Lsi02G010690 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi02G010690
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCoffea canephora DH200=94 genomic scaffold, scaffold_1379
Locationchr02 : 11771718 .. 11778267 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTTCATCAATAAGACTTTGTTCCTTCAATTATAGCAGCAAGTTTAGAGGAGCTACTGCCAATCCCAGTTCCTGTCTACAAGAAGACAAGGGGATGTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTATTTGGTGGGTTCTGGTTTTCTTCTTTTTTCTCTCTTCTCCCTCGCTCCCTCTTCAAACCCCATTACGAACTGTTTCTTTGATGCTCTCTTTTTTTCATTTAGTATTTTTTTTCCTTTTGTTGACTCTGTGATTTGTTTGAGATTTTTCTAGACTCTATAACTAATTAAATAGCGTGATTCTTATTTATTTGGGTCTGTTATGATTCTTTTAAATAGTATTTTTTTTTCTTTTGGAGACTAAGAATGAAATATTCTAGGTATGAATCAAGTTACCAAAAGGCTAAATAATCAAAGGCTTAGGTTGCACACTTGCAAAGTATAGTTGAATCACAACAACCTACAATTGAAGAAATATTAAGAAGATTAACAAGTCAAGGAGGTTCATCTAGCACAGAAGAATCCAGAAGAGTCCAATAAAAGGTAGTATATATAAAACTTTCTTCTTAAAACTCTAATTTGTTATGAAGTATTGGATTGGATTAGAACTCCTGCAGTTACGGTAGTCATAGTTTAAAACTCTATTTACGTTGACTTGGTATCTCTGAATTACTTTGACTATCCTGCAGTTATGGTAGTCATAGATTAGTTACTGATATTTTATCCCATTTTCATGAATGTCCATTGGTTTTGTTACATAATGTGATGTGTTGGAAATTTTACCATTCCTTCCTTTATGTGTAGTGTGATCCTTGTTTAGATGTTTGTGTGTTTGATAGATTATGTTACAATGTAAGGAGTTGTTATTAGTCTTTTCTATTCATTTTGGTTTCTACTAAGTTATTTAGTTCATGAATTTCATTAACTTGTTGAGTTTATTTCTTGAATTGAGTTTGTGTTGATTCTTACTTGTTCAAAACTCTCTATTCTTGAGTTTGTTTCTGTTGAGTTTGTTCTATTAGTTGTTTCTCTTTCTTTTGACAATCTTTGTTGCTTGAGTTGATAAGTTAAAATTATGGTTTCTATTAAGTTCATGAGTTTTATTAACTTGTTAAGTTTATTTCTTGAGTTGAGTTTATGTTGAATCATTTATGAATGCTTGTGTTTTTATGTTTATGCATTTTGCCAAATGACAAAGTGTGTTTCAGGTGCCTTTGACCTAGAATTGCGTCATGTGCTTGAACTCGCCACAAATTTTAAATTAAAATTCGAAATTATATGAGCTTGAGTATATCCTTTTCGACCTCATGTTGTTTTGGCTTCAATTGTTGCATTGTTTAGAAGAATCTTAGCTAGAGACTTTTTGCTTTAATACAAAAAAATTATTAGTAATATGCCAAAGTATATTTGCTGGGATATGCAACTTTTTTTTTTTTTTAATTTTTATGAAGTGGTGAAGGGAACATGTTTTATCATGAAGTTTCTAGATACTTTTAGGAGGTTGATCTTGTATTGGTGACTTGTACTTACTTCAACCCTTTGATAAAATCGATTATAAACAGAGGCCAAATTAATTATGCCATGATTGAGGAAGACCTTGCAGAGAGAGATGATTTTATTTCAACGCCCGAGTCTCAATTCTTGTATCTAACAGCTGATGCTCGGTCAACATTAAGGTTTTGAAATTCCTGATTAAAATTTATGCTTAGTTCATAATTCTTAGTGTGTGAGGTCACAATTGAAATTTTATGTGTTACTGTAGTGTTATTGGGGTGTATTACTAGAAATGTTTGCACAAGTTTGCTACAGATCTTTGAAGTATGCTTGGATTTACAAGTAATTTTTTATTGAGTTGTTTATGGTTTTTCTATTAAGTTCATTTTAGTTTATGAGTTTCATTATCTAGTTGAGTTTATTTCTTTATATAAATTGAGTTGATTGTGTTTTTTTGTCTATAAACTCATTGGAAAACAACATAATTCTAGTTTGCTATGTTTGAGCATGATTTTCATATACTTCTAGTATACAGGTTTTGTTCAATTATTTATCCTAATGTGCTTACATATTTCACTTCTTTATTTGTCAGATATGATGTCTCGATGGTCTTCAATACAATATTTTAAAGTTGAATTTGGATGGAAATGGAAACAGTTTGGGAAGGTATTTTATACTTTTGTTTCAAAATGAAGTTTCATACTTCAAAGATCTGTAGGAATATTTGTTAGGCAAACTAGTGATACCTAGTGTTAGTACTAATTTTGTTCATCGTTTACTTGATGTAAACTTGATCATTATAACTTTGGTTGATAATTGATATTACTCGAACTCACTTATTACAAAATTATCAAAGTTTGTTGATATAATTTTCTCATGTAAACTTGTGGCCAAGTTGATATTATTTCACTTTGTTTGAATGATAATGTTGGAAATGTGTATCTTCACTTGTAATTTTTTGTTTAAATATAAATTGATTAGTTAACTCTTAATTTGTTCAAAAGATTAATATATTTTAAATTTTATTACAGGTTTATATATTAAATAAAAATATTATTTTTTAATATAAAATAATTTTACCGACGTTTTCTATCATGTCAGTAAATCCGATAACTTCAAATTTATAGTGGCAAATATATTAATTTTACCAACGTTTAAATGTGTTGCAAAAGATACTTGTAATGACCACAAATTTATATAAAACTTAACTTTCAGAGACGCATTTTTCAACGTCACTGTATAAACGAAATAGTGACAAATAATGTGTTGCTAAAAGTGCGCATTTAGTAACGCGTGCGTGTCAGTAAAAGTACACTTTTAGCGACAGAAAATAAACGCGTCACTAAAACCTTTAGCTACGCGGATACAGTGGCACTCCTAGTGACGCGGGCCTCCGCGTTGCTAATACTTTTAGTGGTGCTTTTTTACTTTTAGCAACGCATTTTATGCGCCACTGAAAGTGGTTTTTCTTGTAGTGAGATTTCAGTTCCATAGTTGCACCACTTAATGAACTTATAAAGAAAAATGTAAAGTTTGAGTGGGGACAAGCACAAGAATGCGCTTTCAATGATTTAAAAGCTAAGCTATGTAATGCGCCTTTACTTGTCTTACCTAATTTTGAACTAACATTTGAAATTGAGTGTGACGCCAGTGGAATAGGGATTGAAGCTGTGTTAATGCAGGATCAAAGACCATTGATGTACTTCAGTGAGAAACTGAATGGAGCTGCCTTGAAATATCCTACATATGACAAGGAGCTTTATGCCTTGGTGAGAGCACTACAAACATGGCAACATTATTTGTGGCCAAAGGAGTTTGTTATTCACACTGACCACCAAAGCTTACAACACTTGAAAGGCCAACACAAGCTGAATCGAAGACATGCGAAATGGTTAGAGTTCATTGAAACCTTTCCTTATGTGATAAGGTATAAAAAAAGGTAAGGAAAATGTAGTAGCAGATGCACTATCTTGGAGGTATGTTTTGCTAAACGCCCTTCACACTAGGTTGCTTGGGTTTGAACATATTAAGACATTGTATTCACAAGACACTTGTTTTGCACCTATTATTGAACATTTCAAGCAAAAACGTGTTGTGCCTGATTATATGTTGTTTGATGAGTTTTTATTTAGGAAAAATAAACTTTGCATTCCCACATGTTGTATTCATGAGTTACTAGTTAAGGAAGCACATGGGGGAGGATTAATGGGACATTTTGGGGTCACTAAGACATATGACATGTTGAGTGAACATTTTTATTGGCCTAGAATGAGACATGATGTACATAAGGAGTGTGAGAGATGTATTGCATGTAGGGAAGCTAAGTCTAAGTTGAAACCACATGGACTACATTTGCCTTTGCCAACCCCTAGGGACCATGGTTAGATATTTCAATGGATTTTGTGTTGGGTCTACCTAGATCTAAGAGAGGAAAGGATAGCATTTTTGTGGTAGTTGACAGGTTTAGCAAAATGGCTCATTTCATTGCATGTAATAAAACTAATGATGCTAAACATGTGGCTGACTTGTTCTTTAAGGATGTGGTTAAATTACATGGCATTCCTAGAAGCATTGTTAGTGATAGAGATGTGAAAATTTTAAGTCATTTTTGGAAGGTACTTTGGGGAAAGCTTGGTACTAAGTTAGTTTACTCCACTACATGTCATCCTCAGACTAATGGACAAACTGAGGTAGTCAATAGGACAATGGTGACTATGCTTAGGGCTATAATAGATAGAAACATCAAAACTTGGGAGGATTTTCTACCCTTTATTGAATTTGCATATAATAGGGCTGTTCATAGTGTCACTAAATGTACACCATTTGAGATTGTGTACGGATTTAACCCTTTATCACCTATTGATTTGTTGCCTTTGCCTTCTAATGAGGTTGTGAATTTTCAAGCTGATGAGAAGGCTACCGCTATTCGGGAGCTACATAAAGAGGTTAAAGAAAGGATTGAAAAGTAAAACGCCAAGGTAGCAGAAAGGGTTAACCAACATCGAAGGCCTATGATATTTAAGGAGGGAGATTGGGTTTGGGTCCACCTTCAGAAGGAAAGATTTCCACATCAACGAGATTCTAAGTTAAACCCAAAAGGAGATGGACCTTTTCAAGTGATGAAGAAAATCAATGACAATGCCTATCAGATTGATCTTGAAGGTAAATATGGGGTGAGTGCTACTTTTAATGTTTCTGACTTAACTCCTTTTGATGCAGATAATGAACTTGATTCGAGGAGGAATCCTTTAAAAGGGGGAGAAGATGATATGAACCAGGACGCCCTTGTGTTACCTTTAGGGCCAATCACACGCTCAAGAGCCAAGAAGCTACAGTTAGCGTTGAATTCTCACATTCAAGCGGAGGTGAACTTAATGGAGGGGATTCAAGCAACAACATTTGATCAAAAGCTTTATAATTGGTTTCAATTCATGCAACAAGATGAAACAGATTGACATCATTTTCTTTCCATGACTTCAAAATTGCTTTATAAGGCTTTGATTTGGATTCAAGGACGAATCCTTCAAAAGGAGTAGAGGATGATATGAACCGCCCAAGGCATCAAATTATTATTTAATAATGTTGATGTAATTTAATAAATTCTAATTTTATCTTTTTTTTTATAACATTTAAGTAAGGGTAATTTTATCTTTTTACTAAGTTGCATTAGGGTTTCTTTTATTGGGAGACTATTTAAAGTCTAGCCATTAAGTTGTTGGAACAGTTTTTGATGTTTACAGAACTTTAGAGTTTTCTTGAATGAGAATTCTCTGGTAGATGACAGAGTTTCATCCCGCCACTTTTGCAATTCTTGAACTAGGGTTGCATGCCAAGAACATTCAGGTAAGTTTGATCATCTTGCTTGTGGAGTGTTCGAACTTGGAGTAAGGAACTAGTTCTCCTTATCTCTTGGTCGATCAAAAGGTAATCCAATTCTAGTCTTTTCCTTTGGATTGACATCAATTGATTTAGGGGTTTTGGGATTTGTTGTTAGGGATTCAACAATTGGGTTCCTAATTTTTAAATTACTAGGGTTTTTATATCACCCTTGATCGTGAAATATTGATTGCTTTATTGAACCCTGTGAATTGCGTGAAAGTAGGATACTCTAAATTTGGGAGTAAGAGTTTTATAAAACGTTCTTGATGGAAAAAATGTGAATGAAAGATCCCACTTAATTGAATTGTGTCCATGAATCTAAGAAATAGTGAGAATTCTTGGTCTCTCTCAATTCAAAAATCCAGGATTTGAAATGATGTTCGTTTATCATCACGATAGATGTCAAGTGGAAGTGCAGTGATGTATGCAGTTGAGGCATCCTAACAGACCGGTAGACTTGAACCTTGTTCCTACATGACCCAATCAATTCGATTAGGCACTCGTCATCTATTTTCATTGTTCAACTCTTTGACAACACGAAAAAATCATTGTTCAACTCTTTGACAACATGAAAAAACCAAAAAAAACTCCGCCCTCCCTCTCTGTCTATCCAAGGGATGGAAGGGCAGAGGCCTTTGGTGTCCCCTCCAATCAAGAATTGGGGCCTCACAATCACTAGTCAATATGCTTTTCTCTCATGTCTTTCTTCGTTCATGGTTTGATATTCTAGTGTCCTAGACATAGAGGAACCACACCAATCCATCCCGAACTTGGTGGTTAAACTCTACTACGGTGACGATACTGTAGGGGAGGTCCTATGGAAAAATAGCTTGACGCCAGGATGATAAAAAGCTTAACACCTCTAATTCTTATTACTTTTCAATATTCAATATCATGTTGTCAAAGTCGGCCTTAGTAATCTGACGGTGCCGAGTGGAAGGGTCATCGCTTAATGGATAAAAGTTACTCTAGGGATAATAGTTTGATCTTCCCCAAGAGCTCACATCGACGAGAAGGTTTGGCACCTTGATGTCGGCTCTTCGCCACCTGGGGCTGTAGTATGTTCCAAGGGTTGGGTTGTTTGCCCATTAAAGCGGTACGTGAGTTGGGTTCAGAAAGTCGTGAGACAGTTCGGTCCATATCCGGTGTGGGCATTAGAGCATTGA

