Lsi02G010410 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G010410
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Phloem protein 2
Location	chr02 : 11069046 .. 11070358 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATGTCTTTCTTTCTTTCTATATTTTTTTTCCCAATACTCTTCCTCTATGAACTCAAAAAAAAAAATATTAAAAAAAAAAAATACTCCTCCTTAGCTATATAAAGCTTCATCACACATCTCTTCTCTCACCATTATTTTCCCAAGAGAGAGCTATATTTGTTCATTCTAGCACAAAGATGGTTGGATTTTCCTATTCATCACCTCATTTCAATGGAGATCCAAAGGCAATAGAAAAGATCAAGGTATAAATTTGAAACCTCTTGACTATCTAAAGCCTCATTAAATAATTTCTTTCTACATACCAATCTTAGTATCTAACATTATTATTAATTAATTCAATATTTACAGAACCAAAAGACAATAATTTATCCCAATAGCTTCACCATCACATGGGGCAACGACAACCGCTATTGGCGCTTACCTCGTCAATCTCGTAGCTTGTAAGCCATTATATTCATTTCTCTTTCATCAAATACGTCAATATTTTTATTGAAATAGTAAAAATTCATTCATTCATTTTTCTTCTATATATCGATATTATCATCGACATGATTGAAATTTAAGATATCAACATAAAGGGTTATTATAAATAAAAGAGAAAAACTAAACTAACATCGATAATGAATTTTTTTTAACTTATTTTAAAATTTAAAAAAATGAAATAAATATTTATTTAATAATTTAAATATATCTTGTGATTTAAAGAAAAACATCTTTTAACTCTGATTTTTTTCTTATATTTTTATCTGAGAGATTAATAGGGAGTTTTGTTCAAAGAGTTGGAGAGTTGGAGAGAGCAAACTTGTGAACTCCTACTTATTGTTTGGCTCTAAGAATTCGTGGGTCGTGACTAAAAAACAATATTTTCGTTAACATAGATATTTAAAACCTTATTTCAATTAATTACTTTGTAGGAAGGAGGAGTCGAGTGCAGCAGCAGAGTTACTACAAGTGTCATGGTTGGAGGTGACATGTTCGACAGACAACGTGGAGGCTGGAAAAAGCTACAGAGTTGGGTTCAACCTATCCATGACGATGGCGGCTTTTGGATGGAAAGGATGTGAAGTTTACATAATGGCCAAGATTGGGAAGGCAGGAAAATTTGTGTACAAGAAGGTGTGTCTTGACGCTCGATGCTCTGATCAGAACAAGTTCAATATACCGGAGGATGATCTAATCATCACCGTGAAACCTCCTCCTAGCTCGCCGGGAGACAACCGTCTCTACTTTGGAATGTATGAGGTTTGGAGCGGAAGGTGGAAGGGAGGGCTCAAAATCCACCATGCATTTGTCGAGAAAGTTGAAAACTAG

mRNA sequence

CAATGTCTTTCTTTCTTTCTATATTTTTTTTCCCAATACTCTTCCTCTATGAACTCAAAAAAAAAAATATTAAAAAAAAAAAATACTCCTCCTTAGCTATATAAAGCTTCATCACACATCTCTTCTCTCACCATTATTTTCCCAAGAGAGAGCTATATTTGTTCATTCTAGCACAAAGATGGTTGGATTTTCCTATTCATCACCTCATTTCAATGGAGATCCAAAGGCAATAGAAAAGATCAAGAACCAAAAGACAATAATTTATCCCAATAGCTTCACCATCACATGGGGCAACGACAACCGCTATTGGCGCTTACCTCGTCAATCTCGTAGCTTTGCAGCAGCAGAGTTACTACAAGTGTCATGGTTGGAGGTGACATGTTCGACAGACAACGTGGAGGCTGGAAAAAGCTACAGAGTTGGGTTCAACCTATCCATGACGATGGCGGCTTTTGGATGGAAAGGATGTGAAGTTTACATAATGGCCAAGATTGGGAAGGCAGGAAAATTTGTGTACAAGAAGGTGTGTCTTGACGCTCGATGCTCTGATCAGAACAAGTTCAATATACCGGAGGATGATCTAATCATCACCGTGAAACCTCCTCCTAGCTCGCCGGGAGACAACCGTCTCTACTTTGGAATGTATGAGGTTTGGAGCGGAAGGTGGAAGGGAGGGCTCAAAATCCACCATGCATTTGTCGAGAAAGTTGAAAACTAG

