Lsi02G011730 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi02G011730
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr02 : 14442008 .. 14445220 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGATTCCTTTAGAACAAAGGTTCTTTTCTCCATTTTTGATGCCAATGTTATGTTTTTCTTGCCAAATAATATAGTGATTTTGGCTGGAGTCCGCAAGTTTTCACAATTCTTTATAAGTCATTCAATTTGTTAAATCAGAAGATGCAAATATGAATAGATACTGCTTTTTTTGTTGGTGTATACTTGGCTACATCATGGCTAAGAATTACTATTGCTTAAATTTGGTGAGAATTCATTAGAAATCGGTGTAAACCTGTTTTGGTCCTCAACTTTGATACTTGTTCCACTTTTATTTCTAATCGTTCAAATGTCATATTTTGGTCTCAAGATTATGCATAAAAGTTATTGGAAAAATTCAACATTTACCTTGAATTTGTTCTATCATTTTTTCTGATGGAAAATTCAGCACCTTATCTGAAAAAACATTTCCTTAATTTGTAAAAGTGAGCCAACTTTTACCTATACATCTACACATGTTTCTTATTTCTACACATCCTAATAGCGTTTAGATTTTCCCTCTCAAATTGATCATTTTGCTTAGACCTAGTTAATATAGCTGTTGTTATTCTAGCATAAGTTTTCCCACATTCCCACATTTTCTGTTCTCTATTGTCATATGTGCTGTACCATCTTGTTTGTTGTGATGTCTCTATTTCAAGGAAAGTAGTTGTTAGCAAATGTTACAAGTTTTCAAGCCTGATACATGCCTGACATTTTCTAAAACAACAAACTTTTATGTGGTTAAACATAAATGAAATTGAAGTTAAAATTACTCCTCAACTTGGGCTTTTTGTTTGACTGTTATTACATTATCTTAATACCTTAAGATGTTTATTCTCCCCTACTTAATTCAATAAACAAGTTTTGTAATGACGTCCTGAAGAATGTATGAATTCTTGTTTTCTTTTTTAGTTTTGGCGCTCACTTTCAAATTATTATTATATTTACCCTTTGTCACAAACTACGAATAGGGTTTCTTTTATTATTTTGCGGAGACCTATGTTTTTTTATGGTAACTTTTCACCTATTAATAAGAAACTCTACTTTGTCAGAGAAAAAAATTGGAAGCTAATTTGAATTAATCTATAGTAGATTATAATGTCATTGCCCCTTGCAATCATTCCACTTTGTATCATCAAAAGGCTGATTCATCTCACCCCATCAGGAACCAAGACACATCATTCTTTTAATGAAATAATTATGTGTTAGTAATAAATGGACTATTTATTCATAAGTAATTAAGTACTAGTTTCCTTTGCATTTTAAGCACACTTTGCTTTTAGATTCTTTTTCATATTATCTTGGTTAGCAAAAACTTCGTATGACACATGAGCTAGTATACTTTTACGAGTACAATATATTACTGACTCTGAGGGAATTTATATATATTACACTCTTCTTTCCTAAATTAACTACAGATCTATCATGATTGATGTGGTAGTTGATGATAACCATAAATTTATTATAAAATTTTATTTATAGACATATTGAACATTTGTAGGGGATGTGAGGGTTCATTTTTCTATTGTATTTCTTTATTCATTCATCTTTGATGCTAGTGTAGGTGAATTTTGTTATACAGCTACTTGTTGGAAGATAGTTTCTAGAAGTTATTCTCACTTCTTAGATATAAGTATTAGTCTATGGAAAAGCTTTTTAAAATAGAGAATGGGTTGGTTTTGTAATTTTATTGCTTTTCCACATTTTGCATTATATCCCAACTATATTGTATTATCTTTTGATAGACATTGATATAGACTATGTTGGCAAAGGCTAGTTGCAAGCTCAATTTATTTAGACTTGGTGACATAGAACTTCAAATTTTTGTTGATCTTATTGACCATGGTAACTTTTGAGGCTACTGTGATTTTGTCTCTCAGACTCACACCATAGTGCTTACAGTTGAACCTAGGGTACGGATTTGACATTACTGAATATTCATGTTCAGATGTATTCCCGTCTCAAATTCACTGCAACAAGTAAGGTAATTTGAACACATTGATAAGTTTAAGTTGCATGGTTTGATTGGTTAGTCGAATCGTTTGAGAGAAATACGTTAATTAAGTTAAAAATAAAGATGATTATGAAGGTTTAAATTGTTTTTCGTGCTTTATGGTTCAACGTTCATACTTTTAGTAGGTCGATATGTTATATTAGACTACCTTTTTTTCTACGATATTAGGTACTTGTATTGCAAATTTCAATGAATTAAACAGGCTCCCAACCTACGGAATGAAATTGTTTAAAATTTGTATTAAGAGTTCTTATTCTACCCCCAATGTTTAAATTATATAACAAATGTAGAGGTGAGTTGTGTCAATCTATAGTATATGTATACACATAGGGCTAATACATATTATGAACCCCCTGTTGTGTTCTGCATTGTTTTACGTTTTTCCAGATTTTCTCAATTTGTCAGCTTCATTTGTTATTTTGTTCACTCCATCTTTGTGAAGTGTGAGTATTTGCTTTATGTCATAGTTTTTATTTCTTCACCAATTTATTGGAGTTCGTAATTATCTTTTTCCCTTTATTTTCATTTTTTGAGTTTCCAGGTGTTTCCTAGCTATAAATTTGGGTTTAGGGTTTATAGTTAAGGGCCTCCATTACACAGCTTATTCCTAGTTTGTTTCGAGGTGGCTCATCGACATCAAAGGACCTATTCAAGAAGCTACGAAATTTCCCTTGCCTTGAGAAAATCAAATTCCTTCTTTGGGAATTGATCCACTCTTGCCTCAACACTTTGGATAGACTGAATTAATCTATCCCCATCTTGGTGCTGCCTCTGCTAGAATGACAAAGAATCTCAGAATCGTTTTTTTCCCGATTGTGTACCAATATCAAATAAAGGGTAAAAAGGGAAATTGTAGTGTGTTGTGGGGTCCATGACTAGGGAAATTGTGTGATTGTATTGTATGGACCAATGAGAGTGAGAGGGGAGATTCATAAGTTTGTTGCGTTGAGGGAAAGTTAGTTTTAGTTTTTGGCTAAAGAAAATCTTCTCGAGAGAGGGGATGGTGGAGTAGAGAGAACCGATTTCATAGATCAAATTCCCTCGATATTGTACTGTTTCTTTCAAATTCAATAAGAATCTCGATACTTTCATATTGGTATCAGAGCAATCAACCTGGACGACTGGGAAAAATGGCTCAGAAACGCTTGGATGAATGGATTGATGCGACTGACGGAGAAATTGCAGTAATATGA