mRNA sequence

ATGATCAGCAAGTTTAGAGGAGCTACTGCCAATCCCAGTTCCTGTCTACAAGAAGACAAGGGGATGTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTATTTGGTGGGTTCTGGAGGTTGATCTTGTATTGGTGACTTGTACTTACTTCAACCCTTTGATAAAATCGATTATAAACAGAGGCCAAATTAATTATGCCATGATTGAGGAAGACCTTGCAGAGAGAGATGATTTTATTTCAACGCCCGAGTCTCAATTCTTGTATCTAACAGCTGATGCTCGGTCAACATTAAGAGCTCACATCGACGAGAAGGTTTGGCACCTTGATGTCGGCTCTTCGCCACCTGGGGCTGTAGTATGTTCCAAGGGTTGGGTTGTTTGCCCATTAAAGCGGTACGTGAGTTGGGTTCAGAAAGTCGTGAGACAGTTCGGTCCATATCCGGTGTGGGCATTAGAGCATTGA

Coding sequence (CDS)

ATGATCAGCAAGTTTAGAGGAGCTACTGCCAATCCCAGTTCCTGTCTACAAGAAGACAAGGGGATGTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTATTTGGTGGGTTCTGGAGGTTGATCTTGTATTGGTGACTTGTACTTACTTCAACCCTTTGATAAAATCGATTATAAACAGAGGCCAAATTAATTATGCCATGATTGAGGAAGACCTTGCAGAGAGAGATGATTTTATTTCAACGCCCGAGTCTCAATTCTTGTATCTAACAGCTGATGCTCGGTCAACATTAAGAGCTCACATCGACGAGAAGGTTTGGCACCTTGATGTCGGCTCTTCGCCACCTGGGGCTGTAGTATGTTCCAAGGGTTGGGTTGTTTGCCCATTAAAGCGGTACGTGAGTTGGGTTCAGAAAGTCGTGAGACAGTTCGGTCCATATCCGGTGTGGGCATTAGAGCATTGA

