized protein LOC101213594 [Cucumis sativus]) HSP 1 Score: 360.9 bits (925), Expect = 1.4e-96 Identity = 173/223 (77.58%), Postives = 189/223 (84.75%), Query Frame = 1
BLAST of Lsi02G016420 vs. NCBI nr
Match: gi|659118057|ref|XP_008458931.1| (PREDICTED: uncharacterized protein LOC103498191 [Cucumis melo]) HSP 1 Score: 330.5 bits (846), Expect = 2.1e-87 Identity = 156/214 (72.90%), Postives = 174/214 (81.31%), Query Frame = 1
BLAST of Lsi02G016420 vs. NCBI nr
Match: gi|659118059|ref|XP_008458932.1| (PREDICTED: uncharacterized protein LOC103498192 [Cucumis melo]) HSP 1 Score: 325.5 bits (833), Expect = 6.7e-86 Identity = 156/210 (74.29%), Postives = 175/210 (83.33%), Query Frame = 1
BLAST of Lsi02G016420 vs. NCBI nr
Match: gi|449450167|ref|XP_004142835.1| (PREDICTED: uncharacterized protein LOC101213357 [Cucumis sativus]) HSP 1 Score: 310.8 bits (795), Expect = 1.7e-81 Identity = 151/209 (72.25%), Postives = 170/209 (81.34%), Query Frame = 1
BLAST of Lsi02G016420 vs. NCBI nr
Match: gi|659118053|ref|XP_008458928.1| (PREDICTED: uncharacterized protein LOC103498189 [Cucumis melo]) HSP 1 Score: 266.5 bits (680), Expect = 3.7e-68 Identity = 118/202 (58.42%), Postives = 148/202 (73.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |