Lsi02G010420 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G010420
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Phloem protein 2
Location	chr02 : 11081190 .. 11083103 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCATCCCTAAAGAGAGAGAGTTAAAGAGCTAAGTTTGGGCATACTAATTTTTCTTCTTAATTAGTTGAATGGCTAACTTTTCAAAACCCCATTATGAAGCTGATCCAAGGGCCATAGAAACTATCAAGGTATTCAAACTAACTATATAATTTCATCTCTTAAATGCCTTTTTCCAATTTTGTCTTTTAATTTAAGATGTACTTACATACTTTTTTAAGGTACTGTAATAAGTAGCAATTTTAGGAATAATTATCAAGTGTATAGCAACATTTTAAAAAAATTTCAAATATAGCAAAGTCTATCAGTGATAGACTTTTATCGCTAATAGACTTTTTGATAGACCACCTAGACCATAAACGTCTATTAACGATAGAAGTCTATCACTAATAGACTTTGCAATATTTGAAATGTTTTTAAAATGTTGTTATATATACTAATATTTTGAATCTAATTACAATATTTGCAATTGTTCCACATGGTACTTAATTTTGAAAATTTTCTATTGAGCTATACTGAAGGTTGACTATTTTTTTAAAAACTAAAATTCATGTAGTACTTAAAAAACATTGATCGACAAAATAGAGATGCAGTATTTATTTTAAATTAATTTAAATGTTTGAAGACTAAATAGACATCATGCGGAAAGTGGATTTTATTATTATTTGGATAGTGACAAATAAAATAGTACTAATGTCCATATATATATATGATTGAAATTGTGTAGGGCAGCAGAACTGTATTTTATCCAAGAGCATTCAACATCACATGGGGTAATGACAACCGTTATTGGCGTTTTCCTCGTCAGAGCATTACTTTGTAAGTATACCTTTTGTTAAATCATTTGATCAATTCCAAACCATTAGCAGGTGGATTATATATGGTTAAGAAGTTTAAACACAAGATTTCTTGCTTTGAAACCATGTTAAATAACTAATTGACTCAAAAAACGTAATCATATTTTTACTTCTTTTTAAGGTTAAAATTCTATTTGAATACTCAAATTTTGAAGTAGATTACTTACTATATATATATATATATACCACTCAAGGTCATGGACAGCTACATGATACTTTTATTAGAAACATTATTAAAGAAAATTAAAAGGTAACCATGAAAATAAACTTTTATCTAACGCTTCTAAGATGAAAACAATATATATATATATATTTTTTTTTTTTTTTTTTGAAGTATAAGGATCAAAATACAACGAATGTTACCAATAAAAATAAGATCTAACCCTTTTTTAATTACACGAAGAAGTTCTCGAACATGTCTTAATGTTAAACAATATTTAATTAGATTATGAATATTTTATGAAAATTCTTACCAATATCATATACTATAACTTTTCATAGGAAGGACCCAAATTCAGTTGTGCAATTATTGCAAGTGAGTTGGCTAGAAGTGACTTGTTCAACAGACAATCTGGAGGCTGGCAAGACCTATAAAGTAGGGTTCAATGTATCACTTCAACCAGATGCATTTGGGTGGAATGAGCTTGAAGTTTTCATAATGGCCAAGGTTGGAAAAAAGGGAAACTACATTTTCAAGAAGACTAATCTCGGGAACAAACCCACAAACTCCACAAAGTTTAGTGTTCCTGAGGAGGGTTTGGAAATAGAAATTGTTGCACCACCAAGCTCCCCAGGAGATTGCAAGCTCTATTTTGGACTTTATGAAGTTTGGAGTGGCAAATGGAAGGGAGGCCTGCAGGTTCATAATGCTTTTGTTGAGAAAGTTTAGGGTTGAATTTGGCTTTTGTTAGAGTTATTATTATTGTATTATTACAAAATGGAAAATTTTAATTACCTTTTTAATCTTCGAATTAATTATGTTTTAAACAAATGGATTTGGATATTGAAAGTTTCAATTTTGGTCATTTTAGTCACTCAATTCTAAAAATAGTTTAAAC

