Lsi02G015350 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi02G015350
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionMatrix metalloproteinase
Locationchr02 : 21205735 .. 21206405 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACACGTTCGACGATGCCTTAGAATCTGCCATTAAATCGTACCAAAAACGCTTCAACCTCAACATGAGCGGGATTTTGGACAAAGAAACATTAGCTCAATTCTCCAAACCTAGATGTGGGGTACCGGATTCCTTCAACTCCAACTCGAACAAGAATCATGAGGATGATCTCAAAATGACATCTCATTACACTTTCTTCCCAGACAACCTAAGATGGCCAAATACCAAATTCAATCTAACCTACACATTTATTAACAATTACCCATTAAACTTTGTGCCGCCAGTGACTCGGGCTTTGGCTGCATGGGCAGCTAACTCACAATTCACATTCTCAGAAGCTGTGGAGGGACAAATGGCTGACATTAATATCAGCTTTCAAAGAGGGGAGCATGGAGATGAGAATCCTTTTGATGGGCCTGGGGGAATTTTGGCTCATGCTTTTGCACCAACTGATGGGAGATTGCATTTTGATGGGGATGAGAGTTGGGCTGCGGGAGTGGTTGCTAATGAGTTAATTGTGGAGACTGTGGCACTTCATGAGCTTGGACATGTTCTTGGGCTTGGCCATAGCTCCATTGAACAAGCCATCCTGTGGCCCTATATTGAGCCTGGTTCCACCAAGGGCTTGAATGATGATGATATCGCTGGACTTCGTGCTTTGTATGCCTAA

mRNA sequence

ATGACACAATCTGCCATTAAATCGTACCAAAAACGCTTCAACCTCAACATGAGCGGGATTTTGGACAAAGAAACATTAGCTCAATTCTCCAAACCTAGATGTGGGGTACCGGATTCCTTCAACTCCAACTCGAACAAGAATCATGAGGATGATCTCAAAATGACATCTCATTACACTTTCTTCCCAGACAACCTAAGATGGCCAAATACCAAATTCAATCTAACCTACACATTTATTAACAATTACCCATTAAACTTTGTGCCGCCAGTGACTCGGGCTTTGGCTGCATGGGCAGCTAACTCACAATTCACATTCTCAGAAGCTGTGGAGGGACAAATGGCTGACATTAATATCAGCTTTCAAAGAGGGGAGCATGGAGATGAGAATCCTTTTGATGGGCCTGGGGGAATTTTGGCTCATGCTTTTGCACCAACTGATGGGAGATTGCATTTTGATGGGGATGAGAGTTGGGCTGCGGGAGTGGTTGCTAATGAGTTAATTGTGGAGACTGTGGCACTTCATGAGCTTGGACATGTTCTTGGGCTTGGCCATAGCTCCATTGAACAAGCCATCCTGTGGCCCTATATTGAGCCTGGTTCCACCAAGGGCTTGAATGATGATGATATCGCTGGACTTCGTGCTTTGTATGCCTAA

Coding sequence (CDS)

ATGACACAATCTGCCATTAAATCGTACCAAAAACGCTTCAACCTCAACATGAGCGGGATTTTGGACAAAGAAACATTAGCTCAATTCTCCAAACCTAGATGTGGGGTACCGGATTCCTTCAACTCCAACTCGAACAAGAATCATGAGGATGATCTCAAAATGACATCTCATTACACTTTCTTCCCAGACAACCTAAGATGGCCAAATACCAAATTCAATCTAACCTACACATTTATTAACAATTACCCATTAAACTTTGTGCCGCCAGTGACTCGGGCTTTGGCTGCATGGGCAGCTAACTCACAATTCACATTCTCAGAAGCTGTGGAGGGACAAATGGCTGACATTAATATCAGCTTTCAAAGAGGGGAGCATGGAGATGAGAATCCTTTTGATGGGCCTGGGGGAATTTTGGCTCATGCTTTTGCACCAACTGATGGGAGATTGCATTTTGATGGGGATGAGAGTTGGGCTGCGGGAGTGGTTGCTAATGAGTTAATTGTGGAGACTGTGGCACTTCATGAGCTTGGACATGTTCTTGGGCTTGGCCATAGCTCCATTGAACAAGCCATCCTGTGGCCCTATATTGAGCCTGGTTCCACCAAGGGCTTGAATGATGATGATATCGCTGGACTTCGTGCTTTGTATGCCTAA

Protein sequence

MTQSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFPDNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALYA
Homology
[Close]
BLAST of Lsi02G015350 vs. Swiss-Prot
Match: MEP1_SOYBN (Metalloendoproteinase 1 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 185.3 bits (469), Expect = 7.2e-46
Identity = 105/222 (47.30%), Postives = 125/222 (56.31%), Query Frame = 1 

Query: 4   SAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFPD 63
           SAIK+YQK +NLN++G  D  TL Q   PRCGVPD      N N      M S YTFF D
Sbjct: 83  SAIKTYQKNYNLNVTGKFDINTLKQIMTPRCGVPDII---INTNKTTSFGMISDYTFFKD 142

Query: 64  NLRWPNTKFNLTYTFINNYPLN--FVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQ 123
             RW      LTY F     L+  F   + RA + W       F E    + A+I I F 
Sbjct: 143 MPRWQAGTTQLTYAFSPEPRLDDTFKSAIARAFSKWTPVVNIAFQETTSYETANIKILFA 202

Query: 124 RGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAA------GVVANELIVETVALHE 183
              HGD  PFDGPGGIL HAFAPTDGR HFD DE W A        V +   +E+VA+HE
Sbjct: 203 SKNHGDPYPFDGPGGILGHAFAPTDGRCHFDADEYWVASGDVTKSPVTSAFDLESVAVHE 262

Query: 184 LGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
           +GH+LGLGHSS  +AI++P I P + K  L  DDI G+R LY
Sbjct: 263 IGHLLGLGHSSDLRAIMYPSIPPRTRKVNLAQDDIDGIRKLY 301

[Close]
BLAST of Lsi02G015350 vs. Swiss-Prot
Match: 5MMP_ARATH (Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana GN=5MMP PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.7e-45
Identity = 103/226 (45.58%), Postives = 130/226 (57.52%), Query Frame = 1 

Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           QSAI +YQK FNL ++G LD  TL Q  KPRCG PD  +  S  N    L+ T  Y+FFP
Sbjct: 88  QSAINTYQKNFNLKVTGKLDSSTLRQIVKPRCGNPDLIDGVSEMNGGKILRTTEKYSFFP 147

Query: 63  DNLRWPNTKFNLTYTFI--NNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISF 122
              RWP  K +LTY F   NN         +RA   WA  +   F+ +     ADI I F
Sbjct: 148 GKPRWPKRKRDLTYAFAPQNNLTDEVKRVFSRAFTRWAEVTPLNFTRSESILRADIVIGF 207

Query: 123 QRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESW--AAGVVANELI-------VETV 182
             GEHGD  PFDG  G LAHA +P  G LH DGDE W  + G ++  ++       +E+V
Sbjct: 208 FSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRRILPVTTVVDLESV 267

Query: 183 ALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
           A+HE+GH+LGLGHSS+E AI++P I  G  K  L  DDI G++ LY
Sbjct: 268 AVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLY 313

[Close]
BLAST of Lsi02G015350 vs. Swiss-Prot
Match: 3MMP_ARATH (Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana GN=3MMP PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.7e-39
Identity = 90/237 (37.97%), Postives = 125/237 (52.74%), Query Frame = 1 

Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKN------------HED 62
           ++A++ YQ+ F LN++G+LD+ TL     PRCG PD  N  S  +               
Sbjct: 92  KNAVEMYQRNFQLNVTGVLDELTLKHVVIPRCGNPDVVNGTSTMHSGRKTFEVSFAGRGQ 151

Query: 63  DLKMTSHYTFFPDNLRWPNTKFNLTYTFINNYPLN--FVPPVTRALAAWAANSQFTFSEA 122
                 HY+FFP   RWP  + +LTY F     L        +RA   W   +  TF+  
Sbjct: 152 RFHAVKHYSFFPGEPRWPRNRRDLTYAFDPRNALTEEVKSVFSRAFTRWEEVTPLTFTRV 211

Query: 123 VEGQMADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAG-------- 182
                +DI+I F  GEHGD  PFDGP   LAHAF+P  G  H DG+E+W           
Sbjct: 212 ERFSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFI 271

Query: 183 VVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
            V+  + +E+VA+HE+GH+LGLGHSS+E +I++P I  G  K  L  DD+ G++ LY
Sbjct: 272 SVSEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLY 328

[Close]
BLAST of Lsi02G015350 vs. Swiss-Prot
Match: 2MMP_ARATH (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana GN=2MMP PE=1 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-38
Identity = 91/235 (38.72%), Postives = 126/235 (53.62%), Query Frame = 1 

Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNS------NKNHEDDLKMT- 62
           ++A++ YQ  FNLN++G LD  T+     PRCG PD  N  S       K  E +   T 
Sbjct: 89  KAAVELYQTNFNLNVTGELDALTIQHIVIPRCGNPDVVNGTSLMHGGRRKTFEVNFSRTH 148

Query: 63  ----SHYTFFPDNLRWPNTKFNLTYTFINNYPLN--FVPPVTRALAAWAANSQFTFSEAV 122
                 YT FP   RWP  + +LTY F    PL        +RA   W+  +   F+ + 
Sbjct: 149 LHAVKRYTLFPGEPRWPRNRRDLTYAFDPKNPLTEEVKSVFSRAFGRWSDVTALNFTLSE 208

Query: 123 EGQMADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAG-------VV 182
               +DI I F  G+HGD  PFDG  G LAHAF+P  G+ H D DE+W           V
Sbjct: 209 SFSTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLSV 268

Query: 183 ANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
              + +E+VA+HE+GH+LGLGHSS+E++I++P I  G  K  L +DD+ G++ LY
Sbjct: 269 TAAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLY 323

[Close]
BLAST of Lsi02G015350 vs. Swiss-Prot
Match: 4MMP_ARATH (Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana GN=4MMP PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 8.0e-37
Identity = 88/226 (38.94%), Postives = 122/226 (53.98%), Query Frame = 1 

Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           + A+  YQK   L ++G  D +TL+Q   PRCG PD     +   H         Y +FP
Sbjct: 75  EQALVRYQKNLGLPITGKPDSDTLSQILLPRCGFPDDVEPKTAPFHTG-----KKYVYFP 134

Query: 63  DNLRWP-NTKFNLTYTFINNYPLNFVPPVT------RALAAWAANSQFTFSEAVEGQMAD 122
              RW  +    LTY F       ++ P        RA   WA+    +F E  +  +AD
Sbjct: 135 GRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVSFIETEDYVIAD 194

Query: 123 INISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIV----ETV 182
           I I F  G+HGD  PFDG  G+LAH F+P +GRLH D  E+WA      +  V    E+V
Sbjct: 195 IKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEKSSVAVDLESV 254

Query: 183 ALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
           A+HE+GHVLGLGHSS++ A ++P ++P S K  LN DD+ G+++LY
Sbjct: 255 AVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLY 295

[Close]
BLAST of Lsi02G015350 vs. TrEMBL
Match: A0A0A0KNY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G522910 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.5e-77
Identity = 140/214 (65.42%), Postives = 169/214 (78.97%), Query Frame = 1 

Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           +SAIK YQK  +LN+SGILD+ETL Q  KPRCGV D F  NSNKN EDDL+M+SHYT FP
Sbjct: 81  ESAIKLYQKWSHLNVSGILDQETLDQMFKPRCGVRDVFKFNSNKNLEDDLEMSSHYTLFP 140

Query: 63  DNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQR 122
            NL+WP+ K +LTY F NN+P++FVP VT A+A WAA S FTFSEA + Q ADINISFQ 
Sbjct: 141 GNLKWPDYKRHLTYVFTNNFPVDFVPSVTEAMARWAAQSLFTFSEASDAQSADINISFQI 200

Query: 123 GEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGL 182
            +H D  PFDGPGG++ HAFAPTDGRLH DGD++W+AG+   ++ V  VALHELGHVLGL
Sbjct: 201 KDHADGLPFDGPGGVVGHAFAPTDGRLHLDGDDTWSAGMEVQKVNVMNVALHELGHVLGL 260

Query: 183 GHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALY 217
            HS++ QA++WPYI+  + K LNDDDIAGL ALY
Sbjct: 261 AHSTLPQAVMWPYIDSNALKNLNDDDIAGLHALY 294

[Close]
BLAST of Lsi02G015350 vs. TrEMBL
Match: A0A0A0KVD8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G633150 PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.6e-74
Identity = 134/214 (62.62%), Postives = 167/214 (78.04%), Query Frame = 1 

Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           +SAI+ YQK  +LN+SGILD+ETL Q  + RCG+ D F  NS+KN EDDL+M+SHY  FP
Sbjct: 80  ESAIRLYQKWSHLNVSGILDQETLDQMFQQRCGIRDVFKFNSSKNLEDDLEMSSHYVLFP 139

Query: 63  DNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQR 122
           +N +WP+ K +LTY F NN+P++FVP VT A+A WAA S FTFSEA + Q ADINISFQ 
Sbjct: 140 NNKKWPDYKRHLTYMFTNNFPVDFVPSVTEAMARWAAQSLFTFSEASDAQSADINISFQV 199

Query: 123 GEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGL 182
            +H D + FDGPGG++ HAFAPTDGRLH DGD+SW+AG+  N+  V  VALHELGHVLGL
Sbjct: 200 KDHADGSAFDGPGGVVGHAFAPTDGRLHLDGDDSWSAGLEENKFNVMNVALHELGHVLGL 259

Query: 183 GHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALY 217
            HS++ QA++WPYI+  + K LNDDDIAGL ALY
Sbjct: 260 AHSTLPQAVMWPYIDSNALKNLNDDDIAGLHALY 293

[Close]
BLAST of Lsi02G015350 vs. TrEMBL
Match: A0A0A0KX71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G631560 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 4.4e-74
Identity = 132/214 (61.68%), Postives = 167/214 (78.04%), Query Frame = 1 

Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           +SAI+ YQK  +LN+SGI+D+ETL Q  +PRCGVPD F  NS+KN EDDL+M+SHY  FP
Sbjct: 81  ESAIRLYQKWSHLNVSGIIDQETLDQMFQPRCGVPDVFKFNSSKNLEDDLEMSSHYALFP 140

Query: 63  DNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQR 122
           +N +WP+ K +LTY F NN+P++FVP +T A+A WAA S FTFSEA + Q ADINISFQ 
Sbjct: 141 NNEKWPDYKRHLTYMFTNNFPIDFVPSMTEAMARWAAQSLFTFSEASDAQSADINISFQV 200

Query: 123 GEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGL 182
            +H D   FDGPGG++ HAFAPTDGRLH DGD++W+AG+   ++ V   ALHELGHVLGL
Sbjct: 201 KDHADGFAFDGPGGVVGHAFAPTDGRLHLDGDDTWSAGLEEKKVNVMNAALHELGHVLGL 260

Query: 183 GHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALY 217
            HS++ QA++WPYIE  + K LNDDDIAG+ ALY
Sbjct: 261 AHSTLPQAVMWPYIESNALKNLNDDDIAGIHALY 294

