Lsi02G010570 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G010570
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Protein NAP1
Location	chr02 : 11461118 .. 11467616 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGATCCATCTCTATCACCCACCAATACTAGAACAAGGGAGGATGACCAATCGAGATGGACCGAGTACTTGGGGCCAGATACGACTTCTCCAGTTGCAGCTCGGAGCACTAGGAATACTGCCCATGATGGCCAGAACCCCATTTCAGTTGGGTCTCTTAAGGGTTTGAATGTTCAGTGGGTGTACCAGCTTATTGAAGTTGCAGATGGTCTTATGGCTAAAATATATAGGCTGAACCAAATCTTAGACTATCCTGATCCAATTGCTCATGTATTTTCTGAAGCATTTTGGAAAGCAGGAGTTTTCCCTAACCATCCACGGATTTGCATATTGCTCTCTAAAAAATTCCCCGAACATTTTAGCAAATTACAACTTGAGCGTGTAAGATTTTATTTGTATTTGTCCTTTTCCCTTGGGCACATTTGTTTTGTATCGGTCATTTTTATTTGTACAGTACCAATTAACTTGAGACACTGTTGGAAAATATTGGCCCAGGTTGATAAAATTGCTCTAGATGCTATCAATGATAGTGCAGAACTTTATATTCAGAGTCTGGAACCGTGGGTTCAGGTAGGATTTGGTAGACCTTTAATCAGCTTTCATCTGATATTTGCACGTTCAAATGAGTATACTGGCAACTGTGTTTGTTTAGGTCAGAATCTAGATTTTTTTATCCAAGAAAAGTTACATTGTAGACTTCATACGAACTCTTTAGACTCTCAACACTCGTGACTTCACAATAAGTAACCACAATCTAAATAAGAGTTTGCAAGTTGGTTGCTATGCCATTTTAAATACTTACTTTCATTTTCTCAATTAGATTTCAAGCATATACTATAAATTGTAACTGTTTCCTTTTTCTTTAACAGCTGCTGCTTGATTTGATGGCATTTCGAGAACAGGCTCTGCGACTTATACTGGACATTAGTAGTACAGTCATAACTTTATTGGTGAGTCTTAAAAAGATAGTCATGTTAATATGTGAAAGATGTTAGCCTGCCAGAATGATATTTATATATATAAAGTTCGGTTGGTAATTTGTATTATTTTTGCGTTAAAAGGAATGACCTTGGAAACCAACACACGCATGTAGTTGAAGGCTCTTTTATATTTTCACCCTTGTTGAACATGCCAAAAAGAAGGGGAAAAGAAGAAAAAAGAAAAAACTCTGGGACCTAGTCCTAACCTTTCCCTTGGTAATTGAATTAGTTTTTTTTCCAGATCATCACAGACCAAATTATGAGATGGCTTTCTGAGTCTCCCGCTGTGCCCTCCTTAAGAAAGTTCCTCGTCACTTTTTTCTGTAATATAAGAAATAAACAAAATAGACTAAATTATGAAAAATACCCCGAAACTTTGCATTTAGGTTCAATGCCCCTGTTCTTTCAAAATTTGGAATTACTTTTGACCTTTCATAAAGGTTTTAAAATTTGTTAGAATGTTGGACAAACATTGGGACTTGGAACGAGAACTAGGACTTGGACACTGCCACACCGTTCCAAGTCACTGCCACACCTGCTCCAGGTTTCAATTTTTGTCCAACATTCTATTGGGTTTTTACTTTAAGGATAGTTTTGAAATGTTTATGAAAGGTCAAGGATAATATTGCACCTTTTGAAAGAGTAAGGATACTTTTTAAATAAATGTCAATGGCTTTGGCTTTTATCTTATCCATATTTGTTGATATCGCTGAATGAGCAAATAAAACTTGGTACCTGTAGTGTCGCCACTTTTTTATCATATTTTCCTGGTGTACTTATTGTTTAAACAACAGTGGCAACGATTCTGTATGTTATCTCTAATAACTTGTGACGGTATTTTGCAGCCCCATCAAAATTCAGTTATCCTGCATGCTTTTATGGATCTATTTTGTTCCTTCGTCCGTGTTAACTTGTTCGCTCACAAGGCAAGTAAACTACAAGATTTGCTGTTTTTAGTATTTTCCCTGTGTTTCAATTTCATTAAGCTAAGAGGTTATCAACTATACATGTTTGCCACACCCGTATTTTCATTGACATATTAATTTTCAATTTTACTGATAATTGTTTTGTGACAGTTGCCAAGGAAAATGATGCTTCAGATTTATAACCTCTTGCACGCCATGACAAGAAATGACCGTGACTGTGATTTTTATCATCGGTATGAGGCATAGTTACTTAAGTCCTACTTCAGCCTATCACTGTTTGTAATTCTAGGGATAAAAATTATGTTCTTTATTTAACTGTATAGTTTTTTTCATTTTTGGATGGAAAAAAAGTTAAATTTGTTTATAAGTTGAGGATTACCATGGCATTTAGCTGAAGGGTTATTTTTGGATTCAGCATAGCTTCAGTAACCAGTCATTTAGGCATTCGTTCTTAACTTCTTATTGTTAGCCATTTTCTTAGCCAAAATAATAATATATCACTTGATTGGTGATACTAAACTTATTTTCATCATGACGTCTGACTTTCATAGTTTCAAAGCAATTCTTCTACGCAGACTAACAAATTATTCATTTTTTTATTATTTAATTTAAGTTAATTTATTAATTATTTTTTATTTTATATTTTTTTTATGAGTTACAGGCTGGTTCAATTCATTGACTCATATGATCCACCTCTGAAAGGACTACAAGAGGATCTAAATTTTGTTAGCCCACGCATTGGAGAGGTTAGCCCCACTTTTATTTTAACGAAAGTAATTTACAGGTTAAATTGTAATTTTAAGTTTGGTCCATGTAACAATTGTGTTATAATGGGTCCTGGATTTGGAGTCTATTAGGTCCTTAATCTTTCACTGTCGTGTTTAATAGGTTGCTGAACTTATGATCCTTCAGGAATAGGTTGCTGAACTTTCTATTATGTATTTGATAGGTCTTTAAATTTTTGATTTTGTGTCTAATAGTTTCATGATTTATGAATTTTTTAAAAAAGTTTAGAGACTTTCAGACGCATAATTAAAAGTTAAGGGACTCATTAGATAGTTTTTAAAGTTTAGGAATCTATTAGATATAATATTAAAAGTTTAGGTATCTTTTTTCCTAATATTTGGATGGTCCAAGGTAACTTGCAGATGCCTTGACTAATCGTATGAGGCAACTACATGACCTTACTACATTTGGTTGCCAAGAGAATTTGTAGGGTATAAATCCTAGGTAGGTCTAGGTGGCCAAAATGAGTTCAACCCATCCCTTTACTATATATGTGGTTCTTTATTGATCACTAGGTTAACCCATAATAGTTAAAAGTTTTGGGACTTAATTAAGCAATTTTTAAAGTTTAGGGTCTTATTAAATACAATCATCAAAGTTGTGACCTGTGAGACCAAGCTTGTAAATTACCCAAAATTCTATATATAAAATCTGAGAAAGATGGAAATGGTGCAAACATATAGTAGACATCTTACCAAGCAAACTAAAGAAAGGAAAAATACTTTTTCTTAGTCAACAAAGTTTGAGAAATAGTTCCTTTGGTCCTCAAAGTTTTATAGTTTTAACTCTAGAAGATTTGAAAAGGATCGAAATGGTGTTATAAATTCTTGCAGCCAAGCTTTAGTAGTAGTCTCAATGTATCGAATAACAAGGAAAAAGAATATAGAAAAAAAAAAGATGTTTATCTGAATAGTTATTTTGTTCATTTTTCTTTTGAAAAGGAAACAAAGATTTTTCATTGATAGAGGCTAATGTTCCAAAATACAAAATTTTCAAGGAAATAAGAAAGGAAAAAAAAAAAAAGACTGTTATGGCTGAAGATGAATACAAGCTAAATAAGACAAAAAGCTGACAAGCTAAGAAACACCAAAAGCTTGGATAGAAAGCACCATGATGAATCTATGAGACAAACCAAACCAAAACGATCTGACCGACTAGTTTGTTCATTTACTATAACCCTATTCAATTTTCAAGACTGAAGCAAGTTTTCTCTGCTTTTCTTTTTAAGAAGATTACACTAAGTGATTTTTAGCTAAATTGTATACAGATAAATGTTCATGATTTATTTTCACTGAGTTTGTATCTTGCATCTTTTGGGAATAAGTATGACTGGTTTTGATGCTTTCTTCTTCTATGTTCATTTCAGTATTGAATAAAAAGTTTGTAACTTGTGAAGAGTTGTTAATTAAATCCTTAGTTTGCCATTTCAGGTCTTAGAGGCAGTGGGTCCTATTATTTTTCTGTCAACAGATACAAGAAAACTTAGAAATGAAGGATTTTTAAGTCCATACCACCCTCGATACCCAGACATACTTACGAACTCTGCTCATCCATTGGTAAACCTATCTTTGGATGATCTTTCTATTTCTAACTACTGCTAATTAGAAACCTCTTGAAGTAGTGTTTTGTTTCTTGTTTACTCATCTAATTTATTCCACCACTTCCTGTGCAGAGAGCACAAGATCTTGCAAATGTCACCTCCTATCGGGAGTGGGTATTGTTTGGGTATCTTGTTTGCCCTGATGAGCTGCTTCGTGTAACCAGCATTGACATTGCTCTGGTACTTGCCTCTATATTATGAGTCCTTTCCTTATTACTAAAGTTTTCATGTGAACTAAAAATATATTCATGTCCTACTCCTGTCTATCCTAGTTCATATTTTTGGTTCATGCATCATGTTGTACTAATTTGATGTCATCTCCAATTCCAATTGCTTATATTTGAGCAAATTTACTGTAACAAGTCTTTACAATTTTAGGCACTATGACGTAAAATCCTCCTTCCCAGTGACTTGGACCCTCTGTTCATGTCACTGGGTAAAAACTTTTATGGAGTAAATTATTTAATATTTCTTTTCACAAAAAGGAAGTTTCATGATCATGGAGATGTACGGGGACTCATTTCATAAAGGTACTGTGAACAGAACTATGAATGAGACCATTACTTGTATTTCAAAGAAAGCTAATTCTCTAGAAGTCCTTAGGTAGATATCTATTTTTTTTTTTTTAAAAGGAAAAAAGAAACAAGAGCTTTTAATTGATACATAAATTAGTATCACAATTTGAGTCCATATGATCGTTGTCGAAGTCTTGGTACAGAGCTCAAAAGTGTGCTGTTTCCACATCTTCATATCTCAGGCTACTTTTACCATTATTGGACAAATTATTGACTCTATTTGTGGCCAAGAAAGCAGTTGATGGGTGGTGATGGAATCTTGGAAAAACAAAGTAAGAGGTAATCTTCCAATTAGTCCACATAAAGGCCACAATAATGAGGTAGGTTCGGAGTTTTGGATTCTTTGGAAATGGTGGATGTGGTTGTATTTCTAGTCAGATTGTTTGGCTGTCATTTGATGGGAAACCAAAAGGAGCTCTTTCCTTACAGGGATCTCTCAAAAAGGAAAATTTATTGTATGAGGCCGCTAATGTGGCTGCCTCATAATAACGGTTGGATATGGATTCAAAAATCTGCATGTCCCTAATCATTACTTGATATAGCCATCCACCTCCTAAAGACAATCTTTCTAGTTATGATTCTGATGGAGATTCAATTGTTAGTGTAAGCACTGAGGATATTATGGACTCTCTAGCACAATGTGATTTCGTTGAGGAGACTTTAGAGGTTTACATTGCAGATAGTTTTGATACCTTATTTCAAAACGGTGAAAATGTTCAGGTAGAGAAGTCACCCATAAAGTTTCAATCAATTCCACCTCGTTCTCCTTTAGTTAAAGTTTAGCTTGGTGGTTTAGTCTAGGAATTAAACTATTATTGTGGAATTCTCGTGTTTTTGTGACTAAGCTTTACTGTTTTGCCATTAAAAAGTTGCGTTTTTTTCCCAGTAGTTGCAAGATTGGAAGCAACTGTTTAGAAGTTGGTTTGCTTTGTGGTTTGATCCTCTCACTTTTGGTCTTAAAGGACTTATTTCCTCGTTTGCTTAATGGTCTTTAGTTGGCATTGGCTTTACCGTTTATGTGTTCTCTAGCTCTAGTTTCTTTCATGGAGTTTGTTTGTTAAAGTTTTAAGTGTTTGTTTTTTTATGTCTTCCCTTCTCTTCTTTTGTTTTGTTTTGTTTTTATTTTTGTTTTTGTTTTTGTTTCTTTATTTTTTTTTTCAGTTTCTCTCTTCATTTGAAGGTTAACGTTAGTCTCTTTTCATTTTTCCAATGAAAAGTTCTCTTTCCCTTAAAAAAAAAATACTCGATATTATTTTGAGGTACTTTTATAGTTTCTTTCTCATACATCCAATAATGCAGAACTGCCAGCCACATTGTGGCCTCCTCAAATAATTTTTCCTAGAAAAGGGATTCACTTTTGCTAGACCTTGGCAAAAGAAAGCAAATGAAATGAAGATCAAACTTTGTGCTGTGATTCAGAAGTTGGAATTTCTTATCTTGATGGCATCCTATTCCTTGCTTTGTATGTAATAGTGGAAAAACCTTAGCATTCTGGTGGAGTTTATCAACCTGTGGAAAGATATCTGTTTCCTGATTATTCTGACATATTGTTGTGTCTCAAATATTTCAGTACCTTGTTTGTTGGCTTCTTGGTATTAGCTACTTGGAGAGGTTTTCGCCATCTTCGTATTA

