Lsi02G006980 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi02G006980
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr02 : 6224517 .. 6230554 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTGCCTTATCCACTTAGAAGTGAGGGGAAAATAATAATACAAGCCTTTTGACTTTCATCTATCCCAGTGTGAAAAGGAGCAATTTACTGAAGTTTCATAAGAAATTACACCCTTATCGACTAATATAAATATAATATATTTTTTAAAAAAGCTCTAATTATGAAAAAGTGGACCTGTTGAACTAGGATGTTGTTTCGTCCTTTGTTCGTGTTTTAGTAATCTATTCATTTCTTTCACCTAGCTTGAAATTTGAATGTATAGGTGATTATCGAAGTTAGAACATGATATTATCTTCGATATTGATGCCAATTTGAATACAATTCAACCGTTTAAAATATATATACTATTAGAATGTTTATTTCACATATTGTTAAAAAAAACGACCAAGATTTGAAATTGATTGATTTGATTTTAACCTATAGCAAGTTAAGCATGTATTCGATTACATATTGTATCATCTCAATGTAGTAAGAGAAGAAAAATGGTGTATGGGTGGATTCACAATCGGATTGAGCTTCTTACATATACAAAATTAATAAGTATTTGCCAACTACCTTGCGAAAATATACTTTAGACATATGACACATACTTCGATCTAAGCAAGCAACAAACTTTTTACGATGAGGACAATAAAACCTCCAACTATCTCCATAATTTATCAAAGATCTCTCTATTCCTTAATCCATATGGAATTATTGTTTTGTTGGAATACCTTGAATCTGATATGTGTGAGTTTCAAACGACTAAGTTATTTACGTATTTGTCATCTTTACGTTATTTACATTTATGACCCTAGGGTTTAGAGAGGTGCATTATATAAACTCTCTAAACCTCTCTAAACCCTAGAGATGCTTCAATTCTATAATCCGCATTATTTTCTCTAATAATACTTGTCTTTCTCTTTCTCCATGGACGTAGCGAACACGTTGTTAGTGAACCACGTAAATCTTTGTATTGATCTCTTTTATTTTACATTTTCTGTATATCTTAATTTGATTGTCGATTCTTAACCAGTTTCACCTAACACTTACAATGCCCAAGTTTTCTACCATATGACTTTATATATAGTAAACTTCCTCCTTGTTGGGATTTATCTATTTAAATGCAACTTCCATGTAATATTAGTATCTTTAAAAAAGGACTAGGTATATAATATTTTTTATTCTCTAACTAAAAATTTGTTGAATTCTTCAATCACACTTAACCATTACTCAACATTTTGACCTAACCGTTGGAGTAGCTTCAACAAACACCACATTGGTATAAGTGAAACACTCTACCATTCATTTTCTCTCTTATAGCTTCTTGAAAACTATAACAGACGATAGATCTTTCACATATGATTGATACAATACCAATAACTATTTAATATATTCAATAAAAAACAAATCAACTCAATTTTTGGATGACCAATCAAACTTGCTATAAGGCCATAATAATAAATAACCTCACACCTTCCATGGAAGACAATTTTGTATTCTGACTTTTACAAGATATTAAAGTATATAGCTAGTAAAAACTAATTAAAAAGTCAATTTTCACTAACAAATTTGAGGAAAATAAAGTCCCTAGTCCCTAGAGATCTGAAAAGTAAAAAATGAAAATGTGAATACAAAGAGTAAAAATTACAAGTGGGGTGCAAAAGTTGGACGAATTGAATATCATATAATTGGCAGACAATGTGAACATGCATGAACATGCATATTTTGTACGAACAAACATTAATAACAATCACTACTAATTGCTAAAATCTCCTCTAATTGTTTAGGTATATCTCTTGCATTGCGGCTGCGGCCTTCTGTCTTGTTTGCATCATTATATTTCAATTTTTTCAAACCTCCTTCTTCATAATTGAACTCACTAATTATTGTATCTCTTCTGGATTTTCCTTTTTTTTTTTTTTTTTTTTTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTAATATTATCTCTTTTCTCTTCTTACTTCTTTTAAAATATATAATACATAATTGGCTATCCTAAGAATTATCAAGATTATTACTGCAATTGTAAATATTTTGCACTTGGATATTGAAGATCAATATGAATCTAAGAAGATTTAACGTGTTGTTTTCTCGGGAAGATTTAACTCATAATGCATGGCTATTTGCAAATGTAAATATTTTTTATAGAAGGGATTAAAAGTAAAATTGTGTCACATTGTTGATCTTCTAAAAGTATATATTTAAAGTAGGATAAAGATAATATCTAAGGTAAGCCATATGTCATTTTGTCGTCATATTGAAAGAAGAGACGAAAGAAATTTTAAAAGAAGGAAGATTAAAACTCTTTGTTTAACTTTGGATTCGTAAGCAAATGAATTCAAACATTTTCTGTCCTATGCATAATTTGGTGGGGGCTCAATTTATTGAGTCTAAGCCGACAATGACAATAAAAATAAAAATAAAAATGAAAATGAAAGGATAAATATGAATCGGCCCATTTGTCTCTCTCTTTCTTTCATTTTCTGTCTGTCGACCGCCCAAGAAATTTAGTTCCTTTAGTTTTTAGAATGTCAACCCCTTTAAAGTTTGTAAATGTCTTACATGACTTTGTTGATCATCTCTGTCTCTCTCAACTTTGTTTCTGTTCTTCAGTTTAATTTAAACTTATGTTGGAAATTTTCCAATTAAATCTTATGGAGCCAATTTTAATAAATAAGAAGAGTAAACTAAAATTAGTTTAAATTTTCAAACTTTTTAATGTAACACTTATGATTTTTTAAGGTCAATTGCCAACCTTACTAACTTTTCTTTATATATATATGTTTCTAAAAGGATGATATAATTTCCAGGTTTGGATGACAAACTTTTGACTCCAAAATTGTCATGATCAATCTTGATAATTACTTTCTGGTGCACAAAGAAAAGTTAATCATTTGTAGGCATTGAGAATTGGGTTCTTGTTGTCTGCTTTTCGTTTTAGTACTTCTAGAATGTAACATTTTCCCTGCCTTTCAAAATTTTGAAACTTATGGCTGAGTGAAAGACATTCACAATTAAGAATTATAAAGAGTTAATTTATAATAAATATCAGTGATATATAATTAAATTTGCTTTTATTCACTAGCTTAAGTTTTTTAGTCAATCGATAATTTAAGATTATATCAGAGCACAACATTGCTTCCTTCCCAATTAATATCATTTTCACTTGTTGGACATTCTTCATATTTCAAGCCCACAAGTGAGGGGAGTGTTAGTGATATATAATTAAATTTGTCTTTACCCACTAGCTTAAGAATAAATTTAAGACTCACCCTAACTTTGAGATTTGTGTCAAGCACATCGCTAATAGAAGACTATTAGCGATAGAGTCTATCAATGATAGATTTGCGTTATATTTGCAATTCTTTTAAAATGTTGTTATACACTTAATTATTAGTCTTAAAAGTGTTATCCTTTGCATTGCAATTACCCTTTTAAGAGAAAATATCTAAAAGGTCTTCAAACTTGTAATTTTATGCCTAATATATATAATATAGATCCATGAATTTTCCAATTTTGTATTTTTTAACGCATTCACTTGTTGAATATATTTTTAAAACTATTGGATCTACTAGACAAAAGATTAGAAGGTTTAGATTCCATTAGTAAAAAATATTAAATTTATATCGTCTAATACATCATTAAATACTTAAAAATTTTGAATATATCAAAGATATATATTAGACACATAATTAAAAGTTTAGAGACATATTAGACATTTTTAAAGTTGAAGAATCAATTTTGATACAGAATTAAACTTTATAGGCAAATTTTGAAGTCTAAGAACTAAACTTATAATTTTAGAAATAATTCACATGAAGGATGATGATTATAACCCTATATAATCATATATGAATGAGGAATTTTTAAAAATAGAAAAATAAGGGAAACTATTTACACAAAATATTAAAATTTTTAGATAGTTGTGATAGACGCGGATAGAAGTCTATCAGAGTCTATCAGTGATAAAAATGATAGAAATCTATCACTGATAGATGCTGATAGAAGTCTATTAATGTTTATCAATATTTTTTTTTTGTTGCTATTTTCTATAAATAGTTGACATTTTTTCTATTTAGAGAAATTTCTCTATATGGATCTTACTATTTGCATTTTTCTGGTAATGTCGTCCCATCTTCCATTTTCTTTTCTAAGTTAAAGAAGAGAAAAAATAATAGCACTTGATAATAAAATAGTAGAAAAATTTCAAAGTTTTCGTTGACAATATATTTTTGGTTATCTAAATATATGGATGTGTGTATATTATCCGTTTTAATTCTATTCATGTTCATTAGTATGTTTATATATAGTCATAGTTAAAAGTAGGAAAATCACTTATATTCATTAGTATGTTTTATATATGATCATGGTTAAAAGTAGTATTAGTGTCTATTACTATCTATTAATAACATTTTTACTATATTTATAAATAAGTTGGTTCATTTTGCTATATTTAAAACCAACCCTTAAAAGTATTATTTTTTCAAAAAGTAAAAAAGATATCTACGTATGGGAATTCAATCTACTTAATTGATTTTATTTTATGTCTTCCCTAAAGAAAGATAAATAATGTTATAATTTAAAAACGACACAATTTCATATAAAAATTTGATCGTGTGGGCTTAAAACTTAGAAAATACTTCTCCATTTGAGCCTAAAAGAATTAATTATCATCTCTAAGGTGGATTATTCAATCCCCTATTCGAATGATTATAGTCAAGGAAGTTGGATAGTAGGAGAAATGAAGCTGGAGGAACCTACTAGTGTTGAACTCCAAAGACACAGAAGTTAGCAAACTTAAGCCCAATCCTCTTCAAAGAAGGCCCATAAGTTACTATTATGGGGCCTGGCCTTTCATCTGAAATATGCATACCCATCTTTTCTTCTTAATTTAATTTTCATTTGAAATTAAACATAAAAGCTATTGCTGTTTATGAAATGAAACATAATCTAGAATTTTTAATAATATTGCACAAAAATGAACTTTTTTTTTTGTCGCCCCCTGCAGAGGACATATTTGCATGTTTTGCTTTTATTTCTATTCTCACTCTGGCTGCACTACAACAATTTAACCTTTAAATATCAATTCTAAACTAATATCATATATATATATATATATGTGTATTTTATAAAAACTATAAAGTCTCTTAATCTATTTAATGTTAAGATTCTCAACATGTCTTTTTGAACTCATTTTTGAATCACATTCCATTAAATACTTGTTTGAATTTTAACTCAGTTATAATGTAGATAAAGTGAGAATGAAACTTCATATTCAAGACGATATCTATAAGTTATTTCTATCTTTATTAATTTAATTTTGAGAATGAAACTTTACCCCATATAGCTGATGAGGTGGGTGGTCTAGGGTCGTCCATTTTAACATGATTTATTCTGTGGAAATATAATTTTCAGAATTTATTATTGTAAGTGGCGTGAGAAAAAAAATTGATTCTAAATTAAGATCGATTAGGATGGGGTTAGTTAGAACTTAGAATAAAAGAGAGGAAGCCGACCATTGGCACTAAAGAAAACATTTTGTACCGGCAAATGTGGCAGAAGAGGACACGTGTTTAGAAAACAGCATGATAGTGAGCAAGCCGATTGCCAAATCATCAAACCAAATTGCTACGTGTCATAATTCTAATTCTCCCACTAAACCCATAGCACAAAAATGTATACAAAAGAACGAGTCTGTCAAAATACACAACAAAAAAGAAAACCAAAGAACCAAACACCCAATAGGAAAAAGAAGTAA

mRNA sequence

ATGGACTGCCTTATCCACTTAGAAGATGTTGTTTCGTCCTTTGTTCGTGTTTTAGTAATCTATTCATTTCTTTCACCTAGCTTGAAATTTGAATGTATAGGTGATTATCGAATACTTCTAGAATTCATAGTTAAAAAATTTATTATTGTAAGTGGCGTGAGAAAAAAAATTGATTCTAAATTAAGATCGATTAGGATGGGCACAAAAATGTATACAAAAGAACGAGTCTGTCAAAATACACAACAAAAAAGAAAACCAAAGAACCAAACACCCAATAGGAAAAAGAAGTAA

Coding sequence (CDS)

ATGGACTGCCTTATCCACTTAGAAGATGTTGTTTCGTCCTTTGTTCGTGTTTTAGTAATCTATTCATTTCTTTCACCTAGCTTGAAATTTGAATGTATAGGTGATTATCGAATACTTCTAGAATTCATAGTTAAAAAATTTATTATTGTAAGTGGCGTGAGAAAAAAAATTGATTCTAAATTAAGATCGATTAGGATGGGCACAAAAATGTATACAAAAGAACGAGTCTGTCAAAATACACAACAAAAAAGAAAACCAAAGAACCAAACACCCAATAGGAAAAAGAAGTAA

Protein sequence

MDCLIHLEDVVSSFVRVLVIYSFLSPSLKFECIGDYRILLEFIVKKFIIVSGVRKKIDSKLRSIRMGTKMYTKERVCQNTQQKRKPKNQTPNRKKK
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G006980.1Lsi02G006980.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi02G006980Wild cucumber (PI 183967)cpilsiB021
Lsi02G006980Wild cucumber (PI 183967)cpilsiB444
Lsi02G006980Wild cucumber (PI 183967)cpilsiB522
Lsi02G006980Cucumber (Chinese Long) v2culsiB022