Coding sequence (CDS)

ATGGTTGGATTTTCCTATTCATCACCTCATTTCAATGGAGATCCAAAGGCAATAGAAAAGATCAAGAACCAAAAGACAATAATTTATCCCAATAGCTTCACCATCACATGGGGCAACGACAACCGCTATTGGCGCTTACCTCGTCAATCTCGTAGCTTTGCAGCAGCAGAGTTACTACAAGTGTCATGGTTGGAGGTGACATGTTCGACAGACAACGTGGAGGCTGGAAAAAGCTACAGAGTTGGGTTCAACCTATCCATGACGATGGCGGCTTTTGGATGGAAAGGATGTGAAGTTTACATAATGGCCAAGATTGGGAAGGCAGGAAAATTTGTGTACAAGAAGGTGTGTCTTGACGCTCGATGCTCTGATCAGAACAAGTTCAATATACCGGAGGATGATCTAATCATCACCGTGAAACCTCCTCCTAGCTCGCCGGGAGACAACCGTCTCTACTTTGGAATGTATGAGGTTTGGAGCGGAAGGTGGAAGGGAGGGCTCAAAATCCACCATGCATTTGTCGAGAAAGTTGAAAACTAG

Protein sequence

MVGFSYSSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSRSFAAAELLQVSWLEVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDARCSDQNKFNIPEDDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVEN

Homology

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BLAST of Lsi02G010410 vs. Swiss-Prot
Match: P2A09_ARATH (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana GN=PP2A9 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.9e-32
Identity = 76/184 (41.30%), Postives = 101/184 (54.89%), Query Frame = 1


Query: 5   SYSSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSRSFAAAELLQVSWL 64
           S  S H   D K  +    +  I  P+     WG D+RYW +P++ R    AEL  VSWL
Sbjct: 3   SQKSSHHKADSKMEQDNNRKAWISQPSGLNFVWGGDSRYWVIPKEPRM--PAELKMVSWL 62

Query: 65  EVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDARCSD 124
           EVT S D +E GK+YR+GF +S    A GW    V++ AKIGK GK V+K++    +   
Sbjct: 63  EVTGSFDKIEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWKRI----KSVS 122

Query: 125 QN---------KFNIPE--DDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAF 178
           QN           NIP+  D L   +  P +   D +L FG+YEVW+GRWK GL IH AF
Sbjct: 123 QNFGILKGGSEPVNIPDESDGLFEILVSPTALNQDTKLQFGLYEVWTGRWKTGLLIHEAF 180

[Close]

BLAST of Lsi02G010410 vs. TrEMBL
Match: A0A0A0LYD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G703580 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 4.1e-86
Identity = 154/184 (83.70%), Postives = 163/184 (88.59%), Query Frame = 1


Query: 1   MVGFSYSSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSR----SFAAA 60
           MVGF YSSPHFNG+PKAIEK KNQK IIYP  FTITWGND RYWR PRQSR    S AAA
Sbjct: 1   MVGFFYSSPHFNGNPKAIEKAKNQKVIIYPKGFTITWGNDKRYWRFPRQSRNLKESSAAA 60

Query: 61  ELLQVSWLEVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKV 120
           ELLQVSWLEVTC TDNVE GKSY+VGFN+SMT AAFGWKGCEVYIMAKIGKAGKFVYKK+
Sbjct: 61  ELLQVSWLEVTCWTDNVEIGKSYKVGFNVSMTAAAFGWKGCEVYIMAKIGKAGKFVYKKM 120

Query: 121 CLDARCSD-QNKFNIPEDDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVE 180
           CLD + SD Q KFN+PED+LIITVKPP +SPGDNRLYFGMYEVWSG+WKGGLKIHHAFVE
Sbjct: 121 CLDGKASDGQTKFNMPEDNLIITVKPPSTSPGDNRLYFGMYEVWSGKWKGGLKIHHAFVE 180

[Close]

BLAST of Lsi02G010410 vs. TrEMBL
Match: A0A0A0M0V4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G703570 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.0e-52
Identity = 102/175 (58.29%), Postives = 126/175 (72.00%), Query Frame = 1


Query: 7   SSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWR-LPRQSRSF--AAAELLQVSW 66
           S PH + DP+AIE  K  K I YP + TITWGNDNRYWR LP  +     +A +LLQVSW
Sbjct: 5   SKPHSDADPRAIEITKGGKMIFYPRALTITWGNDNRYWRFLPSTNLKDPKSAVQLLQVSW 64