mRNA sequence

TATCATCCCTAAAGAGAGAGAGTTAAAGAGCTAAGTTTGGGCATACTAATTTTTCTTCTTAATTAGTTGAATGGCTAACTTTTCAAAACCCCATTATGAAGCTGATCCAAGGGCCATAGAAACTATCAAGTACTTAAAAAACATTGATCGACAAAATAGAGATGCAGGCAGCAGAACTGTATTTTATCCAAGAGCATTCAACATCACATGGGGTAATGACAACCGTTATTGGCGTTTTCCTCGTCAGAGCATTACTTTGAAGGACCCAAATTCAGTTGTGCAATTATTGCAAGTGAGTTGGCTAGAAGTGACTTGTTCAACAGACAATCTGGAGGCTGGCAAGACCTATAAAGTAGGGTTCAATGTATCACTTCAACCAGATGCATTTGGGTGGAATGAGCTTGAAGTTTTCATAATGGCCAAGGTTGGAAAAAAGGGAAACTACATTTTCAAGAAGACTAATCTCGGGAACAAACCCACAAACTCCACAAAGTTTAGTGTTCCTGAGGAGGGTTTGGAAATAGAAATTGTTGCACCACCAAGCTCCCCAGGAGATTGCAAGCTCTATTTTGGACTTTATGAAGTTTGGAGTGGCAAATGGAAGGGAGGCCTGCAGGTTCATAATGCTTTTGTTGAGAAAGTTTAGGGTTGAATTTGGCTTTTGTTAGAGTTATTATTATTGTATTATTACAAAATGGAAAATTTTAATTACCTTTTTAATCTTCGAATTAATTATGTTTTAAACAAATGGATTTGGATATTGAAAGTTTCAATTTTGGTCATTTTAGTCACTCAATTCTAAAAATAGTTTAAAC

Coding sequence (CDS)

ATGGCTAACTTTTCAAAACCCCATTATGAAGCTGATCCAAGGGCCATAGAAACTATCAAGTACTTAAAAAACATTGATCGACAAAATAGAGATGCAGGCAGCAGAACTGTATTTTATCCAAGAGCATTCAACATCACATGGGGTAATGACAACCGTTATTGGCGTTTTCCTCGTCAGAGCATTACTTTGAAGGACCCAAATTCAGTTGTGCAATTATTGCAAGTGAGTTGGCTAGAAGTGACTTGTTCAACAGACAATCTGGAGGCTGGCAAGACCTATAAAGTAGGGTTCAATGTATCACTTCAACCAGATGCATTTGGGTGGAATGAGCTTGAAGTTTTCATAATGGCCAAGGTTGGAAAAAAGGGAAACTACATTTTCAAGAAGACTAATCTCGGGAACAAACCCACAAACTCCACAAAGTTTAGTGTTCCTGAGGAGGGTTTGGAAATAGAAATTGTTGCACCACCAAGCTCCCCAGGAGATTGCAAGCTCTATTTTGGACTTTATGAAGTTTGGAGTGGCAAATGGAAGGGAGGCCTGCAGGTTCATAATGCTTTTGTTGAGAAAGTTTAG

Protein sequence

MANFSKPHYEADPRAIETIKYLKNIDRQNRDAGSRTVFYPRAFNITWGNDNRYWRFPRQSITLKDPNSVVQLLQVSWLEVTCSTDNLEAGKTYKVGFNVSLQPDAFGWNELEVFIMAKVGKKGNYIFKKTNLGNKPTNSTKFSVPEEGLEIEIVAPPSSPGDCKLYFGLYEVWSGKWKGGLQVHNAFVEKV

Homology

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BLAST of Lsi02G010420 vs. Swiss-Prot
Match: P2A09_ARATH (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana GN=PP2A9 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.1e-34
Identity = 72/159 (45.28%), Postives = 98/159 (61.64%), Query Frame = 1


Query: 40  PRAFNITWGNDNRYWRFPRQSITLKDPNSVVQLLQVSWLEVTCSTDNLEAGKTYKVGFNV 99
           P   N  WG D+RYW  P      K+P    +L  VSWLEVT S D +E GKTY++GF +
Sbjct: 28  PSGLNFVWGGDSRYWVIP------KEPRMPAELKMVSWLEVTGSFDKIEPGKTYRIGFKI 87

Query: 100 SLQPDAFGWNELEVFIMAKVGKKGNYIFKK-----TNLGNKPTNSTKFSVPEE--GLEIE 159
           S +PDA GW++  VF+ AK+GKKG  ++K+      N G     S   ++P+E  GL   
Sbjct: 88  SFKPDATGWDKAPVFMSAKIGKKGKTVWKRIKSVSQNFGILKGGSEPVNIPDESDGLFEI 147