mRNA sequence

CATGATCCATCTCTATCACCCACCAATACTAGAACAAGGGAGGATGACCAATCGAGATGGACCGAGTACTTGGGGCCAGATACGACTTCTCCAGTTGCAGCTCGGAGCACTAGGAATACTGCCCATGATGGCCAGAACCCCATTTCAGTTGGGTCTCTTAAGGGTTTGAATGTTCAGTGGGTGTACCAGCTTATTGAAGTTGCAGATGGTCTTATGGCTAAAATATATAGGCTGAACCAAATCTTAGACTATCCTGATCCAATTGCTCATCTGCTGCTTGATTTGATGGCATTTCGAGAACAGGCTCTGCGACTTATACTGGACATTAGTAGTACAGTCATAACTTTATTGTTGCCAAGGAAAATGATGCTTCAGATTTATAACCTCTTGCACGCCATGACAAGAAATGACCGTGACTGTGATTTTTATCATCGGCTGGTTCAATTCATTGACTCATATGATCCACCTCTGAAAGGACTACAAGAGGATCTAAATTTTGTTAGCCCACGCATTGGAGAGGTCTTAGAGGCAGTGGGTCCTATTATTTTTCTGTCAACAGATACAAGAAAACTTAGAAATGAAGGATTTTTAAGTCCATACCACCCTCGATACCCAGACATACTTACGAACTCTGCTCATCCATTGAGAGCACAAGATCTTGCAAATGTCACCTCCTATCGGGAGTGGGTATTGTTTGGGTATCTTGTTTGCCCTGATGAGCTGCTTCGTGTAACCAGCATTGACATTGCTCTGCTACTTGGAGAGGTTTTCGCCATCTTCGTATTA

Coding sequence (CDS)

CATGATCCATCTCTATCACCCACCAATACTAGAACAAGGGAGGATGACCAATCGAGATGGACCGAGTACTTGGGGCCAGATACGACTTCTCCAGTTGCAGCTCGGAGCACTAGGAATACTGCCCATGATGGCCAGAACCCCATTTCAGTTGGGTCTCTTAAGGGTTTGAATGTTCAGTGGGTGTACCAGCTTATTGAAGTTGCAGATGGTCTTATGGCTAAAATATATAGGCTGAACCAAATCTTAGACTATCCTGATCCAATTGCTCATCTGCTGCTTGATTTGATGGCATTTCGAGAACAGGCTCTGCGACTTATACTGGACATTAGTAGTACAGTCATAACTTTATTGTTGCCAAGGAAAATGATGCTTCAGATTTATAACCTCTTGCACGCCATGACAAGAAATGACCGTGACTGTGATTTTTATCATCGGCTGGTTCAATTCATTGACTCATATGATCCACCTCTGAAAGGACTACAAGAGGATCTAAATTTTGTTAGCCCACGCATTGGAGAGGTCTTAGAGGCAGTGGGTCCTATTATTTTTCTGTCAACAGATACAAGAAAACTTAGAAATGAAGGATTTTTAAGTCCATACCACCCTCGATACCCAGACATACTTACGAACTCTGCTCATCCATTGAGAGCACAAGATCTTGCAAATGTCACCTCCTATCGGGAGTGGGTATTGTTTGGGTATCTTGTTTGCCCTGATGAGCTGCTTCGTGTAACCAGCATTGACATTGCTCTGCTACTTGGAGAGGTTTTCGCCATCTTCGTATTA

Protein sequence

HDPSLSPTNTRTREDDQSRWTEYLGPDTTSPVAARSTRNTAHDGQNPISVGSLKGLNVQWVYQLIEVADGLMAKIYRLNQILDYPDPIAHLLLDLMAFREQALRLILDISSTVITLLLPRKMMLQIYNLLHAMTRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAVGPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNSAHPLRAQDLANVTSYREWVLFGYLVCPDELLRVTSIDIALLLGEVFAIFVL

Homology

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BLAST of Lsi02G010570 vs. Swiss-Prot
Match: NCKP1_ARATH (Protein NAP1 OS=Arabidopsis thaliana GN=NAP1 PE=1 SV=2)

HSP 1 Score: 283.9 bits (725), Expect = 1.8e-75
Identity = 145/195 (74.36%), Postives = 158/195 (81.03%), Query Frame = 1


Query: 86  DPIAHLLLDLMAFREQALRLILDIS-----------STVITLLL---------------- 145
           +P   LLLDLMAFREQALRLILD+S           S ++   +                
Sbjct: 155 EPWIQLLLDLMAFREQALRLILDLSSTVITLLPHQNSLILHAFMDLFCAFVRVNLFAEKI 214

Query: 146 PRKMMLQIYNLLHAMTRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV 205
           PRKM+LQ+YNLLHA++RNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV
Sbjct: 215 PRKMLLQVYNLLHALSRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV 274

Query: 206 GPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNSAHPLRAQDLANVTSYREWVLFGYLVCP 254
           GP IFLS DTRKLRNEGFLSPYHPR+PDILTNSAHP+RAQDLANVTSYREWVL GYLVCP
Sbjct: 275 GPSIFLSADTRKLRNEGFLSPYHPRFPDILTNSAHPMRAQDLANVTSYREWVLLGYLVCP 334

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BLAST of Lsi02G010570 vs. Swiss-Prot
Match: NCKP1_ORYSJ (Probable protein NAP1 OS=Oryza sativa subsp. japonica GN=NAP1 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 9.9e-74
Identity = 138/190 (72.63%), Postives = 155/190 (81.58%), Query Frame = 1


Query: 91  LLLDLMAFREQALRLILDISSTVITLL---------------------------LPRKMM 150
           LLLDL+ FREQALRLILD+SSTVITLL                           +PRKM+
Sbjct: 149 LLLDLLEFREQALRLILDLSSTVITLLPHQNSLILHAFMDLFCSFVRVNLFSDKIPRKMI 208

Query: 151 LQIYNLLHAMTRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAVGPIIF 210
           LQ+YN+LH M +  RDC+FYHRLVQF+D YDPP+KGL EDLNFVSPRIGEVLEAVGPIIF
Sbjct: 209 LQVYNILHIMLKGGRDCEFYHRLVQFVDLYDPPVKGLHEDLNFVSPRIGEVLEAVGPIIF 268

Query: 211 LSTDTRKLRNEGFLSPYHPRYPDILTNSAHPLRAQDLANVTSYREWVLFGYLVCPDELLR 254
           LSTDT+KLRNEGFLSP+HPRYPDILTNSAHP+RAQDLANVTSYREWVL GYLVCPDELLR
Sbjct: 269 LSTDTKKLRNEGFLSPFHPRYPDILTNSAHPMRAQDLANVTSYREWVLLGYLVCPDELLR 328

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BLAST of Lsi02G010570 vs. TrEMBL
Match: A0A0B2PKB8_GLYSO (Protein NAP1 OS=Glycine soja GN=glysoja_023663 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 3.1e-82
Identity = 152/168 (90.48%), Postives = 161/168 (95.83%), Query Frame = 1


Query: 86  DPIAHLLLDLMAFREQALRLILDISSTVITLLLPRKMMLQIYNLLHAMTRNDRDCDFYHR 145
           +P   LLLDLM FREQALRLILD+SSTVITLL+PRKM+LQ YN LHAM+RN+RDCDFYHR
Sbjct: 161 EPWVQLLLDLMVFREQALRLILDLSSTVITLLMPRKMLLQTYNFLHAMSRNERDCDFYHR 220

Query: 146 LVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAVGPIIFLSTDTRKLRNEGFLSPYHPRYP 205
           LVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAVGPIIFLSTDTRKLRNEGFLSPYHPRYP
Sbjct: 221 LVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAVGPIIFLSTDTRKLRNEGFLSPYHPRYP 280

Query: 206 DILTNSAHPLRAQDLANVTSYREWVLFGYLVCPDELLRVTSIDIALLL 254
           DILTNSAHPLRAQDLANVT+YREWVLFGYLVCPDEL RVTSIDIAL++
Sbjct: 281 DILTNSAHPLRAQDLANVTAYREWVLFGYLVCPDELRRVTSIDIALVV 328

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BLAST of Lsi02G010570 vs. TrEMBL
Match: A0A0A0M0S8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701890 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 3.4e-81
Identity = 160/195 (82.05%), Postives = 164/195 (84.10%), Query Frame = 1


Query: 86  DPIAHLLLDLMAFREQALRLILDISSTVITLL---------------------------L 145
           +P   LLLDLMAFREQALRLILDISSTVITLL                           L
Sbjct: 158 EPWVQLLLDLMAFREQALRLILDISSTVITLLPHQNSVILHAFMDLFCSFVRVNLFAHKL 217

Query: 146 PRKMMLQIYNLLHAMTRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV 205
           PRKMMLQIYNLLHAMTRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV
Sbjct: 218 PRKMMLQIYNLLHAMTRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV 277

Query: 206 GPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNSAHPLRAQDLANVTSYREWVLFGYLVCP 254
           GPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNSAHP+RAQDLANVTSYREWVL GYLVCP
Sbjct: 278 GPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNSAHPMRAQDLANVTSYREWVLLGYLVCP 337

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BLAST of Lsi02G010570 vs. TrEMBL
Match: M5WMI8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000289mg PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 2.9e-80
Identity = 155/179 (86.59%), Postives = 165/179 (92.18%), Query Frame = 1


Query: 86  DPIAHLLLDLMAFREQALRLILDISSTVITLLLPRKMMLQIYNLLHAMTRNDRDCDFYHR 145
           +P   LLLDLMAFREQALRLI D+SST     +PRKMMLQ+YNLLH+M+RNDRDCDFYHR
Sbjct: 159 EPWIQLLLDLMAFREQALRLIWDLSST-----MPRKMMLQMYNLLHSMSRNDRDCDFYHR 218

Query: 146 LVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAVGPIIFLSTDTRKLRNEGFLSPYHPRYP 205
           LVQFIDSYDPPLKGL+EDLNFVSPRIGEVLEAVGPIIFLSTDTRKLRNEGFLSPYHPRYP
Sbjct: 219 LVQFIDSYDPPLKGLKEDLNFVSPRIGEVLEAVGPIIFLSTDTRKLRNEGFLSPYHPRYP 278

Query: 206 DILTNSAHPLRAQDLANVTSYREWVLFGYLVCPDELLRVTSIDIAL--LLGEVFAIFVL 263
           DILTNSAHPLRAQDLANVTSYREWVLFGYLVCPDELLRVTSIDIAL  LL E + ++VL
Sbjct: 279 DILTNSAHPLRAQDLANVTSYREWVLFGYLVCPDELLRVTSIDIALYILLHEDYQLYVL 332

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BLAST of Lsi02G010570 vs. TrEMBL
Match: A0A067L412_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00095 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.1e-79
Identity = 155/195 (79.49%), Postives = 164/195 (84.10%), Query Frame = 1


Query: 86  DPIAHLLLDLMAFREQALRLILDISSTVITLL---------------------------L 145
           +P   LL+DLMAFREQALRLILD+SSTVITLL                           +
Sbjct: 160 EPWVQLLIDLMAFREQALRLILDLSSTVITLLPHQNSLILHAFMDLFCSFVRVNLFSEKI 219

Query: 146 PRKMMLQIYNLLHAMTRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV 205
           PRKMMLQ+YNLLHAM+RNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV
Sbjct: 220 PRKMMLQMYNLLHAMSRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV 279

Query: 206 GPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNSAHPLRAQDLANVTSYREWVLFGYLVCP 254
           GPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNSAHP+RAQDLANVTSYREWVL GYLVCP
Sbjct: 280 GPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNSAHPMRAQDLANVTSYREWVLLGYLVCP 339

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BLAST of Lsi02G010570 vs. TrEMBL
Match: A0A067GFD2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042513mg PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 4.2e-79
Identity = 154/188 (81.91%), Postives = 163/188 (86.70%), Query Frame = 1


Query: 86  DPIAHLLLDLMAFREQALRLILDISSTVITLL--------------------LPRKMMLQ 145
           +P   LLLDLMAFREQALRLILD+SSTVITLL                    +PRKMMLQ
Sbjct: 159 EPWVQLLLDLMAFREQALRLILDLSSTVITLLPHQNSLILHAFMDLFCSFVRMPRKMMLQ 218

Query: 146 IYNLLHAMTRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAVGPIIFLS 205
           +YNLLHAM+RNDRD D+YHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAVGPIIFLS
Sbjct: 219 MYNLLHAMSRNDRDFDYYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAVGPIIFLS 278

Query: 206 TDTRKLRNEGFLSPYHPRYPDILTNSAHPLRAQDLANVTSYREWVLFGYLVCPDELLRVT 254
           TDTRKLRNEGFLSPYHPRYPDILTNSAHP+RAQDLANVTSYREWVL GYLVCPDELLRVT
Sbjct: 279 TDTRKLRNEGFLSPYHPRYPDILTNSAHPMRAQDLANVTSYREWVLLGYLVCPDELLRVT 338

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BLAST of Lsi02G010570 vs. TAIR10
Match: AT2G35110.1 (AT2G35110.1 transcription activators)

HSP 1 Score: 283.9 bits (725), Expect = 1.0e-76
Identity = 145/195 (74.36%), Postives = 158/195 (81.03%), Query Frame = 1


Query: 86  DPIAHLLLDLMAFREQALRLILDIS-----------STVITLLL---------------- 145
           +P   LLLDLMAFREQALRLILD+S           S ++   +                
Sbjct: 155 EPWIQLLLDLMAFREQALRLILDLSSTVITLLPHQNSLILHAFMDLFCAFVRVNLFAEKI 214

Query: 146 PRKMMLQIYNLLHAMTRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV 205
           PRKM+LQ+YNLLHA++RNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV
Sbjct: 215 PRKMLLQVYNLLHALSRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV 274

Query: 206 GPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNSAHPLRAQDLANVTSYREWVLFGYLVCP 254
           GP IFLS DTRKLRNEGFLSPYHPR+PDILTNSAHP+RAQDLANVTSYREWVL GYLVCP
Sbjct: 275 GPSIFLSADTRKLRNEGFLSPYHPRFPDILTNSAHPMRAQDLANVTSYREWVLLGYLVCP 334

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BLAST of Lsi02G010570 vs. NCBI nr
Match: gi|734335935|gb|KHN08053.1| (Protein NAP1 [Glycine soja])

HSP 1 Score: 313.2 bits (801), Expect = 4.4e-82
Identity = 152/168 (90.48%), Postives = 161/168 (95.83%), Query Frame = 1


Query: 86  DPIAHLLLDLMAFREQALRLILDISSTVITLLLPRKMMLQIYNLLHAMTRNDRDCDFYHR 145
           +P   LLLDLM FREQALRLILD+SSTVITLL+PRKM+LQ YN LHAM+RN+RDCDFYHR
Sbjct: 161 EPWVQLLLDLMVFREQALRLILDLSSTVITLLMPRKMLLQTYNFLHAMSRNERDCDFYHR 220

Query: 146 LVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAVGPIIFLSTDTRKLRNEGFLSPYHPRYP 205
           LVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAVGPIIFLSTDTRKLRNEGFLSPYHPRYP
Sbjct: 221 LVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAVGPIIFLSTDTRKLRNEGFLSPYHPRYP 280

Query: 206 DILTNSAHPLRAQDLANVTSYREWVLFGYLVCPDELLRVTSIDIALLL 254
           DILTNSAHPLRAQDLANVT+YREWVLFGYLVCPDEL RVTSIDIAL++
Sbjct: 281 DILTNSAHPLRAQDLANVTAYREWVLFGYLVCPDELRRVTSIDIALVV 328

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BLAST of Lsi02G010570 vs. NCBI nr
Match: gi|449455389|ref|XP_004145435.1| (PREDICTED: protein NAP1 isoform X1 [Cucumis sativus])

HSP 1 Score: 309.7 bits (792), Expect = 4.9e-81
Identity = 160/195 (82.05%), Postives = 164/195 (84.10%), Query Frame = 1


Query: 86  DPIAHLLLDLMAFREQALRLILDISSTVITLL---------------------------L 145
           +P   LLLDLMAFREQALRLILDISSTVITLL                           L
Sbjct: 158 EPWVQLLLDLMAFREQALRLILDISSTVITLLPHQNSVILHAFMDLFCSFVRVNLFAHKL 217

Query: 146 PRKMMLQIYNLLHAMTRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV 205
           PRKMMLQIYNLLHAMTRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV
Sbjct: 218 PRKMMLQIYNLLHAMTRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV 277

Query: 206 GPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNSAHPLRAQDLANVTSYREWVLFGYLVCP 254
           GPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNSAHP+RAQDLANVTSYREWVL GYLVCP
Sbjct: 278 GPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNSAHPMRAQDLANVTSYREWVLLGYLVCP 337

[Close]

BLAST of Lsi02G010570 vs. NCBI nr
Match: gi|659118249|ref|XP_008459022.1| (PREDICTED: protein NAP1 isoform X3 [Cucumis melo])

HSP 1 Score: 309.7 bits (792), Expect = 4.9e-81
Identity = 160/195 (82.05%), Postives = 164/195 (84.10%), Query Frame = 1


Query: 86  DPIAHLLLDLMAFREQALRLILDISSTVITLL---------------------------L 145
           +P   LLLDLMAFREQALRLILDISSTVITLL                           L
Sbjct: 158 EPWVQLLLDLMAFREQALRLILDISSTVITLLPHQNSVILHAFMDLFCSFVRVNLFAHKL 217

Query: 146 PRKMMLQIYNLLHAMTRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV 205
           PRKMMLQIYNLLHAMTRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV
Sbjct: 218 PRKMMLQIYNLLHAMTRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV 277

Query: 206 GPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNSAHPLRAQDLANVTSYREWVLFGYLVCP 254
           GPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNSAHP+RAQDLANVTSYREWVL GYLVCP
Sbjct: 278 GPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNSAHPMRAQDLANVTSYREWVLLGYLVCP 337

[Close]

BLAST of Lsi02G010570 vs. NCBI nr
Match: gi|659118245|ref|XP_008459020.1| (PREDICTED: protein NAP1 isoform X1 [Cucumis melo])

HSP 1 Score: 309.7 bits (792), Expect = 4.9e-81
Identity = 160/195 (82.05%), Postives = 164/195 (84.10%), Query Frame = 1


Query: 86  DPIAHLLLDLMAFREQALRLILDISSTVITLL---------------------------L 145
           +P   LLLDLMAFREQALRLILDISSTVITLL                           L
Sbjct: 158 EPWVQLLLDLMAFREQALRLILDISSTVITLLPHQNSVILHAFMDLFCSFVRVNLFAHKL 217

Query: 146 PRKMMLQIYNLLHAMTRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV 205
           PRKMMLQIYNLLHAMTRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV
Sbjct: 218 PRKMMLQIYNLLHAMTRNDRDCDFYHRLVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAV 277

Query: 206 GPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNSAHPLRAQDLANVTSYREWVLFGYLVCP 254
           GPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNSAHP+RAQDLANVTSYREWVL GYLVCP
Sbjct: 278 GPIIFLSTDTRKLRNEGFLSPYHPRYPDILTNSAHPMRAQDLANVTSYREWVLLGYLVCP 337

[Close]

BLAST of Lsi02G010570 vs. NCBI nr
Match: gi|595895729|ref|XP_007213730.1| (hypothetical protein PRUPE_ppa000289mg [Prunus persica])

HSP 1 Score: 306.6 bits (784), Expect = 4.2e-80
Identity = 155/179 (86.59%), Postives = 165/179 (92.18%), Query Frame = 1


Query: 86  DPIAHLLLDLMAFREQALRLILDISSTVITLLLPRKMMLQIYNLLHAMTRNDRDCDFYHR 145
           +P   LLLDLMAFREQALRLI D+SST     +PRKMMLQ+YNLLH+M+RNDRDCDFYHR
Sbjct: 159 EPWIQLLLDLMAFREQALRLIWDLSST-----MPRKMMLQMYNLLHSMSRNDRDCDFYHR 218

Query: 146 LVQFIDSYDPPLKGLQEDLNFVSPRIGEVLEAVGPIIFLSTDTRKLRNEGFLSPYHPRYP 205
           LVQFIDSYDPPLKGL+EDLNFVSPRIGEVLEAVGPIIFLSTDTRKLRNEGFLSPYHPRYP
Sbjct: 219 LVQFIDSYDPPLKGLKEDLNFVSPRIGEVLEAVGPIIFLSTDTRKLRNEGFLSPYHPRYP 278