Protein sequence

MISKFRGATANPSSCLQEDKGMSQEGFLLNHARIWWVLEVDLVLVTCTYFNPLIKSIINRGQINYAMIEEDLAERDDFISTPESQFLYLTADARSTLRAHIDEKVWHLDVGSSPPGAVVCSKGWVVCPLKRYVSWVQKVVRQFGPYPVWALEH
Homology
[Close]
BLAST of Lsi02G010690 vs. TrEMBL
Match: A0A0K9G9G8_9BACI (RNAase OS=Bacillus sp. FJAT-27916 GN=AC622_03315 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-17
Identity = 43/55 (78.18%), Postives = 44/55 (80.00%), Query Frame = 1 

Query: 98  RAHIDEKVWHLDVGSSPPGAVVCSKGWVVCPLKRYVSWVQKVVRQFGPYPVWALE 153
           R HID +VWHLDVGSS PGAVV  KGW V PLKRY SWVQ VVRQFGPYP WA E
Sbjct: 57  RVHIDGEVWHLDVGSSHPGAVVGPKGWAVRPLKRYASWVQNVVRQFGPYPSWAQE 111

[Close]
BLAST of Lsi02G010690 vs. TrEMBL
Match: A0A0Q3QT81_9BACI (RNAase OS=Bacillus sp. FJAT-18043 GN=AN957_21720 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-17
Identity = 43/55 (78.18%), Postives = 44/55 (80.00%), Query Frame = 1 

Query: 98  RAHIDEKVWHLDVGSSPPGAVVCSKGWVVCPLKRYVSWVQKVVRQFGPYPVWALE 153
           R HID +VWHLDVGSS PGAVV  KGW V PLKRY SWVQ VVRQFGPYP WA E
Sbjct: 43  RVHIDGEVWHLDVGSSHPGAVVGPKGWAVRPLKRYASWVQNVVRQFGPYPSWAQE 97

[Close]
BLAST of Lsi02G010690 vs. TrEMBL
Match: A0A0K9GNK0_9BACI (RNAase OS=Bacillus sp. FJAT-27997 GN=AC625_00350 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-17
Identity = 43/55 (78.18%), Postives = 44/55 (80.00%), Query Frame = 1 

Query: 98  RAHIDEKVWHLDVGSSPPGAVVCSKGWVVCPLKRYVSWVQKVVRQFGPYPVWALE 153
           R HID +VWHLDVGSS PGAVV  KGW V PLKRY SWVQ VVRQFGPYP WA E
Sbjct: 43  RVHIDGEVWHLDVGSSHPGAVVGPKGWAVRPLKRYASWVQNVVRQFGPYPSWAQE 97

[Close]
BLAST of Lsi02G010690 vs. TrEMBL
Match: E5WT76_9BACI (Uncharacterized protein (Fragment) OS=Bacillus sp. 2_A_57_CT2 GN=HMPREF1013_05668 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-17
Identity = 43/55 (78.18%), Postives = 44/55 (80.00%), Query Frame = 1 

Query: 98  RAHIDEKVWHLDVGSSPPGAVVCSKGWVVCPLKRYVSWVQKVVRQFGPYPVWALE 153
           R HID +VWHLDVGSS PGAVV  KGW V PLKRY SWVQ VVRQFGPYP WA E
Sbjct: 9   RVHIDGEVWHLDVGSSHPGAVVGPKGWAVRPLKRYASWVQNVVRQFGPYPSWAQE 63

[Close]
BLAST of Lsi02G010690 vs. TrEMBL
Match: A0A0H2VIM3_STAES (Uncharacterized protein OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_2264 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 5.9e-17
Identity = 42/53 (79.25%), Postives = 43/53 (81.13%), Query Frame = 1 

Query: 98  RAHIDEKVWHLDVGSSPPGAVVCSKGWVVCPLKRYVSWVQKVVRQFGPYPVWA 151
           R HID +VWHLDVGSS PGAVV  KGW V PLKRY SWVQ VVRQFGPYP WA
Sbjct: 25  RVHIDGEVWHLDVGSSHPGAVVGPKGWAVRPLKRYASWVQNVVRQFGPYPSWA 77

[Close]
BLAST of Lsi02G010690 vs. TAIR10
Match: AT1G73470.3 (AT1G73470.3 unknown protein)

HSP 1 Score: 61.6 bits (148), Expect = 4.8e-10
Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = 1 

Query: 39  EVDLVLVTCTYFNPLIKSIINRGQINYAMIEEDLAERDDFISTPESQFLYLTADARSTLR 98
           E++ +L   +YF+PL+KSI N+G  +  MI +D+  RD FI   ES+FL+L ADARSTLR
Sbjct: 76  ELEKILFGPSYFSPLLKSIPNKGGGDRLMIGQDIEVRDGFIEALESRFLFLAADARSTLR 135

[Close]
BLAST of Lsi02G010690 vs. NCBI nr
Match: gi|635341514|emb|CDQ29749.1| (hypothetical protein BN981_04176 [Halobacillus trueperi])

HSP 1 Score: 99.4 bits (246), Expect = 5.9e-18
Identity = 44/55 (80.00%), Postives = 45/55 (81.82%), Query Frame = 1 

Query: 98  RAHIDEKVWHLDVGSSPPGAVVCSKGWVVCPLKRYVSWVQKVVRQFGPYPVWALE 153
           R HID +VWHLDVGSS PGAVV  KGW V PLKRY SWVQ VVRQFGPYP WALE
Sbjct: 102 RVHIDGEVWHLDVGSSHPGAVVGPKGWAVRPLKRYASWVQNVVRQFGPYPSWALE 156

[Close]
BLAST of Lsi02G010690 vs. NCBI nr
Match: gi|921278840|ref|WP_053216981.1| (RNAse [Virgibacillus sp. SK-1])

HSP 1 Score: 99.4 bits (246), Expect = 5.9e-18
Identity = 44/55 (80.00%), Postives = 45/55 (81.82%), Query Frame = 1 

Query: 98  RAHIDEKVWHLDVGSSPPGAVVCSKGWVVCPLKRYVSWVQKVVRQFGPYPVWALE 153
           R HID +VWHLDVGSS PGAVV  KGW V PLKRY SWVQ VVRQFGPYP WALE
Sbjct: 57  RVHIDGEVWHLDVGSSHPGAVVGPKGWAVRPLKRYASWVQNVVRQFGPYPSWALE 111

[Close]
BLAST of Lsi02G010690 vs. NCBI nr
Match: gi|913447280|ref|WP_050426689.1| (RNAse [Bacillus cereus])

HSP 1 Score: 97.1 bits (240), Expect = 2.9e-17
Identity = 43/55 (78.18%), Postives = 44/55 (80.00%), Query Frame = 1 

Query: 98  RAHIDEKVWHLDVGSSPPGAVVCSKGWVVCPLKRYVSWVQKVVRQFGPYPVWALE 153
           R HID +VWHLDVGSS PGAVV  KGW V PLKRY SWVQ VVRQFGPYP WA E
Sbjct: 25  RVHIDGEVWHLDVGSSHPGAVVGPKGWAVRPLKRYASWVQNVVRQFGPYPSWAQE 79

[Close]
BLAST of Lsi02G010690 vs. NCBI nr
Match: gi|317393397|gb|EFV74161.1| (hypothetical protein HMPREF1013_05668 [Bacillus sp. 2_A_57_CT2])

HSP 1 Score: 97.1 bits (240), Expect = 2.9e-17
Identity = 43/55 (78.18%), Postives = 44/55 (80.00%), Query Frame = 1 

Query: 98  RAHIDEKVWHLDVGSSPPGAVVCSKGWVVCPLKRYVSWVQKVVRQFGPYPVWALE 153
           R HID +VWHLDVGSS PGAVV  KGW V PLKRY SWVQ VVRQFGPYP WA E
Sbjct: 9   RVHIDGEVWHLDVGSSHPGAVVGPKGWAVRPLKRYASWVQNVVRQFGPYPSWAQE 63

[Close]
BLAST of Lsi02G010690 vs. NCBI nr
Match: gi|755001070|ref|WP_042354476.1| (RNAse [Bacillus rubiinfantis])

HSP 1 Score: 97.1 bits (240), Expect = 2.9e-17
Identity = 43/55 (78.18%), Postives = 44/55 (80.00%), Query Frame = 1 

Query: 98  RAHIDEKVWHLDVGSSPPGAVVCSKGWVVCPLKRYVSWVQKVVRQFGPYPVWALE 153
           R HID +VWHLDVGSS PGAVV  KGW V PLKRY SWVQ VVRQFGPYP WA E
Sbjct: 57  RVHIDGEVWHLDVGSSHPGAVVGPKGWAVRPLKRYASWVQNVVRQFGPYPSWAQE 111

The following BLAST results are available for this feature:
BLAST of Lsi02G010690 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi02G010690 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0K9G9G8_9BACI2.0e-1778.18RNAase OS=Bacillus sp. FJAT-27916 GN=AC622_03315 PE=4 SV=1[more]
A0A0Q3QT81_9BACI2.0e-1778.18RNAase OS=Bacillus sp. FJAT-18043 GN=AN957_21720 PE=4 SV=1[more]
A0A0K9GNK0_9BACI2.0e-1778.18RNAase OS=Bacillus sp. FJAT-27997 GN=AC625_00350 PE=4 SV=1[more]
E5WT76_9BACI2.0e-1778.18Uncharacterized protein (Fragment) OS=Bacillus sp. 2_A_57_CT2 GN=HMPREF1013_0566... [more]
A0A0H2VIM3_STAES5.9e-1779.25Uncharacterized protein OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_... [more]
BLAST of Lsi02G010690 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G73470.34.8e-1051.67 unknown protein[more]
BLAST of Lsi02G010690 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|635341514|emb|CDQ29749.1|5.9e-1880.00hypothetical protein BN981_04176 [Halobacillus trueperi][more]
gi|921278840|ref|WP_053216981.1|5.9e-1880.00RNAse [Virgibacillus sp. SK-1][more]
gi|913447280|ref|WP_050426689.1|2.9e-1778.18RNAse [Bacillus cereus][more]
gi|317393397|gb|EFV74161.1|2.9e-1778.18hypothetical protein HMPREF1013_05668 [Bacillus sp. 2_A_57_CT2][more]
gi|755001070|ref|WP_042354476.1|2.9e-1778.18RNAse [Bacillus rubiinfantis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G010690.1Lsi02G010690.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37203FAMILY NOT NAMEDcoord: 38..98
score: 5.8
NoneNo IPR availablePANTHERPTHR37203:SF2SUBFAMILY NOT NAMEDcoord: 38..98
score: 5.8

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi02G010690Cucumber (Chinese Long) v3cuclsiB034
Lsi02G010690Watermelon (97103) v2lsiwmbB153
Lsi02G010690Wax gourdlsiwgoB255
Lsi02G010690Cucumber (Gy14) v1cgylsiB539
Lsi02G010690Cucurbita maxima (Rimu)cmalsiB207
Lsi02G010690Cucurbita maxima (Rimu)cmalsiB369
Lsi02G010690Cucurbita moschata (Rifu)cmolsiB197
Lsi02G010690Cucurbita moschata (Rifu)cmolsiB356
Lsi02G010690Cucurbita pepo (Zucchini)cpelsiB417
Lsi02G010690Cucurbita pepo (Zucchini)cpelsiB449
Lsi02G010690Wild cucumber (PI 183967)cpilsiB034
Lsi02G010690Cucumber (Chinese Long) v2culsiB033
Lsi02G010690Melon (DHL92) v3.5.1lsimeB180
Lsi02G010690Watermelon (Charleston Gray)lsiwcgB169
Lsi02G010690Watermelon (97103) v1lsiwmB206
Lsi02G010690Cucumber (Gy14) v2cgyblsiB030
Lsi02G010690Melon (DHL92) v3.6.1lsimedB190
Lsi02G010690Silver-seed gourdcarlsiB102