Query: 67  LEVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDARC- 126
           LEVTCSTD VEAG++Y+VGFN+S+   AFGW   EV+IMAK+GK G + +KK     R  
Sbjct: 65  LEVTCSTDKVEAGQTYKVGFNVSLQPDAFGWDDVEVFIMAKVGKKGTYFFKKTSFGKRLG 124

Query: 127 SDQNKFNIPEDDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV 178
           +   KF++P++ L I +  P SSPGD  LYFG+YEVWSG+WKGGL+IH AFVEKV
Sbjct: 125 TSSKKFSVPDEGLEIKIVAPQSSPGDCSLYFGLYEVWSGKWKGGLQIHDAFVEKV 179

[Close]

BLAST of Lsi02G010410 vs. TrEMBL
Match: A0A0A0LYR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G708660 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 6.9e-41
Identity = 82/154 (53.25%), Postives = 101/154 (65.58%), Query Frame = 1


Query: 26  TIIYPNSFTITWGNDNRYWRL--PRQSRSFAAAELLQVSWLEVTCSTDNVEAGKSYRVGF 85
           T +YP  F ITWGND+RYW +  P    S   AEL QVSWLEVTCSTDNVE GK YRVGF
Sbjct: 25  TKVYPTGFNITWGNDDRYWNITKPNVPGSLYVAELKQVSWLEVTCSTDNVEVGKYYRVGF 84

Query: 86  NLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDARCSDQNKFNIPEDDLIITVKPPP 145
           N++M   AFGW G +VY+MAK+GK GKF   KV L+    D     IP+  L I V P  
Sbjct: 85  NITMKPDAFGWNGIDVYVMAKVGKKGKFTSMKVSLEEIKPDNIPITIPKKPLEIFVNPVT 144

Query: 146 SSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV 178
                + ++ G+YEVWS +WKGG++IH AF+ +V
Sbjct: 145 PEECRSTIHLGLYEVWSSKWKGGMQIHDAFIHRV 178

[Close]

BLAST of Lsi02G010410 vs. TrEMBL
Match: A0A067JJY8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00140 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.2e-38
Identity = 88/170 (51.76%), Postives = 111/170 (65.29%), Query Frame = 1


Query: 7   SSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSRSFAAAELLQVSWLEV 66
           S PH   +  A+EK K  K I+ P +  I WGND RYW+L   SR  A+AELLQV WLEV
Sbjct: 3   SKPHREANLNAVEK-KENKWILGPPALNIVWGNDERYWKL---SRDQASAELLQVCWLEV 62

Query: 67  TCST-DNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDARCSD- 126
           T ST +N++ GKSY + F + M   AFGW GC V+IMAKIGK GK+ ++K+ L     D 
Sbjct: 63  TGSTSENLQKGKSYEIKFKVEMKEGAFGWNGCPVFIMAKIGKKGKYKWEKIDLINLAKDK 122

Query: 127 QNKFNIPEDDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFV 175
           + +F IP + L + V P   S  D +LYFG+YEVW+GRWKGGL IH A V
Sbjct: 123 KGQFEIPVNGLTVEV-PATYSGEDTKLYFGLYEVWTGRWKGGLVIHQAEV 167

[Close]

BLAST of Lsi02G010410 vs. TrEMBL
Match: W9S3K5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018467 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.8e-36
Identity = 74/158 (46.84%), Postives = 102/158 (64.56%), Query Frame = 1


Query: 23  NQKTIIYPNSFTITWGNDNRYWRLPRQS---RSFAAAELLQVSWLEVTCSTDNVEAGKSY 82
           N   + YP +  I WG D RYWRLP +         AEL+QVSWLEVT +TD +   KSY
Sbjct: 18  NGTIVFYPRALNIVWGADTRYWRLPEKQTDREKTRPAELIQVSWLEVTGTTDPLNEEKSY 77

Query: 83  RVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDARCSDQNKFNIPEDDLIITV 142
           ++ F LS+   AFGW GC++Y+MAK+G+ G++ + KV    +  +   F +P +D +I V
Sbjct: 78  KISFELSLKPDAFGWNGCQLYLMAKLGRRGRYKWTKVTFKDQ-PNNRPFTVPAEDFVIKV 137