Query: 206 DILTNSAHPLRAQDLANVTSYREWVLFGYLVCPDELLRVTSIDIAL--LLGEVFAIFVL 263
           DILTNSAHPLRAQDLANVTSYREWVLFGYLVCPDELLRVTSIDIAL  LL E + ++VL
Sbjct: 279 DILTNSAHPLRAQDLANVTSYREWVLFGYLVCPDELLRVTSIDIALYILLHEDYQLYVL 332

The following BLAST results are available for this feature:

BLAST of Lsi02G010570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NCKP1_ARATH	1.8e-75	74.36	Protein NAP1 OS=Arabidopsis thaliana GN=NAP1 PE=1 SV=2	[more]
NCKP1_ORYSJ	9.9e-74	72.63	Probable protein NAP1 OS=Oryza sativa subsp. japonica GN=NAP1 PE=2 SV=1	[more]

BLAST of Lsi02G010570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0B2PKB8_GLYSO	3.1e-82	90.48	Protein NAP1 OS=Glycine soja GN=glysoja_023663 PE=4 SV=1	[more]
A0A0A0M0S8_CUCSA	3.4e-81	82.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701890 PE=4 SV=1	[more]
M5WMI8_PRUPE	2.9e-80	86.59	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000289mg PE=4 SV=1	[more]
A0A067L412_JATCU	1.1e-79	79.49	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00095 PE=4 SV=1	[more]
A0A067GFD2_CITSI	4.2e-79	81.91	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042513mg PE=4 SV=1	[more]

BLAST of Lsi02G010570 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G35110.1	1.0e-76	74.36	transcription activators	[more]

BLAST of Lsi02G010570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|734335935\|gb\|KHN08053.1\|	4.4e-82	90.48	Protein NAP1 [Glycine soja]	[more]
gi\|449455389\|ref\|XP_004145435.1\|	4.9e-81	82.05	PREDICTED: protein NAP1 isoform X1 [Cucumis sativus]	[more]
gi\|659118249\|ref\|XP_008459022.1\|	4.9e-81	82.05	PREDICTED: protein NAP1 isoform X3 [Cucumis melo]	[more]
gi\|659118245\|ref\|XP_008459020.1\|	4.9e-81	82.05	PREDICTED: protein NAP1 isoform X1 [Cucumis melo]	[more]
gi\|595895729\|ref\|XP_007213730.1\|	4.2e-80	86.59	hypothetical protein PRUPE_ppa000289mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019137	Nck-associated_protein-1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0007015	actin filament organization
biological_process	GO:0009825	multidimensional cell growth
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0010090	trichome morphogenesis
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G010570.1	Lsi02G010570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019137	Nck-associated protein 1	PFAM	PF09735	Nckap1	coord: 119..251 score: 9.7
None	No IPR available	PANTHER	PTHR12093	FAMILY NOT NAMED	coord: 34..253 score: 2.9
None	No IPR available	PANTHER	PTHR12093:SF10	MEMBRANE-ASSOCIATED PROTEIN HEM	coord: 34..253 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi02G010570	Csa1G701890	Cucumber (Chinese Long) v2	culsiB033
Lsi02G010570	CSPI01G34370	Wild cucumber (PI 183967)	cpilsiB034
Lsi02G010570	Cucsa.332770	Cucumber (Gy14) v1	cgylsiB539
Lsi02G010570	CmaCh13G004230	Cucurbita maxima (Rimu)	cmalsiB207
Lsi02G010570	CmoCh13G004530	Cucurbita moschata (Rifu)	cmolsiB197
Lsi02G010570	Cla004607	Watermelon (97103) v1	lsiwmB206
Lsi02G010570	MELO3C021739	Melon (DHL92) v3.5.1	lsimeB180
Lsi02G010570	ClCG01G009560	Watermelon (Charleston Gray)	lsiwcgB169
Lsi02G010570	MELO3C021737.2	Melon (DHL92) v3.6.1	lsimedB190
Lsi02G010570	Cla97C01G009780	Watermelon (97103) v2	lsiwmbB153
Lsi02G010570	Bhi08G000718	Wax gourd	lsiwgoB255
Lsi02G010570	Cp4.1LG20g06160	Cucurbita pepo (Zucchini)	cpelsiB417
Lsi02G010570	CsGy1G032840	Cucumber (Gy14) v2	cgyblsiB030
Lsi02G010570	Carg26138	Silver-seed gourd	carlsiB104
Lsi02G010570	CsaV3_1G046230	Cucumber (Chinese Long) v3	cuclsiB034

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G010570	Cucurbita maxima (Rimu)	cmalsiB369
Lsi02G010570	Cucurbita moschata (Rifu)	cmolsiB356
Lsi02G010570	Cucurbita pepo (Zucchini)	cpelsiB026