[Close]
BLAST of Lsi02G015350 vs. TrEMBL
Match: Q9LEL9_CUCSA (Matrix metalloproteinase OS=Cucumis sativus GN=MMP-1 PE=2 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.7e-65
Identity = 119/222 (53.60%), Postives = 157/222 (70.72%), Query Frame = 1 

Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSF--------NSNSNKNHEDDLKM 62
           +SA+K+YQ   NL  SGILD  T+AQ + PRCGV D          N N   N       
Sbjct: 97  ESALKTYQTNHNLAPSGILDSNTIAQIAMPRCGVQDVIKNKKTKKRNQNFTNNGHTHFHK 156

Query: 63  TSHYTFFPDNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMA 122
            SH+TFF  NL+WP++K +L+Y F+ NYP++ + PV+RA + W+ N+ F FS   + + A
Sbjct: 157 VSHFTFFEGNLKWPSSKLHLSYGFLPNYPIDAIKPVSRAFSKWSLNTHFKFSHVADYRKA 216

Query: 123 DINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALH 182
           DI ISF+RGEHGD  PFDG GG+LAHA+APTDGRLHFDGD++W+ G ++    VETVALH
Sbjct: 217 DIKISFERGEHGDNAPFDGVGGVLAHAYAPTDGRLHFDGDDAWSVGAISGYFDVETVALH 276

Query: 183 ELGHVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALY 217
           E+GH+LGL HS+IE+AI++P I  G TKGL+ DDIAG++ALY
Sbjct: 277 EIGHILGLQHSTIEEAIMFPSIPEGVTKGLHGDDIAGIKALY 318

[Close]
BLAST of Lsi02G015350 vs. TrEMBL
Match: A0A0A0KU02_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G632080 PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 9.2e-64
Identity = 122/221 (55.20%), Postives = 154/221 (69.68%), Query Frame = 1 

Query: 1   MTQSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPD---SFNSNSNKNHEDDLKMTSH 60
           + +SAIK++QK  +LN+SG++D+ETL   S PRCG+PD   + N   N    +     SH
Sbjct: 74  LLESAIKTFQKYHSLNVSGVIDEETLTLMSLPRCGIPDIMHNINVMDNNVQMNSSSFHSH 133

Query: 61  YTFFPDNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADIN 120
           +TFFPDNL+WP +K+NL YTF++++P +F  PV  A+  WA  S F FSEAVE Q ADI 
Sbjct: 134 FTFFPDNLKWPVSKYNLRYTFLDDFPNDFKEPVMNAMEQWALFSLFRFSEAVEAQEADIT 193

Query: 121 ISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELG 180
            +F RG HGD  PFDG GG+LAHAF P DGR+HFD DE WA G V   + V  VALHELG
Sbjct: 194 FNFVRGNHGDGYPFDGKGGVLAHAFGPLDGRVHFDWDEDWADGSVGGFINVGMVALHELG 253

Query: 181 HVLGLGHSSIEQAILWPYIEPG-STKGLNDDDIAGLRALYA 218
           HVLGL HS+I  AI+WPY+E G  T+GL  DDI G++ LYA
Sbjct: 254 HVLGLAHSTIRDAIMWPYMEAGEQTRGLQFDDIEGIQTLYA 294

[Close]
BLAST of Lsi02G015350 vs. TAIR10
Match: AT1G59970.1 (AT1G59970.1 Matrixin family protein)

HSP 1 Score: 182.6 bits (462), Expect = 2.6e-46
Identity = 103/226 (45.58%), Postives = 130/226 (57.52%), Query Frame = 1 

Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           QSAI +YQK FNL ++G LD  TL Q  KPRCG PD  +  S  N    L+ T  Y+FFP
Sbjct: 88  QSAINTYQKNFNLKVTGKLDSSTLRQIVKPRCGNPDLIDGVSEMNGGKILRTTEKYSFFP 147

Query: 63  DNLRWPNTKFNLTYTFI--NNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISF 122
              RWP  K +LTY F   NN         +RA   WA  +   F+ +     ADI I F
Sbjct: 148 GKPRWPKRKRDLTYAFAPQNNLTDEVKRVFSRAFTRWAEVTPLNFTRSESILRADIVIGF 207

Query: 123 QRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESW--AAGVVANELI-------VETV 182
             GEHGD  PFDG  G LAHA +P  G LH DGDE W  + G ++  ++       +E+V
Sbjct: 208 FSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRRILPVTTVVDLESV 267

Query: 183 ALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
           A+HE+GH+LGLGHSS+E AI++P I  G  K  L  DDI G++ LY
Sbjct: 268 AVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLY 313

[Close]
BLAST of Lsi02G015350 vs. TAIR10
Match: AT1G24140.1 (AT1G24140.1 Matrixin family protein)

HSP 1 Score: 164.1 bits (414), Expect = 9.7e-41
Identity = 90/237 (37.97%), Postives = 125/237 (52.74%), Query Frame = 1 

Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKN------------HED 62
           ++A++ YQ+ F LN++G+LD+ TL     PRCG PD  N  S  +               
Sbjct: 92  KNAVEMYQRNFQLNVTGVLDELTLKHVVIPRCGNPDVVNGTSTMHSGRKTFEVSFAGRGQ 151

Query: 63  DLKMTSHYTFFPDNLRWPNTKFNLTYTFINNYPLN--FVPPVTRALAAWAANSQFTFSEA 122
                 HY+FFP   RWP  + +LTY F     L        +RA   W   +  TF+  
Sbjct: 152 RFHAVKHYSFFPGEPRWPRNRRDLTYAFDPRNALTEEVKSVFSRAFTRWEEVTPLTFTRV 211

Query: 123 VEGQMADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAG-------- 182
                +DI+I F  GEHGD  PFDGP   LAHAF+P  G  H DG+E+W           
Sbjct: 212 ERFSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFI 271

Query: 183 VVANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
            V+  + +E+VA+HE+GH+LGLGHSS+E +I++P I  G  K  L  DD+ G++ LY
Sbjct: 272 SVSEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLY 328

[Close]
BLAST of Lsi02G015350 vs. TAIR10
Match: AT1G70170.1 (AT1G70170.1 matrix metalloproteinase)

HSP 1 Score: 161.4 bits (407), Expect = 6.3e-40
Identity = 91/235 (38.72%), Postives = 126/235 (53.62%), Query Frame = 1 

Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNS------NKNHEDDLKMT- 62
           ++A++ YQ  FNLN++G LD  T+     PRCG PD  N  S       K  E +   T 
Sbjct: 89  KAAVELYQTNFNLNVTGELDALTIQHIVIPRCGNPDVVNGTSLMHGGRRKTFEVNFSRTH 148

Query: 63  ----SHYTFFPDNLRWPNTKFNLTYTFINNYPLN--FVPPVTRALAAWAANSQFTFSEAV 122
                 YT FP   RWP  + +LTY F    PL        +RA   W+  +   F+ + 
Sbjct: 149 LHAVKRYTLFPGEPRWPRNRRDLTYAFDPKNPLTEEVKSVFSRAFGRWSDVTALNFTLSE 208

Query: 123 EGQMADINISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAG-------VV 182
               +DI I F  G+HGD  PFDG  G LAHAF+P  G+ H D DE+W           V
Sbjct: 209 SFSTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLSV 268

Query: 183 ANELIVETVALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
              + +E+VA+HE+GH+LGLGHSS+E++I++P I  G  K  L +DD+ G++ LY
Sbjct: 269 TAAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLY 323

[Close]
BLAST of Lsi02G015350 vs. TAIR10
Match: AT2G45040.1 (AT2G45040.1 Matrixin family protein)

HSP 1 Score: 155.2 bits (391), Expect = 4.5e-38
Identity = 88/226 (38.94%), Postives = 122/226 (53.98%), Query Frame = 1 

Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           + A+  YQK   L ++G  D +TL+Q   PRCG PD     +   H         Y +FP
Sbjct: 75  EQALVRYQKNLGLPITGKPDSDTLSQILLPRCGFPDDVEPKTAPFHTG-----KKYVYFP 134

Query: 63  DNLRWP-NTKFNLTYTFINNYPLNFVPPVT------RALAAWAANSQFTFSEAVEGQMAD 122
              RW  +    LTY F       ++ P        RA   WA+    +F E  +  +AD
Sbjct: 135 GRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVSFIETEDYVIAD 194

Query: 123 INISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIV----ETV 182
           I I F  G+HGD  PFDG  G+LAH F+P +GRLH D  E+WA      +  V    E+V
Sbjct: 195 IKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEKSSVAVDLESV 254

Query: 183 ALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
           A+HE+GHVLGLGHSS++ A ++P ++P S K  LN DD+ G+++LY
Sbjct: 255 AVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLY 295

[Close]
BLAST of Lsi02G015350 vs. TAIR10
Match: AT4G16640.1 (AT4G16640.1 Matrixin family protein)

HSP 1 Score: 153.3 bits (386), Expect = 1.7e-37
Identity = 89/226 (39.38%), Postives = 126/226 (55.75%), Query Frame = 1 

Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           +SAI  YQ+   L ++G LD  T+   S PRCGV D+  + +N    D L  T+HYT+F 
Sbjct: 99  ESAISLYQENLGLPITGRLDTSTVTLMSLPRCGVSDTHMTINN----DFLHTTAHYTYFN 158

Query: 63  DNLRWPNTKFNLTYTFINNYPLNFVPP------VTRALAAWAANSQFTFSEAVEGQMADI 122
              +W   +  LTY     + L+++          RA + W++    +F E  +   AD+
Sbjct: 159 GKPKW--NRDTLTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSFEEVDDFTTADL 218

Query: 123 NISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAA-----GVVANELIVETV 182
            I F  G+HGD  PFDG  G LAHAFAP +GRLH D  E+W       G     + +E+V
Sbjct: 219 KIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKGSSEVAVDLESV 278

Query: 183 ALHELGHVLGLGHSSIEQAILWPYIEPGSTK-GLNDDDIAGLRALY 217
           A HE+GH+LGLGHSS E A+++P + P + K  L  DD+AG+  LY
Sbjct: 279 ATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLY 318