Query: 160 IVAPPSSPGDCKLYFGLYEVWSGKWKGGLQVHNAFVEKV 192
           +V+P +   D KL FGLYEVW+G+WK GL +H AFV++V
Sbjct: 148 LVSPTALNQDTKLQFGLYEVWTGRWKTGLLIHEAFVQEV 180

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BLAST of Lsi02G010420 vs. Swiss-Prot
Match: P2A01_ARATH (Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.0e-08
Identity = 48/167 (28.74%), Postives = 75/167 (44.91%), Query Frame = 1


Query: 19  IKYLKNIDRQNRDAGSRTVFYPRAFNITWGNDNRYWRFPRQSITLKDPNSVVQLLQVSWL 78
           IKY   +D +N +     + + +  +ITW +D  YW +  +  +  +    V L  V WL
Sbjct: 83  IKYW--VDERNSNC---FMLFAKNLSITWSDDVNYWTWFTEKESPNENVEAVGLKNVCWL 142

Query: 79  EVTCSTD--NLEAGKTYKVGFNVSLQPDAFGWNELEVFIMAKVGKKGNYIFKKTNLGNKP 138
           ++T   D  NL  G  Y+V F V L+  A+GW+      +     K     KK +L   P
Sbjct: 143 DITGKFDTRNLTPGIVYEVVFKVKLEDPAYGWDTPVNLKLVLPNGKEKPQEKKVSLRELP 202

Query: 139 TNSTKFSVPEEGLEIEIVAPPSSPGDCKLYFGLYEVWSGKWKGGLQV 184
               K+     G   E V   S+ G+  + F +YE  +G WK GL +
Sbjct: 203 --RYKWVDVRVG---EFVPEKSAAGE--ITFSMYEHAAGVWKKGLSL 237

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BLAST of Lsi02G010420 vs. TrEMBL
Match: A0A0A0M0V4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G703570 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.3e-74
Identity = 139/192 (72.40%), Postives = 154/192 (80.21%), Query Frame = 1


Query: 1   MANFSKPHYEADPRAIETIKYLKNIDRQNRDAGSRTVFYPRAFNITWGNDNRYWRFPRQS 60
           MA  SKPH +ADPRAIE  K            G + +FYPRA  ITWGNDNRYWRF   S
Sbjct: 1   MATVSKPHSDADPRAIEITK------------GGKMIFYPRALTITWGNDNRYWRF-LPS 60

Query: 61  ITLKDPNSVVQLLQVSWLEVTCSTDNLEAGKTYKVGFNVSLQPDAFGWNELEVFIMAKVG 120
             LKDP S VQLLQVSWLEVTCSTD +EAG+TYKVGFNVSLQPDAFGW+++EVFIMAKVG
Sbjct: 61  TNLKDPKSAVQLLQVSWLEVTCSTDKVEAGQTYKVGFNVSLQPDAFGWDDVEVFIMAKVG 120

Query: 121 KKGNYIFKKTNLGNK-PTNSTKFSVPEEGLEIEIVAPPSSPGDCKLYFGLYEVWSGKWKG 180
           KKG Y FKKT+ G +  T+S KFSVP+EGLEI+IVAP SSPGDC LYFGLYEVWSGKWKG
Sbjct: 121 KKGTYFFKKTSFGKRLGTSSKKFSVPDEGLEIKIVAPQSSPGDCSLYFGLYEVWSGKWKG 179

Query: 181 GLQVHNAFVEKV 192
           GLQ+H+AFVEKV
Sbjct: 181 GLQIHDAFVEKV 179

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BLAST of Lsi02G010420 vs. TrEMBL
Match: A0A0A0LYD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G703580 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 6.6e-58
Identity = 105/189 (55.56%), Postives = 136/189 (71.96%), Query Frame = 1


Query: 4   FSKPHYEADPRAIETIKYLKNIDRQNRDAGSRTVFYPRAFNITWGNDNRYWRFPRQSITL 63
           +S PH+  +P+AIE  K              + + YP+ F ITWGND RYWRFPRQS  L
Sbjct: 6   YSSPHFNGNPKAIEKAK------------NQKVIIYPKGFTITWGNDKRYWRFPRQSRNL 65

Query: 64  KDPNSVVQLLQVSWLEVTCSTDNLEAGKTYKVGFNVSLQPDAFGWNELEVFIMAKVGKKG 123
           K+ ++  +LLQVSWLEVTC TDN+E GK+YKVGFNVS+   AFGW   EV+IMAK+GK G
Sbjct: 66  KESSAAAELLQVSWLEVTCWTDNVEIGKSYKVGFNVSMTAAAFGWKGCEVYIMAKIGKAG 125