Lsi02G006980Cucumber (Chinese Long) v2culsiB438
Lsi02G006980Cucumber (Chinese Long) v2culsiB507
Lsi02G006980Melon (DHL92) v3.5.1lsimeB179
Lsi02G006980Melon (DHL92) v3.5.1lsimeB204
Lsi02G006980Melon (DHL92) v3.5.1lsimeB228
Lsi02G006980Watermelon (Charleston Gray)lsiwcgB170
Lsi02G006980Watermelon (Charleston Gray)lsiwcgB184
Lsi02G006980Watermelon (97103) v1lsiwmB184
Lsi02G006980Watermelon (97103) v1lsiwmB200
Lsi02G006980Watermelon (97103) v1lsiwmB215
Lsi02G006980Cucumber (Gy14) v2cgyblsiB018
Lsi02G006980Cucumber (Gy14) v2cgyblsiB163
Lsi02G006980Melon (DHL92) v3.6.1lsimedB189
Lsi02G006980Melon (DHL92) v3.6.1lsimedB233
Lsi02G006980Melon (DHL92) v3.6.1lsimedB239
Lsi02G006980Silver-seed gourdcarlsiB135
Lsi02G006980Silver-seed gourdcarlsiB798
Lsi02G006980Silver-seed gourdcarlsiB824
Lsi02G006980Silver-seed gourdcarlsiB848
Lsi02G006980Silver-seed gourdcarlsiB866
Lsi02G006980Cucumber (Chinese Long) v3cuclsiB022
Lsi02G006980Cucumber (Chinese Long) v3cuclsiB194
Lsi02G006980Cucumber (Chinese Long) v3cuclsiB465
Lsi02G006980Watermelon (97103) v2lsiwmbB154
Lsi02G006980Watermelon (97103) v2lsiwmbB163
Lsi02G006980Watermelon (97103) v2lsiwmbB176
Lsi02G006980Wax gourdlsiwgoB234
Lsi02G006980Wax gourdlsiwgoB244
Lsi02G006980Bottle gourd (USVL1VR-Ls)lsilsiB049
Lsi02G006980Bottle gourd (USVL1VR-Ls)lsilsiB066
Lsi02G006980Bottle gourd (USVL1VR-Ls)lsilsiB098
Lsi02G006980Bottle gourd (USVL1VR-Ls)lsilsiB107
Lsi02G006980Cucumber (Gy14) v1cgylsiB023
Lsi02G006980Cucumber (Gy14) v1cgylsiB194
Lsi02G006980Cucurbita maxima (Rimu)cmalsiB020
Lsi02G006980Cucurbita maxima (Rimu)cmalsiB207
Lsi02G006980Cucurbita maxima (Rimu)cmalsiB369
Lsi02G006980Cucurbita maxima (Rimu)cmalsiB414
Lsi02G006980Cucurbita maxima (Rimu)cmalsiB479
Lsi02G006980Cucurbita maxima (Rimu)cmalsiB608
Lsi02G006980Cucurbita maxima (Rimu)cmalsiB796
Lsi02G006980Cucurbita moschata (Rifu)cmolsiB008
Lsi02G006980Cucurbita moschata (Rifu)cmolsiB197
Lsi02G006980Cucurbita moschata (Rifu)cmolsiB356
Lsi02G006980Cucurbita moschata (Rifu)cmolsiB399
Lsi02G006980Cucurbita moschata (Rifu)cmolsiB596
Lsi02G006980Cucurbita moschata (Rifu)cmolsiB786
Lsi02G006980Cucurbita pepo (Zucchini)cpelsiB026
Lsi02G006980Cucurbita pepo (Zucchini)cpelsiB167
Lsi02G006980Cucurbita pepo (Zucchini)cpelsiB204
Lsi02G006980Cucurbita pepo (Zucchini)cpelsiB402
Lsi02G006980Cucurbita pepo (Zucchini)cpelsiB417
Lsi02G006980Cucurbita pepo (Zucchini)cpelsiB635