Query: 143 KPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV 178
            PP +   D +LYFG+YEVWSG+WKGGL+IH A V +V
Sbjct: 138 -PPSTDAEDRKLYFGLYEVWSGKWKGGLEIHKAEVAEV 173

[Close]

BLAST of Lsi02G010410 vs. TAIR10
Match: AT1G31200.1 (AT1G31200.1 phloem protein 2-A9)

HSP 1 Score: 139.8 bits (351), Expect = 1.6e-33
Identity = 76/184 (41.30%), Postives = 101/184 (54.89%), Query Frame = 1


Query: 5   SYSSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSRSFAAAELLQVSWL 64
           S  S H   D K  +    +  I  P+     WG D+RYW +P++ R    AEL  VSWL
Sbjct: 3   SQKSSHHKADSKMEQDNNRKAWISQPSGLNFVWGGDSRYWVIPKEPRM--PAELKMVSWL 62

Query: 65  EVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDARCSD 124
           EVT S D +E GK+YR+GF +S    A GW    V++ AKIGK GK V+K++    +   
Sbjct: 63  EVTGSFDKIEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWKRI----KSVS 122

Query: 125 QN---------KFNIPE--DDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAF 178
           QN           NIP+  D L   +  P +   D +L FG+YEVW+GRWK GL IH AF
Sbjct: 123 QNFGILKGGSEPVNIPDESDGLFEILVSPTALNQDTKLQFGLYEVWTGRWKTGLLIHEAF 180

[Close]

BLAST of Lsi02G010410 vs. TAIR10
Match: AT1G10155.1 (AT1G10155.1 phloem protein 2-A10)

HSP 1 Score: 139.0 bits (349), Expect = 2.8e-33
Identity = 70/178 (39.33%), Postives = 101/178 (56.74%), Query Frame = 1


Query: 8   SPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSRSFAAAELLQVSWLEVT 67
           S H+  +    + I  +  +  P+     WG D+RYW +P + R+   AEL +VSWLEVT
Sbjct: 9   SSHYEAESNMEQDIVRKAWVFKPSGLNFIWGGDSRYWVIPNEDRT--PAELKKVSWLEVT 68

Query: 68  CSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKV-----CLDARC 127
            S D +E GK+YR+GF +S T  A GW    V++ AKIGK G+ ++K++       D   
Sbjct: 69  GSYDKIEPGKTYRIGFKISFTADATGWDQAPVFMSAKIGKKGRTIWKRIKSVNNNFDKLK 128

Query: 128 SDQNKFNIPEDD---LIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV 178
                 NIP++      I V P  +   D +L FG+YEVW+G+WK GL I+ AFVE+V
Sbjct: 129 GGTGPVNIPDETDGRFEIFVSPKVAINQDTKLQFGLYEVWTGKWKTGLLIYEAFVEEV 184

[Close]

BLAST of Lsi02G010410 vs. NCBI nr
Match: gi|659118304|ref|XP_008459052.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo])

HSP 1 Score: 332.0 bits (850), Expect = 6.3e-88
Identity = 157/184 (85.33%), Postives = 166/184 (90.22%), Query Frame = 1


Query: 1   MVGFSYSSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSR----SFAAA 60
           MVGF YSSPHFNGDPKAIEK KN+KTIIYP  F ITWGND RYWRLPRQSR    S AAA
Sbjct: 1   MVGFFYSSPHFNGDPKAIEKAKNKKTIIYPKGFNITWGNDKRYWRLPRQSRNLKESSAAA 60

Query: 61  ELLQVSWLEVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKV 120
           ELLQVSWLEVTC TDNVE GKSY+VGFN+SMT AAFGWKGC+VYIMAKIGKAGKFVYKK+
Sbjct: 61  ELLQVSWLEVTCWTDNVEIGKSYKVGFNVSMTAAAFGWKGCDVYIMAKIGKAGKFVYKKM 120

Query: 121 CLDARCS-DQNKFNIPEDDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVE 180
           CLD++ S DQNKFN+PEDDLIITVKPP SSPGDNRLYFGMYEVWSG+WKGGLKIHHAFVE
Sbjct: 121 CLDSKASDDQNKFNMPEDDLIITVKPPSSSPGDNRLYFGMYEVWSGKWKGGLKIHHAFVE 180

[Close]

BLAST of Lsi02G010410 vs. NCBI nr
Match: gi|778664568|ref|XP_011660313.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis sativus])

HSP 1 Score: 325.5 bits (833), Expect = 5.9e-86
Identity = 154/184 (83.70%), Postives = 163/184 (88.59%), Query Frame = 1