Query: 124 NYIFKKTNLGNKPTN-STKFSVPEEGLEIEIVAPPSSPGDCKLYFGLYEVWSGKWKGGLQ 183
            +++KK  L  K ++  TKF++PE+ L I +  P +SPGD +LYFG+YEVWSGKWKGGL+
Sbjct: 126 KFVYKKMCLDGKASDGQTKFNMPEDNLIITVKPPSTSPGDNRLYFGMYEVWSGKWKGGLK 182

Query: 184 VHNAFVEKV 192
           +H+AFVEKV
Sbjct: 186 IHHAFVEKV 182

[Close]

BLAST of Lsi02G010420 vs. TrEMBL
Match: A0A0A0LYR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G708660 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.5e-43
Identity = 88/189 (46.56%), Postives = 125/189 (66.14%), Query Frame = 1


Query: 7   PHYEADPRAIETIKYLKNIDRQNRDAGSRTVFYPRAFNITWGNDNRYWRFPRQSITLKDP 66
           PH EAD    +   ++K I          T  YP  FNITWGND+RYW   + ++    P
Sbjct: 6   PHREADEINGKEKNFIKGI----------TKVYPTGFNITWGNDDRYWNITKPNV----P 65

Query: 67  NS--VVQLLQVSWLEVTCSTDNLEAGKTYKVGFNVSLQPDAFGWNELEVFIMAKVGKKGN 126
            S  V +L QVSWLEVTCSTDN+E GK Y+VGFN++++PDAFGWN ++V++MAKVGKKG 
Sbjct: 66  GSLYVAELKQVSWLEVTCSTDNVEVGKYYRVGFNITMKPDAFGWNGIDVYVMAKVGKKGK 125

Query: 127 YIFKKTNLGNKPTNSTKFSVPEEGLEIEIVAPPSSPGDCK--LYFGLYEVWSGKWKGGLQ 186
           +   K +L     ++   ++P++ LEI +   P +P +C+  ++ GLYEVWS KWKGG+Q
Sbjct: 126 FTSMKVSLEEIKPDNIPITIPKKPLEIFV--NPVTPEECRSTIHLGLYEVWSSKWKGGMQ 178

Query: 187 VHNAFVEKV 192
           +H+AF+ +V
Sbjct: 186 IHDAFIHRV 178

[Close]

BLAST of Lsi02G010420 vs. TrEMBL
Match: D0R6I7_MALDO (Phloem protein 2 OS=Malus domestica GN=pp2-3 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.8e-40
Identity = 82/192 (42.71%), Postives = 122/192 (63.54%), Query Frame = 1


Query: 1   MANFSKPHYEADPRAIETIKYLKNIDRQNRDAGSRTVFYPRAFNITWGNDNRYWRFPRQS 60
           M+  +KPH++A+             D + +  G++ +F PR  NI WGND RYW+ P++ 
Sbjct: 1   MSMTTKPHFQAEQ------------DDEVKQEGNKYIFRPRGLNIVWGNDERYWKLPKKQ 60

Query: 61  ITLKDPNSVVQLLQVSWLEVTCSTDNLEAGKTYKVGFNVSLQPDAFGWNELEVFIMAKVG 120
            +  +P    +L+QVSWLEVT S  +L   K Y++ F+V L PDAFGW +++ F+MAKVG
Sbjct: 61  -SKDEPTEPAELIQVSWLEVTGSY-SLSTAKKYEISFDVELAPDAFGWRDIQAFLMAKVG 120

Query: 121 KKGNYIFKKTNLGNKPTNSTKFSVPEE-GLEIEIVAPPSSPGDCKLYFGLYEVWSGKWKG 180
           KKG Y + K  +  +     KF +P++ G  ++I  P ++P D  +YFGLYEVWSGKWKG
Sbjct: 121 KKGKYTWTKVKVAAQDPKVGKFKIPDDNGPPMKIEVPSNAP-DSTVYFGLYEVWSGKWKG 177

Query: 181 GLQVHNAFVEKV 192
           GL++H A V++V
Sbjct: 181 GLKIHQASVKEV 177

[Close]

BLAST of Lsi02G010420 vs. TrEMBL
Match: W9S3K5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018467 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 6.2e-40
Identity = 82/156 (52.56%), Postives = 110/156 (70.51%), Query Frame = 1