[Close]
BLAST of Lsi02G015350 vs. NCBI nr
Match: gi|778708586|ref|XP_004142843.2| (PREDICTED: metalloendoproteinase 1-like [Cucumis sativus])

HSP 1 Score: 297.4 bits (760), Expect = 2.1e-77
Identity = 140/214 (65.42%), Postives = 169/214 (78.97%), Query Frame = 1 

Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           +SAIK YQK  +LN+SGILD+ETL Q  KPRCGV D F  NSNKN EDDL+M+SHYT FP
Sbjct: 81  ESAIKLYQKWSHLNVSGILDQETLDQMFKPRCGVRDVFKFNSNKNLEDDLEMSSHYTLFP 140

Query: 63  DNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQR 122
            NL+WP+ K +LTY F NN+P++FVP VT A+A WAA S FTFSEA + Q ADINISFQ 
Sbjct: 141 GNLKWPDYKRHLTYVFTNNFPVDFVPSVTEAMARWAAQSLFTFSEASDAQSADINISFQI 200

Query: 123 GEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGL 182
            +H D  PFDGPGG++ HAFAPTDGRLH DGD++W+AG+   ++ V  VALHELGHVLGL
Sbjct: 201 KDHADGLPFDGPGGVVGHAFAPTDGRLHLDGDDTWSAGMEVQKVNVMNVALHELGHVLGL 260

Query: 183 GHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALY 217
            HS++ QA++WPYI+  + K LNDDDIAGL ALY
Sbjct: 261 AHSTLPQAVMWPYIDSNALKNLNDDDIAGLHALY 294

[Close]
BLAST of Lsi02G015350 vs. NCBI nr
Match: gi|659118035|ref|XP_008458917.1| (PREDICTED: metalloendoproteinase 1-like [Cucumis melo])

HSP 1 Score: 287.3 bits (734), Expect = 2.2e-74
Identity = 133/215 (61.86%), Postives = 168/215 (78.14%), Query Frame = 1 

Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSF-NSNSNKNHEDDLKMTSHYTFF 62
           +SA+K YQK   LN+SGILD++TL Q  KPRCG+PD    SNSNKN EDDL+++SHY  F
Sbjct: 80  ESAVKLYQKWSKLNVSGILDQQTLDQIFKPRCGLPDVIMKSNSNKNTEDDLEISSHYALF 139

Query: 63  PDNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQ 122
           P N +WP+ K +LTYTF NN+P++FVP VT A+  WAA+S FTFS+A + Q+ DINISFQ
Sbjct: 140 PGNQKWPDYKRHLTYTFTNNFPIDFVPSVTEAMKEWAAHSLFTFSQAADDQVPDINISFQ 199

Query: 123 RGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLG 182
            G+HGD  PFDGPGG++ HAFAPTDGRLH DGD+ W+AG+   ++ V   ALHELGHVLG
Sbjct: 200 VGDHGDGVPFDGPGGVVGHAFAPTDGRLHLDGDDKWSAGLETQKVNVMNAALHELGHVLG 259

Query: 183 LGHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALY 217
           L HS+++QA++WPYI+  + K L DDDIAGL ALY
Sbjct: 260 LAHSTVQQAVMWPYIDVYALKALTDDDIAGLTALY 294

[Close]
BLAST of Lsi02G015350 vs. NCBI nr
Match: gi|778708752|ref|XP_011656276.1| (PREDICTED: metalloendoproteinase 1-like [Cucumis sativus])

HSP 1 Score: 286.6 bits (732), Expect = 3.7e-74
Identity = 134/214 (62.62%), Postives = 167/214 (78.04%), Query Frame = 1 

Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           +SAI+ YQK  +LN+SGILD+ETL Q  + RCG+ D F  NS+KN EDDL+M+SHY  FP
Sbjct: 80  ESAIRLYQKWSHLNVSGILDQETLDQMFQQRCGIRDVFKFNSSKNLEDDLEMSSHYVLFP 139

Query: 63  DNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQR 122
           +N +WP+ K +LTY F NN+P++FVP VT A+A WAA S FTFSEA + Q ADINISFQ 
Sbjct: 140 NNKKWPDYKRHLTYMFTNNFPVDFVPSVTEAMARWAAQSLFTFSEASDAQSADINISFQV 199

Query: 123 GEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGL 182
            +H D + FDGPGG++ HAFAPTDGRLH DGD+SW+AG+  N+  V  VALHELGHVLGL
Sbjct: 200 KDHADGSAFDGPGGVVGHAFAPTDGRLHLDGDDSWSAGLEENKFNVMNVALHELGHVLGL 259

Query: 183 GHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALY 217
            HS++ QA++WPYI+  + K LNDDDIAGL ALY
Sbjct: 260 AHSTLPQAVMWPYIDSNALKNLNDDDIAGLHALY 293

[Close]
BLAST of Lsi02G015350 vs. NCBI nr
Match: gi|778708729|ref|XP_004142460.2| (PREDICTED: metalloendoproteinase 1-like [Cucumis sativus])

HSP 1 Score: 285.8 bits (730), Expect = 6.3e-74
Identity = 132/214 (61.68%), Postives = 167/214 (78.04%), Query Frame = 1 

Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSFNSNSNKNHEDDLKMTSHYTFFP 62
           +SAI+ YQK  +LN+SGI+D+ETL Q  +PRCGVPD F  NS+KN EDDL+M+SHY  FP
Sbjct: 81  ESAIRLYQKWSHLNVSGIIDQETLDQMFQPRCGVPDVFKFNSSKNLEDDLEMSSHYALFP 140

Query: 63  DNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADINISFQR 122
           +N +WP+ K +LTY F NN+P++FVP +T A+A WAA S FTFSEA + Q ADINISFQ 
Sbjct: 141 NNEKWPDYKRHLTYMFTNNFPIDFVPSMTEAMARWAAQSLFTFSEASDAQSADINISFQV 200

Query: 123 GEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELGHVLGL 182
            +H D   FDGPGG++ HAFAPTDGRLH DGD++W+AG+   ++ V   ALHELGHVLGL
Sbjct: 201 KDHADGFAFDGPGGVVGHAFAPTDGRLHLDGDDTWSAGLEEKKVNVMNAALHELGHVLGL 260

Query: 183 GHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALY 217
            HS++ QA++WPYIE  + K LNDDDIAG+ ALY
Sbjct: 261 AHSTLPQAVMWPYIESNALKNLNDDDIAGIHALY 294

[Close]
BLAST of Lsi02G015350 vs. NCBI nr
Match: gi|659117650|ref|XP_008458715.1| (PREDICTED: metalloendoproteinase 1-like [Cucumis melo])

HSP 1 Score: 261.5 bits (667), Expect = 1.3e-66
Identity = 122/219 (55.71%), Postives = 162/219 (73.97%), Query Frame = 1 

Query: 3   QSAIKSYQKRFNLNMSGILDKETLAQFSKPRCGVPDSF-NSNSNKNHEDD----LKMTSH 62
           +SA+K+YQ   NL  SGILD  TLAQ +KPRCGV D   N   N+N++++        SH
Sbjct: 97  ESALKTYQTNHNLAPSGILDSNTLAQIAKPRCGVQDVIKNKKRNQNYKNNGHIHFHKVSH 156

Query: 63  YTFFPDNLRWPNTKFNLTYTFINNYPLNFVPPVTRALAAWAANSQFTFSEAVEGQMADIN 122
           +TFF  NL+WP++KF+L+Y F+ NYP+  + PV+RA + W+ N+ F FS  V+ + ADI 
Sbjct: 157 FTFFEGNLKWPSSKFHLSYGFLPNYPIEAIKPVSRAFSKWSLNTHFKFSHVVDYRKADIK 216

Query: 123 ISFQRGEHGDENPFDGPGGILAHAFAPTDGRLHFDGDESWAAGVVANELIVETVALHELG 182
           ISF+RGEHGD  PFDG GG+LAHA+ PTDGRLHFDGDE+W+ G ++    VETVALHE+G
Sbjct: 217 ISFERGEHGDNAPFDGVGGVLAHAYPPTDGRLHFDGDEAWSVGAISGYFDVETVALHEIG 276

Query: 183 HVLGLGHSSIEQAILWPYIEPGSTKGLNDDDIAGLRALY 217
           H+LGL HS+IE+AI++P I  G TKGL+ DDIAG++ LY
Sbjct: 277 HILGLQHSTIEEAIMFPSIPEGVTKGLHGDDIAGIKTLY 315