Query: 1   MVGFSYSSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWRLPRQSR----SFAAA 60
           MVGF YSSPHFNG+PKAIEK KNQK IIYP  FTITWGND RYWR PRQSR    S AAA
Sbjct: 1   MVGFFYSSPHFNGNPKAIEKAKNQKVIIYPKGFTITWGNDKRYWRFPRQSRNLKESSAAA 60

Query: 61  ELLQVSWLEVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKV 120
           ELLQVSWLEVTC TDNVE GKSY+VGFN+SMT AAFGWKGCEVYIMAKIGKAGKFVYKK+
Sbjct: 61  ELLQVSWLEVTCWTDNVEIGKSYKVGFNVSMTAAAFGWKGCEVYIMAKIGKAGKFVYKKM 120

Query: 121 CLDARCSD-QNKFNIPEDDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVE 180
           CLD + SD Q KFN+PED+LIITVKPP +SPGDNRLYFGMYEVWSG+WKGGLKIHHAFVE
Sbjct: 121 CLDGKASDGQTKFNMPEDNLIITVKPPSTSPGDNRLYFGMYEVWSGKWKGGLKIHHAFVE 180

[Close]

BLAST of Lsi02G010410 vs. NCBI nr
Match: gi|778664566|ref|XP_011660312.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis sativus])

HSP 1 Score: 213.0 bits (541), Expect = 4.3e-52
Identity = 102/175 (58.29%), Postives = 126/175 (72.00%), Query Frame = 1


Query: 7   SSPHFNGDPKAIEKIKNQKTIIYPNSFTITWGNDNRYWR-LPRQSRSF--AAAELLQVSW 66
           S PH + DP+AIE  K  K I YP + TITWGNDNRYWR LP  +     +A +LLQVSW
Sbjct: 5   SKPHSDADPRAIEITKGGKMIFYPRALTITWGNDNRYWRFLPSTNLKDPKSAVQLLQVSW 64

Query: 67  LEVTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDARC- 126
           LEVTCSTD VEAG++Y+VGFN+S+   AFGW   EV+IMAK+GK G + +KK     R  
Sbjct: 65  LEVTCSTDKVEAGQTYKVGFNVSLQPDAFGWDDVEVFIMAKVGKKGTYFFKKTSFGKRLG 124

Query: 127 SDQNKFNIPEDDLIITVKPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV 178
           +   KF++P++ L I +  P SSPGD  LYFG+YEVWSG+WKGGL+IH AFVEKV
Sbjct: 125 TSSKKFSVPDEGLEIKIVAPQSSPGDCSLYFGLYEVWSGKWKGGLQIHDAFVEKV 179

[Close]

BLAST of Lsi02G010410 vs. NCBI nr
Match: gi|659118310|ref|XP_008459054.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo])

HSP 1 Score: 175.6 bits (444), Expect = 7.6e-41
Identity = 90/173 (52.02%), Postives = 113/173 (65.32%), Query Frame = 1


Query: 9   PHFNGDPKAIEK-IKNQKTIIYPNSFTITWGNDNRYWRL--PRQSRSFAAAELLQVSWLE 68
           PH   D  A EK +    T +YP  F ITWGND+RYW +  P    S   AEL QVSWLE
Sbjct: 6   PHREADETAKEKNVIKGITKVYPRGFNITWGNDDRYWNITNPNVPGSLYMAELKQVSWLE 65

Query: 69  VTCSTDNVEAGKSYRVGFNLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDARCSDQ 128
           VTCSTDNVE G++YRVGFN++M   AFGW G +VY+MAK+GK GKF   KV L     ++
Sbjct: 66  VTCSTDNVEVGETYRVGFNITMRPDAFGWDGIDVYVMAKVGKKGKFTSMKVSLGEIGPNE 125

Query: 129 NKFNIPEDDLIITVKPPPSSPGDNR-LYFGMYEVWSGRWKGGLKIHHAFVEKV 178
               IP++ L I V    S+P + R ++ G+YEVWS +WKGGL+IH AF+ KV
Sbjct: 126 TPITIPKEPLEIFV--AHSTPKECRTIHLGLYEVWSSKWKGGLQIHDAFIYKV 176

[Close]

BLAST of Lsi02G010410 vs. NCBI nr
Match: gi|449455437|ref|XP_004145459.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 9.9e-41
Identity = 82/154 (53.25%), Postives = 101/154 (65.58%), Query Frame = 1