Query: 37  VFYPRAFNITWGNDNRYWRFPRQSITLKDPNSVVQLLQVSWLEVTCSTDNLEAGKTYKVG 96
           VFYPRA NI WG D RYWR P +  T ++     +L+QVSWLEVT +TD L   K+YK+ 
Sbjct: 22  VFYPRALNIVWGADTRYWRLPEKQ-TDREKTRPAELIQVSWLEVTGTTDPLNEEKSYKIS 81

Query: 97  FNVSLQPDAFGWNELEVFIMAKVGKKGNYIFKKTNLGNKPTNSTKFSVPEEGLEIEIVAP 156
           F +SL+PDAFGWN  ++++MAK+G++G Y + K    ++P N+  F+VP E   I++  P
Sbjct: 82  FELSLKPDAFGWNGCQLYLMAKLGRRGRYKWTKVTFKDQP-NNRPFTVPAEDFVIKV--P 141

Query: 157 PSSPG-DCKLYFGLYEVWSGKWKGGLQVHNAFVEKV 192
           PS+   D KLYFGLYEVWSGKWKGGL++H A V +V
Sbjct: 142 PSTDAEDRKLYFGLYEVWSGKWKGGLEIHKAEVAEV 173

[Close]

BLAST of Lsi02G010420 vs. TAIR10
Match: AT1G31200.1 (AT1G31200.1 phloem protein 2-A9)

HSP 1 Score: 147.9 bits (372), Expect = 6.4e-36
Identity = 72/159 (45.28%), Postives = 98/159 (61.64%), Query Frame = 1


Query: 40  PRAFNITWGNDNRYWRFPRQSITLKDPNSVVQLLQVSWLEVTCSTDNLEAGKTYKVGFNV 99
           P   N  WG D+RYW  P      K+P    +L  VSWLEVT S D +E GKTY++GF +
Sbjct: 28  PSGLNFVWGGDSRYWVIP------KEPRMPAELKMVSWLEVTGSFDKIEPGKTYRIGFKI 87

Query: 100 SLQPDAFGWNELEVFIMAKVGKKGNYIFKK-----TNLGNKPTNSTKFSVPEE--GLEIE 159
           S +PDA GW++  VF+ AK+GKKG  ++K+      N G     S   ++P+E  GL   
Sbjct: 88  SFKPDATGWDKAPVFMSAKIGKKGKTVWKRIKSVSQNFGILKGGSEPVNIPDESDGLFEI 147

Query: 160 IVAPPSSPGDCKLYFGLYEVWSGKWKGGLQVHNAFVEKV 192
           +V+P +   D KL FGLYEVW+G+WK GL +H AFV++V
Sbjct: 148 LVSPTALNQDTKLQFGLYEVWTGRWKTGLLIHEAFVQEV 180

[Close]

BLAST of Lsi02G010420 vs. TAIR10
Match: AT1G10155.1 (AT1G10155.1 phloem protein 2-A10)

HSP 1 Score: 138.3 bits (347), Expect = 5.0e-33
Identity = 73/186 (39.25%), Postives = 103/186 (55.38%), Query Frame = 1


Query: 14  RAIETIKYLKNIDRQNRDAGSRTVFYPRAFNITWGNDNRYWRFPRQSITLKDPNSVVQLL 73
           +A+++  Y    + +        VF P   N  WG D+RYW  P +  T        +L 
Sbjct: 5   KAVKSSHYEAESNMEQDIVRKAWVFKPSGLNFIWGGDSRYWVIPNEDRT------PAELK 64

Query: 74  QVSWLEVTCSTDNLEAGKTYKVGFNVSLQPDAFGWNELEVFIMAKVGKKGNYIFKKTNLG 133
           +VSWLEVT S D +E GKTY++GF +S   DA GW++  VF+ AK+GKKG  I+K+    
Sbjct: 65  KVSWLEVTGSYDKIEPGKTYRIGFKISFTADATGWDQAPVFMSAKIGKKGRTIWKRIKSV 124

Query: 134 NKPTNSTK-----FSVPEE---GLEIEIVAPPSSPGDCKLYFGLYEVWSGKWKGGLQVHN 192
           N   +  K      ++P+E     EI +    +   D KL FGLYEVW+GKWK GL ++ 
Sbjct: 125 NNNFDKLKGGTGPVNIPDETDGRFEIFVSPKVAINQDTKLQFGLYEVWTGKWKTGLLIYE 184

[Close]

BLAST of Lsi02G010420 vs. TAIR10
Match: AT4G19840.1 (AT4G19840.1 phloem protein 2-A1)