The following BLAST results are available for this feature:
BLAST of Lsi02G015350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MEP1_SOYBN7.2e-4647.30Metalloendoproteinase 1 OS=Glycine max PE=1 SV=2[more]
5MMP_ARATH4.7e-4545.58Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana GN=5MMP PE=1 SV=1[more]
3MMP_ARATH1.7e-3937.97Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana GN=3MMP PE=1 SV=1[more]
2MMP_ARATH1.1e-3838.72Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana GN=2MMP PE=1 SV=1[more]
4MMP_ARATH8.0e-3738.94Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana GN=4MMP PE=1 SV=1[more]
BLAST of Lsi02G015350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNY8_CUCSA1.5e-7765.42Uncharacterized protein OS=Cucumis sativus GN=Csa_5G522910 PE=3 SV=1[more]
A0A0A0KVD8_CUCSA2.6e-7462.62Uncharacterized protein OS=Cucumis sativus GN=Csa_5G633150 PE=3 SV=1[more]
A0A0A0KX71_CUCSA4.4e-7461.68Uncharacterized protein OS=Cucumis sativus GN=Csa_5G631560 PE=3 SV=1[more]
Q9LEL9_CUCSA3.7e-6553.60Matrix metalloproteinase OS=Cucumis sativus GN=MMP-1 PE=2 SV=1[more]
A0A0A0KU02_CUCSA9.2e-6455.20Uncharacterized protein OS=Cucumis sativus GN=Csa_5G632080 PE=3 SV=1[more]
BLAST of Lsi02G015350 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G59970.12.6e-4645.58 Matrixin family protein[more]
AT1G24140.19.7e-4137.97 Matrixin family protein[more]
AT1G70170.16.3e-4038.72 matrix metalloproteinase[more]
AT2G45040.14.5e-3838.94 Matrixin family protein[more]
AT4G16640.11.7e-3739.38 Matrixin family protein[more]
BLAST of Lsi02G015350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778708586|ref|XP_004142843.2|2.1e-7765.42PREDICTED: metalloendoproteinase 1-like [Cucumis sativus][more]
gi|659118035|ref|XP_008458917.1|2.2e-7461.86PREDICTED: metalloendoproteinase 1-like [Cucumis melo][more]
gi|778708752|ref|XP_011656276.1|3.7e-7462.62PREDICTED: metalloendoproteinase 1-like [Cucumis sativus][more]
gi|778708729|ref|XP_004142460.2|6.3e-7461.68PREDICTED: metalloendoproteinase 1-like [Cucumis sativus][more]
gi|659117650|ref|XP_008458715.1|1.3e-6655.71PREDICTED: metalloendoproteinase 1-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
GO:0004222metalloendopeptidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0031012extracellular matrix
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR024079MetalloPept_cat_dom_sf
IPR021190Pept_M10A
IPR021158Pept_M10A_Zn_BS
IPR006026Peptidase_Metallo
IPR002477Peptidoglycan-bd-like
IPR001818Pept_M10_metallopeptidase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0031012 extracellular matrix
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008237 metallopeptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G015350.1Lsi02G015350.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001818Peptidase M10, metallopeptidasePFAMPF00413Peptidase_M10coord: 67..217
score: 1.2
IPR002477Peptidoglycan binding-likeGENE3DG3DSA:1.10.101.10coord: 2..30
score: 3.2
IPR002477Peptidoglycan binding-likePFAMPF01471PG_binding_1coord: 2..28
score: 6.
IPR002477Peptidoglycan binding-likeunknownSSF47090PGBD-likecoord: 2..39
score: 8.63
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 63..217
score: 2.2
IPR021158Peptidase M10A, cysteine switch, zinc binding sitePROSITEPS00546CYSTEINE_SWITCHcoord: 32..39
scor
IPR021190Peptidase M10APRINTSPR00138MATRIXINcoord: 204..217
score: 2.1E-35coord: 90..105
score: 2.1E-35coord: 29..42
score: 2.1E-35coord: 114..142
score: 2.1E-35coord: 171..196
score: 2.1
IPR024079Metallopeptidase, catalytic domainGENE3DG3DSA:3.40.390.10coord: 31..216
score: 1.9
NoneNo IPR availablePANTHERPTHR10201MATRIX METALLOPROTEINASEcoord: 3..216
score: 1.9
NoneNo IPR availablePANTHERPTHR10201:SF152SUBFAMILY NOT NAMEDcoord: 3..216
score: 1.9
NoneNo IPR availableunknownSSF55486Metalloproteases ("zincins"), catalytic domaincoord: 60..216
score: 2.08

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi02G015350CmaCh04G027300Cucurbita maxima (Rimu)cmalsiB651
Lsi02G015350MELO3C021509Melon (DHL92) v3.5.1lsimeB162
Lsi02G015350ClCG09G018620Watermelon (Charleston Gray)lsiwcgB155
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi02G015350Bottle gourd (USVL1VR-Ls)lsilsiB089
Lsi02G015350Cucumber (Gy14) v1cgylsiB118
Lsi02G015350Cucumber (Gy14) v1cgylsiB251
Lsi02G015350Cucurbita maxima (Rimu)cmalsiB272
Lsi02G015350Cucurbita maxima (Rimu)cmalsiB372
Lsi02G015350Cucurbita moschata (Rifu)cmolsiB261
Lsi02G015350Cucurbita moschata (Rifu)cmolsiB640
Lsi02G015350Cucurbita pepo (Zucchini)cpelsiB141
Lsi02G015350Cucurbita pepo (Zucchini)cpelsiB336
Lsi02G015350Wild cucumber (PI 183967)cpilsiB028
Lsi02G015350Wild cucumber (PI 183967)cpilsiB352
Lsi02G015350Cucumber (Chinese Long) v2culsiB028
Lsi02G015350Cucumber (Chinese Long) v2culsiB348
Lsi02G015350Melon (DHL92) v3.5.1lsimeB182
Lsi02G015350Watermelon (Charleston Gray)lsiwcgB176
Lsi02G015350Watermelon (97103) v1lsiwmB170
Lsi02G015350Cucumber (Gy14) v2cgyblsiB024
Lsi02G015350Cucumber (Gy14) v2cgyblsiB319
Lsi02G015350Melon (DHL92) v3.6.1lsimedB191
Lsi02G015350Melon (DHL92) v3.6.1lsimedB171
Lsi02G015350Silver-seed gourdcarlsiB232
Lsi02G015350Silver-seed gourdcarlsiB623
Lsi02G015350Cucumber (Chinese Long) v3cuclsiB028
Lsi02G015350Cucumber (Chinese Long) v3cuclsiB371
Lsi02G015350Watermelon (97103) v2lsiwmbB161
Lsi02G015350Watermelon (97103) v2lsiwmbB208
Lsi02G015350Wax gourdlsiwgoB207
Lsi02G015350Wax gourdlsiwgoB253