mRNA sequence

ATGGGGGATGTGAGGGTTCATTTTTCTATTATGTATTCCCGTCTCAAATTCACTGCAACAAGTAAGGTGTTTCCTAGCTATAAATTTGGGTTTAGGAGCAATCAACCTGGACGACTGGGAAAAATGGCTCAGAAACGCTTGGATGAATGGATTGATGCGACTGACGGAGAAATTGCAGTAATATGA

Coding sequence (CDS)

ATGGGGGATGTGAGGGTTCATTTTTCTATTATGTATTCCCGTCTCAAATTCACTGCAACAAGTAAGGTGTTTCCTAGCTATAAATTTGGGTTTAGGAGCAATCAACCTGGACGACTGGGAAAAATGGCTCAGAAACGCTTGGATGAATGGATTGATGCGACTGACGGAGAAATTGCAGTAATATGA

Protein sequence

MGDVRVHFSIMYSRLKFTATSKVFPSYKFGFRSNQPGRLGKMAQKRLDEWIDATDGEIAVI
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G011730.1Lsi02G011730.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi02G011730Cucurbita pepo (Zucchini)cpelsiB010
Lsi02G011730Cucurbita pepo (Zucchini)cpelsiB059
Lsi02G011730Cucurbita pepo (Zucchini)cpelsiB425
Lsi02G011730Wild cucumber (PI 183967)cpilsiB033
Lsi02G011730Wild cucumber (PI 183967)cpilsiB038
Lsi02G011730Wild cucumber (PI 183967)cpilsiB448
Lsi02G011730Cucumber (Chinese Long) v2culsiB032
Lsi02G011730Cucumber (Chinese Long) v2culsiB037
Lsi02G011730Cucumber (Chinese Long) v2culsiB441
Lsi02G011730Melon (DHL92) v3.5.1lsimeB176
Lsi02G011730Melon (DHL92) v3.5.1lsimeB231
Lsi02G011730Watermelon (Charleston Gray)lsiwcgB178
Lsi02G011730Watermelon (Charleston Gray)lsiwcgB169
Lsi02G011730Watermelon (97103) v1lsiwmB208
Lsi02G011730Watermelon (97103) v1lsiwmB205
Lsi02G011730Cucumber (Gy14) v2cgyblsiB029
Lsi02G011730Cucumber (Gy14) v2cgyblsiB038
Lsi02G011730Melon (DHL92) v3.6.1lsimedB184
Lsi02G011730Melon (DHL92) v3.6.1lsimedB186
Lsi02G011730Melon (DHL92) v3.6.1lsimedB192
Lsi02G011730Silver-seed gourdcarlsiB045
Lsi02G011730Silver-seed gourdcarlsiB449
Lsi02G011730Cucumber (Chinese Long) v3cuclsiB033
Lsi02G011730Cucumber (Chinese Long) v3cuclsiB044
Lsi02G011730Watermelon (97103) v2lsiwmbB153
Lsi02G011730Wax gourdlsiwgoB251
Lsi02G011730Wax gourdlsiwgoB257
Lsi02G011730Bottle gourd (USVL1VR-Ls)lsilsiB065
Lsi02G011730Cucumber (Gy14) v1cgylsiB521
Lsi02G011730Cucurbita maxima (Rimu)cmalsiB204
Lsi02G011730Cucurbita maxima (Rimu)cmalsiB369
Lsi02G011730Cucurbita moschata (Rifu)cmolsiB194
Lsi02G011730Cucurbita moschata (Rifu)cmolsiB357