HSP 1 Score: 58.5 bits (140), Expect = 5.1e-09
Identity = 48/167 (28.74%), Postives = 75/167 (44.91%), Query Frame = 1


Query: 19  IKYLKNIDRQNRDAGSRTVFYPRAFNITWGNDNRYWRFPRQSITLKDPNSVVQLLQVSWL 78
           IKY   +D +N +     + + +  +ITW +D  YW +  +  +  +    V L  V WL
Sbjct: 83  IKYW--VDERNSNC---FMLFAKNLSITWSDDVNYWTWFTEKESPNENVEAVGLKNVCWL 142

Query: 79  EVTCSTD--NLEAGKTYKVGFNVSLQPDAFGWNELEVFIMAKVGKKGNYIFKKTNLGNKP 138
           ++T   D  NL  G  Y+V F V L+  A+GW+      +     K     KK +L   P
Sbjct: 143 DITGKFDTRNLTPGIVYEVVFKVKLEDPAYGWDTPVNLKLVLPNGKEKPQEKKVSLRELP 202

Query: 139 TNSTKFSVPEEGLEIEIVAPPSSPGDCKLYFGLYEVWSGKWKGGLQV 184
               K+     G   E V   S+ G+  + F +YE  +G WK GL +
Sbjct: 203 --RYKWVDVRVG---EFVPEKSAAGE--ITFSMYEHAAGVWKKGLSL 237

[Close]

BLAST of Lsi02G010420 vs. NCBI nr
Match: gi|778664566|ref|XP_011660312.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis sativus])

HSP 1 Score: 287.3 bits (734), Expect = 1.9e-74
Identity = 139/192 (72.40%), Postives = 154/192 (80.21%), Query Frame = 1


Query: 1   MANFSKPHYEADPRAIETIKYLKNIDRQNRDAGSRTVFYPRAFNITWGNDNRYWRFPRQS 60
           MA  SKPH +ADPRAIE  K            G + +FYPRA  ITWGNDNRYWRF   S
Sbjct: 1   MATVSKPHSDADPRAIEITK------------GGKMIFYPRALTITWGNDNRYWRF-LPS 60

Query: 61  ITLKDPNSVVQLLQVSWLEVTCSTDNLEAGKTYKVGFNVSLQPDAFGWNELEVFIMAKVG 120
             LKDP S VQLLQVSWLEVTCSTD +EAG+TYKVGFNVSLQPDAFGW+++EVFIMAKVG
Sbjct: 61  TNLKDPKSAVQLLQVSWLEVTCSTDKVEAGQTYKVGFNVSLQPDAFGWDDVEVFIMAKVG 120

Query: 121 KKGNYIFKKTNLGNK-PTNSTKFSVPEEGLEIEIVAPPSSPGDCKLYFGLYEVWSGKWKG 180
           KKG Y FKKT+ G +  T+S KFSVP+EGLEI+IVAP SSPGDC LYFGLYEVWSGKWKG
Sbjct: 121 KKGTYFFKKTSFGKRLGTSSKKFSVPDEGLEIKIVAPQSSPGDCSLYFGLYEVWSGKWKG 179

Query: 181 GLQVHNAFVEKV 192
           GLQ+H+AFVEKV
Sbjct: 181 GLQIHDAFVEKV 179

[Close]

BLAST of Lsi02G010420 vs. NCBI nr
Match: gi|659118304|ref|XP_008459052.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo])

HSP 1 Score: 233.8 bits (595), Expect = 2.5e-58
Identity = 106/189 (56.08%), Postives = 137/189 (72.49%), Query Frame = 1


Query: 4   FSKPHYEADPRAIETIKYLKNIDRQNRDAGSRTVFYPRAFNITWGNDNRYWRFPRQSITL 63
           +S PH+  DP+AIE  K              +T+ YP+ FNITWGND RYWR PRQS  L
Sbjct: 6   YSSPHFNGDPKAIEKAK------------NKKTIIYPKGFNITWGNDKRYWRLPRQSRNL 65

Query: 64  KDPNSVVQLLQVSWLEVTCSTDNLEAGKTYKVGFNVSLQPDAFGWNELEVFIMAKVGKKG 123
           K+ ++  +LLQVSWLEVTC TDN+E GK+YKVGFNVS+   AFGW   +V+IMAK+GK G
Sbjct: 66  KESSAAAELLQVSWLEVTCWTDNVEIGKSYKVGFNVSMTAAAFGWKGCDVYIMAKIGKAG 125