Query: 26  TIIYPNSFTITWGNDNRYWRL--PRQSRSFAAAELLQVSWLEVTCSTDNVEAGKSYRVGF 85
           T +YP  F ITWGND+RYW +  P    S   AEL QVSWLEVTCSTDNVE GK YRVGF
Sbjct: 25  TKVYPTGFNITWGNDDRYWNITKPNVPGSLYVAELKQVSWLEVTCSTDNVEVGKYYRVGF 84

Query: 86  NLSMTMAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDARCSDQNKFNIPEDDLIITVKPPP 145
           N++M   AFGW G +VY+MAK+GK GKF   KV L+    D     IP+  L I V P  
Sbjct: 85  NITMKPDAFGWNGIDVYVMAKVGKKGKFTSMKVSLEEIKPDNIPITIPKKPLEIFVNPVT 144

Query: 146 SSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV 178
                + ++ G+YEVWS +WKGG++IH AF+ +V
Sbjct: 145 PEECRSTIHLGLYEVWSSKWKGGMQIHDAFIHRV 178

The following BLAST results are available for this feature:

BLAST of Lsi02G010410 vs. Swiss-Prot


Match Name	E-value	Identity	Description
P2A09_ARATH	2.9e-32	41.30	Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana GN=PP2A9 PE=2 SV=1	[more]

BLAST of Lsi02G010410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYD1_CUCSA	4.1e-86	83.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G703580 PE=4 SV=1	[more]
A0A0A0M0V4_CUCSA	3.0e-52	58.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G703570 PE=4 SV=1	[more]
A0A0A0LYR0_CUCSA	6.9e-41	53.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G708660 PE=4 SV=1	[more]
A0A067JJY8_JATCU	3.2e-38	51.76	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00140 PE=4 SV=1	[more]
W9S3K5_9ROSA	1.8e-36	46.84	Uncharacterized protein OS=Morus notabilis GN=L484_018467 PE=4 SV=1	[more]

BLAST of Lsi02G010410 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31200.1	1.6e-33	41.30	phloem protein 2-A9	[more]
AT1G10155.1	2.8e-33	39.33	phloem protein 2-A10	[more]

BLAST of Lsi02G010410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118304\|ref\|XP_008459052.1\|	6.3e-88	85.33	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo]	[more]
gi\|778664568\|ref\|XP_011660313.1\|	5.9e-86	83.70	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis sativus]	[more]
gi\|778664566\|ref\|XP_011660312.1\|	4.3e-52	58.29	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis sativus]	[more]
gi\|659118310\|ref\|XP_008459054.1\|	7.6e-41	52.02	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo]	[more]
gi\|449455437\|ref\|XP_004145459.1\|	9.9e-41	53.25	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025886	PP2-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G010410.1	Lsi02G010410.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 25..171 score: 2.6
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 9..179 score: 1.3
None	No IPR available	PANTHER	PTHR32278:SF8	PHLOEM PROTEIN 2-A10-RELATED	coord: 9..179 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G010410	Cucumber (Gy14) v2	cgyblsiB030
Lsi02G010410	Melon (DHL92) v3.6.1	lsimedB190
Lsi02G010410	Silver-seed gourd	carlsiB874
Lsi02G010410	Cucumber (Chinese Long) v3	cuclsiB034
Lsi02G010410	Watermelon (97103) v2	lsiwmbB153
Lsi02G010410	Wax gourd	lsiwgoB255
Lsi02G010410	Cucurbita maxima (Rimu)	cmalsiB207
Lsi02G010410	Cucurbita maxima (Rimu)	cmalsiB369
Lsi02G010410	Cucurbita moschata (Rifu)	cmolsiB197
Lsi02G010410	Cucurbita moschata (Rifu)	cmolsiB356
Lsi02G010410	Cucurbita pepo (Zucchini)	cpelsiB026
Lsi02G010410	Cucurbita pepo (Zucchini)	cpelsiB417
Lsi02G010410	Wild cucumber (PI 183967)	cpilsiB034
Lsi02G010410	Cucumber (Chinese Long) v2	culsiB033
Lsi02G010410	Melon (DHL92) v3.5.1	lsimeB180
Lsi02G010410	Watermelon (Charleston Gray)	lsiwcgB169
Lsi02G010410	Watermelon (Charleston Gray)	lsiwcgB177
Lsi02G010410	Watermelon (97103) v1	lsiwmB206