Query: 124 NYIFKKTNLGNKPT-NSTKFSVPEEGLEIEIVAPPSSPGDCKLYFGLYEVWSGKWKGGLQ 183
            +++KK  L +K + +  KF++PE+ L I +  P SSPGD +LYFG+YEVWSGKWKGGL+
Sbjct: 126 KFVYKKMCLDSKASDDQNKFNMPEDDLIITVKPPSSSPGDNRLYFGMYEVWSGKWKGGLK 182

Query: 184 VHNAFVEKV 192
           +H+AFVEKV
Sbjct: 186 IHHAFVEKV 182

[Close]

BLAST of Lsi02G010420 vs. NCBI nr
Match: gi|778664568|ref|XP_011660313.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis sativus])

HSP 1 Score: 231.9 bits (590), Expect = 9.5e-58
Identity = 105/189 (55.56%), Postives = 136/189 (71.96%), Query Frame = 1


Query: 4   FSKPHYEADPRAIETIKYLKNIDRQNRDAGSRTVFYPRAFNITWGNDNRYWRFPRQSITL 63
           +S PH+  +P+AIE  K              + + YP+ F ITWGND RYWRFPRQS  L
Sbjct: 6   YSSPHFNGNPKAIEKAK------------NQKVIIYPKGFTITWGNDKRYWRFPRQSRNL 65

Query: 64  KDPNSVVQLLQVSWLEVTCSTDNLEAGKTYKVGFNVSLQPDAFGWNELEVFIMAKVGKKG 123
           K+ ++  +LLQVSWLEVTC TDN+E GK+YKVGFNVS+   AFGW   EV+IMAK+GK G
Sbjct: 66  KESSAAAELLQVSWLEVTCWTDNVEIGKSYKVGFNVSMTAAAFGWKGCEVYIMAKIGKAG 125

Query: 124 NYIFKKTNLGNKPTN-STKFSVPEEGLEIEIVAPPSSPGDCKLYFGLYEVWSGKWKGGLQ 183
            +++KK  L  K ++  TKF++PE+ L I +  P +SPGD +LYFG+YEVWSGKWKGGL+
Sbjct: 126 KFVYKKMCLDGKASDGQTKFNMPEDNLIITVKPPSTSPGDNRLYFGMYEVWSGKWKGGLK 182

Query: 184 VHNAFVEKV 192
           +H+AFVEKV
Sbjct: 186 IHHAFVEKV 182

[Close]

BLAST of Lsi02G010420 vs. NCBI nr
Match: gi|659133769|ref|XP_008466892.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like, partial [Cucumis melo])

HSP 1 Score: 198.4 bits (503), Expect = 1.2e-47
Identity = 92/110 (83.64%), Postives = 102/110 (92.73%), Query Frame = 1


Query: 83  STDNLEAGKTYKVGFNVSLQPDAFGWNELEVFIMAKVGKKGNYIFKKTNLGNKPTNSTKF 142
           STD +EAGKTYKVGFNVSLQPDAFGW+++EVFIMAKVGKKGNY FKKTNLG + T++ KF
Sbjct: 1   STDKVEAGKTYKVGFNVSLQPDAFGWDDVEVFIMAKVGKKGNYFFKKTNLGKRSTSTKKF 60

Query: 143 SVPEEG-LEIEIVAPPSSPGDCKLYFGLYEVWSGKWKGGLQVHNAFVEKV 192
           SVP+EG LEIEIVAP SSPGDC LYFGLYEVWSGKWKGGLQ+H+AFVEKV
Sbjct: 61  SVPDEGNLEIEIVAPQSSPGDCGLYFGLYEVWSGKWKGGLQIHDAFVEKV 110

[Close]

BLAST of Lsi02G010420 vs. NCBI nr
Match: gi|659118310|ref|XP_008459054.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo])

HSP 1 Score: 191.8 bits (486), Expect = 1.1e-45
Identity = 95/188 (50.53%), Postives = 128/188 (68.09%), Query Frame = 1


Query: 7   PHYEADPRAIETIKYLKNIDRQNRDAGSRTVFYPRAFNITWGNDNRYWRFPRQSITLKDP 66
           PH EAD  A E     KN+ +        T  YPR FNITWGND+RYW     ++    P
Sbjct: 6   PHREADETAKE-----KNVIK------GITKVYPRGFNITWGNDDRYWNITNPNV----P 65

Query: 67  NSV--VQLLQVSWLEVTCSTDNLEAGKTYKVGFNVSLQPDAFGWNELEVFIMAKVGKKGN 126
            S+   +L QVSWLEVTCSTDN+E G+TY+VGFN++++PDAFGW+ ++V++MAKVGKKG 
Sbjct: 66  GSLYMAELKQVSWLEVTCSTDNVEVGETYRVGFNITMRPDAFGWDGIDVYVMAKVGKKGK 125

Query: 127 YIFKKTNLGNKPTNSTKFSVPEEGLEIEIVAPPSSPGDCK-LYFGLYEVWSGKWKGGLQV 186
           +   K +LG    N T  ++P+E LEI +    S+P +C+ ++ GLYEVWS KWKGGLQ+
Sbjct: 126 FTSMKVSLGEIGPNETPITIPKEPLEIFVA--HSTPKECRTIHLGLYEVWSSKWKGGLQI 176

Query: 187 HNAFVEKV 192
           H+AF+ KV
Sbjct: 186 HDAFIYKV 176

The following BLAST results are available for this feature:

BLAST of Lsi02G010420 vs. Swiss-Prot


Match Name	E-value	Identity	Description
P2A09_ARATH	1.1e-34	45.28	Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana GN=PP2A9 PE=2 SV=1	[more]
P2A01_ARATH	9.0e-08	28.74	Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1	[more]

BLAST of Lsi02G010420 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0V4_CUCSA	1.3e-74	72.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G703570 PE=4 SV=1	[more]
A0A0A0LYD1_CUCSA	6.6e-58	55.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G703580 PE=4 SV=1	[more]
A0A0A0LYR0_CUCSA	3.5e-43	46.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G708660 PE=4 SV=1	[more]
D0R6I7_MALDO	4.8e-40	42.71	Phloem protein 2 OS=Malus domestica GN=pp2-3 PE=2 SV=1	[more]
W9S3K5_9ROSA	6.2e-40	52.56	Uncharacterized protein OS=Morus notabilis GN=L484_018467 PE=4 SV=1	[more]

BLAST of Lsi02G010420 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31200.1	6.4e-36	45.28	phloem protein 2-A9	[more]
AT1G10155.1	5.0e-33	39.25	phloem protein 2-A10	[more]
AT4G19840.1	5.1e-09	28.74	phloem protein 2-A1	[more]

BLAST of Lsi02G010420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778664566\|ref\|XP_011660312.1\|	1.9e-74	72.40	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis sativus]	[more]
gi\|659118304\|ref\|XP_008459052.1\|	2.5e-58	56.08	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo]	[more]
gi\|778664568\|ref\|XP_011660313.1\|	9.5e-58	55.56	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis sativus]	[more]
gi\|659133769\|ref\|XP_008466892.1\|	1.2e-47	83.64	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like, partial [Cucumis melo]	[more]
gi\|659118310\|ref\|XP_008459054.1\|	1.1e-45	50.53	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025886	PP2-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G010420.1	Lsi02G010420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 37..186 score: 9.5
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 28..191 score: 9.4
None	No IPR available	PANTHER	PTHR32278:SF8	PHLOEM PROTEIN 2-A10-RELATED	coord: 28..191 score: 9.4

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G010420	Silver-seed gourd	carlsiB874
Lsi02G010420	Cucumber (Chinese Long) v3	cuclsiB034
Lsi02G010420	Watermelon (97103) v2	lsiwmbB153
Lsi02G010420	Wax gourd	lsiwgoB255
Lsi02G010420	Cucurbita maxima (Rimu)	cmalsiB207
Lsi02G010420	Cucurbita maxima (Rimu)	cmalsiB369
Lsi02G010420	Cucurbita moschata (Rifu)	cmolsiB197
Lsi02G010420	Cucurbita moschata (Rifu)	cmolsiB356
Lsi02G010420	Cucurbita pepo (Zucchini)	cpelsiB026
Lsi02G010420	Cucurbita pepo (Zucchini)	cpelsiB417
Lsi02G010420	Wild cucumber (PI 183967)	cpilsiB034
Lsi02G010420	Cucumber (Chinese Long) v2	culsiB033
Lsi02G010420	Melon (DHL92) v3.5.1	lsimeB180
Lsi02G010420	Watermelon (Charleston Gray)	lsiwcgB169
Lsi02G010420	Watermelon (Charleston Gray)	lsiwcgB177
Lsi02G010420	Watermelon (97103) v1	lsiwmB206
Lsi02G010420	Cucumber (Gy14) v2	cgyblsiB030
Lsi02G010420	Melon (DHL92) v3.6.1	lsimedB190